View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: 11737-5_high_2 (Length: 284)

Name: 11737-5_high_2
Description: 11737-5
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] 11737-5_high_2
11737-5_high_2
[»] chr3 (23 HSPs)
chr3 (1-189)||(41848616-41848804)
chr3 (184-269)||(41849471-41849549)
chr3 (171-225)||(2153607-2153661)
chr3 (170-240)||(54775038-54775108)
chr3 (170-217)||(3182452-3182499)
chr3 (170-217)||(24605106-24605153)
chr3 (22-88)||(52323815-52323881)
chr3 (172-217)||(39971252-39971297)
chr3 (176-241)||(43116524-43116589)
chr3 (173-241)||(16790181-16790249)
chr3 (170-226)||(37788785-37788840)
chr3 (26-77)||(44014723-44014774)
chr3 (170-217)||(53457310-53457357)
chr3 (171-213)||(2128342-2128384)
chr3 (43-121)||(24624260-24624338)
chr3 (171-204)||(10101567-10101600)
chr3 (171-204)||(10212492-10212525)
chr3 (176-217)||(22667358-22667399)
chr3 (176-217)||(22723997-22724038)
chr3 (170-211)||(48364969-48365010)
chr3 (170-210)||(1395611-1395651)
chr3 (18-58)||(31403472-31403512)
chr3 (170-242)||(41028941-41029013)
[»] scaffold0590 (1 HSPs)
scaffold0590 (170-242)||(1164-1236)
[»] scaffold0275 (1 HSPs)
scaffold0275 (170-242)||(2739-2811)
[»] chr8 (23 HSPs)
chr8 (171-242)||(4558706-4558777)
chr8 (12-90)||(1664450-1664528)
chr8 (12-90)||(1892135-1892213)
chr8 (26-77)||(6950416-6950467)
chr8 (172-211)||(7714181-7714220)
chr8 (178-217)||(9928189-9928228)
chr8 (26-77)||(16162854-16162905)
chr8 (170-217)||(29056081-29056128)
chr8 (174-217)||(32506990-32507033)
chr8 (170-217)||(40728508-40728555)
chr8 (172-214)||(10939343-10939385)
chr8 (170-204)||(26820145-26820179)
chr8 (26-108)||(39881646-39881728)
chr8 (12-77)||(1889046-1889111)
chr8 (170-211)||(14949827-14949868)
chr8 (170-203)||(29699201-29699234)
chr8 (19-68)||(34290972-34291021)
chr8 (173-217)||(3945207-3945251)
chr8 (26-66)||(6496816-6496856)
chr8 (173-217)||(11188248-11188292)
chr8 (171-211)||(26215435-26215475)
chr8 (170-242)||(34563158-34563230)
chr8 (171-211)||(42597340-42597380)
[»] scaffold0199 (1 HSPs)
scaffold0199 (12-90)||(6891-6969)
[»] scaffold0141 (1 HSPs)
scaffold0141 (19-77)||(9696-9754)
[»] chr6 (15 HSPs)
chr6 (170-240)||(5328884-5328954)
chr6 (170-242)||(2514610-2514682)
chr6 (170-217)||(24836289-24836336)
chr6 (170-212)||(4420555-4420597)
chr6 (22-76)||(7351592-7351646)
chr6 (176-215)||(5554861-5554900)
chr6 (170-241)||(32975887-32975958)
chr6 (26-65)||(33737836-33737875)
chr6 (26-76)||(3738196-3738246)
chr6 (170-212)||(34544540-34544582)
chr6 (171-216)||(507154-507199)
chr6 (174-211)||(33068655-33068692)
chr6 (177-225)||(4247731-4247779)
chr6 (26-66)||(4325230-4325270)
chr6 (177-217)||(33116538-33116578)
[»] chr4 (22 HSPs)
chr4 (20-93)||(18628472-18628545)
chr4 (20-89)||(25487476-25487545)
chr4 (26-77)||(28615428-28615479)
chr4 (170-217)||(51044549-51044596)
chr4 (18-77)||(37636103-37636162)
chr4 (28-70)||(53952658-53952700)
chr4 (173-242)||(485989-486058)
chr4 (26-63)||(9720579-9720616)
chr4 (170-211)||(19422357-19422398)
chr4 (26-63)||(22662176-22662213)
chr4 (26-63)||(22666655-22666692)
chr4 (171-204)||(30024646-30024679)
chr4 (21-90)||(35743350-35743419)
chr4 (170-199)||(54277404-54277433)
chr4 (169-217)||(4798648-4798696)
chr4 (171-211)||(6364088-6364128)
chr4 (26-118)||(7367979-7368071)
chr4 (33-65)||(24087442-24087474)
chr4 (33-65)||(24091569-24091601)
chr4 (18-58)||(40174670-40174710)
chr4 (174-225)||(42641727-42641779)
chr4 (26-66)||(56186823-56186863)
[»] scaffold0024 (1 HSPs)
scaffold0024 (170-242)||(27484-27556)
[»] chr2 (16 HSPs)
chr2 (170-238)||(31461350-31461418)
chr2 (169-239)||(15173437-15173507)
chr2 (170-224)||(38239641-38239695)
chr2 (22-58)||(2416426-2416462)
chr2 (26-94)||(41170687-41170755)
chr2 (170-209)||(3458598-3458637)
chr2 (27-66)||(3673914-3673953)
chr2 (170-217)||(5045247-5045294)
chr2 (170-217)||(10143105-10143152)
chr2 (174-217)||(10150688-10150731)
chr2 (170-217)||(13864583-13864630)
chr2 (19-77)||(43985303-43985361)
chr2 (171-204)||(1939423-1939456)
chr2 (173-234)||(14209193-14209254)
chr2 (37-73)||(31739918-31739954)
chr2 (170-242)||(33197329-33197401)
[»] chr5 (20 HSPs)
chr5 (170-217)||(35135752-35135799)
chr5 (170-242)||(29115303-29115375)
chr5 (26-66)||(34198526-34198566)
chr5 (170-217)||(7096217-7096264)
chr5 (19-66)||(11615572-11615619)
chr5 (170-217)||(21782659-21782706)
chr5 (32-166)||(17258814-17258948)
chr5 (171-217)||(40048371-40048417)
chr5 (173-242)||(26516206-26516275)
chr5 (170-211)||(29117020-29117061)
chr5 (170-211)||(39128578-39128619)
chr5 (28-76)||(3618904-3618952)
chr5 (20-64)||(6392574-6392618)
chr5 (171-211)||(12407752-12407792)
chr5 (173-217)||(13224362-13224406)
chr5 (19-71)||(14706202-14706254)
chr5 (170-242)||(20982225-20982297)
chr5 (19-87)||(31723889-31723957)
chr5 (171-211)||(33459026-33459066)
chr5 (170-242)||(39257476-39257548)
[»] chr1 (20 HSPs)
chr1 (170-217)||(15360827-15360874)
chr1 (174-217)||(27140418-27140461)
chr1 (26-70)||(2522697-2522741)
chr1 (170-214)||(49517006-49517050)
chr1 (170-217)||(4200162-4200209)
chr1 (19-66)||(9602572-9602619)
chr1 (170-205)||(14737795-14737830)
chr1 (38-121)||(32515378-32515461)
chr1 (170-225)||(38651499-38651554)
chr1 (43-121)||(15581304-15581382)
chr1 (171-217)||(16982027-16982073)
chr1 (170-204)||(36641821-36641855)
chr1 (170-211)||(29007806-29007847)
chr1 (171-212)||(30815726-30815767)
chr1 (171-204)||(49557087-49557120)
chr1 (170-211)||(50319231-50319272)
chr1 (26-66)||(10199333-10199373)
chr1 (29-77)||(40413950-40413998)
chr1 (173-217)||(45769836-45769880)
chr1 (170-214)||(48830166-48830210)
[»] chr7 (14 HSPs)
chr7 (22-88)||(431395-431461)
chr7 (26-114)||(29287284-29287371)
chr7 (170-218)||(35808994-35809042)
chr7 (170-225)||(5373150-5373205)
chr7 (173-211)||(1432060-1432098)
chr7 (170-216)||(23918891-23918937)
chr7 (174-224)||(33894549-33894599)
chr7 (170-204)||(39591557-39591591)
chr7 (171-217)||(44241793-44241839)
chr7 (170-242)||(30133959-30134029)
chr7 (32-121)||(33894677-33894766)
chr7 (26-66)||(5276595-5276635)
chr7 (176-204)||(30535509-30535537)
chr7 (170-242)||(47003995-47004067)


Alignment Details
Target: chr3 (Bit Score: 181; Significance: 8e-98; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 41848616 - 41848804
Alignment:
Q  1 acttaacaacttttggttctatttagattgacttatctgagtttatctactaacataaacacttgtaagattgtttgtacgagcttatgaaaattgcata 100  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41848616 acttaacaacttttgggtctatttagattgacttatttgagtttatctactaacataaacacttgtaagattgtttgtacgagcttatgaaaattgcata 41848715  T
Q  101 agacatgtctataagctgtttcctctttactttcacaagctttccaggatactttatgaaaacagcaaagactttattttatcttttgt 189  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41848716 agacatgtctataagctgtttcctctttactttcacaagctttccaggatactttatgaaaacagcaaagactttattttatcttttgt 41848804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 269
Target Start/End: Original strand, 41849471 - 41849549
Alignment:
Q  184 ttttgttatagaagtaacttagacataaacactttcatgatatccgtttatgctataaggcataagtgcttaagtaagttgattgt 269  Q
    |||||||||||||||||||||||||||| || |||||||||| |||||||||||       |||||||||||||||||||||||||    
T  41849471 ttttgttatagaagtaacttagacataagcattttcatgataaccgtttatgct-------ataagtgcttaagtaagttgattgt 41849549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 2153661 - 2153607
Alignment:
Q  171 actttattttatcttttgttatagaagtaacttagacataaacactttcatgata 225  Q
    ||||||||||||||||||||||| | |||||||| |||||||||||| |||||||    
T  2153661 actttattttatcttttgttatacacgtaacttatacataaacacttacatgata 2153607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 240
Target Start/End: Complemental strand, 54775108 - 54775038
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaacactttcatgatatccgtttatgctata 240  Q
    ||||||||||||||||||||||||||| ||||||| || ||| |||||| ||||||  | |||||||||||    
T  54775108 gactttattttatcttttgttatagaaataacttaaacgtaagcacttttatgataatcatttatgctata 54775038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 3182452 - 3182499
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaacactt 217  Q
    ||||||||||||||||||  ||||||||||||||| ||||||||||||    
T  3182452 gactttattttatctttttctatagaagtaacttatacataaacactt 3182499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 24605106 - 24605153
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaacactt 217  Q
    |||||||||| |||||||||||||||| ||||||| ||||||||||||    
T  24605106 gactttatttcatcttttgttatagaaataacttatacataaacactt 24605153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 52323815 - 52323881
Alignment:
Q  22 tttagattgacttatctgagtttatctactaacataaacacttgtaagattgtttgtacgagcttat 88  Q
    ||||||||||||||  |||||| |||||||||||||| |||||| |||| |||||||  ||||||||    
T  52323815 tttagattgacttaattgagttgatctactaacataagcacttgcaagactgtttgtgagagcttat 52323881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 39971297 - 39971252
Alignment:
Q  172 ctttattttatcttttgttatagaagtaacttagacataaacactt 217  Q
    |||||||||||||||||||||| |||||||||| |||||| |||||    
T  39971297 ctttattttatcttttgttatataagtaacttatacataagcactt 39971252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 241
Target Start/End: Original strand, 43116524 - 43116589
Alignment:
Q  176 attttatcttttgttatagaagtaacttagacataaacactttcatgatatccgtttatgctataa 241  Q
    ||||||||||||||||||||| || |||| ||||||||||||  ||||||  | ||||||||||||    
T  43116524 attttatcttttgttatagaaatagcttacacataaacacttgtatgataaacatttatgctataa 43116589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 16790181 - 16790249
Alignment:
Q  173 tttattttatcttttgttatagaagtaacttagacataaacactttcatgatatccgtttatgctataa 241  Q
    |||||||||||||||||||||||| ||||||| | |||| |||||  ||||||  || |||||||||||    
T  16790181 tttattttatcttttgttatagaaataacttatatataagcacttatatgataaacgcttatgctataa 16790249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 226
Target Start/End: Complemental strand, 37788840 - 37788785
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaacactttcatgatat 226  Q
    |||||||||||||||||||||||| || ||||||| ||||||||||||  |||||||    
T  37788840 gactttattttatcttttgttata-aaataacttatacataaacacttgtatgatat 37788785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 44014723 - 44014774
Alignment:
Q  26 gattgacttatctgagtttatctactaacataaacacttgtaagattgtttg 77  Q
    ||||| ||||| ||||||||||||||| ||||||||||||| ||| ||||||    
T  44014723 gattggcttatttgagtttatctactagcataaacacttgtgagactgtttg 44014774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 53457357 - 53457310
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaacactt 217  Q
    ||||||||||||||||||||||| |||||| |||| || |||||||||    
T  53457357 gactttattttatcttttgttatcgaagtagcttatacgtaaacactt 53457310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 213
Target Start/End: Original strand, 2128342 - 2128384
Alignment:
Q  171 actttattttatcttttgttatagaagtaacttagacataaac 213  Q
    |||||||||||||||||||||||||| || |||| ||||||||    
T  2128342 actttattttatcttttgttatagaaatagcttatacataaac 2128384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 24624338 - 24624260
Alignment:
Q  43 ttatctactaacataaacacttgtaagattgtttgtacgagcttatgaaaattgcataagacatgtctataagctgttt 121  Q
    ||||||||| |||| | ||||||||||| |||||| | |||||||||||||  || || |||||||| |||| ||||||    
T  24624338 ttatctactcacattagcacttgtaagactgtttggaagagcttatgaaaacagcttatgacatgtccataaactgttt 24624260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 204
Target Start/End: Original strand, 10101567 - 10101600
Alignment:
Q  171 actttattttatcttttgttatagaagtaactta 204  Q
    |||||||||||||||||||||||||| |||||||    
T  10101567 actttattttatcttttgttatagaaataactta 10101600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 204
Target Start/End: Original strand, 10212492 - 10212525
Alignment:
Q  171 actttattttatcttttgttatagaagtaactta 204  Q
    |||||||||||||||||||||||||| |||||||    
T  10212492 actttattttatcttttgttatagaaataactta 10212525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 22667399 - 22667358
Alignment:
Q  176 attttatcttttgttatagaagtaacttagacataaacactt 217  Q
    |||||||||||||||||||||||| |||| |||||| |||||    
T  22667399 attttatcttttgttatagaagtagcttaaacataagcactt 22667358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 22724038 - 22723997
Alignment:
Q  176 attttatcttttgttatagaagtaacttagacataaacactt 217  Q
    |||||||||||||||||||||||| |||| |||||| |||||    
T  22724038 attttatcttttgttatagaagtagcttaaacataagcactt 22723997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 48364969 - 48365010
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataa 211  Q
    ||||||||||||||||||||||| ||| ||||||| ||||||    
T  48364969 gactttattttatcttttgttatcgaaataacttatacataa 48365010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 1395651 - 1395611
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacata 210  Q
    ||||||||||||||||||||||||||| || |||| |||||    
T  1395651 gactttattttatcttttgttatagaaatagcttatacata 1395611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 31403512 - 31403472
Alignment:
Q  18 tctatttagattgacttatctgagtttatctactaacataa 58  Q
    ||||||||||||||||||  |||| ||||||||||||||||    
T  31403512 tctatttagattgacttacttgagcttatctactaacataa 31403472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 242
Target Start/End: Original strand, 41028941 - 41029013
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaacactttcatgatatccgtttatgctataag 242  Q
    ||||||||||| ||||||||||||||| || |||| |||||| |||||  ||||||  | |||| ||||||||    
T  41028941 gactttattttttcttttgttatagaaatagcttatacataagcacttatatgataagcatttaagctataag 41029013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 242
Target Start/End: Original strand, 1164 - 1236
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaacactttcatgatatccgtttatgctataag 242  Q
    ||||||||||||||||||||||||||| || |||| |||||| |||||  ||||||  |||||||||||||||    
T  1164 gactttattttatcttttgttatagaaatagcttatacataagcacttatatgatagacgtttatgctataag 1236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 242
Target Start/End: Complemental strand, 2811 - 2739
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaacactttcatgatatccgtttatgctataag 242  Q
    ||||||||||||||||||||||||||| || |||| |||||| |||||  ||||||  |||||||||||||||    
T  2811 gactttattttatcttttgttatagaaatagcttatacataagcacttatatgatagacgtttatgctataag 2739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 4558777 - 4558706
Alignment:
Q  171 actttattttatcttttgttatagaagtaacttagacataaacactttcatgatatccgtttatgctataag 242  Q
    ||||||||||||||||| |||||||| || |||| |||||||||||| ||| |||  |||||||||||||||    
T  4558777 actttattttatcttttattatagaaatagcttatacataaacacttacataataaacgtttatgctataag 4558706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 1664528 - 1664450
Alignment:
Q  12 tttggttctatttagattgacttatctgagtttatctactaacataaacacttgtaagattgtttgtacgagcttatga 90  Q
    ||||| ||| ||||||| ||||||| ||||||||||||||| ||||||||||||| ||| ||||||   ||||||||||    
T  1664528 tttgggtctgtttagatggacttatttgagtttatctactagcataaacacttgtgagactgtttgggagagcttatga 1664450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 1892135 - 1892213
Alignment:
Q  12 tttggttctatttagattgacttatctgagtttatctactaacataaacacttgtaagattgtttgtacgagcttatga 90  Q
    ||||| ||| ||||||||||||||| |||||||||||||   ||||||||||||| ||||||||||   ||||||||||    
T  1892135 tttgggtctgtttagattgacttatttgagtttatctaccgtcataaacacttgtgagattgtttggcagagcttatga 1892213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 6950467 - 6950416
Alignment:
Q  26 gattgacttatctgagtttatctactaacataaacacttgtaagattgtttg 77  Q
    ||||||||||| ||||||||||||||  |||||||| |||| ||||||||||    
T  6950467 gattgacttatttgagtttatctactggcataaacatttgtgagattgtttg 6950416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 211
Target Start/End: Complemental strand, 7714220 - 7714181
Alignment:
Q  172 ctttattttatcttttgttatagaagtaacttagacataa 211  Q
    |||||||||||||||||||||||| |||||||| ||||||    
T  7714220 ctttattttatcttttgttatagatgtaacttatacataa 7714181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 217
Target Start/End: Complemental strand, 9928228 - 9928189
Alignment:
Q  178 tttatcttttgttatagaagtaacttagacataaacactt 217  Q
    ||||||||||||||||||| ||||||| ||||||||||||    
T  9928228 tttatcttttgttatagaaataacttatacataaacactt 9928189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 16162905 - 16162854
Alignment:
Q  26 gattgacttatctgagtttatctactaacataaacacttgtaagattgtttg 77  Q
    ||||| ||||| ||||||||||||||| ||||||||||||| ||| ||||||    
T  16162905 gattggcttatttgagtttatctactagcataaacacttgtgagactgtttg 16162854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 29056081 - 29056128
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaacactt 217  Q
    ||||||||||||||||||| | |||||||| |||| ||||||||||||    
T  29056081 gactttattttatcttttgctctagaagtagcttatacataaacactt 29056128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 32507033 - 32506990
Alignment:
Q  174 ttattttatcttttgttatagaagtaacttagacataaacactt 217  Q
    ||||||||||||||||| ||||| ||||||| ||||||||||||    
T  32507033 ttattttatcttttgttgtagaaataacttatacataaacactt 32506990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 40728508 - 40728555
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaacactt 217  Q
    ||||||||||||||||||||||||||| |||||||  ||| |||||||    
T  40728508 gactttattttatcttttgttatagaaataacttatgcatgaacactt 40728555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 214
Target Start/End: Complemental strand, 10939385 - 10939343
Alignment:
Q  172 ctttattttatcttttgttatagaagtaacttagacataaaca 214  Q
    |||||||||||||||||| |||||| ||||||| |||||||||    
T  10939385 ctttattttatcttttgtaatagaaataacttatacataaaca 10939343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 204
Target Start/End: Complemental strand, 26820179 - 26820145
Alignment:
Q  170 gactttattttatcttttgttatagaagtaactta 204  Q
    ||||||||||||||||||||||||||| |||||||    
T  26820179 gactttattttatcttttgttatagaaataactta 26820145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 39881646 - 39881728
Alignment:
Q  26 gattgacttatctgagtttatctactaacataaacacttgtaagattgtttgtacgagcttatgaaaattgcataagacatgt 108  Q
    ||||||||||| |||  ||||||| |  ||||||||||||| |||||||||| | |||||| ||||||| || || |||||||    
T  39881646 gattgacttatttgaacttatctattggcataaacacttgtgagattgtttggaagagcttgtgaaaatagcttatgacatgt 39881728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 1889046 - 1889111
Alignment:
Q  12 tttggttctatttagattgacttatctgagtttatctactaacataaacacttgtaagattgtttg 77  Q
    ||||| ||| ||||||| ||||||| ||||||||||||||  ||||||||||| | ||| ||||||    
T  1889046 tttgggtctgtttagatggacttatttgagtttatctactggcataaacacttttgagactgtttg 1889111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 14949868 - 14949827
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataa 211  Q
    |||| ||||||||||||||||||||||||| |||| ||||||    
T  14949868 gactctattttatcttttgttatagaagtagcttatacataa 14949827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 203
Target Start/End: Complemental strand, 29699234 - 29699201
Alignment:
Q  170 gactttattttatcttttgttatagaagtaactt 203  Q
    ||||||||||||||||||||||||||| ||||||    
T  29699234 gactttattttatcttttgttatagaaataactt 29699201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 34291021 - 34290972
Alignment:
Q  19 ctatttagattgacttatctgagtttatctactaacataaacacttgtaa 68  Q
    |||||| ||||||||| | |||||| ||||||| ||||||||||||||||    
T  34291021 ctatttcgattgacttgtttgagttcatctactgacataaacacttgtaa 34290972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 3945251 - 3945207
Alignment:
Q  173 tttattttatcttttgttatagaagtaacttagacataaacactt 217  Q
    |||||||||||||||||||| ||| ||||||| | ||||||||||    
T  3945251 tttattttatcttttgttattgaaataacttatatataaacactt 3945207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 6496816 - 6496856
Alignment:
Q  26 gattgacttatctgagtttatctactaacataaacacttgt 66  Q
    ||||||||| | ||||||||||||||||||||| |||||||    
T  6496816 gattgacttgtttgagtttatctactaacataatcacttgt 6496856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 217
Target Start/End: Original strand, 11188248 - 11188292
Alignment:
Q  173 tttattttatcttttgttatagaagtaacttagacataaacactt 217  Q
    ||||||||||||||||||||||||  |||||| |||||| |||||    
T  11188248 tttattttatcttttgttatagaaacaacttatacataagcactt 11188292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 26215475 - 26215435
Alignment:
Q  171 actttattttatcttttgttatagaagtaacttagacataa 211  Q
    |||||||||||||||||||||||||| || |||| ||||||    
T  26215475 actttattttatcttttgttatagaaatagcttatacataa 26215435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 242
Target Start/End: Complemental strand, 34563230 - 34563158
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaacactttcatgatatccgtttatgctataag 242  Q
    |||||||||||||| ||||| |||||| ||||||| | |||| |||||  ||||||   ||||||||||||||    
T  34563230 gactttattttatcctttgtcatagaaataacttatatataagcacttatatgataaatgtttatgctataag 34563158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 42597380 - 42597340
Alignment:
Q  171 actttattttatcttttgttatagaagtaacttagacataa 211  Q
    |||||||||||||||||||||||||| || |||| ||||||    
T  42597380 actttattttatcttttgttatagaaatagcttatacataa 42597340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 6969 - 6891
Alignment:
Q  12 tttggttctatttagattgacttatctgagtttatctactaacataaacacttgtaagattgtttgtacgagcttatga 90  Q
    ||||| ||| ||||||| ||||||| ||||||||||||||| ||||||||||||| ||| ||||||   ||||||||||    
T  6969 tttgggtctgtttagatggacttatttgagtttatctactagcataaacacttgtgagactgtttgggagagcttatga 6891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 9696 - 9754
Alignment:
Q  19 ctatttagattgacttatctgagtttatctactaacataaacacttgtaagattgtttg 77  Q
    ||||||||||||| |||| |||||||||||||||||||||| |||||| ||| ||||||    
T  9696 ctatttagattgatttatttgagtttatctactaacataaatacttgtgagactgtttg 9754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 240
Target Start/End: Complemental strand, 5328954 - 5328884
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaacactttcatgatatccgtttatgctata 240  Q
    ||||||||||||||||||||||||||| ||||||| || ||| |||||| ||||||  | |||||||||||    
T  5328954 gactttattttatcttttgttatagaaataacttaaacgtaagcacttttatgataatcatttatgctata 5328884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 170 - 242
Target Start/End: Complemental strand, 2514682 - 2514610
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaacactttcatgatatccgtttatgctataag 242  Q
    |||||||||||||||||| |||||||| || |||| |||||| ||||| |||||||  | |||||||||||||    
T  2514682 gactttattttatcttttattatagaaatagcttatacataagcacttacatgataagcatttatgctataag 2514610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 24836289 - 24836336
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaacactt 217  Q
    ||||||||||||||||||||||||||| ||||||| ||||||| ||||    
T  24836289 gactttattttatcttttgttatagaaataacttatacataaatactt 24836336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 212
Target Start/End: Complemental strand, 4420597 - 4420555
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaa 212  Q
    |||||||||||||||||||||||||||||| |||| |||||||    
T  4420597 gactttattttatcttttgttatagaagtagcttatacataaa 4420555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 7351592 - 7351646
Alignment:
Q  22 tttagattgacttatctgagtttatctactaacataaacacttgtaagattgttt 76  Q
    |||| |||||||||| |||||||||||||| |||||| ||||||| |||||||||    
T  7351592 tttaaattgacttatttgagtttatctactgacataagcacttgtgagattgttt 7351646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 215
Target Start/End: Original strand, 5554861 - 5554900
Alignment:
Q  176 attttatcttttgttatagaagtaacttagacataaacac 215  Q
    ||||||||||||||||||||| ||||||| ||||||||||    
T  5554861 attttatcttttgttatagaaataacttatacataaacac 5554900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 32975958 - 32975887
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaacactttcatgatatccgtttatgctataa 241  Q
    ||||||||||||| |||||||| |||| ||||||| ||||||||||||  |||| |  || |||||||||||    
T  32975958 gactttattttatattttgttacagaaataacttatacataaacacttatatgagaagcgcttatgctataa 32975887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 65
Target Start/End: Complemental strand, 33737875 - 33737836
Alignment:
Q  26 gattgacttatctgagtttatctactaacataaacacttg 65  Q
    ||||||||||| ||||||||||||||| ||||||||||||    
T  33737875 gattgacttatttgagtttatctactaccataaacacttg 33737836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 3738246 - 3738196
Alignment:
Q  26 gattgacttatctgagtttatctactaacataaacacttgtaagattgttt 76  Q
    ||||||||||| ||||||||||||||| ||||| ||||||| ||| |||||    
T  3738246 gattgacttatttgagtttatctactagcataagcacttgtgagactgttt 3738196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 212
Target Start/End: Original strand, 34544540 - 34544582
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaa 212  Q
    ||||||| ||||||||||||||||||| ||||||| |||||||    
T  34544540 gactttagtttatcttttgttatagaaataacttatacataaa 34544582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 507199 - 507154
Alignment:
Q  171 actttattttatcttttgttatagaagtaacttagacataaacact 216  Q
    |||||||||||||||||||||||||| ||| ||| |||||| ||||    
T  507199 actttattttatcttttgttatagaaataatttatacataagcact 507154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 33068655 - 33068692
Alignment:
Q  174 ttattttatcttttgttatagaagtaacttagacataa 211  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  33068655 ttattttatcttttgttatagaaataacttatacataa 33068692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 4247731 - 4247779
Alignment:
Q  177 ttttatcttttgttatagaagtaacttagacataaacactttcatgata 225  Q
    |||||||||||||||||||| || |||| |||||| ||||| |||||||    
T  4247731 ttttatcttttgttatagaaatagcttatacataagcacttacatgata 4247779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 4325230 - 4325270
Alignment:
Q  26 gattgacttatctgagtttatctactaacataaacacttgt 66  Q
    |||||||| || | |||||||||||||||||||||||||||    
T  4325230 gattgactaattttagtttatctactaacataaacacttgt 4325270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 33116578 - 33116538
Alignment:
Q  177 ttttatcttttgttatagaagtaacttagacataaacactt 217  Q
    ||||||||||||||| |||| ||||||| ||||||||||||    
T  33116578 ttttatcttttgttaaagaaataacttatacataaacactt 33116538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 18628472 - 18628545
Alignment:
Q  20 tatttagattgacttatctgagtttatctactaacataaacacttgtaagattgtttgtacgagcttatgaaaa 93  Q
    ||||||||||||| ||| |||| ||||||||| |||||||||||||| ||| ||||||   |||||||||||||    
T  18628472 tatttagattgacgtatttgagcttatctactgacataaacacttgtgagactgtttgggagagcttatgaaaa 18628545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 25487476 - 25487545
Alignment:
Q  20 tatttagattgacttatctgagtttatctactaacataaacacttgtaagattgtttgtacgagcttatg 89  Q
    ||||| |||| |||||| |||||||||||| || ||||| |||||||||||||||||| | |||||||||    
T  25487476 tattttgattaacttatttgagtttatctattagcataagcacttgtaagattgtttggaagagcttatg 25487545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 28615479 - 28615428
Alignment:
Q  26 gattgacttatctgagtttatctactaacataaacacttgtaagattgtttg 77  Q
    ||||||||||| | ||||||||||||| ||||||||||||| ||||||||||    
T  28615479 gattgacttatttaagtttatctactagcataaacacttgtgagattgtttg 28615428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 51044549 - 51044596
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaacactt 217  Q
    ||||||||||||||||||||||||||| || |||| ||||||||||||    
T  51044549 gactttattttatcttttgttatagaaatagcttatacataaacactt 51044596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 37636103 - 37636162
Alignment:
Q  18 tctatttagattgacttatctgagtttatctactaacataaacacttgtaagattgtttg 77  Q
    ||||||| |||||| |||| ||||||||||||||||||||| ||| ||||| | ||||||    
T  37636103 tctatttggattgatttatttgagtttatctactaacataagcacctgtaaaactgtttg 37636162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 70
Target Start/End: Original strand, 53952658 - 53952700
Alignment:
Q  28 ttgacttatctgagtttatctactaacataaacacttgtaaga 70  Q
    |||| |||| |||||||||| ||||||||||||||||||||||    
T  53952658 ttgatttatttgagtttatcaactaacataaacacttgtaaga 53952700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 242
Target Start/End: Complemental strand, 486058 - 485989
Alignment:
Q  173 tttattttatcttttgttatagaagtaacttagacataaacactttcatgatatccgtttatgctataag 242  Q
    |||||||||||||||||| ||||| || | || |||||| |||||| ||||||  || ||||||||||||    
T  486058 tttattttatcttttgttttagaaatagcatatacataagcacttttatgataagcgcttatgctataag 485989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 9720579 - 9720616
Alignment:
Q  26 gattgacttatctgagtttatctactaacataaacact 63  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  9720579 gattgacttatttgagtttatctactaacataagcact 9720616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 19422398 - 19422357
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataa 211  Q
    ||||||||| ||||||||||||||||| ||||||| ||||||    
T  19422398 gactttattatatcttttgttatagaaataacttatacataa 19422357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 22662176 - 22662213
Alignment:
Q  26 gattgacttatctgagtttatctactaacataaacact 63  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  22662176 gattgacttatttgagtttatctactaacataagcact 22662213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 22666655 - 22666692
Alignment:
Q  26 gattgacttatctgagtttatctactaacataaacact 63  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  22666655 gattgacttatttgagtttatctactaacataagcact 22666692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 204
Target Start/End: Complemental strand, 30024679 - 30024646
Alignment:
Q  171 actttattttatcttttgttatagaagtaactta 204  Q
    |||||||||||||||||||||||||| |||||||    
T  30024679 actttattttatcttttgttatagaaataactta 30024646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 35743419 - 35743350
Alignment:
Q  21 atttagattgacttatctgagtttatctactaacataaacacttgtaagattgtttgtacgagcttatga 90  Q
    |||||||||||||||| |||| ||||||||||| |||| || |||| ||| |||||  | ||||||||||    
T  35743419 atttagattgacttatttgagattatctactaatataagcatttgtgagactgtttagaagagcttatga 35743350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 54277404 - 54277433
Alignment:
Q  170 gactttattttatcttttgttatagaagta 199  Q
    ||||||||||||||||||||||||||||||    
T  54277404 gactttattttatcttttgttatagaagta 54277433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 4798648 - 4798696
Alignment:
Q  169 agactttattttatcttttgttatagaagtaacttagacataaacactt 217  Q
    |||||||||||||||||||| ||||||| || |||| |||||| |||||    
T  4798648 agactttattttatcttttgatatagaaatagcttatacataagcactt 4798696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 6364128 - 6364088
Alignment:
Q  171 actttattttatcttttgttatagaagtaacttagacataa 211  Q
    |||||||||||||||||||||||||| || |||| ||||||    
T  6364128 actttattttatcttttgttatagaaatagcttatacataa 6364088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 118
Target Start/End: Original strand, 7367979 - 7368071
Alignment:
Q  26 gattgacttatctgagtttatctactaacataaacacttgtaagattgtttgtacgagcttatgaaaattgcataagacatgtctataagctg 118  Q
    ||||||||||| |||||||||||||   ||||||| ||||| ||| ||||||   ||||| |||||||  || || ||||||| |||||||||    
T  7367979 gattgacttatttgagtttatctacaggcataaacgcttgtgagactgtttgggagagctcatgaaaacagcttatgacatgtttataagctg 7368071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 65
Target Start/End: Complemental strand, 24087474 - 24087442
Alignment:
Q  33 ttatctgagtttatctactaacataaacacttg 65  Q
    |||| ||||||||||||||||||||||||||||    
T  24087474 ttatttgagtttatctactaacataaacacttg 24087442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 65
Target Start/End: Complemental strand, 24091601 - 24091569
Alignment:
Q  33 ttatctgagtttatctactaacataaacacttg 65  Q
    |||| ||||||||||||||||||||||||||||    
T  24091601 ttatttgagtttatctactaacataaacacttg 24091569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 40174710 - 40174670
Alignment:
Q  18 tctatttagattgacttatctgagtttatctactaacataa 58  Q
    ||||||| |||||| |||| |||||||||||||||||||||    
T  40174710 tctattttgattgatttatttgagtttatctactaacataa 40174670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 225
Target Start/End: Original strand, 42641727 - 42641779
Alignment:
Q  174 ttattttatcttttgttatagaagtaacttagacataaacactt-tcatgata 225  Q
    ||||||||||||||||||| ||| || |||| |||||||||||| ||||||||    
T  42641727 ttattttatcttttgttatggaaatagcttatacataaacacttatcatgata 42641779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 56186823 - 56186863
Alignment:
Q  26 gattgacttatctgagtttatctactaacataaacacttgt 66  Q
    |||| ||||||  ||||||||||||||||||||||||||||    
T  56186823 gattaacttattcgagtttatctactaacataaacacttgt 56186863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 170 - 242
Target Start/End: Complemental strand, 27556 - 27484
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaacactttcatgatatccgtttatgctataag 242  Q
    |||||||||||||||| |||||||||| ||||||| |||||| ||||| |||||||   | ||||||||||||    
T  27556 gactttattttatcttctgttatagaaataacttatacataagcacttacatgataagagcttatgctataag 27484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000006; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 31461418 - 31461350
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaacactttcatgatatccgtttatgcta 238  Q
    ||||||||||||||||||||||||||| || |||| | |||| |||||  ||||||| |||||||||||    
T  31461418 gactttattttatcttttgttatagaaatagcttatatataaccacttatatgatatacgtttatgcta 31461350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 15173507 - 15173437
Alignment:
Q  169 agactttattttatcttttgttatagaagtaacttagacataaacactttcatgatatccgtttatgctat 239  Q
    ||||||||||| |||||||||||||||| ||||||| ||||| ||||||  | ||||  ||||||||||||    
T  15173507 agactttatttcatcttttgttatagaaataacttatacatagacacttgtacgataagcgtttatgctat 15173437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 38239641 - 38239695
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaacactttcatgat 224  Q
    ||||| ||||||||||||||||||||| || |||| |||||||||||| ||||||    
T  38239641 gacttgattttatcttttgttatagaaatagcttatacataaacacttacatgat 38239695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 2416462 - 2416426
Alignment:
Q  22 tttagattgacttatctgagtttatctactaacataa 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  2416462 tttagattgacttatttgagtttatctactaacataa 2416426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 41170755 - 41170687
Alignment:
Q  26 gattgacttatctgagtttatctactaacataaacacttgtaagattgtttgtacgagcttatgaaaat 94  Q
    ||||| ||||| ||||||||||||||||||||||||||||| ||| | |||| |  | |||||||||||    
T  41170755 gattggcttatttgagtttatctactaacataaacacttgtgagactatttggaataacttatgaaaat 41170687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 3458637 - 3458598
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacat 209  Q
    |||||||||||||||||||||||| || ||||||||||||    
T  3458637 gactttattttatcttttgttataaaaataacttagacat 3458598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 3673953 - 3673914
Alignment:
Q  27 attgacttatctgagtttatctactaacataaacacttgt 66  Q
    |||||||||| |||||||||| ||||||||||||||||||    
T  3673953 attgacttatttgagtttatcaactaacataaacacttgt 3673914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 5045247 - 5045294
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaacactt 217  Q
    |||||||||||||||||||||||| || || |||| ||||||||||||    
T  5045247 gactttattttatcttttgttataaaaatagcttatacataaacactt 5045294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 10143152 - 10143105
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaacactt 217  Q
    ||||| ||||||||||||||||||||| ||||||| |||||| |||||    
T  10143152 gacttaattttatcttttgttatagaaataacttatacataagcactt 10143105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 10150731 - 10150688
Alignment:
Q  174 ttattttatcttttgttatagaagtaacttagacataaacactt 217  Q
    |||||||||||||| |||||||| ||||||| ||||||||||||    
T  10150731 ttattttatcttttattatagaaataacttatacataaacactt 10150688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 13864630 - 13864583
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaacactt 217  Q
    |||||||||||| |||||||||||||| || |||| ||||||||||||    
T  13864630 gactttattttaccttttgttatagaaatagcttatacataaacactt 13864583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 43985361 - 43985303
Alignment:
Q  19 ctatttagattgacttatctgagtttatctactaacataaacacttgtaagattgtttg 77  Q
    |||||| ||| ||||||| | |||||||||||| |||||||||||||||| | ||||||    
T  43985361 ctatttggatcgacttatttaagtttatctactgacataaacacttgtaaaactgtttg 43985303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 204
Target Start/End: Original strand, 1939423 - 1939456
Alignment:
Q  171 actttattttatcttttgttatagaagtaactta 204  Q
    |||||||||||||||||||||||||| |||||||    
T  1939423 actttattttatcttttgttatagaaataactta 1939456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 234
Target Start/End: Complemental strand, 14209254 - 14209193
Alignment:
Q  173 tttattttatcttttgttatagaagtaacttagacataaacactttcatgatatccgtttat 234  Q
    |||||||||||||||||||| ||| || |||||||| ||||||||  ||||||  |||||||    
T  14209254 tttattttatcttttgttattgaaatagcttagacagaaacacttatatgataaacgtttat 14209193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 31739918 - 31739954
Alignment:
Q  37 ctgagtttatctactaacataaacacttgtaagattg 73  Q
    ||||| |||||||||||||||||||||||| ||||||    
T  31739918 ctgagcttatctactaacataaacacttgtgagattg 31739954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 242
Target Start/End: Original strand, 33197329 - 33197401
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaacactttcatgatatccgtttatgctataag 242  Q
    ||||||||| ||||||||||||||||| || |||| | |||| |||||  ||||||  |||||||| ||||||    
T  33197329 gactttattctatcttttgttatagaaatagcttatagataagcacttatatgataagcgtttatgttataag 33197401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000003; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 35135752 - 35135799
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaacactt 217  Q
    ||||||||||||||||||||||||||| || |||| ||||||||||||    
T  35135752 gactttattttatcttttgttatagaaatatcttatacataaacactt 35135799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 242
Target Start/End: Original strand, 29115303 - 29115375
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaacactttcatgatatccgtttatgctataag 242  Q
    |||||||||||| |||||||| ||||| || |||| |||||| |||||| ||||||   ||||||||||||||    
T  29115303 gactttattttaccttttgttgtagaaatagcttatacataagcacttttatgataaatgtttatgctataag 29115375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 34198566 - 34198526
Alignment:
Q  26 gattgacttatctgagtttatctactaacataaacacttgt 66  Q
    ||||||||||| ||||||||| |||||||||||||||||||    
T  34198566 gattgacttatttgagtttatttactaacataaacacttgt 34198526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 7096217 - 7096264
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaacactt 217  Q
    ||||||||||||||||||||||||||| || |||| |||||| |||||    
T  7096217 gactttattttatcttttgttatagaaatagcttatacataagcactt 7096264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 11615572 - 11615619
Alignment:
Q  19 ctatttagattgacttatctgagtttatctactaacataaacacttgt 66  Q
    |||||| ||||| ||||| |||| ||||||||||||||||||||||||    
T  11615572 ctatttggattggcttatttgagcttatctactaacataaacacttgt 11615619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 21782659 - 21782706
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaacactt 217  Q
    |||||||||||| |||||||||||||| || |||| ||||||||||||    
T  21782659 gactttattttagcttttgttatagaaatagcttaaacataaacactt 21782706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 166
Target Start/End: Original strand, 17258814 - 17258948
Alignment:
Q  32 cttatctgagtttatctactaacataaacacttgtaagattgtttgtacgagcttatgaaaattgcataagacatgtctataagctgtttcctctttact 131  Q
    ||||| |||| ||||| |||||||||| ||||||| | ||| ||||   || | ||||||||| || || |||||||  ||||||||||| |   ||| |    
T  17258814 cttatttgagcttatcaactaacataagcacttgtgacattctttgggagaacctatgaaaatagcttatgacatgttcataagctgttttcagcttatt 17258913  T
Q  132 ttcacaagctttccaggatactttatgaaaacagc 166  Q
    |||| ||||| | ||||||| ||||||||||||||    
T  17258914 ttcataagctcttcaggatagtttatgaaaacagc 17258948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 40048371 - 40048417
Alignment:
Q  171 actttattttatcttttgttatagaagtaacttagacataaacactt 217  Q
    ||||||||||||||||||||||||||  |||||| |||||| |||||    
T  40048371 actttattttatcttttgttatagaaacaacttatacataagcactt 40048417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 242
Target Start/End: Complemental strand, 26516275 - 26516206
Alignment:
Q  173 tttattttatcttttgttatagaagtaacttagacataaacactttcatgatatccgtttatgctataag 242  Q
    |||||||||||||||||| ||||| || |||| |||||| |||||  ||||||  || ||||||||||||    
T  26516275 tttattttatcttttgttttagaaatagcttatacataagcacttatatgataagcgcttatgctataag 26516206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 29117020 - 29117061
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataa 211  Q
    ||||||||||||||||||||||||||| |||| || ||||||    
T  29117020 gactttattttatcttttgttatagaaataacatatacataa 29117061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 39128619 - 39128578
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataa 211  Q
    ||||||||||||||||||||||||||| || |||| ||||||    
T  39128619 gactttattttatcttttgttatagaattagcttatacataa 39128578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 3618904 - 3618952
Alignment:
Q  28 ttgacttatctgagtttatctactaacataaacacttgtaagattgttt 76  Q
    |||| |||||||||||||||| |||||||||| |||||| ||| |||||    
T  3618904 ttgatttatctgagtttatctgctaacataaaaacttgtgagactgttt 3618952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 6392574 - 6392618
Alignment:
Q  20 tatttagattgacttatctgagtttatctactaacataaacactt 64  Q
    ||||| ||||||||||| |||||||||||||||| |||| |||||    
T  6392574 tatttcgattgacttatttgagtttatctactaatataagcactt 6392618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 12407752 - 12407792
Alignment:
Q  171 actttattttatcttttgttatagaagtaacttagacataa 211  Q
    |||||||||||||||||||||||||| || |||| ||||||    
T  12407752 actttattttatcttttgttatagaaatagcttatacataa 12407792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 13224406 - 13224362
Alignment:
Q  173 tttattttatcttttgttatagaagtaacttagacataaacactt 217  Q
    |||||||||||||||||||||||| || |||| |||||| |||||    
T  13224406 tttattttatcttttgttatagaaatagcttatacataagcactt 13224362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 14706202 - 14706254
Alignment:
Q  19 ctatttagattgacttatctgagtttatctactaacataaacacttgtaagat 71  Q
    |||||| ||||||||||| |||| ||| ||||| |||||||||||||| ||||    
T  14706202 ctatttggattgacttatttgagcttacctactgacataaacacttgtgagat 14706254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 242
Target Start/End: Original strand, 20982225 - 20982297
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaacactttcatgatatccgtttatgctataag 242  Q
    |||||||||||||| |||||||||||| || |||| |||||| |||||  ||||||  |  ||||||||||||    
T  20982225 gactttattttatcctttgttatagaaatagcttatacataagcacttatatgataagcacttatgctataag 20982297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 31723957 - 31723889
Alignment:
Q  19 ctatttagattgacttatctgagtttatctactaacataaacacttgtaagattgtttgtacgagctta 87  Q
    |||||| ||||||||||| |||| |||| ||||| ||||||||||| | ||| | |||||| |||||||    
T  31723957 ctatttggattgacttatttgagcttatgtactagcataaacacttatgagactatttgtaagagctta 31723889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 33459026 - 33459066
Alignment:
Q  171 actttattttatcttttgttatagaagtaacttagacataa 211  Q
    |||||||||| ||||||||||||||| ||||||| ||||||    
T  33459026 actttattttgtcttttgttatagaaataacttatacataa 33459066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 242
Target Start/End: Original strand, 39257476 - 39257548
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaacactttcatgatatccgtttatgctataag 242  Q
    |||||||||||| |||||||||||||  || | || |||||| ||||| |||||||   ||||||||||||||    
T  39257476 gactttattttaccttttgttatagagatagcatatacataagcacttacatgataatagtttatgctataag 39257548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000003; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 15360874 - 15360827
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaacactt 217  Q
    ||||||||||||||||||||||||||| ||||| | ||||||||||||    
T  15360874 gactttattttatcttttgttatagaaataactaatacataaacactt 15360827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 27140461 - 27140418
Alignment:
Q  174 ttattttatcttttgttatagaagtaacttagacataaacactt 217  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||    
T  27140461 ttattttatcttttgttatagaaataacttacacataaacactt 27140418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 2522741 - 2522697
Alignment:
Q  26 gattgacttatctgagtttatctactaacataaacacttgtaaga 70  Q
    ||||||||||| ||||||||||||||  |||||||||||||||||    
T  2522741 gattgacttatttgagtttatctactggcataaacacttgtaaga 2522697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 49517050 - 49517006
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaaca 214  Q
    ||||||||||||||||||||||||||| ||||||| ||| |||||    
T  49517050 gactttattttatcttttgttatagaaataacttatacacaaaca 49517006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 4200209 - 4200162
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaacactt 217  Q
    |||||||||||||||||||||||| || ||||||| | ||||||||||    
T  4200209 gactttattttatcttttgttataaaaataacttatatataaacactt 4200162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 9602572 - 9602619
Alignment:
Q  19 ctatttagattgacttatctgagtttatctactaacataaacacttgt 66  Q
    |||||| |||||||||||||||| |||||||||||| ||| |||||||    
T  9602572 ctatttggattgacttatctgagcttatctactaacttaagcacttgt 9602619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 205
Target Start/End: Original strand, 14737795 - 14737830
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttag 205  Q
    ||||||||||||||||||||||||||| ||||||||    
T  14737795 gactttattttatcttttgttatagaaataacttag 14737830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 121
Target Start/End: Original strand, 32515378 - 32515461
Alignment:
Q  38 tgagtttatctactaacataaacacttgtaagattgtttgtacgagcttatgaaaattgcataagacatgtctataagctgttt 121  Q
    ||||||||||||||||||||| ||||||| ||| ||||||   ||||||||| |||  || || |||||||| ||||| |||||    
T  32515378 tgagtttatctactaacataagcacttgtgagactgtttgggagagcttatggaaacagcgtatgacatgtcaataagttgttt 32515461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 38651499 - 38651554
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaacactttcatgata 225  Q
    ||||||| ||||||||||||||||||| || |||| |||||| ||||| |||||||    
T  38651499 gactttagtttatcttttgttatagaattagcttatacataagcacttacatgata 38651554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 15581382 - 15581304
Alignment:
Q  43 ttatctactaacataaacacttgtaagattgtttgtacgagcttatgaaaattgcataagacatgtctataagctgttt 121  Q
    ||||||||| |||||| ||||||| |||||||||| | ||||| ||| |||   | || ||||||||||||||||||||    
T  15581382 ttatctactgacataagcacttgtgagattgtttggaagagctaatggaaacaacttatgacatgtctataagctgttt 15581304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 16982027 - 16982073
Alignment:
Q  171 actttattttatcttttgttatagaagtaacttagacataaacactt 217  Q
    |||||||||||||||||||||| ||| ||| ||| ||||||||||||    
T  16982027 actttattttatcttttgttatcgaaataagttatacataaacactt 16982073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 204
Target Start/End: Complemental strand, 36641855 - 36641821
Alignment:
Q  170 gactttattttatcttttgttatagaagtaactta 204  Q
    ||||||||||||||||||||||||||| |||||||    
T  36641855 gactttattttatcttttgttatagaaataactta 36641821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 29007806 - 29007847
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataa 211  Q
    ||||||| ||| ||||||||||||||| ||||||||||||||    
T  29007806 gactttaatttttcttttgttatagaaataacttagacataa 29007847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 212
Target Start/End: Original strand, 30815726 - 30815767
Alignment:
Q  171 actttattttatcttttgttatagaagtaacttagacataaa 212  Q
    ||||||||||||||||||||||||||  | ||||||||||||    
T  30815726 actttattttatcttttgttatagaaaaagcttagacataaa 30815767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 204
Target Start/End: Complemental strand, 49557120 - 49557087
Alignment:
Q  171 actttattttatcttttgttatagaagtaactta 204  Q
    |||||||||||||||||||||||||| |||||||    
T  49557120 actttattttatcttttgttatagaaataactta 49557087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 50319272 - 50319231
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataa 211  Q
    ||||||||||||||||||||||||||| || |||| ||||||    
T  50319272 gactttattttatcttttgttatagaaatagcttatacataa 50319231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 10199333 - 10199373
Alignment:
Q  26 gattgacttatctgagtttatctactaacataaacacttgt 66  Q
    ||||||||||| |||| |||||||||||||||| |||||||    
T  10199333 gattgacttatttgagcttatctactaacataagcacttgt 10199373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 40413950 - 40413998
Alignment:
Q  29 tgacttatctgagtttatctactaacataaacacttgtaagattgtttg 77  Q
    |||||||| |||||||||| ||  |||| ||||||||||||||||||||    
T  40413950 tgacttatttgagtttatcaaccgacatcaacacttgtaagattgtttg 40413998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 217
Target Start/End: Original strand, 45769836 - 45769880
Alignment:
Q  173 tttattttatcttttgttatagaagtaacttagacataaacactt 217  Q
    |||||||||||||||||||||||| ||| ||| |||||| |||||    
T  45769836 tttattttatcttttgttatagaaataatttacacataagcactt 45769880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 48830166 - 48830210
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaaca 214  Q
    ||||||||||||||||| || |||||| ||||||| |||||||||    
T  48830166 gactttattttatctttggtaatagaaataacttatacataaaca 48830210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 431461 - 431395
Alignment:
Q  22 tttagattgacttatctgagtttatctactaacataaacacttgtaagattgtttgtacgagcttat 88  Q
    ||||||||||||||| ||||  |||||||||||||||||| |||| |||||| ||| | ||||||||    
T  431461 tttagattgacttatttgaggctatctactaacataaacatttgtgagattgattgaaagagcttat 431395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 114
Target Start/End: Complemental strand, 29287371 - 29287284
Alignment:
Q  26 gattgacttatctgagtttatctactaacataaacacttgtaagattgtttgtacgagcttatgaaaattgcataagacatgtctataa 114  Q
    |||||||| || |||||||||||| ||| ||||||||| || ||| | |||||| |||||||||||||| || || |||||||| ||||    
T  29287371 gattgactaatttgagtttatctagtaatataaacactcgtgagactatttgta-gagcttatgaaaatagcttatgacatgtccataa 29287284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 35808994 - 35809042
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaacacttt 218  Q
    |||| |||||||||||||||||||||| || |||| |||||||||||||    
T  35808994 gactatattttatcttttgttatagaaatagcttatacataaacacttt 35809042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 5373205 - 5373150
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaacactttcatgata 225  Q
    ||||||||||||||||||||||||||| || | || |||||| ||||| |||||||    
T  5373205 gactttattttatcttttgttatagaaatagcatatacataagcacttacatgata 5373150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 1432060 - 1432098
Alignment:
Q  173 tttattttatcttttgttatagaagtaacttagacataa 211  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  1432060 tttattttatcttttgttatagaaataacttatacataa 1432098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 23918937 - 23918891
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaacact 216  Q
    |||||||||||||||||||| |||||  ||||||| |||||||||||    
T  23918937 gactttattttatcttttgtaatagagataacttacacataaacact 23918891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 33894599 - 33894549
Alignment:
Q  174 ttattttatcttttgttatagaagtaacttagacataaacactttcatgat 224  Q
    ||||||||||||||||||||||| || |||| |||||| ||||| ||||||    
T  33894599 ttattttatcttttgttatagaaatagcttatacataagcacttacatgat 33894549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 204
Target Start/End: Original strand, 39591557 - 39591591
Alignment:
Q  170 gactttattttatcttttgttatagaagtaactta 204  Q
    ||||||||||||||||||||||||||| |||||||    
T  39591557 gactttattttatcttttgttatagaaataactta 39591591  T

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Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 44241839 - 44241793
Alignment:
Q  171 actttattttatcttttgttatagaagtaacttagacataaacactt 217  Q
    |||||||||||||| ||||||||||| ||||||| ||||| ||||||    
T  44241839 actttattttatctgttgttatagaaataacttatacatacacactt 44241793  T

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Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 242
Target Start/End: Complemental strand, 30134029 - 30133959
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaacactttcatgatatccgtttatgctataag 242  Q
    ||||||||||||||||||||| || || || |||| ||||||||||||  ||||||  || ||||||||||||    
T  30134029 gactttattttatcttttgttgtaaaaatagcttatacataaacactt--atgataagcgcttatgctataag 30133959  T

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Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 121
Target Start/End: Complemental strand, 33894766 - 33894677
Alignment:
Q  32 cttatctgagtttatctactaacataaacacttgtaagattgtttgtacgagcttatgaaaattgcataagacatgtctataagctgttt 121  Q
    ||||| |||| ||||| | | |||||| ||||||| ||| |||||||  |||||||||||||  ||||| |||||||| ||||| |||||    
T  33894766 cttatttgagcttatcaaatgacataagcacttgtgagactgtttgtgagagcttatgaaaacagcatatgacatgtccataagttgttt 33894677  T

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Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 5276635 - 5276595
Alignment:
Q  26 gattgacttatctgagtttatctactaacataaacacttgt 66  Q
    ||||||||||  |||| ||||||||||||||||||||||||    
T  5276635 gattgacttagatgagcttatctactaacataaacacttgt 5276595  T

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Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 204
Target Start/End: Complemental strand, 30535537 - 30535509
Alignment:
Q  176 attttatcttttgttatagaagtaactta 204  Q
    |||||||||||||||||||||||||||||    
T  30535537 attttatcttttgttatagaagtaactta 30535509  T

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Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 242
Target Start/End: Complemental strand, 47004067 - 47003995
Alignment:
Q  170 gactttattttatcttttgttatagaagtaacttagacataaacactttcatgatatccgtttatgctataag 242  Q
    ||||||||||||||| ||||||||||| || |||| | ||||||||||  ||||||  | ||| |||||||||    
T  47004067 gactttattttatctattgttatagaaatagcttacatataaacacttatatgataaacatttttgctataag 47003995  T

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