View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: 454-NF4349-Insertion-22 (Length: 107)
Name: 454-NF4349-Insertion-22
Description: 454-NF4349
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] 454-NF4349-Insertion-22 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 96; Significance: 1e-47; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 96; E-Value: 1e-47
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 48080608 - 48080711
Alignment:
| Q |
4 |
aaatagaagttcttgaatgtttataaactttgagtgtttgagtgttcattgtacacaattgatgtttcaaccttgttttgaatttttgttgggacatttg |
103 |
Q |
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| T |
48080608 |
aaatagaagttcttgattgtttataaactttgagtgtttgagtgttcattgtacacaattgatgtttcaaccttgttttgaatttttgttgggacatttt |
48080707 |
T |
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| Q |
104 |
ttag |
107 |
Q |
| |
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|||| |
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| T |
48080708 |
ttag |
48080711 |
T |
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