View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: 454-NF4349-Insertion-26 (Length: 96)
Name: 454-NF4349-Insertion-26
Description: 454-NF4349
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] 454-NF4349-Insertion-26 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 83; Significance: 7e-40; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 83; E-Value: 7e-40
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 40508850 - 40508940
Alignment:
| Q |
6 |
aatatttgaatcaaatacaagctcctttcaactagagagctcaaatacaagaataatgccaggggttcgtccagtagttgtataaggttgg |
96 |
Q |
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| T |
40508850 |
aatatttgaatcaaatacaagctcctttcaactagagagctcaaatacaagaataatgctaggggttcgtccagtagttgtagaaggttgg |
40508940 |
T |
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