View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: 454-NF4352-Insertion-2 (Length: 282)

Name: 454-NF4352-Insertion-2
Description: 454-NF4352
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] 454-NF4352-Insertion-2
454-NF4352-Insertion-2
[»] chr3 (75 HSPs)
chr3 (122-254)||(44107381-44107515)
chr3 (122-265)||(13525169-13525315)
chr3 (122-254)||(3917766-3917901)
chr3 (127-254)||(10473907-10474037)
chr3 (122-254)||(4232170-4232305)
chr3 (122-254)||(8381079-8381214)
chr3 (127-222)||(44879257-44879356)
chr3 (122-254)||(27396854-27396988)
chr3 (122-251)||(38127838-38127970)
chr3 (122-254)||(10228957-10229092)
chr3 (122-254)||(32960971-32961106)
chr3 (122-254)||(43897956-43898091)
chr3 (122-222)||(47410776-47410880)
chr3 (122-183)||(24751753-24751814)
chr3 (122-217)||(43605605-43605704)
chr3 (122-254)||(54097434-54097568)
chr3 (122-211)||(29212100-29212193)
chr3 (137-254)||(35359732-35359852)
chr3 (122-222)||(4833133-4833237)
chr3 (122-222)||(4976732-4976836)
chr3 (122-254)||(24910281-24910416)
chr3 (122-168)||(53583961-53584007)
chr3 (127-254)||(1242222-1242352)
chr3 (122-217)||(6583264-6583363)
chr3 (122-217)||(24650576-24650675)
chr3 (117-178)||(44037516-44037577)
chr3 (122-254)||(22371450-22371584)
chr3 (122-254)||(11029663-11029799)
chr3 (122-254)||(28170972-28171108)
chr3 (129-183)||(2558754-2558808)
chr3 (122-168)||(2687559-2687605)
chr3 (127-211)||(11312595-11312683)
chr3 (139-263)||(28196968-28197095)
chr3 (122-168)||(32590972-32591018)
chr3 (122-222)||(34397680-34397784)
chr3 (130-172)||(38085814-38085856)
chr3 (122-210)||(40418511-40418603)
chr3 (127-254)||(52256745-52256876)
chr3 (122-222)||(6083166-6083269)
chr3 (127-254)||(25118699-25118829)
chr3 (122-183)||(37124216-37124277)
chr3 (122-183)||(41464664-41464725)
chr3 (127-168)||(46311525-46311566)
chr3 (122-183)||(46838794-46838855)
chr3 (127-168)||(50238922-50238963)
chr3 (133-254)||(3440736-3440861)
chr3 (122-182)||(30553036-30553096)
chr3 (130-222)||(43967932-43968027)
chr3 (127-183)||(48191099-48191155)
chr3 (122-165)||(11249960-11250003)
chr3 (122-165)||(19921397-19921440)
chr3 (127-174)||(39172045-39172092)
chr3 (122-181)||(46894813-46894872)
chr3 (122-222)||(47069006-47069111)
chr3 (122-254)||(15003628-15003763)
chr3 (122-168)||(24250725-24250771)
chr3 (127-211)||(35069318-35069406)
chr3 (196-254)||(36518178-36518235)
chr3 (122-168)||(40193038-40193084)
chr3 (127-210)||(40840173-40840261)
chr3 (122-210)||(42296712-42296803)
chr3 (122-168)||(47408840-47408886)
chr3 (117-174)||(2900250-2900307)
chr3 (127-168)||(12948815-12948856)
chr3 (122-183)||(17500927-17500988)
chr3 (122-179)||(19961369-19961426)
chr3 (122-163)||(21402745-21402786)
chr3 (122-167)||(23878946-23878991)
chr3 (122-183)||(28266526-28266587)
chr3 (200-261)||(46316464-46316523)
chr3 (122-183)||(49285508-49285569)
chr3 (127-168)||(53669793-53669834)
chr3 (122-211)||(11751211-11751305)
chr3 (130-236)||(32635387-32635496)
chr3 (127-167)||(41921511-41921551)
[»] chr1 (60 HSPs)
chr1 (122-254)||(49500861-49500996)
chr1 (122-246)||(49948241-49948368)
chr1 (127-185)||(11797464-11797522)
chr1 (122-254)||(19338171-19338306)
chr1 (122-246)||(36586251-36586378)
chr1 (122-254)||(42630978-42631113)
chr1 (117-254)||(43676017-43676157)
chr1 (122-211)||(48314167-48314260)
chr1 (122-254)||(5598301-5598436)
chr1 (130-254)||(20164066-20164193)
chr1 (122-222)||(29005090-29005194)
chr1 (122-254)||(40958567-40958702)
chr1 (122-246)||(43086472-43086599)
chr1 (122-217)||(10635489-10635588)
chr1 (114-183)||(24119648-24119717)
chr1 (122-183)||(39787717-39787778)
chr1 (122-183)||(40685529-40685590)
chr1 (122-183)||(40809280-40809341)
chr1 (127-217)||(13555753-13555847)
chr1 (122-260)||(50248029-50248170)
chr1 (118-246)||(2112743-2112874)
chr1 (122-253)||(11786103-11786238)
chr1 (122-254)||(48391956-48392091)
chr1 (127-222)||(3315799-3315898)
chr1 (127-254)||(41445023-41445153)
chr1 (127-254)||(48731749-48731879)
chr1 (127-183)||(5790063-5790119)
chr1 (122-182)||(28999374-28999434)
chr1 (127-183)||(29511113-29511169)
chr1 (122-174)||(40503597-40503649)
chr1 (127-166)||(3840446-3840485)
chr1 (122-254)||(4126575-4126710)
chr1 (122-222)||(17068152-17068256)
chr1 (122-222)||(25820974-25821078)
chr1 (122-168)||(26261375-26261421)
chr1 (122-168)||(34010094-34010140)
chr1 (127-254)||(13018078-13018208)
chr1 (127-254)||(32880572-32880702)
chr1 (122-254)||(270316-270450)
chr1 (121-165)||(28381224-28381268)
chr1 (127-182)||(32947624-32947680)
chr1 (127-167)||(39467029-39467069)
chr1 (122-161)||(25083208-25083247)
chr1 (132-183)||(27078559-27078609)
chr1 (122-168)||(8214623-8214669)
chr1 (122-254)||(18089762-18089896)
chr1 (196-254)||(22561151-22561208)
chr1 (122-168)||(30455204-30455250)
chr1 (132-182)||(33845672-33845722)
chr1 (132-182)||(33948256-33948306)
chr1 (126-179)||(1800680-1800733)
chr1 (122-183)||(5322592-5322653)
chr1 (127-183)||(7204575-7204632)
chr1 (122-167)||(15906250-15906295)
chr1 (127-222)||(21522322-21522421)
chr1 (127-168)||(39522840-39522881)
chr1 (127-183)||(15104049-15104105)
chr1 (130-166)||(21897765-21897801)
chr1 (122-166)||(35010673-35010717)
chr1 (125-165)||(43500228-43500268)
[»] chr7 (55 HSPs)
chr7 (127-254)||(17895639-17895769)
chr7 (122-254)||(2228073-2228208)
chr7 (122-265)||(10060998-10061144)
chr7 (122-254)||(35157077-35157212)
chr7 (130-254)||(44327648-44327775)
chr7 (122-183)||(9379991-9380052)
chr7 (122-261)||(45041719-45041861)
chr7 (122-254)||(1323683-1323818)
chr7 (122-222)||(1573865-1573969)
chr7 (122-254)||(3497510-3497645)
chr7 (122-254)||(4106554-4106689)
chr7 (122-254)||(45236930-45237065)
chr7 (127-254)||(21226070-21226200)
chr7 (122-254)||(31299988-31300125)
chr7 (122-182)||(2354865-2354925)
chr7 (133-254)||(5508696-5508820)
chr7 (122-223)||(19306712-19306817)
chr7 (122-222)||(3861360-3861464)
chr7 (127-211)||(7312488-7312576)
chr7 (122-168)||(29151583-29151629)
chr7 (122-254)||(35849295-35849430)
chr7 (122-246)||(40809045-40809172)
chr7 (122-222)||(47584695-47584799)
chr7 (122-254)||(48612517-48612652)
chr7 (122-174)||(48729760-48729812)
chr7 (122-181)||(4887582-4887641)
chr7 (122-165)||(37117930-37117973)
chr7 (122-181)||(47459416-47459475)
chr7 (122-222)||(4069140-4069244)
chr7 (122-254)||(18944924-18945059)
chr7 (122-168)||(27396396-27396442)
chr7 (122-254)||(31717297-31717432)
chr7 (127-181)||(38261006-38261060)
chr7 (122-254)||(43723312-43723447)
chr7 (127-254)||(4674302-4674432)
chr7 (122-183)||(6596542-6596603)
chr7 (131-254)||(16816700-16816826)
chr7 (127-168)||(33512802-33512843)
chr7 (127-254)||(10166875-10167004)
chr7 (122-181)||(33228699-33228759)
chr7 (127-179)||(37410773-37410825)
chr7 (127-254)||(40656101-40656233)
chr7 (125-222)||(43133127-43133229)
chr7 (127-174)||(3043892-3043939)
chr7 (121-246)||(27339729-27339857)
chr7 (130-168)||(10703973-10704011)
chr7 (125-183)||(26336446-26336504)
chr7 (127-165)||(37919974-37920012)
chr7 (122-168)||(42557584-42557630)
chr7 (127-222)||(19258429-19258528)
chr7 (122-183)||(32251402-32251463)
chr7 (122-183)||(41780263-41780324)
chr7 (121-165)||(5841564-5841608)
chr7 (127-163)||(36280012-36280048)
chr7 (122-174)||(38930354-38930406)
[»] chr4 (69 HSPs)
chr4 (127-254)||(47462029-47462159)
chr4 (122-267)||(46488097-46488245)
chr4 (122-261)||(5396926-5397068)
chr4 (122-254)||(9569475-9569610)
chr4 (122-254)||(29894410-29894545)
chr4 (122-254)||(31375113-31375248)
chr4 (127-254)||(18813375-18813505)
chr4 (122-217)||(42154167-42154266)
chr4 (122-182)||(53398356-53398416)
chr4 (122-254)||(7512767-7512902)
chr4 (122-222)||(13389020-13389124)
chr4 (122-254)||(24550813-24550948)
chr4 (122-222)||(24712088-24712192)
chr4 (122-254)||(30044577-30044712)
chr4 (130-254)||(39284568-39284694)
chr4 (122-254)||(49882702-49882837)
chr4 (122-183)||(1982561-1982622)
chr4 (122-217)||(3848847-3848946)
chr4 (127-254)||(24407502-24407632)
chr4 (127-254)||(28033197-28033327)
chr4 (127-262)||(37050706-37050844)
chr4 (127-222)||(37166143-37166242)
chr4 (122-254)||(6487849-6487981)
chr4 (122-254)||(9064781-9064917)
chr4 (132-222)||(34684212-34684306)
chr4 (122-254)||(12821165-12821298)
chr4 (122-254)||(29428055-29428190)
chr4 (122-254)||(31263494-31263629)
chr4 (127-211)||(35828279-35828367)
chr4 (122-222)||(50779815-50779919)
chr4 (127-254)||(18371351-18371481)
chr4 (122-253)||(28010045-28010179)
chr4 (127-183)||(1033516-1033572)
chr4 (122-182)||(23974710-23974770)
chr4 (133-254)||(1052876-1053000)
chr4 (122-254)||(13632089-13632225)
chr4 (122-168)||(35273388-35273435)
chr4 (130-254)||(579235-579362)
chr4 (196-262)||(3802915-3802981)
chr4 (122-254)||(14285095-14285230)
chr4 (121-179)||(17815213-17815271)
chr4 (122-254)||(28983732-28983867)
chr4 (122-222)||(31435942-31436046)
chr4 (122-168)||(42856563-42856609)
chr4 (122-168)||(49535885-49535931)
chr4 (122-183)||(12694523-12694584)
chr4 (196-265)||(32233690-32233758)
chr4 (122-183)||(35318540-35318601)
chr4 (122-183)||(49319731-49319792)
chr4 (127-168)||(54907974-54908015)
chr4 (127-183)||(5880353-5880409)
chr4 (127-183)||(8017855-8017911)
chr4 (122-165)||(3084327-3084370)
chr4 (127-166)||(17846834-17846873)
chr4 (124-167)||(32662685-32662728)
chr4 (121-164)||(36608000-36608043)
chr4 (127-174)||(46194254-46194301)
chr4 (154-254)||(7944217-7944320)
chr4 (130-168)||(26440975-26441013)
chr4 (122-180)||(29648764-29648822)
chr4 (122-222)||(42412012-42412116)
chr4 (120-149)||(4431993-4432022)
chr4 (125-166)||(11673296-11673337)
chr4 (127-168)||(28187246-28187287)
chr4 (122-243)||(42116481-42116604)
chr4 (133-182)||(51281477-51281526)
chr4 (122-182)||(4379307-4379367)
chr4 (121-149)||(21156057-21156085)
chr4 (132-246)||(25586328-25586445)
[»] chr2 (62 HSPs)
chr2 (127-254)||(43461327-43461457)
chr2 (122-254)||(15897214-15897349)
chr2 (122-254)||(23497505-23497640)
chr2 (122-254)||(4014806-4014941)
chr2 (122-254)||(34667044-34667179)
chr2 (122-222)||(35476514-35476618)
chr2 (122-254)||(45049385-45049520)
chr2 (122-217)||(23080127-23080226)
chr2 (122-259)||(23957052-23957192)
chr2 (122-254)||(6731542-6731677)
chr2 (122-222)||(13267999-13268103)
chr2 (122-254)||(36754734-36754869)
chr2 (122-217)||(32023252-32023351)
chr2 (122-254)||(35687780-35687914)
chr2 (122-223)||(2287332-2287437)
chr2 (122-211)||(7975049-7975142)
chr2 (122-254)||(38490392-38490528)
chr2 (121-222)||(39070018-39070123)
chr2 (122-254)||(3048542-3048677)
chr2 (122-254)||(12236121-12236256)
chr2 (121-183)||(18469499-18469561)
chr2 (122-222)||(20251509-20251613)
chr2 (127-255)||(24381250-24381381)
chr2 (122-254)||(36794804-36794939)
chr2 (122-254)||(41164641-41164776)
chr2 (122-254)||(44948019-44948154)
chr2 (122-183)||(4772303-4772364)
chr2 (122-179)||(35706852-35706909)
chr2 (122-183)||(42007282-42007343)
chr2 (122-183)||(42160324-42160385)
chr2 (127-180)||(10720453-10720507)
chr2 (122-246)||(16534944-16535071)
chr2 (122-254)||(33607043-33607178)
chr2 (196-254)||(36685396-36685453)
chr2 (127-243)||(39310371-39310490)
chr2 (122-226)||(40592313-40592421)
chr2 (122-222)||(42200886-42200990)
chr2 (127-254)||(34481664-34481794)
chr2 (121-168)||(12221226-12221274)
chr2 (122-166)||(23458680-23458724)
chr2 (122-254)||(7957979-7958112)
chr2 (122-243)||(8859291-8859415)
chr2 (137-254)||(15920607-15920727)
chr2 (129-168)||(31054055-31054094)
chr2 (122-254)||(10392645-10392780)
chr2 (196-254)||(11816769-11816826)
chr2 (122-168)||(11816858-11816904)
chr2 (122-168)||(16010695-16010741)
chr2 (127-165)||(18368799-18368837)
chr2 (122-183)||(30854802-30854864)
chr2 (122-168)||(31516287-31516333)
chr2 (127-181)||(31819643-31819697)
chr2 (122-254)||(40812017-40812152)
chr2 (122-222)||(43035440-43035544)
chr2 (122-182)||(19134584-19134645)
chr2 (127-168)||(32120615-32120655)
chr2 (122-166)||(433138-433182)
chr2 (121-149)||(2349191-2349219)
chr2 (119-163)||(7437986-7438030)
chr2 (122-166)||(11011976-11012019)
chr2 (127-183)||(16368755-16368811)
chr2 (122-170)||(31525032-31525080)
[»] chr8 (75 HSPs)
chr8 (122-254)||(4430728-4430863)
chr8 (122-254)||(6317300-6317435)
chr8 (127-254)||(37295131-37295261)
chr8 (127-254)||(44814868-44814998)
chr8 (122-254)||(2733616-2733750)
chr8 (122-256)||(14188090-14188227)
chr8 (122-210)||(2442762-2442854)
chr8 (122-217)||(4694716-4694815)
chr8 (130-254)||(20150229-20150356)
chr8 (122-254)||(37708440-37708575)
chr8 (122-254)||(38070474-38070609)
chr8 (122-254)||(38953473-38953608)
chr8 (122-259)||(19649486-19649626)
chr8 (122-172)||(5895873-5895923)
chr8 (122-254)||(27928158-27928293)
chr8 (122-254)||(34711548-34711683)
chr8 (122-254)||(36586482-36586617)
chr8 (122-261)||(4977020-4977162)
chr8 (127-222)||(25893856-25893955)
chr8 (127-254)||(26690699-26690829)
chr8 (122-183)||(35421685-35421746)
chr8 (127-183)||(10096617-10096673)
chr8 (122-244)||(10286468-10286593)
chr8 (122-211)||(26737971-26738064)
chr8 (124-182)||(5682291-5682349)
chr8 (122-222)||(5704652-5704756)
chr8 (122-222)||(7772074-7772178)
chr8 (127-254)||(9998635-9998766)
chr8 (122-222)||(18040136-18040240)
chr8 (122-254)||(35810237-35810372)
chr8 (122-246)||(37817376-37817503)
chr8 (127-258)||(42922544-42922677)
chr8 (127-254)||(10617790-10617919)
chr8 (122-254)||(25063339-25063475)
chr8 (124-222)||(1766710-1766815)
chr8 (122-254)||(3054024-3054159)
chr8 (122-254)||(4312133-4312268)
chr8 (127-254)||(9569729-9569860)
chr8 (127-181)||(14243704-14243758)
chr8 (122-254)||(16395373-16395508)
chr8 (122-254)||(20662522-20662657)
chr8 (122-222)||(25199046-25199150)
chr8 (122-222)||(25250785-25250889)
chr8 (122-254)||(27544909-27545044)
chr8 (127-254)||(33067383-33067511)
chr8 (122-168)||(41562442-41562488)
chr8 (127-254)||(26675562-26675692)
chr8 (122-170)||(28372473-28372522)
chr8 (127-168)||(37953788-37953829)
chr8 (122-179)||(39333945-39334002)
chr8 (122-167)||(40744325-40744370)
chr8 (127-183)||(6845050-6845106)
chr8 (122-174)||(8547206-8547258)
chr8 (127-253)||(23681015-23681144)
chr8 (130-254)||(11565007-11565135)
chr8 (122-173)||(14725304-14725355)
chr8 (130-172)||(16816833-16816876)
chr8 (122-165)||(35222273-35222316)
chr8 (121-183)||(403665-403727)
chr8 (121-163)||(7432582-7432624)
chr8 (122-254)||(11098067-11098202)
chr8 (122-168)||(11100370-11100416)
chr8 (122-164)||(24420073-24420115)
chr8 (122-168)||(24654974-24655020)
chr8 (122-254)||(31639095-31639230)
chr8 (122-168)||(43820868-43820914)
chr8 (130-254)||(17649835-17649961)
chr8 (127-164)||(25213634-25213671)
chr8 (127-168)||(34540146-34540187)
chr8 (202-258)||(3673832-3673887)
chr8 (127-183)||(10006151-10006207)
chr8 (122-178)||(11265128-11265184)
chr8 (144-254)||(27817442-27817555)
chr8 (126-170)||(39068483-39068527)
chr8 (133-185)||(40999764-40999816)
[»] chr5 (75 HSPs)
chr5 (122-254)||(4164959-4165094)
chr5 (122-254)||(24652307-24652442)
chr5 (122-254)||(36136855-36136990)
chr5 (122-254)||(42448211-42448346)
chr5 (122-260)||(36726989-36727128)
chr5 (122-181)||(39143441-39143500)
chr5 (122-254)||(2103026-2103162)
chr5 (122-254)||(16496600-16496735)
chr5 (122-254)||(36569279-36569414)
chr5 (122-254)||(39150919-39151054)
chr5 (126-254)||(40595961-40596091)
chr5 (122-264)||(18473914-18474059)
chr5 (122-222)||(4617790-4617894)
chr5 (122-222)||(6672241-6672345)
chr5 (122-254)||(9053964-9054099)
chr5 (122-254)||(23311166-23311301)
chr5 (122-254)||(26802334-26802469)
chr5 (122-254)||(26809884-26810019)
chr5 (122-254)||(26824911-26825046)
chr5 (132-254)||(4429934-4430059)
chr5 (127-254)||(10393495-10393625)
chr5 (127-254)||(25328297-25328427)
chr5 (127-254)||(29119611-29119741)
chr5 (122-254)||(1277437-1277573)
chr5 (122-254)||(23074637-23074773)
chr5 (133-254)||(34930236-34930360)
chr5 (122-222)||(6029612-6029716)
chr5 (122-254)||(17869117-17869252)
chr5 (127-185)||(19836152-19836210)
chr5 (122-222)||(28143256-28143360)
chr5 (122-246)||(36319503-36319630)
chr5 (122-183)||(1244248-1244309)
chr5 (127-168)||(37940923-37940964)
chr5 (122-174)||(12878194-12878246)
chr5 (122-182)||(41562458-41562518)
chr5 (122-185)||(7179366-7179429)
chr5 (122-254)||(671052-671187)
chr5 (122-168)||(1269601-1269647)
chr5 (122-222)||(1287315-1287419)
chr5 (122-254)||(11968776-11968911)
chr5 (122-246)||(24051403-24051530)
chr5 (122-222)||(24443891-24443995)
chr5 (122-168)||(37142108-37142154)
chr5 (122-222)||(42068541-42068645)
chr5 (130-171)||(4228865-4228906)
chr5 (122-217)||(6041873-6041972)
chr5 (127-168)||(9902583-9902624)
chr5 (197-254)||(21067516-21067572)
chr5 (139-254)||(36854151-36854269)
chr5 (127-183)||(6053118-6053174)
chr5 (122-168)||(1612372-1612419)
chr5 (122-173)||(7153265-7153316)
chr5 (122-165)||(9068803-9068846)
chr5 (122-165)||(12707961-12708004)
chr5 (130-165)||(36185145-36185180)
chr5 (122-222)||(1650291-1650395)
chr5 (132-174)||(9362564-9362606)
chr5 (122-172)||(9640612-9640662)
chr5 (127-165)||(10070772-10070810)
chr5 (122-254)||(10165532-10165667)
chr5 (122-183)||(21728660-21728722)
chr5 (122-168)||(22620733-22620779)
chr5 (121-167)||(29401977-29402023)
chr5 (128-252)||(37191250-37191377)
chr5 (122-183)||(14107252-14107313)
chr5 (127-222)||(16371496-16371595)
chr5 (127-254)||(36245987-36246116)
chr5 (127-168)||(43150240-43150281)
chr5 (120-254)||(5276344-5276481)
chr5 (120-168)||(12638550-12638598)
chr5 (125-165)||(29069631-29069671)
chr5 (127-183)||(33028235-33028291)
chr5 (127-183)||(38682933-38682989)
chr5 (130-174)||(42337919-42337963)
chr5 (131-183)||(42653550-42653602)
[»] chr6 (43 HSPs)
chr6 (122-254)||(17534515-17534651)
chr6 (122-254)||(8448135-8448270)
chr6 (122-254)||(8456939-8457074)
chr6 (122-254)||(8939626-8939761)
chr6 (122-254)||(2314590-2314727)
chr6 (122-254)||(10181045-10181180)
chr6 (127-222)||(1241600-1241699)
chr6 (127-254)||(18861760-18861890)
chr6 (127-246)||(24571618-24571740)
chr6 (127-174)||(21513077-21513124)
chr6 (122-222)||(8329582-8329686)
chr6 (122-254)||(31205176-31205311)
chr6 (127-222)||(6266637-6266736)
chr6 (127-254)||(32107828-32107958)
chr6 (122-178)||(8116818-8116874)
chr6 (122-254)||(10330804-10330940)
chr6 (122-168)||(4996872-4996918)
chr6 (122-168)||(7098806-7098852)
chr6 (122-222)||(15953234-15953338)
chr6 (122-222)||(31057832-31057936)
chr6 (122-183)||(4083587-4083648)
chr6 (122-183)||(10263138-10263199)
chr6 (127-254)||(12795012-12795142)
chr6 (125-254)||(9727497-9727630)
chr6 (122-254)||(735445-735578)
chr6 (137-222)||(2959008-2959097)
chr6 (122-185)||(13540226-13540289)
chr6 (130-185)||(29479437-29479492)
chr6 (122-168)||(4480474-4480520)
chr6 (122-168)||(7098963-7099009)
chr6 (122-183)||(16496719-16496781)
chr6 (122-168)||(28594153-28594199)
chr6 (130-217)||(2301408-2301499)
chr6 (126-179)||(2746453-2746506)
chr6 (122-183)||(4891008-4891069)
chr6 (120-165)||(7974793-7974838)
chr6 (127-172)||(8487631-8487676)
chr6 (125-174)||(17546039-17546088)
chr6 (122-163)||(24647142-24647183)
chr6 (122-183)||(32643795-32643856)
chr6 (122-181)||(2018831-2018891)
chr6 (122-166)||(13507394-13507438)
chr6 (127-183)||(16244416-16244472)
[»] scaffold0402 (1 HSPs)
scaffold0402 (122-254)||(1234-1369)
[»] scaffold0778 (1 HSPs)
scaffold0778 (127-217)||(823-917)
[»] scaffold0595 (1 HSPs)
scaffold0595 (122-254)||(345-480)
[»] scaffold0287 (1 HSPs)
scaffold0287 (122-254)||(1051-1186)
[»] scaffold0432 (1 HSPs)
scaffold0432 (122-217)||(9367-9466)
[»] scaffold0457 (1 HSPs)
scaffold0457 (127-183)||(6784-6840)
[»] scaffold0013 (1 HSPs)
scaffold0013 (122-222)||(90569-90673)
[»] scaffold0008 (1 HSPs)
scaffold0008 (122-222)||(39337-39441)
[»] scaffold0179 (1 HSPs)
scaffold0179 (122-217)||(4044-4143)
[»] scaffold0061 (1 HSPs)
scaffold0061 (122-181)||(8928-8987)
[»] scaffold0014 (1 HSPs)
scaffold0014 (122-254)||(195740-195875)
[»] scaffold0057 (1 HSPs)
scaffold0057 (130-253)||(64291-64417)
[»] scaffold0515 (1 HSPs)
scaffold0515 (122-254)||(2478-2613)
[»] scaffold0306 (1 HSPs)
scaffold0306 (122-254)||(2478-2613)
[»] scaffold0242 (2 HSPs)
scaffold0242 (127-181)||(15063-15117)
scaffold0242 (127-181)||(23898-23952)
[»] scaffold0163 (1 HSPs)
scaffold0163 (122-168)||(26999-27045)
[»] scaffold0027 (1 HSPs)
scaffold0027 (127-168)||(19395-19437)
[»] scaffold0882 (1 HSPs)
scaffold0882 (127-168)||(3779-3820)
[»] scaffold0002 (1 HSPs)
scaffold0002 (127-183)||(411653-411709)


Alignment Details
Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 44107381 - 44107515
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatacaaccccgg---ctccacttgtgtgtgtaagtttc 218  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||| | |||||||| |  |||| |||   |||||||||||||||| |||||     
T  44107381 tccacaagttctagctcaactggcaaaatgttgaaattgttaggccggatgccatgaccggggtcgaacctcggtacctccacttgtgtgtgtgagttta 44107480  T
Q  219 taataactgttgtcatttcctctatctaacaaaaaa 254  Q
    ||||| || |||||||||| ||||| || |||||||    
T  44107481 taatagct-ttgtcatttcgtctatttaccaaaaaa 44107515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 122 - 265
Target Start/End: Original strand, 13525169 - 13525315
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| |||||    
T  13525169 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 13525268  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaatataaaataaa 265  Q
     ||||  || ||| |||||| |||||||| ||||||||| ||||||||    
T  13525269 ataatggct-ttgccatttcgtctatctaccaaaaaataaaaaataaa 13525315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 3917766 - 3917901
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||||| |||||||| | | ||||||||   |||||||||||||||| |||||    
T  3917766 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 3917865  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  3917866 ataatggct-ttgccatttcgtctatctaccaaaaaa 3917901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 127 - 254
Target Start/End: Complemental strand, 10474037 - 10473907
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| ||||| ||||    
T  10474037 aagtcctagctcaactggcaaaatgctgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagtttataat 10473938  T
Q  223 aactgttgtcatttcctctatctaacaaaaaa 254  Q
      || ||| |||||| |||||||| |||||||    
T  10473937 ggct-ttgccatttcatctatctaccaaaaaa 10473907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 4232305 - 4232170
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| |||||    
T  4232305 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 4232206  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  4232205 ataatggct-ttgccatttcgtctatctaccaaaaaa 4232170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 8381079 - 8381214
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| |||||    
T  8381079 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 8381178  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  8381179 ataatggct-ttgccatttcgtctatctaccaaaaaa 8381214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 127 - 222
Target Start/End: Complemental strand, 44879356 - 44879257
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatacaaccccgg----ctccacttgtgtgtgtaagtttctaat 222  Q
    ||||||||| |||||||||||||||| ||||||||||||||  ||||| |||||||| | |||||||||    |||||||||||||||| ||||| ||||    
T  44879356 aagtcctagttcaactggcaaaatgtcgaaattgttaggccagatgtcatgaccggggttcaaccccggtcacctccacttgtgtgtgtgagtttataat 44879257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 27396854 - 27396988
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatacaaccccgg---ctccacttgtgtgtgtaagtttc 218  Q
    |||| ||||||||||||||||| |||||||  ||||||||||||||| ||| | |||||||| | | | |||||   |||||||||||||||| |||||     
T  27396854 tccagaagtcctagctcaactgacaaaatgccgaaattgttaggccggatgccatgaccggggttcgaacccggtacctccacttgtgtgtgtgagttta 27396953  T
Q  219 taataactgttgtcatttcctctatctaacaaaaaa 254  Q
    |||| ||| ||| |||||| |||||||| |||||||    
T  27396954 taatgact-ttgccatttcttctatctaccaaaaaa 27396988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 251
Target Start/End: Complemental strand, 38127970 - 38127838
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||| |||   |||||||| | | ||||||||   |||||||||||||||| |||||    
T  38127970 tccagaagtcctagctcaactggcaaaatgtcgaaattgttaggccggatgctatgaccggggttcgaaccccggttcctccacttgtgtgtgtgagttt 38127871  T
Q  218 ctaataactgttgtcatttcctctatctaacaaa 251  Q
     ||||  || ||| |||||| |||||||| ||||    
T  38127870 ataatggct-ttgccatttcgtctatctaccaaa 38127838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 10228957 - 10229092
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| ||||| || ||||||||||||||||   |||||||||||||||||||| |||||||| | | ||||||||   |||||||||||||||| |||||    
T  10228957 tccagaagtcttaactcaactggcaaaatgccaaaattgttaggccgaatgtcatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 10229056  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  10229057 ataatggct-ttgccatttcgtctatctaccaaaaaa 10229092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 32961106 - 32960971
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||  ||| | |||||||| | | ||||||||   |||||||||||||||| |||||    
T  32961106 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccagatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 32961007  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  32961006 ataatggct-ttgccatttcgtctatctaccaaaaaa 32960971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 43898091 - 43897956
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| ||||||||||||||| | |||||||  ||||||||||||||| ||| | |||||||||| | ||||||||   |||||||||||||||| |||||    
T  43898091 tccagaagtcctagctcaacagacaaaatgccgaaattgttaggccggatgccatgaccgggattcgaaccccggtacctccacttgtgtgtgtgagttt 43897992  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
      ||| ||| ||| |||||| |||||||| |||||||    
T  43897991 acaatgact-ttgccatttcgtctatctaccaaaaaa 43897956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 47410880 - 47410776
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||| |||||||||||| || ||||| |||||||| | | ||||| ||   |||||||||||||||| |||||    
T  47410880 tccagaagtcctagctcaactggcaaaatgtcgaaattgttaggtcggatgtcatgaccggggttcgaaccctggtacctccacttgtgtgtgtgagttt 47410781  T
Q  218 ctaat 222  Q
     ||||    
T  47410780 ataat 47410776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 24751753 - 24751814
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||| ||||| ||| ||||    
T  24751753 tccacaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgatcggg 24751814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 43605704 - 43605605
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| ||||||||||||||||||||||||| |||| ||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| |||||    
T  43605704 tccagaagtcctagctcaactggcaaaatgctgaatttgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 43605605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 54097568 - 54097434
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg--ctccacttgtgtgtgtaagtttc 218  Q
    |||| |||||||||||||| ||||||||||  ||||||||||||||| ||| | |||||||| |   ||||||||  |||||||||||||||| |||||     
T  54097568 tccagaagtcctagctcaaatggcaaaatgccgaaattgttaggccggatgccatgaccggggttggaaccccggtcctccacttgtgtgtgtgagttta 54097469  T
Q  219 taataactgttgtcatttcctctatctaacaaaaaa 254  Q
    ||||  || ||| |||||| ||||||||| ||||||    
T  54097468 taatggct-ttgccatttcgtctatctaataaaaaa 54097434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 211
Target Start/End: Complemental strand, 29212193 - 29212100
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgt 211  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   ||||||||||||||||    
T  29212193 tccataagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgt 29212100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 254
Target Start/End: Original strand, 35359732 - 35359852
Alignment:
Q  137 tcaactggcaaaatgttgaaattgttaggccgaatgtcgtgacc-gggatacaaccccgg---ctccacttgtgtgtgtaagtttctaataactgttgtc 232  Q
    |||||||||||||||  ||||||||||||||| ||| | ||||| ||| |  ||||||||   |||||||||||||||| ||||| |||| ||| |||||    
T  35359732 tcaactggcaaaatgccgaaattgttaggccggatgccatgaccagggttcgaaccccggtacctccacttgtgtgtgtgagtttataatgact-ttgtc 35359830  T
Q  233 atttcctctatctaacaaaaaa 254  Q
    ||||| |||||||| |||||||    
T  35359831 atttcgtctatctaccaaaaaa 35359852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 4833237 - 4833133
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   || ||||||||||||| |||||    
T  4833237 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtaccttcacttgtgtgtgtgagttt 4833138  T
Q  218 ctaat 222  Q
     ||||    
T  4833137 ataat 4833133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 4976836 - 4976732
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||   |||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| |||||    
T  4976836 tccagaagtcctagctcaactggcaaaatgccaaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgttagttt 4976737  T
Q  218 ctaat 222  Q
     ||||    
T  4976736 ataat 4976732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 24910416 - 24910281
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||| | || || ||| |||| | | ||||||||   |||||||||||||||| |||||    
T  24910416 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggctggatatcatgatcggggttcgaaccccggtacctccacttgtgtgtgtgagttt 24910317  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  24910316 ataatggct-ttgccatttcgtctatctaccaaaaaa 24910281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 53583961 - 53584007
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||    
T  53583961 tccagaagtcctagctcaactggcaaaatgtcgaaattgttaggccg 53584007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 254
Target Start/End: Original strand, 1242222 - 1242352
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    |||||||||||||||||||||||||  |||||| |||||||| ||| | ||| |||| | | ||||||||   |||||||||||||||| ||||| ||||    
T  1242222 aagtcctagctcaactggcaaaatgccgaaattattaggccggatgccatgatcggggttcgaaccccggtacctccacttgtgtgtgtgagtttataat 1242321  T
Q  223 aactgttgtcatttcctctatctaacaaaaaa 254  Q
      || ||| |||||| |||||||| |||||||    
T  1242322 ggct-ttgccatttcgtctatctaccaaaaaa 1242352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 6583363 - 6583264
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | ||| |||| | | ||||||||   |||||||||||||||| |||||    
T  6583363 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgatcggggttcgaaccccggtgcctccacttgtgtgtgtgagttt 6583264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 24650675 - 24650576
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||| ||||||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| |||||    
T  24650675 tccagaagtcctacctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 24650576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 44037577 - 44037516
Alignment:
Q  117 ataagtccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtga 178  Q
    |||| |||| |||||||||||||||||||||||||  |||||||||||| || |||||||||    
T  44037577 ataaatccagaagtcctagctcaactggcaaaatgccgaaattgttaggtcggatgtcgtga 44037516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 22371450 - 22371584
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg--ctccacttgtgtgtgtaagtttc 218  Q
    |||| |||||||| ||||||||||||||||  ||||||||||||||| ||| | |||||||| | | |||| | |  ||||| ||||||||||||||||     
T  22371450 tccagaagtcctacctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccacagtcctccatttgtgtgtgtaagttta 22371549  T
Q  219 taataactgttgtcatttcctctatctaacaaaaaa 254  Q
    ||||  || ||| |||||| |||||||| |||||||    
T  22371550 taatggct-ttgccatttcgtctatctaccaaaaaa 22371584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 11029663 - 11029799
Alignment:
Q  122 tccacaagtcctagctcaactggc-aaaatgttgaaattgttaggccgaatgtcgtgacc-gggatacaaccccgg---ctccacttgtgtgtgtaagtt 216  Q
    |||| ||||||||||||||||||| ||||||| ||||||||||||| | ||| | ||||| ||| |  ||||||||   |||||||||||||||| ||||    
T  11029663 tccagaagtcctagctcaactggcaaaaatgtcgaaattgttaggctggatgccatgaccagggttcgaaccccggtacctccacttgtgtgtgtgagtt 11029762  T
Q  217 tctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
    | ||||  || ||| |||||| |||||||| |||||||    
T  11029763 tataatggct-ttgccatttcgtctatctaccaaaaaa 11029799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 28171108 - 28170972
Alignment:
Q  122 tccacaagtcctagctcaactggc-aaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtt 216  Q
    |||| ||||||||||||||||||| ||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   ||| |||||||||||| ||||    
T  28171108 tccagaagtcctagctcaactggcaaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggcacctctacttgtgtgtgtgagtt 28171009  T
Q  217 tctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
    | ||||  || ||| |||||| |||||||| |||||||    
T  28171008 tataatggct-ttgccatttcgtctatctaccaaaaaa 28170972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 183
Target Start/End: Original strand, 2558754 - 2558808
Alignment:
Q  129 gtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    ||||||||||||||||||||||| ||||||||||||| || ||||| ||| ||||    
T  2558754 gtcctagctcaactggcaaaatgctgaaattgttaggtcggatgtcatgatcggg 2558808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 2687559 - 2687605
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||| |||||||||||||||||||||||||  |||||||||||||||    
T  2687559 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccg 2687605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 11312595 - 11312683
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgt 211  Q
    |||||||||||||||||||||||||  ||||||||||||||| |||   |||||||| | | ||||||||   ||||||||||||||||    
T  11312595 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgctatgaccggggttcgaaccccggtacctccacttgtgtgtgt 11312683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 263
Target Start/End: Complemental strand, 28197095 - 28196968
Alignment:
Q  139 aactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaataactgttgtcat 234  Q
    |||||||||||||  ||||||||||||||| ||||| |||||||| | | ||||||||   |||||||||||||||| ||||| ||||  || |||  ||    
T  28197095 aactggcaaaatgccgaaattgttaggccggatgtcatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagtttataatggct-ttgcaat 28196997  T
Q  235 ttcctctatctaacaaaaaatataaaata 263  Q
    ||| |||||||| ||||||| | ||||||    
T  28196996 ttcgtctatctaccaaaaaaaaaaaaata 28196968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 32590972 - 32591018
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||| |||||||||||||||||| ||||||| |||||||||||||||    
T  32590972 tccagaagtcctagctcaactggtaaaatgtcgaaattgttaggccg 32591018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 222
Target Start/End: Original strand, 34397680 - 34397784
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccg---gctccacttgtgtgtgtaagttt 217  Q
    |||| ||||||||| |||||||||||||||  ||||||||||||||| ||||| | |||||| | | |||||||    |||||||||||||||| |||||    
T  34397680 tccagaagtcctagttcaactggcaaaatgccgaaattgttaggccggatgtcataaccggggttcgaaccccgatacctccacttgtgtgtgtgagttt 34397779  T
Q  218 ctaat 222  Q
     ||||    
T  34397780 ataat 34397784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 172
Target Start/End: Original strand, 38085814 - 38085856
Alignment:
Q  130 tcctagctcaactggcaaaatgttgaaattgttaggccgaatg 172  Q
    |||||||||||||| |||||||| |||||||||||||||||||    
T  38085814 tcctagctcaactgacaaaatgtcgaaattgttaggccgaatg 38085856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 210
Target Start/End: Complemental strand, 40418603 - 40418511
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtg 210  Q
    |||| ||||||||||||||| || |||||| ||||||||||||||| |||||| ||| |||| | | ||||||||   |||||||||||||||    
T  40418603 tccagaagtcctagctcaacaggaaaaatgctgaaattgttaggccaaatgtcatgatcggggttcgaaccccggtacctccacttgtgtgtg 40418511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 254
Target Start/End: Complemental strand, 52256876 - 52256745
Alignment:
Q  127 aagtcctagctcaactggcaaaa-tgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaa 221  Q
    |||| |||||||||||||||||| ||| || |||||||||| | ||| | |||||||| | | ||||||||   |||||||||||||||| ||||| |||    
T  52256876 aagttctagctcaactggcaaaaatgtcgatattgttaggctggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagtttataa 52256777  T
Q  222 taactgttgtcatttcctctatctaacaaaaaa 254  Q
    | ||| ||| |||||| |||||||| |||||||    
T  52256776 tgact-ttgccatttcgtctatctaccaaaaaa 52256745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 6083269 - 6083166
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatacaaccccgg---ctccacttgtgtgtgtaagtttc 218  Q
    |||| |||||||||||||||| ||||||||  ||||||||||||||| ||  | |||||||| |  ||| ||||   |||||||||||||||| |||||     
T  6083269 tccagaagtcctagctcaactagcaaaatgccgaaattgttaggccggataccatgaccgggttcgaactccggtacctccacttgtgtgtgtgagttta 6083170  T
Q  219 taat 222  Q
    ||||    
T  6083169 taat 6083166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 254
Target Start/End: Complemental strand, 25118829 - 25118699
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgacc-gggatacaaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    ||||| |||||||||| ||||||||| ||||||||||||||| ||| | ||||| ||| |  ||||||||   |||||| ||||||||| | ||| ||||    
T  25118829 aagtcttagctcaactagcaaaatgtcgaaattgttaggccggatgccatgaccagggttcgaaccccggtacctccacctgtgtgtgtgaatttataat 25118730  T
Q  223 aactgttgtcatttcctctatctaacaaaaaa 254  Q
     | | |||||||||| |||||||| |||||||    
T  25118729 ga-ttttgtcatttcgtctatctaccaaaaaa 25118699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 37124216 - 37124277
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||| ||||| |||||| ||||||||||||  ||||||||||||||||||| | ||||||||    
T  37124216 tccagaagtcatagctctactggcaaaatgccgaaattgttaggccgaatgccatgaccggg 37124277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 41464664 - 41464725
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||| |||||||||||||||||||||||||  |||||||||||| || ||| | ||||||||    
T  41464664 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggtcggatgccatgaccggg 41464725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 168
Target Start/End: Complemental strand, 46311566 - 46311525
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||||||||||||||||| ||||||| |||||||||||||||    
T  46311566 aagtcctagctcaactggtaaaatgtcgaaattgttaggccg 46311525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 46838855 - 46838794
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||| |||||||||||||||||| ||||||  ||||||||||||||| ||| | ||||||||    
T  46838855 tccagaagtcctagctcaactggaaaaatgccgaaattgttaggccggatgccatgaccggg 46838794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 168
Target Start/End: Complemental strand, 50238963 - 50238922
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||||||||||||||||| ||||||| |||||||||||||||    
T  50238963 aagtcctagctcaactggtaaaatgtcgaaattgttaggccg 50238922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 254
Target Start/End: Original strand, 3440736 - 3440861
Alignment:
Q  133 tagctcaactggcaaaa-tgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaataactg 227  Q
    ||||||||||||||||| ||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| ||||| ||||  ||     
T  3440736 tagctcaactggcaaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagtttataatggct- 3440834  T
Q  228 ttgtcatttcctctatctaacaaaaaa 254  Q
    ||| |||||| |||||||| |||||||    
T  3440835 ttgccatttcgtctatctaccaaaaaa 3440861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 182
Target Start/End: Complemental strand, 30553096 - 30553036
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgg 182  Q
    |||| |||||||||||||||||||||||||  ||||||||||| ||| ||| | |||||||    
T  30553096 tccagaagtcctagctcaactggcaaaatgccgaaattgttagaccggatgccatgaccgg 30553036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 222
Target Start/End: Original strand, 43967932 - 43968027
Alignment:
Q  130 tcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtga-ccgggatacaaccccgg--ctccacttgtgtgtgtaagtttctaat 222  Q
    ||||||||||||||| ||| || |||||||||||||||| ||||| ||| | ||| |  ||||||||  |||||||||||||||| ||||| ||||    
T  43967932 tcctagctcaactggtaaagtgctgaaattgttaggccggatgtcatgatcagggttcgaaccccggtactccacttgtgtgtgtgagtttataat 43968027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 48191099 - 48191155
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||||||||||||||||  ||||||  ||||||||||||||| ||||| ||||||||    
T  48191099 aagtcctagctcaactgctaaaatgccgaaattgttaggccggatgtcatgaccggg 48191155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 165
Target Start/End: Original strand, 11249960 - 11250003
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttagg 165  Q
    ||||||||||||||||||||||| ||||||  ||||||||||||    
T  11249960 tccacaagtcctagctcaactggtaaaatgcagaaattgttagg 11250003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 19921440 - 19921397
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttagg 165  Q
    |||| |||||||||||||| |||||||||| |||||||||||||    
T  19921440 tccagaagtcctagctcaattggcaaaatgctgaaattgttagg 19921397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 127 - 174
Target Start/End: Original strand, 39172045 - 39172092
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtc 174  Q
    ||||||||||  ||||||||||||||  ||||||||||||||||||||    
T  39172045 aagtcctagcataactggcaaaatgtcaaaattgttaggccgaatgtc 39172092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 181
Target Start/End: Original strand, 46894813 - 46894872
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccg 181  Q
    |||| ||||||||||||||||| |||||| | ||||||||||||||| ||| | ||||||    
T  46894813 tccagaagtcctagctcaactgacaaaatatcgaaattgttaggccggatgccatgaccg 46894872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 222
Target Start/End: Original strand, 47069006 - 47069111
Alignment:
Q  122 tccacaagtcctagctcaactggc-aaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtt 216  Q
    |||| ||||| ||||||||||||| ||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| ||||    
T  47069006 tccagaagtcttagctcaactggcaaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagtt 47069105  T
Q  217 tctaat 222  Q
    | ||||    
T  47069106 tataat 47069111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 15003628 - 15003763
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| ||||||||| |||||||||||||||   ||||||||||| || ||||| |||||||| | | ||||||||   |||||| | ||||||| |||||    
T  15003628 tccagaagtcctagttcaactggcaaaatgccaaaattgttaggtcggatgtcatgaccggggttcgaaccccggtacctccacctatgtgtgtgagttt 15003727  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  15003728 ataatggct-ttgccatttcgtctatctaccaaaaaa 15003763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 24250725 - 24250771
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||| |||||||||||||| ||||||||||  |||||||||||||||    
T  24250725 tccagaagtcctagctcaattggcaaaatgccgaaattgttaggccg 24250771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 35069318 - 35069406
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgt 211  Q
    ||||| ||| |||||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   ||||||||||||||||    
T  35069318 aagtcttagttcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgt 35069406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 254
Target Start/End: Original strand, 36518178 - 36518235
Alignment:
Q  196 ctccacttgtgtgtgtaagtttctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
    |||||||||||||||| ||||| |||| ||| |||||||||| ||||||||| ||||||    
T  36518178 ctccacttgtgtgtgtgagtttataatgact-ttgtcatttcgtctatctaaaaaaaaa 36518235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 40193084 - 40193038
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||| ||||||||||| |||||| ||||||| |||||||||||||||    
T  40193084 tccagaagtcctagcttaactggtaaaatgtcgaaattgttaggccg 40193038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 210
Target Start/End: Original strand, 40840173 - 40840261
Alignment:
Q  127 aagtcctagctcaactggc-aaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtg 210  Q
    ||||||||||||||||||| ||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||    
T  40840173 aagtcctagctcaactggcaaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtg 40840261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 210
Target Start/End: Original strand, 42296712 - 42296803
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtg 210  Q
    |||| ||||||||||||||||| |||||||   |||||||||||||| ||||| |||||||| | | ||||||||   |||||||||||||||    
T  42296712 tccagaagtcctagctcaactg-caaaatgccaaaattgttaggccggatgtcatgaccggggttcgaaccccggtacctccacttgtgtgtg 42296803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 47408840 - 47408886
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||| |||||||||||||||| ||||||||  |||||||||||||||    
T  47408840 tccagaagtcctagctcaactagcaaaatgccgaaattgttaggccg 47408886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 174
Target Start/End: Original strand, 2900250 - 2900307
Alignment:
Q  117 ataagtccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtc 174  Q
    |||| |||| |||||||||||| ||||||||||||  |||||||||| |||| |||||    
T  2900250 ataaatccagaagtcctagctccactggcaaaatgccgaaattgttaagccggatgtc 2900307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 12948815 - 12948856
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||||||||||||||||| ||||||  |||||||||||||||    
T  12948815 aagtcctagctcaactggtaaaatgacgaaattgttaggccg 12948856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 17500927 - 17500988
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||| |||||||| ||||||||| ||||||  ||||||||||||||| ||| | ||||||||    
T  17500927 tccagaagtcctaactcaactggaaaaatgccgaaattgttaggccggatgccatgaccggg 17500988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 19961369 - 19961426
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgac 179  Q
    |||| |||||||| |||||||| |||||||| |||||||||||| || ||||| ||||    
T  19961369 tccagaagtcctaactcaactgacaaaatgtcgaaattgttaggtcggatgtcatgac 19961426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 163
Target Start/End: Complemental strand, 21402786 - 21402745
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgtta 163  Q
    |||| |||||||||||||||||||||||||  ||||||||||    
T  21402786 tccagaagtcctagctcaactggcaaaatgccgaaattgtta 21402745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 167
Target Start/End: Original strand, 23878946 - 23878991
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggcc 167  Q
    ||||||||||||||||||||||| ||||||   |||||||||||||    
T  23878946 tccacaagtcctagctcaactggaaaaatgcctaaattgttaggcc 23878991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 28266526 - 28266587
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||| ||||||||||||||||| |||||||  ||||||||||||| | ||| | ||||||||    
T  28266526 tccagaagtcctagctcaactgacaaaatgccgaaattgttaggctggatgccatgaccggg 28266587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 261
Target Start/End: Complemental strand, 46316523 - 46316464
Alignment:
Q  200 acttgtgtgtgtaagtttctaataactgttgtcatttcctctatctaacaaaaaatataaaa 261  Q
    |||||||||||| ||||| |||||||| |||||||||| ||||||| |||||||| ||||||    
T  46316523 acttgtgtgtgtgagtttataataact-ttgtcatttcgtctatct-acaaaaaaaataaaa 46316464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 49285508 - 49285569
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||| |||||||| ||| |||| |||||||| |||||||||||| |||||||  ||||||||    
T  49285508 tccagaagtcctaactccactgacaaaatgtcgaaattgttaggtcgaatgttttgaccggg 49285569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 168
Target Start/End: Complemental strand, 53669834 - 53669793
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||| ||||||||||||| |||||| ||||||||||||||||    
T  53669834 aagttctagctcaactggtaaaatgctgaaattgttaggccg 53669793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 211
Target Start/End: Original strand, 11751211 - 11751305
Alignment:
Q  122 tccacaagtcctagctcaactggc-aaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgt 211  Q
    |||| ||||||||||||||||||| ||||||  ||||||||||||||| ||| | | |||||| | | ||||||||   ||||||||||||||||    
T  11751211 tccataagtcctagctcaactggcaaaaatgccgaaattgttaggccggatgccatcaccggggttcgaaccccggtacctccacttgtgtgtgt 11751305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 236
Target Start/End: Original strand, 32635387 - 32635496
Alignment:
Q  130 tcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaataac 225  Q
    |||||||| |||||||||||||| |||||| ||||| || ||||| ||| |||| | | ||||||||   |||||||||||||||  ||||| |||| ||    
T  32635387 tcctagcttaactggcaaaatgtcgaaattattaggtcggatgtcatgatcggggttcgaaccccggtacctccacttgtgtgtgcgagtttataatgac 32635486  T
Q  226 tgttgtcattt 236  Q
    | |||||||||    
T  32635487 t-ttgtcattt 32635496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 167
Target Start/End: Original strand, 41921511 - 41921551
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggcc 167  Q
    |||||||||||||||||| ||||||  ||||||||||||||    
T  41921511 aagtcctagctcaactggtaaaatgccgaaattgttaggcc 41921551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 49500861 - 49500996
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccg-ggatacaaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||| ||||| ||| || || |  ||||||||   |||||||||||||||| |||||    
T  49500861 tccacaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgatcgaggttcgaaccccggtacctccacttgtgtgtgtgagttt 49500960  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||| || |||||||||| |||||||| |||||||    
T  49500961 ataatagct-ttgtcatttcgtctatctaccaaaaaa 49500996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 122 - 246
Target Start/End: Original strand, 49948241 - 49948368
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||| ||| | |||||||||| | |||||| |   |||||||||||||||| |||||    
T  49948241 tccagaagtcctagctcaactggcaaaatgtcgaaattgttaggccggatgccatgaccgggattcgaaccccagtacctccacttgtgtgtgtgagttt 49948340  T
Q  218 ctaataactgttgtcatttcctctatcta 246  Q
     |||| ||| |||||||||| ||||||||    
T  49948341 ataatgact-ttgtcatttcgtctatcta 49948368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 11797522 - 11797464
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggat 185  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  11797522 aagtcctaactcaactggcaaaatgtcgaaattgttaggccgaatgtcatgaccgggat 11797464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 19338306 - 19338171
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| |||||    
T  19338306 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 19338207  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  19338206 ataatggct-ttgccatttcgtctatctaccaaaaaa 19338171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 246
Target Start/End: Original strand, 36586251 - 36586378
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    ||||||||||||| ||||||||| ||||||| ||||||||||||||| ||| ||||| |||| | | ||||||||   |||||||||||||||| |||||    
T  36586251 tccacaagtcctaactcaactggtaaaatgtcgaaattgttaggccggatgccgtgatcggggttcgaaccccggtacctccacttgtgtgtgtgagttt 36586350  T
Q  218 ctaataactgttgtcatttcctctatcta 246  Q
     ||||  || |||||||||| ||||||||    
T  36586351 ataatggct-ttgtcatttcatctatcta 36586378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 42631113 - 42630978
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccg---gctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | ||| |||| | | |||||||    |||||||||||||||| |||||    
T  42631113 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgatcggggttcgaaccccgatacctccacttgtgtgtgtgagttt 42631014  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     |||| ||| |||||||||| |||||||| |||||||    
T  42631013 ataatgact-ttgtcatttcgtctatctatcaaaaaa 42630978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 254
Target Start/End: Complemental strand, 43676157 - 43676017
Alignment:
Q  117 ataagtccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgta 212  Q
    |||| |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   || |||||||||||||     
T  43676157 ataaatccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtaccttcacttgtgtgtgtg 43676058  T
Q  213 agtttctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
    ||||| ||||  || ||| |||||| |||||||| |||||||    
T  43676057 agtttataatggct-ttgccatttcgtctatctaccaaaaaa 43676017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 211
Target Start/End: Original strand, 48314167 - 48314260
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgt 211  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||||| |||||||| | | ||||||||   ||||||||||||||||    
T  48314167 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgaccggggttcgaaccccggtacctccacttgtgtgtgt 48314260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 5598301 - 5598436
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgg-gatacaaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||| ||||||  |||||||||||| || ||||| ||||||| | |  ||||||||   |||||||||||||||| |||||    
T  5598301 tccagaagtcctagctcaactggaaaaatgccgaaattgttaggtcggatgtcatgaccggagttcgaaccccggtacctccacttgtgtgtgtgagttt 5598400  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || |||||||||| ||||||||| ||||||    
T  5598401 ataatggct-ttgtcatttcgtctatctaaaaaaaaa 5598436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 130 - 254
Target Start/End: Complemental strand, 20164193 - 20164066
Alignment:
Q  130 tcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaataac 225  Q
    ||||||||||||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| ||||| ||||  |    
T  20164193 tcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagtttataatggc 20164094  T
Q  226 tgttgtcatttcctctatctaacaaaaaa 254  Q
    | ||| |||||| |||||||| |||||||    
T  20164093 t-ttgccatttcgtctatctaccaaaaaa 20164066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 222
Target Start/End: Original strand, 29005090 - 29005194
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| |||||    
T  29005090 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 29005189  T
Q  218 ctaat 222  Q
     ||||    
T  29005190 ataat 29005194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 40958702 - 40958567
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | |||||||| | | || |||||   |||||||||||||||| |||||    
T  40958702 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaatcccggtacctccacttgtgtgtgtgagttt 40958603  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  40958602 ataatggct-ttgccatttcgtctatctaccaaaaaa 40958567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 246
Target Start/End: Complemental strand, 43086599 - 43086472
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | ||| |||| | | ||||||||   |||||||||||||||| |||||    
T  43086599 tccataagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgatcggggttcgaaccccggtacctccacttgtgtgtgtgagttt 43086500  T
Q  218 ctaataactgttgtcatttcctctatcta 246  Q
     ||||  || |||||||||| ||||||||    
T  43086499 ataatggct-ttgtcatttcgtctatcta 43086472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 122 - 217
Target Start/End: Original strand, 10635489 - 10635588
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| |||||    
T  10635489 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 10635588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 114 - 183
Target Start/End: Original strand, 24119648 - 24119717
Alignment:
Q  114 aatataagtccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    ||||||| | || |||||||||||||||||||||||||  ||||||||||||||| ||||| ||||||||    
T  24119648 aatataaattcagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgaccggg 24119717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 39787778 - 39787717
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    ||||||||||||||||||||||| ||||||| ||||||||||| ||||||| | ||||||||    
T  39787778 tccacaagtcctagctcaactggtaaaatgtcgaaattgttagaccgaatgccatgaccggg 39787717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 40685529 - 40685590
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||| |||||||||||||||||||||||||| |||||||||||| || ||||| ||||||||    
T  40685529 tccagaagtcctagctcaactggcaaaatgtcgaaattgttaggtcggatgtcatgaccggg 40685590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 40809341 - 40809280
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||||| ||||||||    
T  40809341 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgaccggg 40809280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 217
Target Start/End: Complemental strand, 13555847 - 13555753
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||||||||||||||||||||||||  |||||| |||||||| ||||| |||||||| | | ||||||||   |||||||||||||||| |||||    
T  13555847 aagtcctagctcaactggcaaaatgccgaaattattaggccggatgtcatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 13555753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 260
Target Start/End: Original strand, 50248029 - 50248170
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccg-ggatacaaccccg---gctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||  ||||||| ||||||||||||||| ||||| |||||| || |  |||||||    |||||||||||||||| |||||    
T  50248029 tccagaagtcctagctcaactgataaaatgtcgaaattgttaggccggatgtcatgaccgaggttcgaaccccgatacctccacttgtgtgtgtgagttt 50248128  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaatataaa 260  Q
     ||||  || ||| |||||| |||||||| ||||||| |||||    
T  50248129 ataatggct-ttgccatttcgtctatctaccaaaaaaaataaa 50248170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 246
Target Start/End: Original strand, 2112743 - 2112874
Alignment:
Q  118 taagtccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaa 213  Q
    ||||||||||||||||||||||||| |||||||| |||||| |||||| || | ||| |||||||| | | |||||  |   |||||||||||||||| |    
T  2112743 taagtccacaagtcctagctcaactagcaaaatgatgaaatcgttaggtcggacgtcatgaccggggttcgaacccatgtacctccacttgtgtgtgtga 2112842  T
Q  214 gtttctaataactgttgtcatttcctctatcta 246  Q
    |||| ||||  || |||||||||| ||||||||    
T  2112843 gtttataatggct-ttgtcatttcgtctatcta 2112874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 253
Target Start/End: Original strand, 11786103 - 11786238
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaag-tt 216  Q
    ||||||||| ||||||||||||  |||||| |||||||||||||||| ||||| || | ||| | | ||||||||   |||||||||||||||| || ||    
T  11786103 tccacaagttctagctcaactgataaaatgctgaaattgttaggccggatgtcatggctggggttcaaaccccggtacctccacttgtgtgtgtgagttt 11786202  T
Q  217 tctaataactgttgtcatttcctctatctaacaaaaa 253  Q
    | |||| ||| |||||||||| ||||||||| |||||    
T  11786203 tataatgact-ttgtcatttcgtctatctaaaaaaaa 11786238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 48391956 - 48392091
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgacc-gggatacaaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | ||||| ||| |  ||||||||   |||||||| ||||||| |||||    
T  48391956 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccagggttcgaaccccggtacctccacttatgtgtgtgagttt 48392055  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  48392056 ataatggct-ttgccatttcgtctatctaccaaaaaa 48392091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 222
Target Start/End: Original strand, 3315799 - 3315898
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    |||||||||||||||||||||||||  || |||||||||||| ||| | ||||| |||| | ||||||||   |||||||||||||||| ||||| ||||    
T  3315799 aagtcctagctcaactggcaaaatgccgacattgttaggccggatgccatgaccaggattcgaaccccggtacctccacttgtgtgtgtgagtttataat 3315898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 254
Target Start/End: Complemental strand, 41445153 - 41445023
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgg-gatacaaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    |||||||||||||||||||||||||  || |||||||||||| ||||| ||| ||| | |  ||||||||   |||||||||||||||| ||||| | ||    
T  41445153 aagtcctagctcaactggcaaaatgccgacattgttaggccggatgtcatgatcggagttcgaaccccggtacctccacttgtgtgtgtgagtttattat 41445054  T
Q  223 aactgttgtcatttcctctatctaacaaaaaa 254  Q
      || ||| |||||| ||||||||||||||||    
T  41445053 ggct-ttgccatttcgtctatctaacaaaaaa 41445023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 254
Target Start/End: Complemental strand, 48731879 - 48731749
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    ||||||||||||||||| |||||||  ||||||||||||||  ||| | |||||||| | | ||||||||   ||| |||||||||||| ||||| ||||    
T  48731879 aagtcctagctcaactgacaaaatgccgaaattgttaggccagatgccatgaccggggttcgaaccccggtacctctacttgtgtgtgtgagtttataat 48731780  T
Q  223 aactgttgtcatttcctctatctaacaaaaaa 254  Q
      || |||||||||| |||||||| |||||||    
T  48731779 ggct-ttgtcatttcgtctatctaccaaaaaa 48731749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 5790063 - 5790119
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    ||||||||||| |||||||||||||  ||||||||||||||| ||||| ||||||||    
T  5790063 aagtcctagcttaactggcaaaatgccgaaattgttaggccggatgtcatgaccggg 5790119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 182
Target Start/End: Original strand, 28999374 - 28999434
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgg 182  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | |||||||    
T  28999374 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccgg 28999434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 29511113 - 29511169
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||||||||||||| ||| ||||||  ||||||||||||||||||||| ||||||||    
T  29511113 aagtcctagctcaattggtaaaatgacgaaattgttaggccgaatgtcatgaccggg 29511169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 40503597 - 40503649
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtc 174  Q
    |||| |||| |||||||||||| |||||||||||||||||||||||| |||||    
T  40503597 tccagaagttctagctcaactgacaaaatgttgaaattgttaggccggatgtc 40503649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 166
Target Start/End: Complemental strand, 3840485 - 3840446
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggc 166  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  3840485 aagtcctagctcaactggcaaaatgtcgaaattgttaggc 3840446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 4126575 - 4126710
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtga-ccgggatacaaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| ||||||||||||||||| |||||||  ||||||||||||||| ||| | ||| | ||| |  ||||||||   |||||||||||||||| |||||    
T  4126575 tccagaagtcctagctcaactgacaaaatgcggaaattgttaggccggatgccatgatcagggttcgaaccccggtacctccacttgtgtgtgtgagttt 4126674  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  4126675 ataatgcct-ttgccatttcgtctatctaccaaaaaa 4126710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 222
Target Start/End: Original strand, 17068152 - 17068256
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||| ||||||  ||||||||||||||| ||| | ||| |||| | | ||||||||   |||||||||||||||| |||||    
T  17068152 tccagaagtcctagctcaactggtaaaatgccgaaattgttaggccggatgccatgagcggggttcgaaccccggtacctccacttgtgtgtgtgagttt 17068251  T
Q  218 ctaat 222  Q
     ||||    
T  17068252 ataat 17068256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 25821078 - 25820974
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||  ||||||| ||||||||||||||| ||| | |||||||| | | ||||| ||   |||||||||||||||| |||||    
T  25821078 tccagaagtcctagctcaactgataaaatgtcgaaattgttaggccggatgccatgaccggggttcgaaccctggtacctccacttgtgtgtgtgagttt 25820979  T
Q  218 ctaat 222  Q
     ||||    
T  25820978 ataat 25820974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 26261421 - 26261375
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||    
T  26261421 tccacaagtcctagctcaactggaaaaatgccgaaattgttaggccg 26261375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 34010094 - 34010140
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||| ||||| |||||||||||||||||||| |||||||||||||||    
T  34010094 tccagaagtcttagctcaactggcaaaatgtcgaaattgttaggccg 34010140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 254
Target Start/End: Original strand, 13018078 - 13018208
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    ||||| |||||||||||||||| ||  ||||||||||| ||| ||| | |||||||| | | ||||||||   |||||||||| ||||| ||||| ||||    
T  13018078 aagtcttagctcaactggcaaagtgccgaaattgttagaccggatgccatgaccggggttcgaaccccggtacctccacttgtatgtgtcagtttataat 13018177  T
Q  223 aactgttgtcatttcctctatctaacaaaaaa 254  Q
      || |||||||||| |||||||| |||||||    
T  13018178 ggct-ttgtcatttcgtctatctaccaaaaaa 13018208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 254
Target Start/End: Complemental strand, 32880702 - 32880572
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccg---gctccacttgtgtgtgtaagtttctaat 222  Q
    |||||||| ||||||||||||||||  ||||||||||||||| ||| | |||| ||| | | |||||||    |||||||||||||||| ||||| ||||    
T  32880702 aagtcctaactcaactggcaaaatgccgaaattgttaggccggatgccatgactggggttcgaaccccgctacctccacttgtgtgtgtgagtttataat 32880603  T
Q  223 aactgttgtcatttcctctatctaacaaaaaa 254  Q
      || |||||||| | |||||||| |||||||    
T  32880602 ggct-ttgtcattccgtctatctaccaaaaaa 32880572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 270450 - 270316
Alignment:
Q  122 tccacaagtcctagctcaactggc-aaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtt 216  Q
    |||| ||||||||||||||||||| ||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||  ||||    
T  270450 tccagaagtcctagctcaactggcaaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtg--agtt 270353  T
Q  217 tctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
    | ||||  || ||| |||||| |||||||| |||||||    
T  270352 tataatggct-ttgccatttcgtctatctaccaaaaaa 270316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 165
Target Start/End: Original strand, 28381224 - 28381268
Alignment:
Q  121 gtccacaagtcctagctcaactggcaaaatgttgaaattgttagg 165  Q
    ||||| ||||||||||||||||||| |||||| ||||||||||||    
T  28381224 gtccataagtcctagctcaactggctaaatgtcgaaattgttagg 28381268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 32947624 - 32947680
Alignment:
Q  127 aagtcctagctcaactggcaaaa-tgttgaaattgttaggccgaatgtcgtgaccgg 182  Q
    ||||||||||||||||| ||||| |||| |||||||||||||||| ||| |||||||    
T  32947624 aagtcctagctcaactgacaaaaatgttaaaattgttaggccgaacgtcttgaccgg 32947680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 167
Target Start/End: Original strand, 39467029 - 39467069
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggcc 167  Q
    ||||||||||||||||||||||||| | |||||||||||||    
T  39467029 aagtcctagctcaactggcaaaatggtaaaattgttaggcc 39467069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 161
Target Start/End: Complemental strand, 25083247 - 25083208
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgt 161  Q
    |||| ||||||||||||||||||||||||| |||||||||    
T  25083247 tccagaagtcctagctcaactggcaaaatgctgaaattgt 25083208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 27078559 - 27078609
Alignment:
Q  132 ctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||||||||||| |||||||| ||||||||||||||| ||||| ||||||||    
T  27078559 ctagctcaactg-caaaatgtcgaaattgttaggccggatgtcatgaccggg 27078609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 8214623 - 8214669
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||| |||||||||||||||||| ||||| | |||||||||||||||    
T  8214623 tccagaagtcctagctcaactggaaaaatatcgaaattgttaggccg 8214669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 18089896 - 18089762
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| ||||| ||| ||||||| |||||||  ||||||||||||||| ||||| |||||||| | | ||||||||   |||||||||||| ||| |||||    
T  18089896 tccagaagtcttagttcaactgacaaaatgccgaaattgttaggccggatgtcatgaccggggttcgaaccccggtacctccacttgtgt-tgtgagttt 18089798  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  18089797 ataatggct-ttgccatttcgtctatctaccaaaaaa 18089762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 254
Target Start/End: Complemental strand, 22561208 - 22561151
Alignment:
Q  196 ctccacttgtgtgtgtaagtttctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
    |||||||||||||||| ||||| |||||||| |||||||||  ||||||||| ||||||    
T  22561208 ctccacttgtgtgtgtgagtttataataact-ttgtcattttgtctatctaaaaaaaaa 22561151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 30455204 - 30455250
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||| |||||||||||||||||  ||||||| |||||||||||||||    
T  30455204 tccagaagtcctagctcaactgataaaatgtcgaaattgttaggccg 30455250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 182
Target Start/End: Complemental strand, 33845722 - 33845672
Alignment:
Q  132 ctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgg 182  Q
    ||||||||||||||||||||  ||||||||||| ||| ||||| |||||||    
T  33845722 ctagctcaactggcaaaatgccgaaattgttagaccggatgtcatgaccgg 33845672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 182
Target Start/End: Original strand, 33948256 - 33948306
Alignment:
Q  132 ctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgg 182  Q
    ||||||||||||||||||||  ||||||||||| ||| ||||| |||||||    
T  33948256 ctagctcaactggcaaaatgccgaaattgttagaccggatgtcatgaccgg 33948306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 1800733 - 1800680
Alignment:
Q  126 caagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgac 179  Q
    ||||||||||||||||||  |||||||| |||||||||| ||| | ||||||||    
T  1800733 caagtcctagctcaactgataaaatgttaaaattgttagaccggacgtcgtgac 1800680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 5322592 - 5322653
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||| |||| |||||||||||| ||||||| |||||||||||||| | || || ||||||||    
T  5322592 tccagaagttctagctcaactgacaaaatgctgaaattgttaggctggatatcatgaccggg 5322653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 7204632 - 7204575
Alignment:
Q  127 aagtcctagctcaactggc-aaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    ||||||||||||||||||| ||||||  |||||||||||||||||  || ||||||||    
T  7204632 aagtcctagctcaactggcaaaaatgccgaaattgttaggccgaacatcatgaccggg 7204575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 167
Target Start/End: Complemental strand, 15906295 - 15906250
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggcc 167  Q
    |||| |||||||||||||||| ||||||||  ||||||||||||||    
T  15906295 tccagaagtcctagctcaactagcaaaatgccgaaattgttaggcc 15906250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 222
Target Start/End: Original strand, 21522322 - 21522421
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    |||||||||||||| ||||||| ||  |||||||||||| || ||| | |||||||| | | ||||||||   |||||||||||||||| ||||| ||||    
T  21522322 aagtcctagctcaattggcaaagtgccgaaattgttaggtcggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagtttataat 21522421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 168
Target Start/End: Complemental strand, 39522881 - 39522840
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||||||| ||||||||||||||||  |||||||||||||||    
T  39522881 aagtcctaactcaactggcaaaatgcagaaattgttaggccg 39522840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 15104049 - 15104105
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    ||||||||||||||||| |||||||   |||||||||||||| ||||| ||| ||||    
T  15104049 aagtcctagctcaactgacaaaatgccaaaattgttaggccggatgtcatgatcggg 15104105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 166
Target Start/End: Complemental strand, 21897801 - 21897765
Alignment:
Q  130 tcctagctcaactggcaaaatgttgaaattgttaggc 166  Q
    |||||||||||||| |||||||| |||||||||||||    
T  21897801 tcctagctcaactgacaaaatgtcgaaattgttaggc 21897765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 35010717 - 35010673
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggc 166  Q
    |||| |||||||||||||||| ||||||||  |||||||||||||    
T  35010717 tccagaagtcctagctcaactagcaaaatgccgaaattgttaggc 35010673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 165
Target Start/End: Complemental strand, 43500268 - 43500228
Alignment:
Q  125 acaagtcctagctcaactggcaaaatgttgaaattgttagg 165  Q
    ||||||| |||||||||||| ||||||| ||||||||||||    
T  43500268 acaagtcttagctcaactggtaaaatgtcgaaattgttagg 43500228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 5e-22; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 127 - 254
Target Start/End: Original strand, 17895639 - 17895769
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| ||||| ||||    
T  17895639 aagtcctagctcaactggcaaaatgctgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagtttataat 17895738  T
Q  223 aactgttgtcatttcctctatctaacaaaaaa 254  Q
      || |||||||||| |||||||| |||||||    
T  17895739 ggct-ttgtcatttcgtctatctaccaaaaaa 17895769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 2228208 - 2228073
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| ||||| |||||||||||||||||||| ||||||||||||||| ||||| |||||||| | | || |||||   |||||||||| ||||| |||||    
T  2228208 tccagaagtcgtagctcaactggcaaaatgtcgaaattgttaggccggatgtcatgaccggggttcgaatcccggtacctccacttgtatgtgtgagttt 2228109  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     |||| ||| |||||||||| |||||||| |||||||    
T  2228108 ataatgact-ttgtcatttcgtctatctaccaaaaaa 2228073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 265
Target Start/End: Complemental strand, 10061144 - 10060998
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||| ||| | |||||||| | | || |||||   |||||||||||||||| |||||    
T  10061144 tccacaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaatcccggtacctccacttgtgtgtgtgagttt 10061045  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaatataaaataaa 265  Q
     ||||  || ||| |||||| ||||||||  |||||| ||||||||||    
T  10061044 ataatggct-ttgccatttcgtctatctattaaaaaaaataaaataaa 10060998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 35157212 - 35157077
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||||| |||||||| | | ||||||||   |||||||| ||||||| |||||    
T  35157212 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgaccggggttcgaaccccggtacctccacttatgtgtgtgagttt 35157113  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  35157112 ataatggct-ttgccatttcgtctatctaccaaaaaa 35157077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 130 - 254
Target Start/End: Original strand, 44327648 - 44327775
Alignment:
Q  130 tcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aacccc---ggctccacttgtgtgtgtaagtttctaataac 225  Q
    |||||||||||||||||||||||  |||||||||||||| ||||| ||||||| || | ||||||     |||||||||||||||| ||||| ||||| |    
T  44327648 tcctagctcaactggcaaaatgtcaaaattgttaggccggatgtcatgaccggaattcgaaccccaatacctccacttgtgtgtgtgagtttataatagc 44327747  T
Q  226 tgttgtcatttcctctatctaacaaaaaa 254  Q
    | |||||||||| |||||||| |||||||    
T  44327748 t-ttgtcatttcgtctatctaccaaaaaa 44327775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 9379991 - 9380052
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||    
T  9379991 tccagaagtcctagctcaactggcaaaatgtcgaaattgttaggccggatgtcatgaccggg 9380052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 261
Target Start/End: Complemental strand, 45041861 - 45041719
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| ||||| |||||||||||||||||||  |||||||||||| || ||| | |||||||| | | ||||||||   |||||||||||||||| |||||    
T  45041861 tccagaagtcttagctcaactggcaaaatgccgaaattgttaggtcggatgccttgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 45041762  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaatataaaa 261  Q
     |||| ||| ||| |||||| |||||||| ||||||| ||||||    
T  45041761 ataatgact-ttgccatttcgtctatctaccaaaaaaaataaaa 45041719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 1323683 - 1323818
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgacc-gggatacaaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||| ||||||||||| ||||| ||||| ||| |  ||||| ||   |||||||||||||||| |||||    
T  1323683 tccagaagtcctagctcaactggcaaaatgccgaatttgttaggccggatgtcatgaccagggttcgaacccaggtacctccacttgtgtgtgtgagttt 1323782  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     |||| ||| ||| |||||| |||||||| |||||||    
T  1323783 ataatgact-ttgccatttcgtctatctaccaaaaaa 1323818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 1573969 - 1573865
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||| ||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   ||||||||||||||||||||||    
T  1573969 tccagaagtcctagctcaactggtaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtaagttt 1573870  T
Q  218 ctaat 222  Q
     ||||    
T  1573869 ataat 1573865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 3497645 - 3497510
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||| ||   |||||||||||||||| |||||    
T  3497645 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccctggtacctccacttgtgtgtgtgagttt 3497546  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  3497545 ataatggct-ttgccatttcgtctatctaccaaaaaa 3497510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 4106554 - 4106689
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||| ||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| |||||    
T  4106554 tccagaagtcctagctcaactggtaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 4106653  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  4106654 ataatggct-ttgccatttcatctatctaccaaaaaa 4106689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 45236930 - 45237065
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccg---gctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||||| |||||||| | | |||||||    |||||||||||| ||| |||||    
T  45236930 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgaccggggttcgaaccccgatacctccacttgtgtatgtgagttt 45237029  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  45237030 ataatggct-ttgccatttcgtctatctaccaaaaaa 45237065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 254
Target Start/End: Original strand, 21226070 - 21226200
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    |||||||| ||||||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| ||||| ||||    
T  21226070 aagtcctatctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagtttataat 21226169  T
Q  223 aactgttgtcatttcctctatctaacaaaaaa 254  Q
      || ||| |||||| |||||||| |||||||    
T  21226170 gtct-ttgccatttcatctatctaccaaaaaa 21226200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 31300125 - 31299988
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccact--tgtgtgtgtaagt 215  Q
    |||| ||||||||||| |||||||||||||  |||||||||| |||| ||||| |||||||| | | |||| |||   |||||||  ||||||||| |||    
T  31300125 tccagaagtcctagctaaactggcaaaatgccgaaattgttaagccggatgtcatgaccggggttcgaacctcggtacctccacttatgtgtgtgtgagt 31300026  T
Q  216 ttctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
    || |||||||| |||||||||| |||||||| |||||||    
T  31300025 ttataataact-ttgtcatttcgtctatctaccaaaaaa 31299988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 182
Target Start/End: Complemental strand, 2354925 - 2354865
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgg 182  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||||| |||||||    
T  2354925 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgaccgg 2354865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 254
Target Start/End: Original strand, 5508696 - 5508820
Alignment:
Q  133 tagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaataactgt 228  Q
    |||||||||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| ||||| ||||  || |    
T  5508696 tagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagtttgtaatggct-t 5508794  T
Q  229 tgtcatttcctctatctaacaaaaaa 254  Q
    || |||||| |||||||| |||||||    
T  5508795 tgccatttcgtctatctaccaaaaaa 5508820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 223
Target Start/End: Original strand, 19306712 - 19306817
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  |||||| |||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| |||||    
T  19306712 tccagaagtcctagctcaactggcaaaatgccgaaattattaggccggatgccatgaccggggttcgaaccccggttcctccacttgtgtgtgtgagttt 19306811  T
Q  218 ctaata 223  Q
     |||||    
T  19306812 ataata 19306817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 3861464 - 3861360
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| ||||||||| | |||||||||||||| ||||||||||||||| ||||| ||| |||| | | ||||||||   |||||||||||||||| |||||    
T  3861464 tccagaagtcctagtttaactggcaaaatgtcgaaattgttaggccggatgtcatgatcggggttcgaaccccggtacctccacttgtgtgtgtgagttt 3861365  T
Q  218 ctaat 222  Q
     ||||    
T  3861364 ataat 3861360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 7312576 - 7312488
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgt 211  Q
    |||||||||||||||||||||||||   |||||||||||||| ||||| |||||||| | | ||||||||   ||||||||||||||||    
T  7312576 aagtcctagctcaactggcaaaatgccaaaattgttaggccggatgtcatgaccggggttcgaaccccggtacctccacttgtgtgtgt 7312488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 29151583 - 29151629
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||    
T  29151583 tccagaagtcctagctcaactggcaaaatgctgaaattgttaggccg 29151629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 35849295 - 35849430
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||| ||  ||||||||||||||| ||| | |||||||| | | ||||||||   ||| |||||||||||| |||||    
T  35849295 tccagaagtcctagctcaactggcaaagtgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctctacttgtgtgtgtgagttt 35849394  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  35849395 ataatggct-ttgccatttcgtctatctaccaaaaaa 35849430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 246
Target Start/End: Original strand, 40809045 - 40809172
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgacc-gggatacaaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||| ||||||||||| ||||| ||||| ||| |  ||||| ||   |||||||||||||||| |||||    
T  40809045 tccagaagtcctagctcaactggcaaaatgccgaatttgttaggccggatgtcatgaccagggttcgaaccctggtacctccacttgtgtgtgtgagttt 40809144  T
Q  218 ctaataactgttgtcatttcctctatcta 246  Q
     |||| ||| ||| |||||| ||||||||    
T  40809145 ataatgact-ttgccatttcgtctatcta 40809172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 47584799 - 47584695
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||| || |||||||||||| ||| | |||||||| | | ||||||||   |||||||| ||||||| |||||    
T  47584799 tccagaagtcctagctcaactggcaaaatgtcgacattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttatgtgtgtgagttt 47584700  T
Q  218 ctaat 222  Q
     ||||    
T  47584699 ataat 47584695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 48612517 - 48612652
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   || ||||| ||||||| |||||    
T  48612517 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtaccttcacttatgtgtgtgagttt 48612616  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  48612617 ataatggct-ttgccatttcgtctatctaccaaaaaa 48612652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 48729812 - 48729760
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtc 174  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| |||||    
T  48729812 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtc 48729760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 181
Target Start/End: Complemental strand, 4887641 - 4887582
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccg 181  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | ||||||    
T  4887641 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccg 4887582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 37117973 - 37117930
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttagg 165  Q
    |||| ||||||||||||||||| |||||||||||||||||||||    
T  37117973 tccagaagtcctagctcaactgacaaaatgttgaaattgttagg 37117930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 181
Target Start/End: Original strand, 47459416 - 47459475
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccg 181  Q
    |||| ||||| |||||||||||| ||||||| ||||||||||||||| ||||| ||||||    
T  47459416 tccaaaagtcatagctcaactggtaaaatgtcgaaattgttaggccggatgtcatgaccg 47459475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 4069244 - 4069140
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||| |||||||||||||||   ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| |||||    
T  4069244 tccagaagtcctaactcaactggcaaaataccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 4069145  T
Q  218 ctaat 222  Q
     ||||    
T  4069144 ataat 4069140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 18944924 - 18945059
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| ||||||||| |||||||||||||||  ||||||||||||||| || || |||||||| | | ||||| ||   |||||||| ||||||| |||||    
T  18944924 tccagaagtcctagttcaactggcaaaatgccgaaattgttaggccggatatcatgaccggggttcgaaccctggtacctccacttatgtgtgtgagttt 18945023  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  18945024 ataatggct-ttgccatttcatctatctaccaaaaaa 18945059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 27396442 - 27396396
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||| |||||||||||||||||||||||||  |||||||||||||||    
T  27396442 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccg 27396396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 31717297 - 31717432
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||| ||||||  ||||||||||||||| ||| | |||||||| | | ||| ||||   |||||||| ||||||| |||||    
T  31717297 tccagaagtcctagctcaactggtaaaatgccgaaattgttaggccggatgccatgaccggggttcgaactccggtacctccacttatgtgtgtgagttt 31717396  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  31717397 ataatggct-ttgccatttcgtctatctaccaaaaaa 31717432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 38261006 - 38261060
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccg 181  Q
    ||||||||||||||||| |||||||| ||||||||||||||| ||| | ||||||    
T  38261006 aagtcctagctcaactgacaaaatgtcgaaattgttaggccggatgccatgaccg 38261060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 43723312 - 43723447
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    ||||||||||||||||| ||||||||||||   ||||||||| |||| ||||| |||  ||| | | ||||||||   |||||||||||||||| |||||    
T  43723312 tccacaagtcctagctcgactggcaaaatgccaaaattgttaagccggatgtcatgattggggttcgaaccccggttcctccacttgtgtgtgtgagttt 43723411  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  43723412 ataatggct-ttgccatttcgtctatctaccaaaaaa 43723447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 254
Target Start/End: Complemental strand, 4674432 - 4674302
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    |||||||||||||||||||||||||  |||||||||| | |  || || |||||||| | | ||||||||   |||||||||||||||| ||||| ||||    
T  4674432 aagtcctagctcaactggcaaaatgccgaaattgttaagtcagatatcatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagtttataat 4674333  T
Q  223 aactgttgtcatttcctctatctaacaaaaaa 254  Q
      || ||| |||||| |||||||| |||||||    
T  4674332 ggct-ttgccatttcgtctatctaccaaaaaa 4674302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 6596542 - 6596603
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||| |||||||||||||||||||||||||   |||||||||||||| ||| | ||||||||    
T  6596542 tccagaagtcctagctcaactggcaaaatgccaaaattgttaggccggatgccatgaccggg 6596603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 254
Target Start/End: Original strand, 16816700 - 16816826
Alignment:
Q  131 cctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaataact 226  Q
    ||||| |||||||||||||||  ||||||||||||||| ||| | |||||||| | | |||| |||   |||||||||||||||| ||||| ||||  ||    
T  16816700 cctagttcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccgcggtacctccacttgtgtgtgtgagtttataatggct 16816799  T
Q  227 gttgtcatttcctctatctaacaaaaaa 254  Q
     ||| |||||| |||||||| |||||||    
T  16816800 -ttgccatttcgtctatctaccaaaaaa 16816826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 33512802 - 33512843
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||||||||||||||||||||||||  |||||||||||||||    
T  33512802 aagtcctagctcaactggcaaaatgccgaaattgttaggccg 33512843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 254
Target Start/End: Original strand, 10166875 - 10167004
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatacaaccccgg---ctccacttgtgtgtgtaagtttctaata 223  Q
    |||||||||||||||||  ||||||  ||||||||||||||| ||| | |||||||| |  ||| | ||   |||||||||||| ||| ||||| ||||     
T  10166875 aagtcctagctcaactgataaaatgccgaaattgttaggccggatgccatgaccgggttcgaactctggtacctccacttgtgtatgtgagtttataatg 10166974  T
Q  224 actgttgtcatttcctctatctaacaaaaaa 254  Q
     || |||||||||| |||||||| |||||||    
T  10166975 gct-ttgtcatttcgtctatctatcaaaaaa 10167004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 181
Target Start/End: Original strand, 33228699 - 33228759
Alignment:
Q  122 tccacaagtcctagctcaactggc-aaaatgttgaaattgttaggccgaatgtcgtgaccg 181  Q
    |||| ||||||||||||||||||| ||||||| ||||||||||||||| ||| | ||||||    
T  33228699 tccagaagtcctagctcaactggcaaaaatgtcgaaattgttaggccggatgccatgaccg 33228759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 37410825 - 37410773
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgac 179  Q
    ||||| |||||||||||||||||||  ||||||||||||||| ||||| ||||    
T  37410825 aagtcttagctcaactggcaaaatgccgaaattgttaggccggatgtcatgac 37410773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 254
Target Start/End: Complemental strand, 40656233 - 40656101
Alignment:
Q  127 aagtcctagctcaactggc--aaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttcta 220  Q
    |||||||||||||||||||  ||||||  || |||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| ||||| ||    
T  40656233 aagtcctagctcaactggcaaaaaatgccgatattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagtttata 40656134  T
Q  221 ataactgttgtcatttcctctatctaacaaaaaa 254  Q
    ||  || ||| |||||| ||||||||| ||||||    
T  40656133 atggct-ttgccatttcgtctatctaaaaaaaaa 40656101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 222
Target Start/End: Complemental strand, 43133229 - 43133127
Alignment:
Q  125 acaagtcctagctcaactggcaaaa-tgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttct 219  Q
    |||||||||||||||| |||||||| |   ||||||||||||| ||||||| |||||||| | | ||||||||   |||||||||||||||| ||||| |    
T  43133229 acaagtcctagctcaaatggcaaaaataccgaaattgttaggctgaatgtcatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagtttat 43133130  T
Q  220 aat 222  Q
    |||    
T  43133129 aat 43133127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 127 - 174
Target Start/End: Complemental strand, 3043939 - 3043892
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtc 174  Q
    |||||||||||||| ||  ||||||||||||||||||||||| |||||    
T  3043939 aagtcctagctcaattgataaaatgttgaaattgttaggccggatgtc 3043892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 246
Target Start/End: Complemental strand, 27339857 - 27339729
Alignment:
Q  121 gtccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccg-ggatacaaccccgg---ctccacttgtgtgtgtaagtt 216  Q
    |||||||||||||||||||| || |||||| || |||||||||| ||| ||||  ||||||  | |  |||| |||   |||||||||||||||| ||||    
T  27339857 gtccacaagtcctagctcaagtgacaaaatattaaaattgttagaccggatgttatgaccgtagttcaaacctcggtatctccacttgtgtgtgtgagtt 27339758  T
Q  217 tctaataactgttgtcatttcctctatcta 246  Q
    | |||| ||| |||||||||| ||||||||    
T  27339757 tataatgact-ttgtcatttcgtctatcta 27339729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 168
Target Start/End: Complemental strand, 10704011 - 10703973
Alignment:
Q  130 tcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  10704011 tcctagctcaactggcaaaatgccgaaattgttaggccg 10703973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 26336504 - 26336446
Alignment:
Q  125 acaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||||| ||||||||||||| |||||| ||||||||||| || | ||||| ||||||||    
T  26336504 acaagttctagctcaactggtaaaatggtgaaattgttaagctggatgtcatgaccggg 26336446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 165
Target Start/End: Original strand, 37919974 - 37920012
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttagg 165  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  37919974 aagtcctagctcaactggcaaaatatcgaaattgttagg 37920012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 42557630 - 42557584
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||| |||||||||||||| ||||||||||  |||||||||||||||    
T  42557630 tccataagtcctagctcaattggcaaaatgccgaaattgttaggccg 42557584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 222
Target Start/End: Original strand, 19258429 - 19258528
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    ||||||| |||||||| | ||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| ||||| ||||    
T  19258429 aagtcctggctcaactagaaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagtttataat 19258528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 32251463 - 32251402
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||| ||||||||| |||||||||||||||  |||||||||| | || ||||| ||||||||    
T  32251463 tccagaagtcctagttcaactggcaaaatgccgaaattgttaagtcggatgtcatgaccggg 32251402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 41780263 - 41780324
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||| |||||||| ||||||| ||||||||| ||||||||||||  | ||||| ||||||||    
T  41780263 tccagaagtcctaactcaactagcaaaatgtcgaaattgttaggttggatgtcatgaccggg 41780324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 165
Target Start/End: Complemental strand, 5841608 - 5841564
Alignment:
Q  121 gtccacaagtcctagctcaactggcaaaatgttgaaattgttagg 165  Q
    |||||||||||||||||||| ||| ||||| | ||||||||||||    
T  5841608 gtccacaagtcctagctcaattggtaaaatatcgaaattgttagg 5841564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 163
Target Start/End: Complemental strand, 36280048 - 36280012
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgtta 163  Q
    |||||||||||||||||||||||||  ||||||||||    
T  36280048 aagtcctagctcaactggcaaaatgccgaaattgtta 36280012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 38930406 - 38930354
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtc 174  Q
    |||| |||||||||||||| ||||||| |||  |||||||||||| |||||||    
T  38930406 tccagaagtcctagctcaattggcaaagtgtcaaaattgttaggctgaatgtc 38930354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 5e-22; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 127 - 254
Target Start/End: Complemental strand, 47462159 - 47462029
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    |||||||||||||||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| ||||| ||||    
T  47462159 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagtttataat 47462060  T
Q  223 aactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||| |||||||||| |||||||| |||||||    
T  47462059 gact-ttgtcatttcgtctatctaccaaaaaa 47462029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 122 - 267
Target Start/End: Complemental strand, 46488245 - 46488097
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||||| |||||||| | | ||||||||   |||||||||||||||| |||||    
T  46488245 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgaccggggttcaaaccccggtacctccacttgtgtgtgtgagttt 46488146  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaatataaaataaaca 267  Q
     ||||  || ||| |||||| |||||||| ||||||| | |||| |||||    
T  46488145 ataatggct-ttgccatttcgtctatctaccaaaaaaaaaaaaaaaaaca 46488097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 261
Target Start/End: Complemental strand, 5397068 - 5396926
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||||| |||||||| | | ||||||||   |||||||||||||||| |||||    
T  5397068 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 5396969  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaatataaaa 261  Q
     ||||  || ||| |||||| | |||||| ||||||| ||||||    
T  5396968 ataatggct-ttgccatttcgtgtatctaccaaaaaaaataaaa 5396926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 9569475 - 9569610
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||||| |||||||| | | ||||| ||   |||||||||||||||| |||||    
T  9569475 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgaccggggttcgaaccctggtacctccacttgtgtgtgtgagttt 9569574  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  9569575 ataatggct-ttgccatttcgtctatctatcaaaaaa 9569610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 29894410 - 29894545
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||| |||||| ||||| || ||||| |||||||| | | ||||| ||   |||||||||||||||| |||||    
T  29894410 tccagaagtcctagctcaactggcaaaatgtcgaaattattaggtcggatgtcatgaccggggttcgaaccctggtacctccacttgtgtgtgtgagttt 29894509  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||| || ||| |||||| |||||||| |||||||    
T  29894510 ataatagct-ttgccatttcgtctatctaccaaaaaa 29894545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 31375113 - 31375248
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||| |||||||| |||||||| |||||| |||||||  ||| | |||||||| | | ||||||||   ||||||||||||||||||||||    
T  31375113 tccagaagtcctaactcaactgccaaaatgtcgaaattattaggccagatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtaagttt 31375212  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     |||| ||| |||||||||| ||||||||| ||||||    
T  31375213 ataatgact-ttgtcatttcgtctatctaaaaaaaaa 31375248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 127 - 254
Target Start/End: Original strand, 18813375 - 18813505
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    |||||||| ||||||||||||||||  ||||||||||||||| ||||| |||||||| | | ||||||||   |||||||||||||||| ||||| ||||    
T  18813375 aagtcctaactcaactggcaaaatgccgaaattgttaggccggatgtcatgaccgggcttcgaaccccggtacctccacttgtgtgtgtgagtttataat 18813474  T
Q  223 aactgttgtcatttcctctatctaacaaaaaa 254  Q
      || ||| |||||| |||||||| |||||||    
T  18813475 ggct-ttgccatttcgtctatctaccaaaaaa 18813505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 42154266 - 42154167
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||||| |||||||| | | ||||||||   |||||||||||||||| |||||    
T  42154266 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 42154167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 182
Target Start/End: Complemental strand, 53398416 - 53398356
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgg 182  Q
    |||||||||  |||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  53398416 tccacaagttttagctcaactggcaaaatgttgaaattgttaggctgaatgtcatgaccgg 53398356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 7512767 - 7512902
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||   |||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| |||||    
T  7512767 tccagaagtcctagctcaactggcaaaatgccaaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 7512866  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  7512867 ataatggct-ttgccatttcgtctatctaccaaaaaa 7512902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 222
Target Start/End: Original strand, 13389020 - 13389124
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| ||||||||||||||||||||||||| ||||||||||||| || ||||| |||||||| | | ||||||||   |||||||| ||||||| |||||    
T  13389020 tccagaagtcctagctcaactggcaaaatgctgaaattgttaggtcggatgtcatgaccggggttcgaaccccggtacctccacttatgtgtgtgagttt 13389119  T
Q  218 ctaat 222  Q
     ||||    
T  13389120 ataat 13389124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 24550813 - 24550948
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| ||||| |||||||||||||||||||  ||||||||||||||| ||||| ||| |||| | | ||||||||   |||||||||||||||| |||||    
T  24550813 tccagaagtcttagctcaactggcaaaatgccgaaattgttaggccggatgtcatgatcggggttcgaaccccggtacctccacttgtgtgtgtgagttt 24550912  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||||| |||||    
T  24550913 ataatggct-ttgccatttcgtctatctaaccaaaaa 24550948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 222
Target Start/End: Original strand, 24712088 - 24712192
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  |||||||||||| || ||||| |||||||| | | ||||||||   |||||||||||||||| |||||    
T  24712088 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggtcggatgtcatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 24712187  T
Q  218 ctaat 222  Q
     ||||    
T  24712188 ataat 24712192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 30044712 - 30044577
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | ||| |||| | | ||||||||   |||||||||||||||| |||||    
T  30044712 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgatcggggttcgaaccccggtacctccacttgtgtgtgtgagttt 30044613  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  30044612 ataatggct-ttgccatttcgtctatctaccaaaaaa 30044577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 130 - 254
Target Start/End: Complemental strand, 39284694 - 39284568
Alignment:
Q  130 tcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaataac 225  Q
    ||||||||||||||||||| ||  ||||||||||||||| ||||| |||||||| | | ||||||||   |||||||||||||||| ||||| |||| |     
T  39284694 tcctagctcaactggcaaa-tgccgaaattgttaggccggatgtcatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagtttataat-ag 39284597  T
Q  226 tgttgtcatttcctctatctaacaaaaaa 254  Q
    | |||||||||| |||||||| |||||||    
T  39284596 ttttgtcatttcgtctatctaccaaaaaa 39284568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 49882837 - 49882702
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccg-ggatacaaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | |||||| || |  ||||||||   |||||||||||||||| |||||    
T  49882837 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccgaggttcgaaccccggtacctccacttgtgtgtgtgagttt 49882738  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  49882737 ataatggct-ttgccatttcgtctatctaccaaaaaa 49882702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 1982561 - 1982622
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||||| ||||||||    
T  1982561 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccgtatgtcatgaccggg 1982622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 3848946 - 3848847
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||| ||||||| ||| | |||||||| | | ||||||||   ||||||||||||||||||||||    
T  3848946 tccagaagtcctagctcaactggcaaaatgccgaaattgctaggccggatgccatgaccggggttcgaaccccggtgcctccacttgtgtgtgtaagttt 3848847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 254
Target Start/End: Original strand, 24407502 - 24407632
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    |||||||||||||||||||||||||| |||||||||||| || ||| | |||||||||| | ||||||||   || ||||||||||||| | ||| ||||    
T  24407502 aagtcctagctcaactggcaaaatgtcgaaattgttaggtcggatgccatgaccgggattcgaaccccggtaccttcacttgtgtgtgtgaatttataat 24407601  T
Q  223 aactgttgtcatttcctctatctaacaaaaaa 254  Q
      ||  ||||||||| |||||||| |||||||    
T  24407602 ggct-ctgtcatttcgtctatctaccaaaaaa 24407632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 254
Target Start/End: Original strand, 28033197 - 28033327
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    |||||||||||||||||| ||||||  ||||||||||||||| ||| | |||||||| | | |||||| |   |||||||||||||||| ||||| ||||    
T  28033197 aagtcctagctcaactggtaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccagtatctccacttgtgtgtgtgagtttataat 28033296  T
Q  223 aactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||| ||| |||||| |||||||| |||||||    
T  28033297 gact-ttgccatttcgtctatctaccaaaaaa 28033327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 262
Target Start/End: Original strand, 37050706 - 37050844
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccg---gctccacttgtgtgtgtaagtttctaat 222  Q
    ||||| |||||||||||||||||||  ||||||||||||||| ||| | |||||||| | | |||||||   ||||||||| ||||||| ||||| ||||    
T  37050706 aagtcttagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccgatagctccacttatgtgtgtgagtttataat 37050805  T
Q  223 aactgttgtcatttcctctatctaacaaaaaatataaaat 262  Q
      || ||| |||||| |||||||| ||||||| |||||||    
T  37050806 ggct-ttgccatttcgtctatctaccaaaaaaaataaaat 37050844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 222
Target Start/End: Original strand, 37166143 - 37166242
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    |||||||||||||||||||||||||  ||||||||||||||| ||||| ||| |||| | | ||||||||   |||||||||||||||| ||||| ||||    
T  37166143 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgatcggggttcgaaccccggtacctccacttgtgtgtgtgagtttataat 37166242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 6487849 - 6487981
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||   |||||||  ||||||||||||||| |||||||||||||| | | ||||||||   |||||||||||||||| |||||    
T  6487849 tccagaagtcctagctcaac---caaaatgccgaaattgttaggccggatgtcgtgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 6487945  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  6487946 ataatggct-ttgccatttcgtctatctaccaaaaaa 6487981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 9064917 - 9064781
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg----ctccacttgtgtgtgtaagtt 216  Q
    ||||||||||||||||||||| | |||||| ||||||||||||| |||||| | | | |||| | | ||||||||    |||||||||||||||| ||||    
T  9064917 tccacaagtcctagctcaactagtaaaatgctgaaattgttaggtcgaatgccataatcggggttcgaaccccggtaccctccacttgtgtgtgtgagtt 9064818  T
Q  217 tctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
    | |||| ||| |||||||||  |||||||| |||||||    
T  9064817 tataatgact-ttgtcattttgtctatctaccaaaaaa 9064781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 132 - 222
Target Start/End: Original strand, 34684212 - 34684306
Alignment:
Q  132 ctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    ||||||||||||||||||||  ||||||||||||||| ||||| |||||||| | | ||||||||   |||||||||||||||| ||||| ||||    
T  34684212 ctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagtttataat 34684306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 12821165 - 12821298
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||  |||||    
T  12821165 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtg--agttt 12821262  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  12821263 ataatggct-ttgccatttcgtctatctaccaaaaaa 12821298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 29428055 - 29428190
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| ||||||||||||||||||||||||   ||||||||||||||| ||||| ||| |||| | | ||||||||   ||||||||||||| || |||||    
T  29428055 tccagaagtcctagctcaactggcaaaataccgaaattgttaggccggatgtcatgatcggggttcgaaccccggtacctccacttgtgtgagtgagttt 29428154  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  29428155 ataatggct-ttgccatttcgtctatctaccaaaaaa 29428190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 31263629 - 31263494
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||| |||||| |||| ||| ||| | |||||||| | | ||||||||   |||||||| ||||||| |||||    
T  31263629 tccagaagtcctagctcaactggcaaaatgtcgaaattattagaccggatgccatgaccggggttcgaaccccggtacctccacttatgtgtgtgagttt 31263530  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  31263529 ataatggct-ttgccatttcgtctatctaccaaaaaa 31263494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 35828279 - 35828367
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgt 211  Q
    |||||||||||||||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   ||||||||||||||||    
T  35828279 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgt 35828367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 50779919 - 50779815
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| ||||| ||| |||||||||||||||  ||||||||||||||| ||| | |||||||||| | ||||||||   |||||||||||||||| |||||    
T  50779919 tccagaagtcttagttcaactggcaaaatgccgaaattgttaggccggatgccatgaccgggattcgaaccccggttcctccacttgtgtgtgtgagttt 50779820  T
Q  218 ctaat 222  Q
     ||||    
T  50779819 ataat 50779815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 254
Target Start/End: Original strand, 18371351 - 18371481
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgac-cgggatacaaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    |||| ||||||||||||||||||||  |||||||||||||||||| || ||||  ||| |  ||||||||   |||||||| ||||||| ||||| ||||    
T  18371351 aagttctagctcaactggcaaaatgccgaaattgttaggccgaatatcatgactggggtttgaaccccggtacctccacttatgtgtgtgagtttataat 18371450  T
Q  223 aactgttgtcatttcctctatctaacaaaaaa 254  Q
      || |||||||||| |||||||| |||||||    
T  18371451 ggct-ttgtcatttcgtctatctatcaaaaaa 18371481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 253
Target Start/End: Complemental strand, 28010179 - 28010045
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||   |||||||||||| | || || |||||||| | | ||||||||   |||||||||||||||| |||||    
T  28010179 tccagaagtcctagctcaactggcaaaatgccaaaattgttaggcaggatatcatgaccggggttcgaaccccggtaactccacttgtgtgtgtgagttt 28010080  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaa 253  Q
     ||||  || ||| |||||| |||||||| ||||||    
T  28010079 ataatggct-ttgccatttcatctatctaccaaaaa 28010045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 1033572 - 1033516
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||||||||||||||||||||||||  ||||||||||||||| ||| | ||||||||    
T  1033572 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggg 1033516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 182
Target Start/End: Complemental strand, 23974770 - 23974710
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgg 182  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| || || |||||||    
T  23974770 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatatcatgaccgg 23974710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 254
Target Start/End: Complemental strand, 1053000 - 1052876
Alignment:
Q  133 tagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaataactgt 228  Q
    ||||||||||| |||||||| ||||||||||||||| ||||| |||||||| | | ||||| ||   |||||||||| ||||| ||||| ||||  || |    
T  1053000 tagctcaactgacaaaatgtcgaaattgttaggccggatgtcatgaccggggttcgaaccctggtacctccacttgtatgtgtgagtttataatggct-t 1052902  T
Q  229 tgtcatttcctctatctaacaaaaaa 254  Q
    | ||||||| |||||||| |||||||    
T  1052901 tatcatttcatctatctaccaaaaaa 1052876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 13632089 - 13632225
Alignment:
Q  122 tccacaagtcctagctcaactggc-aaaatgttgaaattgttaggccgaatgtcgtgaccg-ggatacaaccccgg---ctccacttgtgtgtgtaagtt 216  Q
    |||| ||||||||||||||||||| ||||||| ||||||||||||||| ||| | |||||| || |  |||||| |   |||||||||||||||| ||||    
T  13632089 tccagaagtcctagctcaactggcaaaaatgtcgaaattgttaggccggatgccatgaccgaggttcgaaccccagtacctccacttgtgtgtgtgagtt 13632188  T
Q  217 tctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
    | ||||  || ||| |||||| |||||||| |||||||    
T  13632189 tataatggct-ttgccatttcgtctatctatcaaaaaa 13632225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 35273435 - 35273388
Alignment:
Q  122 tccacaagtcctagctcaactggc-aaaatgttgaaattgttaggccg 168  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||    
T  35273435 tccacaagtcctagctcaactggcaaaaatgtcgaaattgttaggccg 35273388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 254
Target Start/End: Complemental strand, 579362 - 579235
Alignment:
Q  130 tcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaataac 225  Q
    ||||||||||||||  ||||||| ||||||||||||||| ||||| ||| |||| | | ||||||||   |||||||| ||||||| ||||| ||||  |    
T  579362 tcctagctcaactgataaaatgtcgaaattgttaggccggatgtcatgatcggggttcgaaccccggtacctccacttatgtgtgtgagtttataatggc 579263  T
Q  226 tgttgtcatttcctctatctaacaaaaaa 254  Q
    | ||| |||||| ||||||||| ||||||    
T  579262 t-ttgccatttcgtctatctaaaaaaaaa 579235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 262
Target Start/End: Complemental strand, 3802981 - 3802915
Alignment:
Q  196 ctccacttgtgtgtgtaagtttctaataactgttgtcatttcctctatctaacaaaaaatataaaat 262  Q
    |||||||||||||||| ||||| |||| ||| ||| |||||| |||||||| ||||||| |||||||    
T  3802981 ctccacttgtgtgtgtgagtttataatgacttttgccatttcgtctatctaccaaaaaaaataaaat 3802915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 14285095 - 14285230
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgg-gatacaaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| ||||||||||||||||| |||||||   |||||||||||||| ||| | ||||||| | |  ||||||||   |||||||||||||||| |||||    
T  14285095 tccagaagtcctagctcaactgacaaaatgccaaaattgttaggccggatgccatgaccggcgttcgaaccccggtacctccacttgtgtgtgtgagttt 14285194  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  14285195 ataatggct-ttgccatttcatctatctaccaaaaaa 14285230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 179
Target Start/End: Complemental strand, 17815271 - 17815213
Alignment:
Q  121 gtccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgac 179  Q
    ||||||||||||||| |||||||||||||||  |||||||||||| |||| ||| ||||    
T  17815271 gtccacaagtcctagttcaactggcaaaatgccgaaattgttaggtcgaacgtcatgac 17815213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 28983732 - 28983867
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||| ||||||||||||||||||||| || ||||||||| || ||| | |||||||| | | ||| ||||   |||||||| ||||||| |||||    
T  28983732 tccagaagttctagctcaactggcaaaatgtcgacattgttaggtcggatgccatgaccggggttcgaactccggtacctccacttatgtgtgtgagttt 28983831  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     |||| ||| |||||||||  |||||||| |||||||    
T  28983832 ataatgact-ttgtcattttgtctatctaccaaaaaa 28983867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 31436046 - 31435942
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||||||||||||| |||||||| ||||||  ||||||||||||||| ||||| |||  ||| | | ||||||||   |||||||||||||||| |||||    
T  31436046 tccacaagtcctagttcaactggtaaaatgccgaaattgttaggccggatgtcatgattggggttcgaaccccggtacctccacttgtgtgtgtgagttt 31435947  T
Q  218 ctaat 222  Q
     ||||    
T  31435946 ataat 31435942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 42856563 - 42856609
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||| |||||||||||||||||||||||||  |||||||||||||||    
T  42856563 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccg 42856609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 49535885 - 49535931
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||| |||||||||||||||||||||||||  |||||||||||||||    
T  49535885 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccg 49535931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 12694523 - 12694584
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||| ||||||||||||||||| ||||||| ||||| |||||||||| ||| | ||||||||    
T  12694523 tccagaagtcctagctcaactgacaaaatgctgaaactgttaggccggatgccatgaccggg 12694584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 32233690 - 32233758
Alignment:
Q  196 ctccacttgtgtgtgtaagtttctaataactgttgtcatttcctctatctaacaaaaaatataaaataaa 265  Q
    |||||||||||||||| ||||| |||| ||| |||||||||| |||||||||| ||||| | ||||||||    
T  32233690 ctccacttgtgtgtgtgagtttataatgact-ttgtcatttcgtctatctaaccaaaaaaaaaaaataaa 32233758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 35318540 - 35318601
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||| |||||||| ||||||||||||||||  ||||||||||||||| || || ||||||||    
T  35318540 tccagaagtcctaactcaactggcaaaatgccgaaattgttaggccggatatcatgaccggg 35318601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 49319731 - 49319792
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||| ||||||||||||||||  |||||||| ||||||||||||||| ||| | ||||||||    
T  49319731 tccagaagtcctagctcaactaacaaaatgtcgaaattgttaggccggatgccatgaccggg 49319792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 168
Target Start/End: Complemental strand, 54908015 - 54907974
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||||||||||||||||||||||||  |||||||||||||||    
T  54908015 aagtcctagctcaactggcaaaatgccgaaattgttaggccg 54907974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 5880409 - 5880353
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||||||| ||||||||||||||||| ||||||||||| ||| ||| | ||||||||    
T  5880409 aagtcctaactcaactggcaaaatgtcgaaattgttagaccggatgccatgaccggg 5880353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 8017855 - 8017911
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||| ||||||||||||  ||||||||||||||||||||||| ||||  ||||||||    
T  8017855 aagtactagctcaactgataaaatgttgaaattgttaggccggatgttatgaccggg 8017911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 3084370 - 3084327
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttagg 165  Q
    |||| |||||||||||||||||||||||||  ||||||||||||    
T  3084370 tccagaagtcctagctcaactggcaaaatgccgaaattgttagg 3084327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 127 - 166
Target Start/End: Complemental strand, 17846873 - 17846834
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggc 166  Q
    |||| ||||||||||||||||||||| |||||||||||||    
T  17846873 aagttctagctcaactggcaaaatgtcgaaattgttaggc 17846834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 32662728 - 32662685
Alignment:
Q  124 cacaagtcctagctcaactggcaaaatgttgaaattgttaggcc 167  Q
    ||||||||||||||||||| |||||||| | |||||||||||||    
T  32662728 cacaagtcctagctcaactagcaaaatgctaaaattgttaggcc 32662685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 164
Target Start/End: Original strand, 36608000 - 36608043
Alignment:
Q  121 gtccacaagtcctagctcaactggcaaaatgttgaaattgttag 164  Q
    ||||||||||||||| |||| ||||||||||| |||||||||||    
T  36608000 gtccacaagtcctagttcaattggcaaaatgtcgaaattgttag 36608043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 127 - 174
Target Start/End: Original strand, 46194254 - 46194301
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtc 174  Q
    ||||||||||||||||||||||||||  ||||||||||| || |||||    
T  46194254 aagtcctagctcaactggcaaaatgtcaaaattgttaggtcggatgtc 46194301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 254
Target Start/End: Complemental strand, 7944320 - 7944217
Alignment:
Q  154 gaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaataactgttgtcatttcctctatctaaca 249  Q
    ||||||||||||||| ||||| |||||||| | | ||||||||   |||||||||||||||| ||||| ||||  || ||| |||||| |||||||| ||    
T  7944320 gaaattgttaggccggatgtcatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagtttataatggct-ttgccatttcatctatctacca 7944222  T
Q  250 aaaaa 254  Q
    |||||    
T  7944221 aaaaa 7944217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 168
Target Start/End: Original strand, 26440975 - 26441013
Alignment:
Q  130 tcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  26440975 tcctagctcaactggcaaaatgccgaaattgttaggccg 26441013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 29648764 - 29648822
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgacc 180  Q
    |||| |||||||||||||||| ||||||||  ||| ||||||||||| ||||| |||||    
T  29648764 tccagaagtcctagctcaactagcaaaatgccgaatttgttaggccggatgtcatgacc 29648822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 42412116 - 42412012
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| ||||| |||||||||||||||||||  ||||||||||||||  ||| | |||||||| | | ||||||||   |||||||| ||||||| |||||    
T  42412116 tccagaagtcatagctcaactggcaaaatgccgaaattgttaggccagatgccatgaccggggttcgaaccccggtacctccacttatgtgtgtgagttt 42412017  T
Q  218 ctaat 222  Q
     ||||    
T  42412016 ataat 42412012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 4432022 - 4431993
Alignment:
Q  120 agtccacaagtcctagctcaactggcaaaa 149  Q
    ||||||||||||||||||||||||||||||    
T  4432022 agtccacaagtcctagctcaactggcaaaa 4431993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 166
Target Start/End: Original strand, 11673296 - 11673337
Alignment:
Q  125 acaagtcctagctcaactggcaaaatgttgaaattgttaggc 166  Q
    ||||||||||||||||||||||||||   |||||||||||||    
T  11673296 acaagtcctagctcaactggcaaaataccgaaattgttaggc 11673337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 168
Target Start/End: Complemental strand, 28187287 - 28187246
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||||||||||||||||  ||||||| |||||||||||||||    
T  28187287 aagtcctagctcaactgataaaatgtcgaaattgttaggccg 28187246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 243
Target Start/End: Original strand, 42116481 - 42116604
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg--ctccacttgtgtgtgtaagtttc 218  Q
    |||| ||| |||||||||||||| ||||||| |||||| ||||| || ||| | ||| |||| | | ||||||||  |||||||||||||||| |||||     
T  42116481 tccagaagccctagctcaactggtaaaatgtcgaaatttttaggtcggatgccatgatcggggttcgaaccccggtactccacttgtgtgtgtgagttta 42116580  T
Q  219 taataactgttgtcatttcctctat 243  Q
     ||| ||| |||||||||| |||||    
T  42116581 caatgact-ttgtcatttcatctat 42116604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 51281477 - 51281526
Alignment:
Q  133 tagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgg 182  Q
    |||||||||||||||||||  ||||||||||||||| ||| | |||||||    
T  51281477 tagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccgg 51281526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 182
Target Start/End: Original strand, 4379307 - 4379367
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgg 182  Q
    |||| ||||||||| ||||||| |||||||  ||||||||||||||| ||| | |||||||    
T  4379307 tccagaagtcctagttcaactgacaaaatgccgaaattgttaggccggatgccatgaccgg 4379367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 149
Target Start/End: Complemental strand, 21156085 - 21156057
Alignment:
Q  121 gtccacaagtcctagctcaactggcaaaa 149  Q
    |||||||||||||||||||||||||||||    
T  21156085 gtccacaagtcctagctcaactggcaaaa 21156057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 246
Target Start/End: Complemental strand, 25586445 - 25586328
Alignment:
Q  132 ctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaataactg 227  Q
    ||||||||||| ||||||||  ||||||||||||||| ||| | ||| |||| | | ||||||||   |||||||| ||||||| ||||| ||||  ||     
T  25586445 ctagctcaactagcaaaatgccgaaattgttaggccggatgccatgatcggggttcgaaccccggtacctccacttatgtgtgtgagtttataatggct- 25586347  T
Q  228 ttgtcatttcctctatcta 246  Q
    |||||||||| ||||||||    
T  25586346 ttgtcatttcgtctatcta 25586328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 5e-22; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 127 - 254
Target Start/End: Complemental strand, 43461457 - 43461327
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    |||||||||||||||||| ||||||| ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| ||||| ||||    
T  43461457 aagtcctagctcaactggtaaaatgtcgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagtttataat 43461358  T
Q  223 aactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||| |||||||||| |||||||| |||||||    
T  43461357 gact-ttgtcatttcgtctatctaccaaaaaa 43461327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 15897214 - 15897349
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||||| |||||||| | | ||||||||   |||||||||||||||| |||||    
T  15897214 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 15897313  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  15897314 ataatgcct-ttgccatttcgtctatctaccaaaaaa 15897349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 23497640 - 23497505
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| ||||||||| |||||||| ||||||  ||||||||||||||| |||||||||||||| | | ||||||||   |||||||||||||||| |||||    
T  23497640 tccagaagtcctagttcaactggtaaaatgccgaaattgttaggccggatgtcgtgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 23497541  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || |||||||||| |||||||| |||||||    
T  23497540 ataatggct-ttgtcatttcgtctatctaccaaaaaa 23497505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 4014941 - 4014806
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||||||||||||||||||||| |||||||  ||||||||||||||| || || |||||||| | | ||||||||   |||||||||||||||| |||||    
T  4014941 tccacaagtcctagctcaactgacaaaatgccgaaattgttaggccggatctcatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 4014842  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  4014841 ataatggct-ttgccatttcgtctatctaccaaaaaa 4014806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 34667044 - 34667179
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgg-gatacaaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||||| ||||||| | |  ||||||||   |||||||||||||||| |||||    
T  34667044 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgaccggagttcgaaccccggtacctccacttgtgtgtgtgagttt 34667143  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  34667144 ataatggct-ttgccatttcgtctatctaccaaaaaa 34667179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 35476618 - 35476514
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| |||||    
T  35476618 tccagaagtcctagctcaactggcaaaatgtcgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 35476519  T
Q  218 ctaat 222  Q
     ||||    
T  35476518 ataat 35476514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 45049385 - 45049520
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| ||||| |||||||||||||||||||| ||||||||||||||| ||||| |||||||| | | || |||||   |||||||||||||||| |||||    
T  45049385 tccagaagtcttagctcaactggcaaaatgtcgaaattgttaggccggatgtcatgaccggggttcgaatcccggtacctccacttgtgtgtgtgagttt 45049484  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  45049485 ataatggct-ttgccatttcgtctatctaccaaaaaa 45049520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 23080226 - 23080127
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||||| |||||||| | | ||||||||   |||||||||||||||| |||||    
T  23080226 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 23080127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 259
Target Start/End: Original strand, 23957052 - 23957192
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||| ||||||||||||||||||||| ||||||||||||||| ||||| ||| |||| | | ||||||||   |||||||| ||||||| |||||    
T  23957052 tccagaagttctagctcaactggcaaaatgtcgaaattgttaggccggatgtcatgatcggggttcgaaccccggtacctccacttatgtgtgtgagttt 23957151  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaatataa 259  Q
     ||||  || |||||||||| |||||||| | ||||| ||||    
T  23957152 ttaatggct-ttgtcatttcgtctatctacccaaaaaaataa 23957192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 6731542 - 6731677
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||| ||||||||  ||||||||||||||| ||||| |||||||| | | ||||||||    ||||||||||||||| |||||    
T  6731542 tccagaagtcctagctcaactagcaaaatgccgaaattgttaggccggatgtcatgaccggggttcgaaccccggtacatccacttgtgtgtgtgagttt 6731641  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  6731642 ataatggct-ttgccatttcgtctatctaccaaaaaa 6731677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 13268103 - 13267999
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  |||||||||||| || ||||| |||||||| | | ||||||||   |||||||||||||||| |||||    
T  13268103 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggtcggatgtcatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 13268004  T
Q  218 ctaat 222  Q
     ||||    
T  13268003 ataat 13267999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 36754869 - 36754734
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| |||   |||||||| | | ||||||||   |||||||||||||||| |||||    
T  36754869 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgctatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 36754770  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  36754769 ataatggct-ttgccatttcgtctatctaccaaaaaa 36754734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 122 - 217
Target Start/End: Original strand, 32023252 - 32023351
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| |||||    
T  32023252 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtgcctccacttgtgtgtgtgagttt 32023351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 35687914 - 35687780
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg--ctccacttgtgtgtgtaagtttc 218  Q
    |||| |||||||||||||||||  ||||||  ||||||||||||||| ||| | ||| |||||| | ||| ||||  |||||||| ||||| |||||||     
T  35687914 tccagaagtcctagctcaactgataaaatgccgaaattgttaggccggatgccatgatcgggattcgaactccggtactccacttatgtgtataagttta 35687815  T
Q  219 taataactgttgtcatttcctctatctaacaaaaaa 254  Q
    |||| ||| |||||||||| |||||||| |||||||    
T  35687814 taatgact-ttgtcatttcgtctatctaccaaaaaa 35687780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 223
Target Start/End: Complemental strand, 2287437 - 2287332
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| || || |||||||| | | ||||||||   |||||||||||||||  |||||    
T  2287437 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatatcatgaccggggttcgaaccccggtacctccacttgtgtgtgggagttt 2287338  T
Q  218 ctaata 223  Q
     |||||    
T  2287337 ataata 2287332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 211
Target Start/End: Complemental strand, 7975142 - 7975049
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgt 211  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||| |||   |||||||| | | ||||||||   ||||||||||||||||    
T  7975142 tccacaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgctatgaccggggttcgaaccccggtacctccacttgtgtgtgt 7975049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 38490528 - 38490392
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaag-tt 216  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | |||| ||| | | ||||||||   |||||||||||||||| || ||    
T  38490528 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgactggggttcgaaccccggtacctccacttgtgtgtgtgagttt 38490429  T
Q  217 tctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
    | |||| ||| ||| |||||| |||||||| |||||||    
T  38490428 tataatgact-ttgccatttcgtctatctaccaaaaaa 38490392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 222
Target Start/End: Original strand, 39070018 - 39070123
Alignment:
Q  121 gtccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtt 216  Q
    ||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| ||||    
T  39070018 gtccagaagtcctagctcaactggtaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagtt 39070117  T
Q  217 tctaat 222  Q
    | ||||    
T  39070118 tataat 39070123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 3048542 - 3048677
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||| ||||||||| ||||||||||||||| ||| | ||| |||| | | ||||||||   |||||||| ||||||| |||||    
T  3048542 tccataagtcctagctcaactagcaaaatgtcgaaattgttaggccggatgccatgatcggggttcgaaccccggtacctccacttatgtgtgtgagttt 3048641  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || || ||||||| |||||||| |||||||    
T  3048642 ttaatggct-ttatcatttcgtctatctaccaaaaaa 3048677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 12236121 - 12236256
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||| ||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| | |||    
T  12236121 tccagaagtcctagctcaactggtaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgaattt 12236220  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  12236221 ataatggct-ttgccatttcgtctatctaccaaaaaa 12236256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 183
Target Start/End: Complemental strand, 18469561 - 18469499
Alignment:
Q  121 gtccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    ||||| ||||||||||||||||||| |||||| ||||||||||||||||| ||| ||| ||||    
T  18469561 gtccataagtcctagctcaactggctaaatgtcgaaattgttaggccgaacgtcttgatcggg 18469499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 20251613 - 20251509
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | ||| |||| | | ||||||||   |||||||||||||||| |||||    
T  20251613 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgatcggggttcgaaccccggtacctccacttgtgtgtgtgagttt 20251514  T
Q  218 ctaat 222  Q
     ||||    
T  20251513 ataat 20251509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 255
Target Start/End: Original strand, 24381250 - 24381381
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    |||||||||||||||| ||||||||| ||||||||||||| | ||| | |||||||| | | ||||||||   |||| ||||||||||| ||||| ||||    
T  24381250 aagtcctagctcaactagcaaaatgtcgaaattgttaggctggatgccatgaccggggttcgaaccccggtacctccgcttgtgtgtgtgagtttataat 24381349  T
Q  223 aactgttgtcatttcctctatctaacaaaaaat 255  Q
      || ||| |||||| |||||||| ||||||||    
T  24381350 ggct-ttgccatttcgtctatctaccaaaaaat 24381381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 36794804 - 36794939
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||| |||||||  |||||||||||||||||| | ||| |||| | | |||| |||   |||||||||||||||| |||||    
T  36794804 tccagaagtcctagctcaactggtaaaatgtcaaaattgttaggccgaatgccatgatcggggttcgaacctcggttcctccacttgtgtgtgtgagttt 36794903  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  36794904 ataatggct-ttgccatttcgtctatctaccaaaaaa 36794939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 41164776 - 41164641
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||| ||| ||||||||||||||| || || |||||||| | | |||||| |   ||| |||| ||||||| |||||    
T  41164776 tccagaagtcctagctcaactggcaaagtgtcgaaattgttaggccggatatcatgaccggggttcgaaccccagtacctctacttatgtgtgtgagttt 41164677  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || |||||||||| |||||||| |||||||    
T  41164676 ataatggct-ttgtcatttcatctatctaccaaaaaa 41164641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 44948019 - 44948154
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| ||||||||||||||||| |||||||| ||||||||||||||| ||| | |||||||| | | ||| ||||   |||||||||| ||||| |||||    
T  44948019 tccagaagtcctagctcaactgacaaaatgtcgaaattgttaggccggatgccatgaccggggttcgaactccggtacctccacttgtatgtgtgagttt 44948118  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  44948119 ataatggct-ttgccatttcgtctatctaccaaaaaa 44948154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 4772303 - 4772364
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||| ||||| ||||||||||||||||||| |||||||||||||||| ||| | ||||||||    
T  4772303 tccataagtcatagctcaactggcaaaatgctgaaattgttaggccggatgccatgaccggg 4772364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 35706852 - 35706909
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgac 179  Q
    |||| |||||||||||||||||||||||||| |||||||||||| || ||||| ||||    
T  35706852 tccagaagtcctagctcaactggcaaaatgtcgaaattgttaggtcggatgtcatgac 35706909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 42007343 - 42007282
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||| |||||||||||||||||| ||||||| ||||||||||||||| ||| | ||||||||    
T  42007343 tccagaagtcctagctcaactggtaaaatgtcgaaattgttaggccggatgccatgaccggg 42007282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 42160385 - 42160324
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||||| ||| ||||    
T  42160385 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgatcggg 42160324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 10720453 - 10720507
Alignment:
Q  127 aagtcctagctcaactggcaaaa-tgttgaaattgttaggccgaatgtcgtgacc 180  Q
    ||||| ||||||||||||||||| |||| |||||||||||||||||||| |||||    
T  10720453 aagtcatagctcaactggcaaaaatgttaaaattgttaggccgaatgtcatgacc 10720507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 246
Target Start/End: Complemental strand, 16535071 - 16534944
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgg-gatacaaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| ||||||||| |||||||  ||||||| ||||||||||||||| ||||| ||| ||| | |  ||||||||   ||||||||| |||||| |||||    
T  16535071 tccagaagtcctagttcaactgataaaatgtcgaaattgttaggccggatgtcatgatcggagttcgaaccccggtaactccacttgggtgtgtgagttt 16534972  T
Q  218 ctaataactgttgtcatttcctctatcta 246  Q
     ||||| || |||||||||| ||||||||    
T  16534971 ataatagct-ttgtcatttcgtctatcta 16534944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 33607043 - 33607178
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccg---gctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||  ||| | |||| ||| | | |||||||    |||||||||||||||| |||||    
T  33607043 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccagatgccatgactggggttcgaaccccgatacctccacttgtgtgtgtgagttt 33607142  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  33607143 ataatggct-ttgccatttcgtctatctaccaaaaaa 33607178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 254
Target Start/End: Complemental strand, 36685453 - 36685396
Alignment:
Q  196 ctccacttgtgtgtgtaagtttctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
    |||||||||||||||| ||||| |||||||| |||||||||| |||||||| |||||||    
T  36685453 ctccacttgtgtgtgtgagtttataataact-ttgtcatttcgtctatctaccaaaaaa 36685396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 243
Target Start/End: Original strand, 39310371 - 39310490
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    |||||||||||||||| ||||||| | ||||||||||||||| ||||  ||| |||| | | ||| ||||   |||||||||||||||| ||||| ||||    
T  39310371 aagtcctagctcaactagcaaaatatcgaaattgttaggccggatgttatgatcggggttcgaactccggtaactccacttgtgtgtgtgagtttataat 39310470  T
Q  223 aactgttgtcatttcctctat 243  Q
    | || |||||||||| |||||    
T  39310471 agct-ttgtcatttcgtctat 39310490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 226
Target Start/End: Original strand, 40592313 - 40592421
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  |||||||||||| || ||| | |||||||| | | || |||||   ||||||||||| |||| |||||    
T  40592313 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggtcggatgccatgaccggggttcgaatcccggtatctccacttgtgcgtgtgagttt 40592412  T
Q  218 ctaataact 226  Q
     ||||||||    
T  40592413 ataataact 40592421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 42200990 - 42200886
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||   |||||||||||||| ||||| ||| |||| | | |||| |||   |||||||||||||||| |||||    
T  42200990 tccagaagtcctagctcaactggcaaaatgccaaaattgttaggccggatgtcatgatcggggttcgaacctcggtacctccacttgtgtgtgtgagttt 42200891  T
Q  218 ctaat 222  Q
     ||||    
T  42200890 ataat 42200886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 254
Target Start/End: Complemental strand, 34481794 - 34481664
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    |||||||||||||||||||||||||  ||||||||||||| | ||| | |||||||| | | ||||||||   |  ||||||||||||| ||||| ||||    
T  34481794 aagtcctagctcaactggcaaaatgccgaaattgttaggctggatgccatgaccggggttcgaaccccggtaccctcacttgtgtgtgtgagtttataat 34481695  T
Q  223 aactgttgtcatttcctctatctaacaaaaaa 254  Q
      || ||| |||||| |||||||| |||||||    
T  34481694 ggct-ttgccatttcgtctatctaccaaaaaa 34481664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 168
Target Start/End: Complemental strand, 12221274 - 12221226
Alignment:
Q  121 gtccacaagtcctagctcaactggc-aaaatgttgaaattgttaggccg 168  Q
    |||||| |||||||||||||||||| |||||| ||||||||||||||||    
T  12221274 gtccactagtcctagctcaactggcaaaaatgatgaaattgttaggccg 12221226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 23458680 - 23458724
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggc 166  Q
    ||||||||||||| ||||||||| |||||| ||||||||||||||    
T  23458680 tccacaagtcctaactcaactggaaaaatgctgaaattgttaggc 23458724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 7958112 - 7957979
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggat--acaaccccg--gctccacttgtgtgtgtaagttt 217  Q
    |||| ||||||||||||||||||||||||   ||||||||| ||||| ||| | |||||||| |  | ||||| |   |||||||||||||||  |||||    
T  7958112 tccagaagtcctagctcaactggcaaaataccgaaattgttgggccggatgccatgaccggggttcaaaacccagtatctccacttgtgtgtg--agttt 7958015  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||| || |||||||||| |||||||| |||||||    
T  7958014 ataatagct-ttgtcatttcgtctatctaccaaaaaa 7957979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 243
Target Start/End: Complemental strand, 8859415 - 8859291
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccg---gctccacttgtgtgtgtaagttt 217  Q
    |||| |||| |||| |||||| ||||||||| ||||||||||||||| ||||| |||  ||| | | |||||||    |||||||||||||||| |||||    
T  8859415 tccagaagttctagttcaactagcaaaatgtcgaaattgttaggccggatgtcatgattggggttcgaaccccgatacctccacttgtgtgtgtcagttt 8859316  T
Q  218 ctaataactgttgtcatttcctctat 243  Q
     |||| ||| |||||||||| |||||    
T  8859315 ataatgact-ttgtcatttcgtctat 8859291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 254
Target Start/End: Complemental strand, 15920727 - 15920607
Alignment:
Q  137 tcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaataactgttgtc 232  Q
    |||||||||||||||  ||||||||||||||| ||||| |||||||| | | ||||| ||   |||||||||||||| | ||||| ||||  || ||| |    
T  15920727 tcaactggcaaaatgccgaaattgttaggccggatgtcatgaccggggttcgaacccaggtacctccacttgtgtgtatgagtttataatggct-ttgcc 15920629  T
Q  233 atttcctctatctaacaaaaaa 254  Q
    ||||| |||||||| |||||||    
T  15920628 atttcgtctatctaccaaaaaa 15920607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 168
Target Start/End: Original strand, 31054055 - 31054094
Alignment:
Q  129 gtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||||||||||||||||||||||| || ||||||||||||    
T  31054055 gtcctagctcaactggcaaaatgtcgatattgttaggccg 31054094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 10392645 - 10392780
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgg-gatacaaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||| ||||||  || |||||||||||| ||| | ||||||| | |  ||||||||   |||||||||||||||| |||||    
T  10392645 tccagaagtcctagctcaactggtaaaatgccgacattgttaggccggatgccatgaccggagttcgaaccccggtatctccacttgtgtgtgtgagttt 10392744  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     | ||  || ||| |||||| |||||||| |||||||    
T  10392745 attatggct-ttgccatttcgtctatctaccaaaaaa 10392780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 254
Target Start/End: Complemental strand, 11816826 - 11816769
Alignment:
Q  196 ctccacttgtgtgtgtaagtttctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
    |||||||||||||||||||||| ||||  || |||||||||| |||||||| |||||||    
T  11816826 ctccacttgtgtgtgtaagtttataatggct-ttgtcatttcatctatctaccaaaaaa 11816769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 11816904 - 11816858
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||| |||||||||||||| ||| ||||||| |||||||||||||||    
T  11816904 tccagaagtcctagctcaattggtaaaatgtcgaaattgttaggccg 11816858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 16010741 - 16010695
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||| ||||| |||||||||||||||||||| |||||||||| ||||    
T  16010741 tccagaagtcgtagctcaactggcaaaatgtcgaaattgttaagccg 16010695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 165
Target Start/End: Original strand, 18368799 - 18368837
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttagg 165  Q
    |||||||||||||||||||||||||  ||||||||||||    
T  18368799 aagtcctagctcaactggcaaaatgccgaaattgttagg 18368837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 30854864 - 30854802
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaa-tgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    ||||||||||||| ||||||||  |||| ||| |||||||||||| |||||||| ||||||||    
T  30854864 tccacaagtcctaactcaactgataaaaatgtcgaaattgttaggacgaatgtcatgaccggg 30854802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 31516333 - 31516287
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    ||||||||||||| ||||||||| ||||||  |||||||||||||||    
T  31516333 tccacaagtcctaactcaactggaaaaatgccgaaattgttaggccg 31516287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 31819643 - 31819697
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccg 181  Q
    |||||||| ||||||||||||||||| |||||| |||||||| ||| | ||||||    
T  31819643 aagtcctaactcaactggcaaaatgtcgaaattattaggccggatggcatgaccg 31819697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 40812017 - 40812152
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||| |||||||| |||||||  |||||||||||| || ||||| |||||||| | | ||||||||   || ||||| ||||||| |||||    
T  40812017 tccagaagtcctacctcaactgacaaaatgccgaaattgttaggtcggatgtcatgaccggggttcgaaccccggtaccttcacttatgtgtgtgagttt 40812116  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  40812117 ataatggct-ttgccatttcgtctatctaccaaaaaa 40812152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 222
Target Start/End: Original strand, 43035440 - 43035544
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||| |||||||||   ||||||||||||||| ||||| ||| |||| | | ||||||||   ||| |||||||||||| |||||    
T  43035440 tccagaagtcctagctcaattggcaaaataccgaaattgttaggccggatgtcatgatcggggttcgaaccccggtacctctacttgtgtgtgtgagttt 43035539  T
Q  218 ctaat 222  Q
     ||||    
T  43035540 ataat 43035544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 182
Target Start/End: Complemental strand, 19134645 - 19134584
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaa-tgttgaaattgttaggccgaatgtcgtgaccgg 182  Q
    |||| |||||||||||||||||| |||| ||| ||||||||||||||  ||| |||||||||    
T  19134645 tccataagtcctagctcaactggaaaaaatgtcgaaattgttaggccagatgccgtgaccgg 19134584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 32120615 - 32120655
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||||||||||||||||||||||||  |||||||||||||||    
T  32120615 aagtcctagctcaactggcaaaatg-cgaaattgttaggccg 32120655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 433138 - 433182
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggc 166  Q
    |||| |||||||| |||||||| |||||||| |||||||||||||    
T  433138 tccagaagtcctaactcaactgacaaaatgtcgaaattgttaggc 433182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 149
Target Start/End: Original strand, 2349191 - 2349219
Alignment:
Q  121 gtccacaagtcctagctcaactggcaaaa 149  Q
    |||||||||||||||||||||||||||||    
T  2349191 gtccacaagtcctagctcaactggcaaaa 2349219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 7438030 - 7437986
Alignment:
Q  119 aagtccacaagtcctagctcaactggcaaaatgttgaaattgtta 163  Q
    ||||||||||||| ||||||||||||  |||||| ||||||||||    
T  7438030 aagtccacaagtcgtagctcaactggagaaatgtcgaaattgtta 7437986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 11011976 - 11012019
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggc 166  Q
    ||||||||||||||||||||| || ||||| ||||||||||||||    
T  11011976 tccacaagtcctagctcaactagc-aaatgctgaaattgttaggc 11012019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 16368811 - 16368755
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    ||||||||||||| ||||||||||   ||||||||||||||| ||||| ||| ||||    
T  16368811 aagtcctagctcatctggcaaaataccgaaattgttaggccggatgtcatgatcggg 16368755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 31525080 - 31525032
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaa 170  Q
    ||||||||| |||||||||||| |||||||  |||||||||| ||||||    
T  31525080 tccacaagttctagctcaactgacaaaatgccgaaattgttatgccgaa 31525032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 3e-20; HSPs: 75)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 4430863 - 4430728
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||||| |||||||| | | ||||||||   |||||||||||||||| |||||    
T  4430863 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 4430764  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  4430763 ataatggct-ttgccatttcgtctatctaccaaaaaa 4430728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 6317300 - 6317435
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||||| |||||||| | | ||||||||   |||||||||||||||| |||||    
T  6317300 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 6317399  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  6317400 ataatggct-ttgccatttcgtctatctaccaaaaaa 6317435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 127 - 254
Target Start/End: Original strand, 37295131 - 37295261
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    |||||||||||||||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| ||||| ||||    
T  37295131 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagtttataat 37295230  T
Q  223 aactgttgtcatttcctctatctaacaaaaaa 254  Q
      || |||||||||| |||||||| |||||||    
T  37295231 ggct-ttgtcatttcgtctatctaccaaaaaa 37295261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 127 - 254
Target Start/End: Original strand, 44814868 - 44814998
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    |||||||||||||||||||||||||  ||||||||||||||| ||||| |||||||| | | ||||||||   |||||||||||||||| ||||| ||||    
T  44814868 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagtttataat 44814967  T
Q  223 aactgttgtcatttcctctatctaacaaaaaa 254  Q
      || ||| |||||| |||||||| |||||||    
T  44814968 ggct-ttgccatttcatctatctaccaaaaaa 44814998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 2733616 - 2733750
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg--ctccacttgtgtgtgtaagtttc 218  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||||||  | |||||||||||||| |||||     
T  2733616 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtaccccacttgtgtgtgtgagttta 2733715  T
Q  219 taataactgttgtcatttcctctatctaacaaaaaa 254  Q
    ||||| || ||| |||||| |||||||| |||||||    
T  2733716 taatagct-ttgccatttcgtctatctaccaaaaaa 2733750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 14188090 - 14188227
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgacc-gggatacaaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||| ||| | ||||| ||| |  ||||||||   |||||||||||||||| |||||    
T  14188090 tccagaagtcctagctcaactggcaaaatgtcgaaattgttaggccggatgccatgacctgggttcgaaccccggtacctccacttgtgtgtgtgagttt 14188189  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaata 256  Q
     |||| ||| ||| |||||| |||||||| ||| |||||    
T  14188190 ataatgact-ttgccatttcgtctatctaccaataaata 14188227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 210
Target Start/End: Original strand, 2442762 - 2442854
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtg 210  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||| ||| | |||||||||| | ||||||||   |||||||||||||||    
T  2442762 tccataagtcctagctcaactggcaaaatgtcgaaattgttaggccggatgccatgaccgggattcaaaccccggtacctccacttgtgtgtg 2442854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 4694815 - 4694716
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatacaaccccgg----ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||| |||||||||||| || ||||| |||||||||| ||| ||| |    |||||||||||||||| |||||    
T  4694815 tccataagtcctagctcaactggcaaaatgtcgaaattgttaggtcggatgtcatgaccgggattcaaaccccgctacctccacttgtgtgtgtgagttt 4694716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 130 - 254
Target Start/End: Original strand, 20150229 - 20150356
Alignment:
Q  130 tcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aacccc---ggctccacttgtgtgtgtaagtttctaataac 225  Q
    |||||||||||||||||||||||  |||||||||||||| ||||| ||||||| || | ||||||     |||||||||||||||| ||||| ||||| |    
T  20150229 tcctagctcaactggcaaaatgtcaaaattgttaggccggatgtcatgaccggaattcgaaccccaatacctccacttgtgtgtgtgagtttataatagc 20150328  T
Q  226 tgttgtcatttcctctatctaacaaaaaa 254  Q
    | |||||||||| |||||||| |||||||    
T  20150329 t-ttgtcatttcgtctatctaccaaaaaa 20150356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 37708575 - 37708440
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  |||||||||||| || |||   |||||||| | | ||||||||   ||||||||||||||||||||||    
T  37708575 tccataagtcctagctcaactggcaaaatgccgaaattgttaggacggatgctatgaccggggttcgaaccccggtacctccacttgtgtgtgtaagttt 37708476  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || |||||||||| |||||||| |||||||    
T  37708475 ataatggct-ttgtcatttcgtctatctaccaaaaaa 37708440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 38070609 - 38070474
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | |||||||||| | |||| |||   |||||||||||||||| |||||    
T  38070609 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgacatgaccgggattcgaaccacggtacctccacttgtgtgtgtgagttt 38070510  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  38070509 ataatggct-ttgccatttcgtctatctatcaaaaaa 38070474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 38953608 - 38953473
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| ||||| |||||||||||||||||||  ||||||||||||||| ||||| |||||||| | | ||||||||   |||||||||||||||| |||||    
T  38953608 tccagaagtcttagctcaactggcaaaatgccgaaattgttaggccggatgtcatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 38953509  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  38953508 ataatggct-ttgccatttcgtctatctaccaaaaaa 38953473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 259
Target Start/End: Complemental strand, 19649626 - 19649486
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| ||||| |||||||||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||| ||||||| |||||    
T  19649626 tccagaagtcatagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttatgtgtgtgagttt 19649527  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaatataa 259  Q
     ||||  || |||||||||| |||||||| ||||||| ||||    
T  19649526 ataatggct-ttgtcatttcgtctatctaccaaaaaaaataa 19649486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 5895923 - 5895873
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatg 172  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  5895923 tccataagtcctagctcaactggcaaaatgtcgaaattgttaggccgaatg 5895873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 27928158 - 27928293
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||| ||| ||| | |||||||| | | ||||||||   |||||||||||||||| |||||    
T  27928158 tccagaagtcctagctcaactggcaaaatgccgaaattgttagaccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 27928257  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  27928258 ataatggct-ttgccatttcgtctatctatcaaaaaa 27928293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 34711683 - 34711548
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  |||||||||||| || ||| | |||||||| | | ||||||||   |||||||||||||||| |||||    
T  34711683 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggtcggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 34711584  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  34711583 ataatggct-ttgccatttcgtctatctaccaaaaaa 34711548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 36586482 - 36586617
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  |||||||||||| || ||| | |||||||| | | ||||||||   |||||||||| ||||| |||||    
T  36586482 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggtcggatgccatgaccggggttcgaaccccggtacctccacttgtatgtgtgagttt 36586581  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || |||||||||| |||||||| |||||||    
T  36586582 ataatggct-ttgtcatttcgtctatctaccaaaaaa 36586617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 122 - 261
Target Start/End: Complemental strand, 4977162 - 4977020
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| |   | |||||||| | | ||||||||   |||||||||||||||| |||||    
T  4977162 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggaccccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 4977063  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaatataaaa 261  Q
     ||||  || ||| |||||| |||||||| ||||||| ||||||    
T  4977062 ataatggct-ttgccatttcgtctatctaccaaaaaaaataaaa 4977020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 222
Target Start/End: Original strand, 25893856 - 25893955
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||| | ||| |||| | | ||||||||   ||||| |||||||||||||||| ||||    
T  25893856 aagtcctagctcaactggcaaaatgctgaaattgttaggccggatgccatgatcggggttcgaaccccggtacctccatttgtgtgtgtaagtttataat 25893955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 254
Target Start/End: Original strand, 26690699 - 26690829
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    |||||||||||||||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||| ||   |||||||||||||||| ||||| ||||    
T  26690699 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccctggtacctccacttgtgtgtgtgagtttataat 26690798  T
Q  223 aactgttgtcatttcctctatctaacaaaaaa 254  Q
      || ||| |||||| |||||||| |||||||    
T  26690799 ggct-ttgccatttcgtctatctaccaaaaaa 26690829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 35421746 - 35421685
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||| ||||||||| |||||||||||||||| ||||||||||||||||||| | ||||||||    
T  35421746 tccagaagtcctagttcaactggcaaaatgtcgaaattgttaggccgaatgccatgaccggg 35421685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 10096617 - 10096673
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||| | ||||||||    
T  10096617 aagtcctagctcaactggcaaaatgtcgaaattgttaggccggatgccatgaccggg 10096673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 244
Target Start/End: Complemental strand, 10286593 - 10286468
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| ||||||||||||||||||||||||||  |||||||||| ||||||  |||||  ||||| | ||||||||   |||||||||| ||||| |||||    
T  10286593 tccagaagtcctagctcaactggcaaaatgtcaaaattgttagaccgaataccgtgattgggattcgaaccccggtatctccacttgtatgtgtgagttt 10286494  T
Q  218 ctaataactgttgtcatttcctctatc 244  Q
     |||| ||| |||||||||| ||||||    
T  10286493 ataatgact-ttgtcatttcgtctatc 10286468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 211
Target Start/End: Original strand, 26737971 - 26738064
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgt 211  Q
    |||| |||||||||||||||||| ||||||  ||||||||||||||| ||||| |||||||| | | ||||||||   ||||||||||||||||    
T  26737971 tccagaagtcctagctcaactggtaaaatgccgaaattgttaggccggatgtcatgaccggggttcgaaccccggtacctccacttgtgtgtgt 26738064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 5682349 - 5682291
Alignment:
Q  124 cacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgg 182  Q
    |||||||||| |||||||| ||||||||||||||||||||||||| ||||  |||||||    
T  5682349 cacaagtcctcgctcaactagcaaaatgttgaaattgttaggccggatgttatgaccgg 5682291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 5704756 - 5704652
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgacc-gggatacaaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||  ||| | ||||| ||| |  ||||||||   |||||||||||||||| |||||    
T  5704756 tccacaagtcctagctcaactgacaaaatgtcgaaattgttaggccagatgccatgaccggggtttgaaccccggtacctccacttgtgtgtgtgagttt 5704657  T
Q  218 ctaat 222  Q
     ||||    
T  5704656 ataat 5704652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 7772178 - 7772074
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||| ||||||  ||||||||||||||| ||||| ||| |||| | | ||||||||   |||||||||||||||| |||||    
T  7772178 tccagaagtcctagctcaactggtaaaatgccgaaattgttaggccggatgtcatgatcggggttcgaaccccggtacctccacttgtgtgtgtgagttt 7772079  T
Q  218 ctaat 222  Q
     ||||    
T  7772078 ataat 7772074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 254
Target Start/End: Complemental strand, 9998766 - 9998635
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaag-tttctaa 221  Q
    ||||||||| |||||||||||||||  ||||||||||||||| || || |||||||| | | ||||||||   |||||||||||||||| || ||| |||    
T  9998766 aagtcctagttcaactggcaaaatgccgaaattgttaggccggatatcatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttttataa 9998667  T
Q  222 taactgttgtcatttcctctatctaacaaaaaa 254  Q
    | ||| ||| |||||| |||||||| |||||||    
T  9998666 tgact-ttgccatttcgtctatctaccaaaaaa 9998635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 222
Target Start/End: Original strand, 18040136 - 18040240
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||  |||||| |||||||||||||||| ||||| |||||  ||| | ||||||||   |||||||||||||||| |||||    
T  18040136 tccagaagtcctagctcaactgataaaatgctgaaattgttaggccggatgtcatgacccagattcgaaccccggtacctccacttgtgtgtgtgagttt 18040235  T
Q  218 ctaat 222  Q
     ||||    
T  18040236 ataat 18040240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 35810237 - 35810372
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgacc-gggatacaaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||||||||  |||||||||||||||||||  ||||||||||||||| ||| | ||||| ||| |  ||| ||||   |||||||| ||||| |||||||    
T  35810237 tccacaagttatagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggtttgaactccggtacctccacttttgtgtataagttt 35810336  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     |||| ||| |||||||||| ||||||||| ||||||    
T  35810337 ataatgact-ttgtcatttcgtctatctaaaaaaaaa 35810372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 246
Target Start/End: Original strand, 37817376 - 37817503
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccg---gctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  |||||||||||| || ||| | |||||||| | | |||||||    |||||||||||||||| |||||    
T  37817376 tccataagtcctagctcaactggcaaaatgacgaaattgttaggtcggatgccatgaccggggttcgaaccccgatacctccacttgtgtgtgtgagttt 37817475  T
Q  218 ctaataactgttgtcatttcctctatcta 246  Q
     ||||  || |||||||||| ||||||||    
T  37817476 ataatggct-ttgtcatttcgtctatcta 37817503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 258
Target Start/End: Original strand, 42922544 - 42922677
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    ||||| |||||||||||||||||||| ||||||||| |  || ||||||||| |||| | | ||||||||   |||||||| ||||||| ||||| ||||    
T  42922544 aagtcttagctcaactggcaaaatgtcgaaattgtttgatcggatgtcgtgatcggggttcgaaccccggtaactccacttatgtgtgtgagtttataat 42922643  T
Q  223 aactgttgtcatttcctctatctaacaaaaaatata 258  Q
      || |||||||||| ||||||||| ||||||||||    
T  42922644 cgct-ttgtcatttcgtctatctaa-aaaaaatata 42922677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 254
Target Start/End: Original strand, 10617790 - 10617919
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg--ctccacttgtgtgtgtaagtttctaata 223  Q
    ||||||||||||||||| |||||||  || |||||||||||| ||||| |||| ||| | | ||||||||  |||||||||| | ||| ||||| ||||     
T  10617790 aagtcctagctcaactgacaaaatgccgacattgttaggccggatgtcatgactggggttcgaaccccggtcctccacttgtatttgtgagtttataatg 10617889  T
Q  224 actgttgtcatttcctctatctaacaaaaaa 254  Q
    ||| ||| |||||| ||||||||| ||||||    
T  10617890 act-ttgccatttcgtctatctaaaaaaaaa 10617919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 25063339 - 25063475
Alignment:
Q  122 tccacaagtcctagctcaactggc-aaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtt 216  Q
    |||| ||||||||| ||||||||| ||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| ||||    
T  25063339 tccagaagtcctagttcaactggcaaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagtt 25063438  T
Q  217 tctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
    | ||||  || ||| |||||| |||||||| |||||||    
T  25063439 tataatggct-ttgccatttcgtctatctaccaaaaaa 25063475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 222
Target Start/End: Original strand, 1766710 - 1766815
Alignment:
Q  124 cacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccg-ggatacaaccccgg------ctccacttgtgtgtgtaagtt 216  Q
    ||||||||||||||||| || ||||||||||||||||||||| || |||  ||||||| || |  ||||||||      |||||||||||||||||||||    
T  1766710 cacaagtcctagctcaattgtcaaaatgttgaaattgttaggtcggatgctgtgaccgaggttcgaaccccggtacctcctccacttgtgtgtgtaagtt 1766809  T
Q  217 tctaat 222  Q
    | ||||    
T  1766810 tataat 1766815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 3054024 - 3054159
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatacaaccccgg---ctccacttgtgtgtgtaag-ttt 217  Q
    |||| |||| ||||||||||||||||||||  ||||||||||||||| ||| | |||| ||| |  || |||||   |||||||||||||||| || |||    
T  3054024 tccagaagttctagctcaactggcaaaatgccgaaattgttaggccggatgccatgactgggttcgaaacccggtgcctccacttgtgtgtgtgagtttt 3054123  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || |||||||||| |||||||| |||||||    
T  3054124 ataatggct-ttgtcatttcgtctatctaccaaaaaa 3054159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 4312133 - 4312268
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  |||||||||||| || ||| | |||| ||| | | ||| ||||   |||||||||||||||| |||||    
T  4312133 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggtcggatgccatgactggggttcgaactccggtacctccacttgtgtgtgtgagttt 4312232  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  4312233 ataatggct-ttgccatttcgtctatctaccaaaaaa 4312268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 254
Target Start/End: Original strand, 9569729 - 9569860
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaag-tttctaa 221  Q
    ||||| |||||||||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   ||||||||||| |||| || ||| |||    
T  9569729 aagtcttagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgggtgtgagttttataa 9569828  T
Q  222 taactgttgtcatttcctctatctaacaaaaaa 254  Q
    | ||| ||| |||||| |||||||| |||||||    
T  9569829 tgact-ttgccatttcgtctatctaccaaaaaa 9569860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 14243704 - 14243758
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccg 181  Q
    |||||||||||||||||| ||||||  ||||||||||||| ||||||| ||||||    
T  14243704 aagtcctagctcaactggtaaaatgccgaaattgttaggctgaatgtcatgaccg 14243758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 16395373 - 16395508
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||| ||||||||| |||||| |||||||||||||||| ||    |||||||| | | ||||||||   ||||| |||||||||| |||||    
T  16395373 tccagaagtcctaactcaactggtaaaatgctgaaattgttaggccggatactatgaccggggttcgaaccccggtacctccatttgtgtgtgtgagttt 16395472  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     |||| ||| ||| |||||| |||||||| |||||||    
T  16395473 ataatgact-ttgccatttcgtctatctaccaaaaaa 16395508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 20662522 - 20662657
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||| |||||| |  |||||| |||||||||||||||| ||| | |||||||| | | ||  ||||   |||||||||||||||| |||||    
T  20662522 tccagaagtcctacctcaaccgctaaaatgctgaaattgttaggccggatgccatgaccggggttcgaatgccggtacctccacttgtgtgtgtgagttt 20662621  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     |||| ||| |||||||||| |||||||| |||||||    
T  20662622 ataatgact-ttgtcatttcgtctatctaccaaaaaa 20662657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 222
Target Start/End: Original strand, 25199046 - 25199150
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||| ||||||  ||||||||||||||| |||   |||||||| | | ||||||||   |||||||||||||||| |||||    
T  25199046 tccagaagtcctagctcaactggtaaaatgccgaaattgttaggccggatgctatgaccgggtttcgaaccccggtacctccacttgtgtgtgtgagttt 25199145  T
Q  218 ctaat 222  Q
     ||||    
T  25199146 ataat 25199150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 222
Target Start/End: Original strand, 25250785 - 25250889
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||   |||||||||||||| ||| | |||||||| | | ||||||||   |||||||| ||||||| |||||    
T  25250785 tccagaagtcctagctcaactggcaaaatgccaaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttatgtgtgtgagttt 25250884  T
Q  218 ctaat 222  Q
     ||||    
T  25250885 ataat 25250889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 27545044 - 27544909
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||| ||||||||||||||||||||| |||||||||||| || ||||  || ||||| | | ||||||||   ||||||||||| |||| |||||    
T  27545044 tccagaagttctagctcaactggcaaaatgtcgaaattgttaggtcggatgttatgtccggggttcgaaccccggtacctccacttgtgcgtgtgagttt 27544945  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  27544944 ataatggct-ttgccatttcgtctatctaccaaaaaa 27544909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 254
Target Start/End: Complemental strand, 33067511 - 33067383
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    |||||||||||||||||||||||||  ||||||||||||||| ||| | ||| |||| | | ||| ||||   |||||||||||||||  ||||| ||||    
T  33067511 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgatcggggttcgaactccggtacctccacttgtgtgtg--agtttataat 33067414  T
Q  223 aactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||| ||| |||||| |||||||| |||||||    
T  33067413 gact-ttgccatttcgtctatctaccaaaaaa 33067383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 41562442 - 41562488
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||| |||||||||||||||||| ||||||| |||||||||||||||    
T  41562442 tccagaagtcctagctcaactggtaaaatgtcgaaattgttaggccg 41562488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 254
Target Start/End: Original strand, 26675562 - 26675692
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgacc-gggatacaaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    |||||||||||||||||| ||||||  ||||||||||||||| || || ||||| ||| |  ||||| ||   |||||||||||||||| ||||| ||||    
T  26675562 aagtcctagctcaactggtaaaatgccgaaattgttaggccggatatcatgaccggggtttgaaccctggtacctccacttgtgtgtgtgagtttataat 26675661  T
Q  223 aactgttgtcatttcctctatctaacaaaaaa 254  Q
      || ||| |||||| |||||||| |||||||    
T  26675662 ggct-ttgccatttcgtctatctaccaaaaaa 26675692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 28372473 - 28372522
Alignment:
Q  122 tccacaagtcctagctcaactggcaaa-atgttgaaattgttaggccgaa 170  Q
    ||||||||||||||||| |||| |||| ||||||||||||||||||||||    
T  28372473 tccacaagtcctagctctactgacaaagatgttgaaattgttaggccgaa 28372522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 37953788 - 37953829
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||||||||||||||||| ||||||| |||||||||||||||    
T  37953788 aagtcctagctcaactggaaaaatgtcgaaattgttaggccg 37953829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 39333945 - 39334002
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgac 179  Q
    |||||||||||||||| ||||||||||||| | || ||||||||||| ||||| ||||    
T  39333945 tccacaagtcctagcttaactggcaaaatgctaaacttgttaggccggatgtcatgac 39334002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 167
Target Start/End: Complemental strand, 40744370 - 40744325
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggcc 167  Q
    |||| ||||||||||||||||||||||||||  |||||||||||||    
T  40744370 tccagaagtcctagctcaactggcaaaatgtcaaaattgttaggcc 40744325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 6845106 - 6845050
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||||||||||||| ||||||||||  ||||||||||||||| ||| | ||||||||    
T  6845106 aagtcctagctcaattggcaaaatgccgaaattgttaggccggatgccatgaccggg 6845050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 8547258 - 8547206
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtc 174  Q
    |||| |||||||||||||||||||||||||  |||||||||||| || |||||    
T  8547258 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggtcggatgtc 8547206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 253
Target Start/End: Original strand, 23681015 - 23681144
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    |||||||| ||||||||||||||||   ||||| |||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| ||||| ||||    
T  23681015 aagtcctaactcaactggcaaaatgccaaaattattaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagtttataat 23681114  T
Q  223 aactgttgtcatttcctctatctaacaaaaa 253  Q
      || ||| |||||| |||||||| ||||||    
T  23681115 ggct-ttgccatttcgtctatctaccaaaaa 23681144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 130 - 254
Target Start/End: Original strand, 11565007 - 11565135
Alignment:
Q  130 tcctagctcaactggcaaaa-tgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaataa 224  Q
    ||||| |||||||||||||| || |||||||||||||||| |||   |||||||  | | ||| ||||   |||||||||||||| | ||||| ||||||    
T  11565007 tcctaactcaactggcaaaaatgctgaaattgttaggccggatgctatgaccggagttcgaactccggtacctccacttgtgtgtttgagtttataataa 11565106  T
Q  225 ctgttgtcatttcctctatctaacaaaaaa 254  Q
    || |||||||||| |||||||| |||||||    
T  11565107 ct-ttgtcatttcatctatctaccaaaaaa 11565135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 173
Target Start/End: Original strand, 14725304 - 14725355
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgt 173  Q
    ||||||| ||||||||||||||  ||||||| ||||||||||||||| ||||    
T  14725304 tccacaaatcctagctcaactgataaaatgtcgaaattgttaggccgtatgt 14725355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 130 - 172
Target Start/End: Original strand, 16816833 - 16816876
Alignment:
Q  130 tcctagctcaactggcaaaa-tgttgaaattgttaggccgaatg 172  Q
    |||||||||||||||||||| ||| |||||||||||||||||||    
T  16816833 tcctagctcaactggcaaaaatgtcgaaattgttaggccgaatg 16816876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 165
Target Start/End: Original strand, 35222273 - 35222316
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttagg 165  Q
    ||||||| ||||||||||||||| ||||||| ||||||||||||    
T  35222273 tccacaaatcctagctcaactggtaaaatgtcgaaattgttagg 35222316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 403665 - 403727
Alignment:
Q  121 gtccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||||||||||||||||||||||  ||||||  |||||||||||| || ||| | ||||||||    
T  403665 gtccacaagtcctagctcaactgataaaatgccgaaattgttaggtcggatgccatgaccggg 403727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 163
Target Start/End: Complemental strand, 7432624 - 7432582
Alignment:
Q  121 gtccacaagtcctagctcaactggcaaaatgttgaaattgtta 163  Q
    |||| ||||||||||||||||||||||||||  ||||||||||    
T  7432624 gtccgcaagtcctagctcaactggcaaaatgccgaaattgtta 7432582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 11098202 - 11098067
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||| |||||||| |||||| | |||||||||||| |||||||| |||| ||| | | ||||||||   | |||||| | ||||| |||||    
T  11098202 tccagaagtcctaactcaactgacaaaatatcgaaattgttaggtcgaatgtcatgactggggttcgaaccccggttccaccacttatatgtgtgagttt 11098103  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || |||||||||| |||||||| |||||||    
T  11098102 ataattgct-ttgtcatttcatctatctaccaaaaaa 11098067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 11100416 - 11100370
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||| |||||||||||||||||| ||||||  |||||||||||||||    
T  11100416 tccagaagtcctagctcaactggaaaaatgccgaaattgttaggccg 11100370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 164
Target Start/End: Complemental strand, 24420115 - 24420073
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttag 164  Q
    ||||||||||||| ||||| ||||||||||| |||||||||||    
T  24420115 tccacaagtcctaactcaattggcaaaatgtcgaaattgttag 24420073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 24654974 - 24655020
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||| |||||||||||||||||||||||||   ||||||||||||||    
T  24654974 tccagaagtcctagctcaactggcaaaatgccaaaattgttaggccg 24655020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 31639230 - 31639095
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||| ||||||| ||||||||  ||||||||||||||| ||| | |||||||| | | ||| ||||   |||||||| |||||||  ||||    
T  31639230 tccagaagtcctaactcaactagcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaactccggtacctccacttatgtgtgtgggttt 31639131  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     |||| ||| ||| |||||| |||||||| |||||||    
T  31639130 ataatgact-ttgccatttcgtctatctaccaaaaaa 31639095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 43820868 - 43820914
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||| |||||||| ||||||||||||||||  |||||||||||||||    
T  43820868 tccagaagtcctaactcaactggcaaaatgccgaaattgttaggccg 43820914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 254
Target Start/End: Complemental strand, 17649961 - 17649835
Alignment:
Q  130 tcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatacaaccccgg---ctccacttgtgtgtgtaagtttctaataact 226  Q
    |||||||||||||||||||||   |||||||||| |||| ||||| ||| |||| |  ||||||||   |||||||| || |||| ||||| |||  |||    
T  17649961 tcctagctcaactggcaaaataccgaaattgttaagccggatgtcatgatcgggttcgaaccccggtacctccacttatgcgtgtgagtttataaagact 17649862  T
Q  227 gttgtcatttcctctatctaacaaaaaa 254  Q
     |||||| ||| |||||||| |||||||    
T  17649861 -ttgtcaattcgtctatctaccaaaaaa 17649835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 164
Target Start/End: Original strand, 25213634 - 25213671
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttag 164  Q
    |||||||||||||||||||||||||  |||||||||||    
T  25213634 aagtcctagctcaactggcaaaatgccgaaattgttag 25213671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 168
Target Start/End: Complemental strand, 34540187 - 34540146
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    ||||||||| |||||||||||||||  |||||||||||||||    
T  34540187 aagtcctagttcaactggcaaaatgccgaaattgttaggccg 34540146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 3673887 - 3673832
Alignment:
Q  202 ttgtgtgtgtaagtttctaataactgttgtcatttcctctatctaacaaaaaatata 258  Q
    |||||||||| ||||| |||| ||| |||||||||| |||||||| |||||||||||    
T  3673887 ttgtgtgtgtgagtttataatgact-ttgtcatttcgtctatctaccaaaaaatata 3673832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 10006151 - 10006207
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    ||||| ||||||||||||||||||||  |||||||||| ||| ||||| ||| ||||    
T  10006151 aagtcttagctcaactggcaaaatgtcaaaattgttagaccggatgtcatgatcggg 10006207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 178
Target Start/End: Complemental strand, 11265184 - 11265128
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtga 178  Q
    |||| ||||||||| ||||||| ||||||||  |||||||||||||| ||| |||||    
T  11265184 tccagaagtcctagttcaactgacaaaatgtcaaaattgttaggccggatgccgtga 11265128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 254
Target Start/End: Complemental strand, 27817555 - 27817442
Alignment:
Q  144 gcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaataactgttgtcatttcct 239  Q
    ||||||||  ||||||||||| ||| ||||| |||||||| | | ||||||||   |||||||||||||||| ||||| ||||  || ||| |||||| |    
T  27817555 gcaaaatgccgaaattgttagaccggatgtcatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagtttataatggct-ttgccatttcgt 27817457  T
Q  240 ctatctaacaaaaaa 254  Q
    ||||||| |||||||    
T  27817456 ctatctaccaaaaaa 27817442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 39068527 - 39068483
Alignment:
Q  126 caagtcctagctcaactggcaaaatgttgaaattgttaggccgaa 170  Q
    ||||||||||||||||||| |||| ||  ||||||||||||||||    
T  39068527 caagtcctagctcaactggtaaaacgtcaaaattgttaggccgaa 39068483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 40999764 - 40999816
Alignment:
Q  133 tagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggat 185  Q
    |||||||||||  ||||||| ||||||||||||||| ||| | ||||||||||    
T  40999764 tagctcaactgataaaatgtcgaaattgttaggccggatgccatgaccgggat 40999816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 3e-20; HSPs: 75)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 4164959 - 4165094
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||||| |||||||| | | ||||||||   |||||||||||||||| |||||    
T  4164959 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 4165058  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  4165059 ataatggct-ttgccatttcgtctatctaccaaaaaa 4165094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 24652442 - 24652307
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||| ||||||||||||||||| ||||||||||||||| ||| | ||||||||||   ||||||||   |||||||||||||||| |||||    
T  24652442 tccagaagtcctaactcaactggcaaaatgtcgaaattgttaggccggatgccatgaccgggatttgaaccccggtacctccacttgtgtgtgtgagttt 24652343  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| ||||||||||||||||    
T  24652342 ataatggct-ttgccatttcgtctatctaacaaaaaa 24652307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 36136990 - 36136855
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||| ||||||||  |||||||||||||||||||   |||||||| | | ||||||||   |||||||||||||||| |||||    
T  36136990 tccagaagtcctagctcaactagcaaaatgccgaaattgttaggccgaatgctatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 36136891  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     |||||| | |||||||||| |||||||| |||||||    
T  36136890 ataataa-ttttgtcatttcgtctatctaccaaaaaa 36136855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 42448211 - 42448346
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| |||||    
T  42448211 tccagaagtcctagctcaactggcaaaatgtcgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 42448310  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  42448311 ataatggct-ttgccatttcgtctatctaccaaaaaa 42448346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 260
Target Start/End: Original strand, 36726989 - 36727128
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatacaaccccgg---ctccacttgtgtgtgtaagtttc 218  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | |||||||| |  ||||||||   |||||||||| ||||| |||||     
T  36726989 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggt-gaaccccggtacctccacttgtctgtgtgagttta 36727087  T
Q  219 taataactgttgtcatttcctctatctaacaaaaaatataaa 260  Q
    |||| ||| ||| |||||| |||||||| ||||||| |||||    
T  36727088 taatgact-ttgccatttcgtctatctaccaaaaaaaataaa 36727128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 181
Target Start/End: Original strand, 39143441 - 39143500
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccg 181  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||    
T  39143441 tccacaagtcctagctcaactggcaaaatgtcgaaattgttaggccgaatgccatgaccg 39143500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 2103026 - 2103162
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | ||| |||||| | ||||||||   || ||||||||||||| |||||    
T  2103026 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgatcgggattcgaaccccggtacctacacttgtgtgtgtgagttt 2103125  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  2103126 ataatggcttttgccatttcgtctatctaccaaaaaa 2103162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 16496600 - 16496735
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| ||||||||| |||||||||||||||| ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| |||||    
T  16496600 tccagaagtcctagttcaactggcaaaatgtcgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 16496699  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  16496700 ataatggct-ttgccatttcgtctatctaccaaaaaa 16496735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 36569279 - 36569414
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| |||||    
T  36569279 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 36569378  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  36569379 ataatggct-ttgccatttcgtctatctaccaaaaaa 36569414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 39151054 - 39150919
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||| ||||||| ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| |||||    
T  39151054 tccagaagtcctagctcaactggtaaaatgtcgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 39150955  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  39150954 ataatggct-ttgacatttcgtctatctaccaaaaaa 39150919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 126 - 254
Target Start/End: Original strand, 40595961 - 40596091
Alignment:
Q  126 caagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaa 221  Q
    ||||||||||||||||||||||||||  ||||||||||||||| ||| | |||| ||| | | ||||||||   |||||||||||||||| ||||| |||    
T  40595961 caagtcctagctcaactggcaaaatgccgaaattgttaggccg-atgccatgactggggttcgaaccccggtacctccacttgtgtgtgtgagtttataa 40596059  T
Q  222 taactgttgtcatttcctctatctaacaaaaaa 254  Q
    | ||| |||||||||| |||||||| |||||||    
T  40596060 tgact-ttgtcatttcgtctatctaccaaaaaa 40596091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 264
Target Start/End: Original strand, 18473914 - 18474059
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| || ||    
T  18473914 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgaggtt 18474013  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaatataaaataa 264  Q
     ||||  || ||| |||||| |||||||| ||||||| | |||||||    
T  18474014 ataatggct-ttgccatttcgtctatctaccaaaaaaaaaaaaataa 18474059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 4617894 - 4617790
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||| ||||||| ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| |||||    
T  4617894 tccagaagtcctagctcaactggtaaaatgtcgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 4617795  T
Q  218 ctaat 222  Q
     ||||    
T  4617794 ataat 4617790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 222
Target Start/End: Original strand, 6672241 - 6672345
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| |||||    
T  6672241 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 6672340  T
Q  218 ctaat 222  Q
     ||||    
T  6672341 ataat 6672345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 9054099 - 9053964
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccg---gctccacttgtgtgtgtaagttt 217  Q
    |||| ||||||||||||||||||||||||   ||||||||||||||| ||| | |||||||| | | |||||||    |||||||||||||||| |||||    
T  9054099 tccagaagtcctagctcaactggcaaaataccgaaattgttaggccggatgccatgaccggggttcgaaccccgatacctccacttgtgtgtgtgagttt 9054000  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || |||||||||| |||||||| |||||||    
T  9053999 ataatggct-ttgtcatttcgtctatctaccaaaaaa 9053964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 23311301 - 23311166
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||| ||||||| |||||    
T  23311301 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttatgtgtgtgagttt 23311202  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  23311201 ataatggct-ttgccatttcgtctatctaccaaaaaa 23311166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 26802334 - 26802469
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| ||||| || ||||||||||||||||   |||||||||||||||||||| |||||||| | | ||||||||   |||||||||||||||| |||||    
T  26802334 tccagaagtcttaactcaactggcaaaatgccaaaattgttaggccgaatgtcatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 26802433  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  26802434 ataatggct-ttgccatttcgtctatctaccaaaaaa 26802469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 26809884 - 26810019
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| ||||| || ||||||||||||||||   |||||||||||||||||||| |||||||| | | ||||||||   |||||||||||||||| |||||    
T  26809884 tccagaagtcttaactcaactggcaaaatgccaaaattgttaggccgaatgtcatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 26809983  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  26809984 ataatggct-ttgccatttcgtctatctaccaaaaaa 26810019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 26824911 - 26825046
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| ||||| || ||||||||||||||||   |||||||||||||||||||| |||||||| | | ||||||||   |||||||||||||||| |||||    
T  26824911 tccagaagtcttaactcaactggcaaaatgccaaaattgttaggccgaatgtcatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 26825010  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  26825011 ataatggct-ttgccatttcgtctatctaccaaaaaa 26825046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 132 - 254
Target Start/End: Complemental strand, 4430059 - 4429934
Alignment:
Q  132 ctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatacaaccccgg----ctccacttgtgtgtgtaagtttctaataactg 227  Q
    ||||||||||||| ||||||| ||||||||||||||| ||||| |||||||| | ||| ||| |    |||||||| ||||||| ||||| ||||||||     
T  4430059 ctagctcaactggtaaaatgtcgaaattgttaggccggatgtcatgaccggggttcaaaccccgatacctccacttatgtgtgtgagtttataataact- 4429961  T
Q  228 ttgtcatttcctctatctaacaaaaaa 254  Q
    || ||||||| |||||| || ||||||    
T  4429960 ttatcatttcgtctatcaaaaaaaaaa 4429934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 254
Target Start/End: Complemental strand, 10393625 - 10393495
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    |||||||||||||||||| ||||||  |||||| |||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| ||||| ||||    
T  10393625 aagtcctagctcaactggaaaaatgccgaaattattaggccggatgccttgaccggggttcgaaccccggtacctccacttgtgtgtgtgagtttataat 10393526  T
Q  223 aactgttgtcatttcctctatctaacaaaaaa 254  Q
      || |||||||||| |||||||| |||||||    
T  10393525 ggct-ttgtcatttcgtctatctaccaaaaaa 10393495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 254
Target Start/End: Complemental strand, 25328427 - 25328297
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccg-ggatacaaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    |||||||||||||||||||||||||  ||||||||||||||| ||| | |||||| || |  ||||||||   |||||||||||||||| ||||| ||||    
T  25328427 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccgaggttcgaaccccggtacctccacttgtgtgtgtgagtttataat 25328328  T
Q  223 aactgttgtcatttcctctatctaacaaaaaa 254  Q
      || ||| |||||| |||||||| |||||||    
T  25328327 ggct-ttgccatttcgtctatctaccaaaaaa 25328297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 254
Target Start/End: Original strand, 29119611 - 29119741
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    |||||||||||||||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||| ||   |||||||||||||||| ||||| ||||    
T  29119611 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccctggtacctccacttgtgtgtgtgagtttataat 29119710  T
Q  223 aactgttgtcatttcctctatctaacaaaaaa 254  Q
      || ||| |||||| |||||||| |||||||    
T  29119711 ggct-ttgccatttcgtctatctaccaaaaaa 29119741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 1277437 - 1277573
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaa-tgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtt 216  Q
    |||||||||||||||||| ||| ||||| ||  ||||||||||||||| ||| | |||| ||||| | |||| |||   |||||||||||||||| ||||    
T  1277437 tccacaagtcctagctcagctgccaaaaatgccgaaattgttaggccggatgccatgacagggattcgaacctcggtacctccacttgtgtgtgtgagtt 1277536  T
Q  217 tctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
    | |||| ||| |||||||||| |||||||| |||||||    
T  1277537 tataatgact-ttgtcatttcgtctatctaccaaaaaa 1277573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 23074773 - 23074637
Alignment:
Q  122 tccacaagtcctagctcaactggc-aaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtt 216  Q
    |||| ||||||||||||||||||| ||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| ||||    
T  23074773 tccagaagtcctagctcaactggcaaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagtt 23074674  T
Q  217 tctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
    | ||||  || ||| |||||| |||||||| |||||||    
T  23074673 tataatggct-ttgccatttcgtctatctaccaaaaaa 23074637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 254
Target Start/End: Original strand, 34930236 - 34930360
Alignment:
Q  133 tagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaataactgt 228  Q
    |||||||||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| ||||| ||||  || |    
T  34930236 tagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagtttataatggct-t 34930334  T
Q  229 tgtcatttcctctatctaacaaaaaa 254  Q
    || |||||| |||||||| |||||||    
T  34930335 tgccatttcgtctatctaccaaaaaa 34930360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 222
Target Start/End: Original strand, 6029612 - 6029716
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| ||||||||||||||||||||||||||  |||||||||||||| ||||| || | ||| | | ||||||||   |||||||||||||||| |||||    
T  6029612 tccagaagtcctagctcaactggcaaaatgtcaaaattgttaggccggatgtcatgcctggggttcgaaccccggtacctccacttgtgtgtgtgagttt 6029711  T
Q  218 ctaat 222  Q
     ||||    
T  6029712 ataat 6029716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 17869252 - 17869117
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||| ||||||| | |||    
T  17869252 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttatgtgtgtgaattt 17869153  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  17869152 ataatggct-ttgccatttcgtctatctaccaaaaaa 17869117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 19836210 - 19836152
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggat 185  Q
    |||||||||||||||||||||||||| |||||||||||| || |||  |||||||||||    
T  19836210 aagtcctagctcaactggcaaaatgtcgaaattgttaggtcggatgctgtgaccgggat 19836152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 28143360 - 28143256
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | |||| ||| | | ||||||||   |||||||||||||||| |||||    
T  28143360 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgactggggttcgaaccccggtacctccacttgtgtgtgtgagttt 28143261  T
Q  218 ctaat 222  Q
     ||||    
T  28143260 ataat 28143256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 246
Target Start/End: Complemental strand, 36319630 - 36319503
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| ||||||||||||||||||||||||  |||||||||||||||| ||| | |||| ||| | | ||||||||   |||||||||||||||| | |||    
T  36319630 tccaaaagtcctagctcaactggcaaaatactgaaattgttaggccggatgccatgacaggggttcgaaccccggtacctccacttgtgtgtgtgaattt 36319531  T
Q  218 ctaataactgttgtcatttcctctatcta 246  Q
     ||||  || |||||||||| ||||||||    
T  36319530 ataatggct-ttgtcatttcgtctatcta 36319503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 1244309 - 1244248
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | ||||||||    
T  1244309 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggg 1244248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 37940923 - 37940964
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  37940923 aagtcctagctcaactggcaaaatgtcgaaattgttaggccg 37940964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 12878246 - 12878194
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtc 174  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| |||||    
T  12878246 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtc 12878194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 182
Target Start/End: Original strand, 41562458 - 41562518
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgg 182  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | |||||||    
T  41562458 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccgg 41562518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 185
Target Start/End: Complemental strand, 7179429 - 7179366
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggat 185  Q
    |||| |||| ||||||||||||||||||||| ||||||||||||||  ||| | ||||||||||    
T  7179429 tccagaagttctagctcaactggcaaaatgtcgaaattgttaggccagatgccatgaccgggat 7179366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 671187 - 671052
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccg---gctccacttgtgtgtgtaagttt 217  Q
    |||| ||||||||| |||||||||||||||  |||||||||||| || ||||| ||| |||| | | |||||||    |||||| ||||||||| |||||    
T  671187 tccagaagtcctagttcaactggcaaaatgccgaaattgttaggtcggatgtcatgatcggggttcgaaccccgatacctccacgtgtgtgtgtgagttt 671088  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     |||| ||| ||| |||||| |||||||| |||||||    
T  671087 ataatgact-ttgccatttcgtctatctaccaaaaaa 671052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 1269647 - 1269601
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||| ||||||||||||||||| |||||||| |||||||||||||||    
T  1269647 tccagaagtcctagctcaactgacaaaatgtcgaaattgttaggccg 1269601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 222
Target Start/End: Original strand, 1287315 - 1287419
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||| ||| ||||||  |||||||||||| || ||||| |||||||| | | ||||||||   |||||||||||||||| |||||    
T  1287315 tccagaagtcctagctcaattggtaaaatgccgaaattgttaggtcggatgtcatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 1287414  T
Q  218 ctaat 222  Q
     ||||    
T  1287415 ataat 1287419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 11968776 - 11968911
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||| |||||||| |||||||| ||||||||||||||| ||| | |||||||| | | |||||| |   |||||||||||||| | |||||    
T  11968776 tccagaagtcctaactcaactgtcaaaatgtcgaaattgttaggccggatgccatgaccggggttcgaaccccagtacctccacttgtgtgtatgagttt 11968875  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  11968876 ataatggct-ttgccatttcgtctatctaccaaaaaa 11968911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 246
Target Start/End: Original strand, 24051403 - 24051530
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||| |||||||||||||||| | ||||| |||||||| ||| | |||||||| | | ||||| ||   |||||||||||| ||| |||||    
T  24051403 tccagaagtcctaactcaactggcaaaatgctaaaattattaggccggatgccatgaccggggttcgaaccctggtacctccacttgtgtatgtgagttt 24051502  T
Q  218 ctaataactgttgtcatttcctctatcta 246  Q
     |||| ||| |||||||||| ||||||||    
T  24051503 ataatgact-ttgtcatttcgtctatcta 24051530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 24443995 - 24443891
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| ||||||||||||||||||||||||   |||||||||||| || ||||  |||||||| | | ||||||||   |||||||||||||||| |||||    
T  24443995 tccagaagtcctagctcaactggcaaaataccgaaattgttaggtcggatgttatgaccggggttcaaaccccggtacctccacttgtgtgtgtgagttt 24443896  T
Q  218 ctaat 222  Q
     ||||    
T  24443895 ataat 24443891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 37142154 - 37142108
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||| ||||||||||| ||||||||||||| ||||||||||||||||    
T  37142154 tccagaagtcctagcttaactggcaaaatgctgaaattgttaggccg 37142108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 222
Target Start/End: Original strand, 42068541 - 42068645
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| ||||||||||||| |||||||||||  ||||||||||||| | ||| | |||||||| | | ||||||||   |||||||||||||||| |||||    
T  42068541 tccagaagtcctagctcagctggcaaaatgccgaaattgttaggctggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 42068640  T
Q  218 ctaat 222  Q
     ||||    
T  42068641 ataat 42068645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 4228865 - 4228906
Alignment:
Q  130 tcctagctcaactggcaaaatgttgaaattgttaggccgaat 171  Q
    ||||||||||||||||||||||| ||||||||||| ||||||    
T  4228865 tcctagctcaactggcaaaatgtcgaaattgttagaccgaat 4228906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 6041972 - 6041873
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||| ||||||| |||||| |||||||| |||   |||||||||| | ||||||||   || ||||||||||||| |||||    
T  6041972 tccagaagtcctagctcaactggtaaaatgtcgaaattattaggccggatgctatgaccgggattcgaaccccggtaccttcacttgtgtgtgtgagttt 6041873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 168
Target Start/End: Complemental strand, 9902624 - 9902583
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||||||||||||||||||||||||  |||||||||||||||    
T  9902624 aagtcctagctcaactggcaaaatgccgaaattgttaggccg 9902583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 254
Target Start/End: Original strand, 21067516 - 21067572
Alignment:
Q  197 tccacttgtgtgtgtaagtttctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
    ||||||||||||||| ||||| |||||||| |||||||||| |||||||| |||||||    
T  21067516 tccacttgtgtgtgtgagtttataataact-ttgtcatttcgtctatctaccaaaaaa 21067572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 254
Target Start/End: Complemental strand, 36854269 - 36854151
Alignment:
Q  139 aactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaataactgttgtcat 234  Q
    |||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| ||||| ||||  || ||| |||    
T  36854269 aactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagtttataatggct-ttgccat 36854171  T
Q  235 ttcctctatctaacaaaaaa 254  Q
    ||| |||||||| |||||||    
T  36854170 ttcgtctatctaccaaaaaa 36854151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 6053174 - 6053118
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    ||||||||||||||||| |||||||  |||||||||||| || ||||| ||||||||    
T  6053174 aagtcctagctcaactgacaaaatgccgaaattgttaggtcggatgtcatgaccggg 6053118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 1612372 - 1612419
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaa-tgttgaaattgttaggccg 168  Q
    |||||||||||| ||||||||| ||||| |||||||||||||||||||    
T  1612372 tccacaagtccttgctcaactgacaaaaatgttgaaattgttaggccg 1612419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 173
Target Start/End: Complemental strand, 7153316 - 7153265
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgt 173  Q
    ||||||||||||||||||||||| |||  || ||||||||||||||| ||||    
T  7153316 tccacaagtcctagctcaactggtaaatagtcgaaattgttaggccggatgt 7153265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 165
Target Start/End: Original strand, 9068803 - 9068846
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttagg 165  Q
    |||| |||||||||||||||||| ||||||| ||||||||||||    
T  9068803 tccataagtcctagctcaactggtaaaatgtcgaaattgttagg 9068846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 12708004 - 12707961
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttagg 165  Q
    |||| |||||||||||||||||||||||||  ||||||||||||    
T  12708004 tccagaagtcctagctcaactggcaaaatgccgaaattgttagg 12707961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 130 - 165
Target Start/End: Original strand, 36185145 - 36185180
Alignment:
Q  130 tcctagctcaactggcaaaatgttgaaattgttagg 165  Q
    ||||||||||||||||||||||| ||||||||||||    
T  36185145 tcctagctcaactggcaaaatgtcgaaattgttagg 36185180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 222
Target Start/End: Original strand, 1650291 - 1650395
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||  ||||||||  ||||||||||||||| ||| | |||||||| | | ||| ||||   |||||||||||||||| |||||    
T  1650291 tccagaagtcctagctcaacctgcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaactccggtacctccacttgtgtgtgtgagttt 1650390  T
Q  218 ctaat 222  Q
     ||||    
T  1650391 ataat 1650395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 174
Target Start/End: Complemental strand, 9362606 - 9362564
Alignment:
Q  132 ctagctcaactggcaaaatgttgaaattgttaggccgaatgtc 174  Q
    ||||||||||||| |||||| | ||||||||||||||||||||    
T  9362606 ctagctcaactggtaaaatgataaaattgttaggccgaatgtc 9362564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 9640662 - 9640612
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatg 172  Q
    |||| ||||| |||||||||||||||||||  || ||||||||||||||||    
T  9640662 tccagaagtcatagctcaactggcaaaatgccgatattgttaggccgaatg 9640612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 165
Target Start/End: Complemental strand, 10070810 - 10070772
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttagg 165  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  10070810 aagtcctagctcaactggtaaaatgctgaaattgttagg 10070772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 10165532 - 10165667
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||| ||||| ||||||||||  ||||||||||| ||| ||| | ||| |||| | | ||||||||   |||||||||||||||| |||||    
T  10165532 tccataagtcctaactcaattggcaaaatgccgaaattgttagaccggatgccatgatcggggttcgaaccccggtacctccacttgtgtgtgtgagttt 10165631  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     |||| ||| |||  ||||| ||||||||| ||||||    
T  10165632 ataatgact-ttgctatttcgtctatctaaaaaaaaa 10165667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 21728660 - 21728722
Alignment:
Q  122 tccacaagtcctagctcaactggc-aaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||| ||||||||||||||||||| ||||||  ||||||||||||||| ||| | ||||||||    
T  21728660 tccagaagtcctagctcaactggcaaaaatgccgaaattgttaggccggatgccatgaccggg 21728722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 22620779 - 22620733
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||| ||||||||||||||||| |||||||  |||||||||||||||    
T  22620779 tccagaagtcctagctcaactgacaaaatgccgaaattgttaggccg 22620733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 167
Target Start/End: Original strand, 29401977 - 29402023
Alignment:
Q  121 gtccacaagtcctagctcaactggcaaaatgttgaaattgttaggcc 167  Q
    ||||||||||| ||||||||| |  ||||||||||||||||||||||    
T  29401977 gtccacaagtcatagctcaacggataaaatgttgaaattgttaggcc 29402023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 252
Target Start/End: Original strand, 37191250 - 37191377
Alignment:
Q  128 agtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaata 223  Q
    ||||||||||||||||||||||||   |||||||||||| | ||| | ||| |||||| | ||||||||   |||||||| ||||||| ||||| ||||     
T  37191250 agtcctagctcaactggcaaaatgccaaaattgttaggctggatgccatgatcgggattcgaaccccggtacctccacttatgtgtgtgagtttataatg 37191349  T
Q  224 actgttgtcatttcctctatctaacaaaa 252  Q
     || ||| |||||| |||||||| |||||    
T  37191350 gct-ttgccatttcgtctatctaccaaaa 37191377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 14107252 - 14107313
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    ||||||||||||||||||| ||| ||||||  |||| |||||||||| ||| | ||||||||    
T  14107252 tccacaagtcctagctcaattggtaaaatgccgaaactgttaggccggatgccatgaccggg 14107313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 222
Target Start/End: Complemental strand, 16371595 - 16371496
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    ||||||||| |||||||||||||||   |||||||||||| | ||||| ||| |||| | | ||||||||   |||||||||||||||| ||||| ||||    
T  16371595 aagtcctagttcaactggcaaaatgccaaaattgttaggctggatgtcatgatcggggttcgaaccccggtacctccacttgtgtgtgtgagtttataat 16371496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 254
Target Start/End: Complemental strand, 36246116 - 36245987
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    |||||||| ||||||||  ||||||  || |||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| ||||| ||||    
T  36246116 aagtcctaactcaactgaaaaaatgc-gacattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagtttataat 36246018  T
Q  223 aactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||| ||| |||||| |||||||| |||||||    
T  36246017 gact-ttgacatttcgtctatctaccaaaaaa 36245987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 168
Target Start/End: Complemental strand, 43150281 - 43150240
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||||||| ||||||||||||||||  |||||||||||||||    
T  43150281 aagtcctaactcaactggcaaaatggcgaaattgttaggccg 43150240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 254
Target Start/End: Original strand, 5276344 - 5276481
Alignment:
Q  120 agtccacaagtcctagctcaactggcaaaatgtt-gaaattgttaggccgaatgtcgtgaccgggatacaaccccggctcc---acttgtgtgtgtaagt 215  Q
    |||||| |||||  |||||||||||||||| |   ||||||| || |||| ||| | |||||||| |  ||||||||||||   |||||||||||| |||    
T  5276344 agtccataagtctcagctcaactggcaaaaaggccgaaattgctaagccggatgccatgaccggggtcgaaccccggctcctccacttgtgtgtgtgagt 5276443  T
Q  216 ttctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
    ||||||| ||| ||| |||||| || ||||| |||||||    
T  5276444 ttctaatgact-ttgccatttcgtccatctaccaaaaaa 5276481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 168
Target Start/End: Complemental strand, 12638598 - 12638550
Alignment:
Q  120 agtccacaagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||||| |||||||||||||||| | ||||| | |||||||||||||||    
T  12638598 agtccaaaagtcctagctcaactagtaaaatatcgaaattgttaggccg 12638550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 165
Target Start/End: Original strand, 29069631 - 29069671
Alignment:
Q  125 acaagtcctagctcaactggcaaaatgttgaaattgttagg 165  Q
    ||||||||||||||||||||||||||   ||||||||||||    
T  29069631 acaagtcctagctcaactggcaaaataccgaaattgttagg 29069671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 33028235 - 33028291
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    ||||||||| ||||||| |||||||   |||||||||||||| ||||| ||||||||    
T  33028235 aagtcctagttcaactgacaaaatgccaaaattgttaggccggatgtcatgaccggg 33028291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 38682933 - 38682989
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||||||||||||||||||||||||   |||||||||||| | ||| | ||||||||    
T  38682933 aagtcctagctcaactggcaaaatgccaaaattgttaggctggatgccatgaccggg 38682989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 174
Target Start/End: Complemental strand, 42337963 - 42337919
Alignment:
Q  130 tcctagctcaactggcaaaatgttgaaattgttaggccgaatgtc 174  Q
    ||||||||||||||||||||||  |||||||||||| || |||||    
T  42337963 tcctagctcaactggcaaaatgccgaaattgttaggtcggatgtc 42337919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 42653550 - 42653602
Alignment:
Q  131 cctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||| |||||||| |||||||| ||||||||||| ||| ||||| ||||||||    
T  42653550 cctaactcaactgacaaaatgtcgaaattgttagaccggatgtcatgaccggg 42653602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 17534651 - 17534515
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaag-tt 216  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||||| |||||||| | | ||||||||   |||||||||||||||| || ||    
T  17534651 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgaccggggttcgaaccccggtgcctccacttgtgtgtgtgagttt 17534552  T
Q  217 tctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
    | ||||  || |||||||||| ||||||||| ||||||    
T  17534551 tataatggct-ttgtcatttcgtctatctaaaaaaaaa 17534515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 8448270 - 8448135
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| |||||    
T  8448270 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 8448171  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  8448170 ataatggct-ttgccatttcgtctatctaccaaaaaa 8448135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 8457074 - 8456939
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| |||||    
T  8457074 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 8456975  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  8456974 ataatggct-ttgccatttcgtctatctaccaaaaaa 8456939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 8939626 - 8939761
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  |||||||||||| || ||||| |||||||| | | ||||||||   |||||||||||||||| |||||    
T  8939626 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggtcggatgtcatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 8939725  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| ||||||||| ||||||    
T  8939726 ataatggct-ttgccatttcgtctatctaaaaaaaaa 8939761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 2314727 - 2314590
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccact--tgtgtgtgtaagt 215  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||||| |||||||| | | ||||||||   |||||||  ||||||||| |||    
T  2314727 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgaccggggttcgaaccccggtacctccacttgtgtgtgtgtgagt 2314628  T
Q  216 ttctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
    || |||| ||| ||| |||||| |||||||| |||||||    
T  2314627 ttataatgact-ttgccatttcgtctatctaccaaaaaa 2314590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 10181045 - 10181180
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  |||||||||||| || ||||||||| |||| | | ||||| ||   |||||||||||||||| |||||    
T  10181045 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggtcggatgtcgtgatcggggttcgaaccctggtacctccacttgtgtgtgtgagttt 10181144  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  10181145 ataatggct-ttgccatttcgtctatctaccaaaaaa 10181180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 222
Target Start/End: Original strand, 1241600 - 1241699
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccg---gctccacttgtgtgtgtaagtttctaat 222  Q
    |||||||||||||||||||||||||  ||||||||||||||| ||||| |||||||| | | |||||||    |||||||||||||||| ||||| ||||    
T  1241600 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgaccggggttcgaaccccgctacctccacttgtgtgtgtgagtttataat 1241699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 254
Target Start/End: Complemental strand, 18861890 - 18861760
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    |||||||||||||||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||| ||   |||||||||||||||| ||||| ||||    
T  18861890 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccctggtacctccacttgtgtgtgtgagtttataat 18861791  T
Q  223 aactgttgtcatttcctctatctaacaaaaaa 254  Q
      || ||| |||||| |||||||| |||||||    
T  18861790 ggct-ttgccatttcgtctatctaccaaaaaa 18861760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 246
Target Start/End: Complemental strand, 24571740 - 24571618
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    |||||||||||||||||  ||||||| ||||||||||||||  ||||| ||||| || | | |||||||    |||||||||||||||||||||| ||||    
T  24571740 aagtcctagctcaactgaaaaaatgtcgaaattgttaggccagatgtcatgaccagggttcgaaccccgttccctccacttgtgtgtgtaagtttataat 24571641  T
Q  223 aactgttgtcatttcctctatcta 246  Q
     ||| |||||||||| ||||||||    
T  24571640 gact-ttgtcatttcgtctatcta 24571618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 174
Target Start/End: Original strand, 21513077 - 21513124
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtc 174  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  21513077 aagtcctagctcaactggcaaaatgtcgaaattgttaggccggatgtc 21513124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 8329686 - 8329582
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| ||||||||||||||||||||| |||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| |||||    
T  8329686 tccaaaagtcctagctcaactggcaatatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 8329587  T
Q  218 ctaat 222  Q
     ||||    
T  8329586 ataat 8329582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 31205311 - 31205176
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | ||| |||| | | |||||| |   |||||||||||||||| |||||    
T  31205311 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgatcggggttcgaaccccagtacctccacttgtgtgtgtgagttt 31205212  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  31205211 ataatggct-ttgccatttcgtctatctatcaaaaaa 31205176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 222
Target Start/End: Original strand, 6266637 - 6266736
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgg-gatacaaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    ||||| |||||||||||||||||||| ||||||||||| ||| ||||| ||||||| | |  ||||||||   |||||||||||||||| ||||| ||||    
T  6266637 aagtcttagctcaactggcaaaatgtcgaaattgttagaccggatgtcatgaccggagttcgaaccccggtacctccacttgtgtgtgtgagtttataat 6266736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 254
Target Start/End: Complemental strand, 32107958 - 32107828
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    |||||||||||||||||||||||||  ||||||||||||| | ||||| ||| |||| | | ||||||||    ||||||||||||||| ||||| ||||    
T  32107958 aagtcctagctcaactggcaaaatgccgaaattgttaggctggatgtcatgatcggggttcgaaccccggtacttccacttgtgtgtgtgagtttataat 32107859  T
Q  223 aactgttgtcatttcctctatctaacaaaaaa 254  Q
      || ||| |||||| |||||||| |||||||    
T  32107858 ggct-ttgccatttcgtctatctaccaaaaaa 32107828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 178
Target Start/End: Complemental strand, 8116874 - 8116818
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtga 178  Q
    |||||||||||||||| |||||||||||| | ||||||||||||||| ||| |||||    
T  8116874 tccacaagtcctagcttaactggcaaaatatcgaaattgttaggccggatgccgtga 8116818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 10330804 - 10330940
Alignment:
Q  122 tccacaagtcctagctcaactggc-aaaatgttgaaattgttaggccgaatgtcgtgacc-gggatacaaccccgg---ctccacttgtgtgtgtaagtt 216  Q
    |||||||||||||||||||||||| ||||||   |||||||||||||  ||| | ||||| |||||  ||||||||   |||||||||||||||| ||||    
T  10330804 tccacaagtcctagctcaactggcaaaaatgccaaaattgttaggccagatgccatgaccggggatcgaaccccggtacctccacttgtgtgtgtgagtt 10330903  T
Q  217 tctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
    | ||||  || ||| |||||| |||||||| |||||||    
T  10330904 tataatggct-ttgccatttcgtctatctaccaaaaaa 10330940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 4996872 - 4996918
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||| ||||||||||||||||| ||||||| ||||||||||||||||    
T  4996872 tccagaagtcctagctcaactgacaaaatgctgaaattgttaggccg 4996918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 7098806 - 7098852
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||| |||||||||||||||||| ||||||| |||||||||||||||    
T  7098806 tccagaagtcctagctcaactggtaaaatgtcgaaattgttaggccg 7098852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 222
Target Start/End: Original strand, 15953234 - 15953338
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||| ||||||  ||||||||||| ||||||||  |||||||| | | ||||||||   |||||||||| ||||| |||||    
T  15953234 tccagaagtcctagctcaactggtaaaatgccgaaattgttagaccgaatgtaatgaccggggttcgaaccccggtacctccacttgtatgtgtgagttt 15953333  T
Q  218 ctaat 222  Q
     ||||    
T  15953334 ataat 15953338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 222
Target Start/End: Original strand, 31057832 - 31057936
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| ||||| ||||||||||||| ||||| ||| ||||||| |||| ||||| |||||||| | | ||||||||   |||||||||||||||| |||||    
T  31057832 tccagaagtcatagctcaactggcgaaatgctgacattgttaagccggatgtcatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 31057931  T
Q  218 ctaat 222  Q
     ||||    
T  31057932 ataat 31057936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 4083587 - 4083648
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||| |||||||||||||||||||||||||  |||||||||||| || ||| | ||||||||    
T  4083587 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggtcggatgccatgaccggg 4083648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 10263199 - 10263138
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||| |||||||||||||||||||||| ||  ||||||||||||||| ||| | ||||||||    
T  10263199 tccagaagtcctagctcaactggcaaagtgccgaaattgttaggccggatgccatgaccggg 10263138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 254
Target Start/End: Complemental strand, 12795142 - 12795012
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    |||||||||||||||| | ||||||  ||||||||||||||| ||||| |||||||| | | |||| |||   |||||||| ||||||| ||||| ||||    
T  12795142 aagtcctagctcaactagtaaaatgccgaaattgttaggccggatgtcatgaccggggttcgaaccgcggtacctccacttatgtgtgtgagtttataat 12795043  T
Q  223 aactgttgtcatttcctctatctaacaaaaaa 254  Q
      || ||| |||||| |||||||| |||||||    
T  12795042 ggct-ttgccatttcgtctatctaccaaaaaa 12795012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 254
Target Start/End: Original strand, 9727497 - 9727630
Alignment:
Q  125 acaagtcctagctcaactggcaaaa-tgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttct 219  Q
    ||||||||||| ||||||| ||||| ||| ||||||||||||||| ||  | ||| |||| | | |||||| |   |||||||||||||||| ||||| |    
T  9727497 acaagtcctagttcaactgacaaaaatgtcgaaattgttaggccggataccatgatcggggttcgaacccctgtacctccacttgtgtgtgtgagtttat 9727596  T
Q  220 aataactgttgtcatttcctctatctaacaaaaaa 254  Q
    ||| ||| |||||||||| ||||||||| ||||||    
T  9727597 aatgact-ttgtcatttcgtctatctaaaaaaaaa 9727630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 735445 - 735578
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||| ||||||||||||||||||||  ||||||||||||||| ||| | ||| |||| | | ||||||||   |||||||||||||||  |||||    
T  735445 tccagaagttctagctcaactggcaaaatgccgaaattgttaggccggatgccatgatcggggttcgaaccccggtacctccacttgtgtgtg--agttt 735542  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  735543 ataatggct-ttgccatttcgtctatctaccaaaaaa 735578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 222
Target Start/End: Original strand, 2959008 - 2959097
Alignment:
Q  137 tcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaat 222  Q
    |||||||| ||||||| ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| ||||| ||||    
T  2959008 tcaactggtaaaatgtcgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagtttataat 2959097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 185
Target Start/End: Complemental strand, 13540289 - 13540226
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggat 185  Q
    |||| |||||||||||||| ||||||||||  ||||||||||||||| |||   ||||||||||    
T  13540289 tccagaagtcctagctcaaatggcaaaatgccgaaattgttaggccggatgcaatgaccgggat 13540226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 130 - 185
Target Start/End: Original strand, 29479437 - 29479492
Alignment:
Q  130 tcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggat 185  Q
    ||||| ||||||||||||||||| ||||||||||||| | ||||| | ||||||||    
T  29479437 tcctaactcaactggcaaaatgtcgaaattgttaggctggatgtcataaccgggat 29479492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 4480474 - 4480520
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||| |||||||| ||||||||||||||||  |||||||||||||||    
T  4480474 tccagaagtcctaactcaactggcaaaatgccgaaattgttaggccg 4480520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 7098963 - 7099009
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    ||||||| ||||||||||||||| ||||||  |||||||||||||||    
T  7098963 tccacaactcctagctcaactggaaaaatgccgaaattgttaggccg 7099009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 16496781 - 16496719
Alignment:
Q  122 tccacaagtcctagctcaactggc-aaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||| ||||||||||||||||||| ||||||  ||||||||||||||| ||| | ||||||||    
T  16496781 tccagaagtcctagctcaactggcaaaaatgccgaaattgttaggccggatgccatgaccggg 16496719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 28594199 - 28594153
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||| |||||||| |||||||||||||| || |||||||||||||||    
T  28594199 tccagaagtcctaactcaactggcaaaaggtcgaaattgttaggccg 28594153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 217
Target Start/End: Complemental strand, 2301499 - 2301408
Alignment:
Q  130 tcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    ||||||||||||||||||||||   ||||||||||| || ||||| | |||||| | | ||||||||   |||||||||||||||| |||||    
T  2301499 tcctagctcaactggcaaaatgccaaaattgttaggtcggatgtcataaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 2301408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 2746453 - 2746506
Alignment:
Q  126 caagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgac 179  Q
    ||||||||| |||||| | |||||||| ||||||||||||||| ||||| ||||    
T  2746453 caagtcctatctcaaccgacaaaatgtcgaaattgttaggccggatgtcatgac 2746506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 4891008 - 4891069
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||| ||||| |||||||||||| ||||||  ||||||||||||||  ||||| ||||||||    
T  4891008 tccagaagtcttagctcaactggaaaaatgccgaaattgttaggccagatgtcatgaccggg 4891069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 165
Target Start/End: Complemental strand, 7974838 - 7974793
Alignment:
Q  120 agtccacaagtcctagctcaactggcaaaatgttgaaattgttagg 165  Q
    ||||||||||||||| |||||||| |||||||  ||||||||||||    
T  7974838 agtccacaagtcctacctcaactgacaaaatgccgaaattgttagg 7974793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 8487676 - 8487631
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatg 172  Q
    ||||| |||||||||||| ||||||  |||||||||||||||||||    
T  8487676 aagtcttagctcaactggtaaaatgccgaaattgttaggccgaatg 8487631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 174
Target Start/End: Original strand, 17546039 - 17546088
Alignment:
Q  125 acaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtc 174  Q
    |||||||||||||||| || |||||||| |||||||||||| || |||||    
T  17546039 acaagtcctagctcaattgacaaaatgtcgaaattgttaggtcggatgtc 17546088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 163
Target Start/End: Complemental strand, 24647183 - 24647142
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgtta 163  Q
    ||||||| ||||||||||||||  ||||||||||||||||||    
T  24647183 tccacaaatcctagctcaactgataaaatgttgaaattgtta 24647142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 32643856 - 32643795
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||| |||||||| ||||||||| ||||||  ||||||||||||||| ||| | ||||||||    
T  32643856 tccagaagtcctaactcaactggtaaaatgccgaaattgttaggccggatgccatgaccggg 32643795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 181
Target Start/End: Complemental strand, 2018891 - 2018831
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaa-tgttgaaattgttaggccgaatgtcgtgaccg 181  Q
    |||| |||||||||||||||||| |||| ||| |||||||||||| | |||||| ||||||    
T  2018891 tccagaagtcctagctcaactggtaaaaatgtcgaaattgttaggtcaaatgtcatgaccg 2018831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 13507438 - 13507394
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggc 166  Q
    |||| |||||||||||||||||| ||||||  |||||||||||||    
T  13507438 tccagaagtcctagctcaactgggaaaatgccgaaattgttaggc 13507394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 16244416 - 16244472
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    ||||||||| |||||||||||||||  ||||||||||||| | ||| | ||||||||    
T  16244416 aagtcctagatcaactggcaaaatgccgaaattgttaggctggatgccatgaccggg 16244472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0402 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 1369 - 1234
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| |||||    
T  1369 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 1270  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  1269 ataatggct-ttgccatttcgtctatctaccaaaaaa 1234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0778 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0778
Description:

Target: scaffold0778; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 217
Target Start/End: Original strand, 823 - 917
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| |||||    
T  823 aagtcctagctcaactggcaaaatgtcgaaattgttaggccggatgccatgaccggggttcgaaccccggtgcctccacttgtgtgtgtgagttt 917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 345 - 480
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| ||||||||||||||||||||| |||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| |||||    
T  345 tccaaaagtcctagctcaactggcaatatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 444  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||||| |||||    
T  445 ataatggct-ttgccatttcgtctatctaacgaaaaa 480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 1186 - 1051
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||| ||   |||||||||||||||| |||||    
T  1186 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccctggtacctccacttgtgtgtgtgagttt 1087  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  1086 ataatggct-ttgccatttcgtctatctaccaaaaaa 1051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 122 - 217
Target Start/End: Original strand, 9367 - 9466
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| |||||    
T  9367 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtgcctccacttgtgtgtgtgagttt 9466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0457 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 6784 - 6840
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||||||||||||||||||||||||  ||||||||||||||| ||||| ||||||||    
T  6784 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgaccggg 6840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 222
Target Start/End: Original strand, 90569 - 90673
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||  ||||| ||| |||| | | ||||||||   |||||||||||||||| |||||    
T  90569 tccagaagtcctagctcaactggcaaaatgccgaaattgttaggcctgatgtcatgatcggggttcgaaccccggtacctccacttgtgtgtgtgagttt 90668  T
Q  218 ctaat 222  Q
     ||||    
T  90669 ataat 90673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 39441 - 39337
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||| ||||||  ||||||||||||||| ||| | |||||||| | | ||||||||   |||||||||||||||| |||||    
T  39441 tccagaagtcctagctcaactggtaaaatgccgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgagttt 39342  T
Q  218 ctaat 222  Q
     ||||    
T  39341 ataat 39337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 4143 - 4044
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| |||||||||||||||||||||||||  |||||||||| |||| ||| | |||| ||| | | ||||||||   ||||||||||||||||||||||    
T  4143 tccagaagtcctagctcaactggcaaaatgccgaaattgttaagccggatgccatgactggggttcgaaccccggtgcctccacttgtgtgtgtaagttt 4044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 181
Target Start/End: Complemental strand, 8987 - 8928
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccg 181  Q
    |||| ||||| |||||||||||||||||||  ||||||||||||||| ||||| ||||||    
T  8987 tccagaagtcatagctcaactggcaaaatgccgaaattgttaggccggatgtcatgaccg 8928  T

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Target: scaffold0014 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 195740 - 195875
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaa-tgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtt 216  Q
    |||| ||||||||| |||||| |||||| ||| ||||||||||||||| || || |||| ||| | | ||||||||   |||||||||||||||| ||||    
T  195740 tccagaagtcctagttcaactagcaaaaatgtcgaaattgttaggccggatttcatgactggggttcgaaccccggttcctccacttgtgtgtgtgagtt 195839  T
Q  217 tctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
    | |||| ||| |||||||||| |||||| |||||||||    
T  195840 tataatgact-ttgtcatttcgtctatc-aacaaaaaa 195875  T

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Target: scaffold0057 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 253
Target Start/End: Original strand, 64291 - 64417
Alignment:
Q  130 tcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagtttctaataac 225  Q
    ||||||||||||||  |||||  |||||||||||||||| ||| | |||||||  | | |||||| |   |||||||||||||||| ||||| |||| ||    
T  64291 tcctagctcaactgataaaattctgaaattgttaggccggatgccatgaccggagttcgaaccccagtacctccacttgtgtgtgtgagtttataatgac 64390  T
Q  226 tgttgtcatttcctctatctaacaaaaa 253  Q
    | |||||||||| ||||||||| |||||    
T  64391 t-ttgtcatttcgtctatctaaaaaaaa 64417  T

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Target: scaffold0515 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 2478 - 2613
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| ||||| || |||||||| |||||||| ||||||||||||||| |||   |||||||| | | ||||||||   |||||||| ||||||| |||||    
T  2478 tccagaagtcataactcaactgacaaaatgtcgaaattgttaggccggatgctatgaccggggttcgaaccccggtacctccacttatgtgtgtgagttt 2577  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  2578 ataatggct-ttgccatttcgtctatctatcaaaaaa 2613  T

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Target: scaffold0306 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 2478 - 2613
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccgggatac-aaccccgg---ctccacttgtgtgtgtaagttt 217  Q
    |||| ||||| || |||||||| |||||||| ||||||||||||||| |||   |||||||| | | ||||||||   |||||||| ||||||| |||||    
T  2478 tccagaagtcataactcaactgacaaaatgtcgaaattgttaggccggatgctatgaccggggttcgaaccccggtacctccacttatgtgtgtgagttt 2577  T
Q  218 ctaataactgttgtcatttcctctatctaacaaaaaa 254  Q
     ||||  || ||| |||||| |||||||| |||||||    
T  2578 ataatggct-ttgccatttcgtctatctatcaaaaaa 2613  T

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Target: scaffold0242 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 15063 - 15117
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccg 181  Q
    ||||| |||||||||||  ||||||  ||||||||||||||||||||| ||||||    
T  15063 aagtcttagctcaactgataaaatgccgaaattgttaggccgaatgtcatgaccg 15117  T

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Target: scaffold0242; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 23898 - 23952
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccg 181  Q
    ||||| |||||||||||  ||||||  ||||||||||||||||||||| ||||||    
T  23898 aagtcttagctcaactgataaaatgccgaaattgttaggccgaatgtcatgaccg 23952  T

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Target: scaffold0163 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 27045 - 26999
Alignment:
Q  122 tccacaagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    |||| |||| ||||||||||||||||||||  |||||||||||||||    
T  27045 tccataagttctagctcaactggcaaaatgcagaaattgttaggccg 26999  T

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Target: scaffold0027 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 168
Target Start/End: Complemental strand, 19437 - 19395
Alignment:
Q  127 aagtcctagctcaactggcaaaa-tgttgaaattgttaggccg 168  Q
    ||||||||| ||||||||||||| |||||||||||||||||||    
T  19437 aagtcctagttcaactggcaaaaatgttgaaattgttaggccg 19395  T

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Target: scaffold0882 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0882
Description:

Target: scaffold0882; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 168
Target Start/End: Complemental strand, 3820 - 3779
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccg 168  Q
    ||||| |||||||||||||||||||  |||||||||||||||    
T  3820 aagtcttagctcaactggcaaaatgccgaaattgttaggccg 3779  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 411653 - 411709
Alignment:
Q  127 aagtcctagctcaactggcaaaatgttgaaattgttaggccgaatgtcgtgaccggg 183  Q
    |||| ||| |||||||||||||||||  ||||||||||| || ||||| ||||||||    
T  411653 aagttctaactcaactggcaaaatgtcaaaattgttaggtcggatgtcatgaccggg 411709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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