View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend Query Query hiting target
Query hiting target's complemental strand Query's complemental strand hiting target
Query's complemental strand hiting target's complemental strand
Alignment Overview
Query: 454-NF4353-Insertion-10 (Length: 161)
Name: 454-NF4353-Insertion-10
Description: 454-NF4353
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[» ] 454-NF4353-Insertion-10
[» ] chr4 (2 HSPs)
Alignment Details
Target: chr4 (Bit Score: 119; Significance: 4e-61; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 119; E-Value: 4e-61
Query Start/End: Original strand, 35 - 161
Target Start/End: Original strand, 42356481 - 42356607
Alignment:
Q
35
acacaagtttctaacctttggtgggagtttaagcttccaaatgatactccaatgacctgttactctatgttgcgtcataacactatcattgtcgatgatt
134
Q
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
T
42356481
acacaagtttctaacctttggtgggagtttaagcttccaaatgatactccaatgacctgttactctatgttgcgtcacaacactatcattgtcgatgatt
42356580
T
Q
135
tcccgataagcattgcagtatgtgtaa
161
Q
||||||||||||||||| |||||||||
T
42356581
tcccgataagcattgcaatatgtgtaa
42356607
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 79; E-Value: 3e-37
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 42357519 - 42357661
Alignment:
Q
6
catcatacccgacacataccacacagataacacaagtttctaacctttggtgggagtttaagcttccaaatgatactccaatgacctgttactctatgtt
105
Q
|||||| | |||||||||||||| | ||||||||||||| || |||||||||| | |||||||||||| ||||||||||||||| || ||||||| ||||
T
42357519
catcatgctcgacacataccacataaataacacaagtttttagcctttggtggcattttaagcttccagatgatactccaatgatctattactctttgtt
42357618
T
Q
106
gcgtcataacactatcattgtcgatgatttcccgataagcatt
148
Q
|||||| |||||||||||||| ||||||||| | |||||||||
T
42357619
gcgtcacaacactatcattgttgatgatttctcaataagcatt
42357661
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6 (Bit Score: 31; Significance: 0.00000001; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 124
Target Start/End: Original strand, 13998096 - 13998174
Alignment:
Q
46
taacctttggtgggagtttaagcttccaaatgatactccaatgacctgttactctatgttgcgtcataacactatcatt
124
Q
|||||||||||||||||||||| |||||||| | ||||||| || | ||||||||||||| ||| ||| |||||||
T
13998096
taacctttggtgggagtttaagattccaaatagaattccaatgcccaggtactctatgttgcagcatgacaatatcatt
13998174
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5 (Bit Score: 31; Significance: 0.00000001; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 124
Target Start/End: Original strand, 33305864 - 33305942
Alignment:
Q
46
taacctttggtgggagtttaagcttccaaatgatactccaatgacctgttactctatgttgcgtcataacactatcatt
124
Q
|||||||||||||||||||||| |||||||| | ||||||| || | ||||||||||||| ||| ||| |||||||
T
33305864
taacctttggtgggagtttaagattccaaatagaattccaatgcccaggtactctatgttgcagcatgacaatatcatt
33305942
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3 (Bit Score: 31; Significance: 0.00000001; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 124
Target Start/End: Complemental strand, 31636830 - 31636752
Alignment:
Q
46
taacctttggtgggagtttaagcttccaaatgatactccaatgacctgttactctatgttgcgtcataacactatcatt
124
Q
|||||||||||||||||||||| |||||||| | ||||||| || | ||||||||||||| ||| ||| |||||||
T
31636830
taacctttggtgggagtttaagattccaaatagaattccaatgcccaggtactctatgttgcagcatgacaatatcatt
31636752
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
© Oklahoma State University
SLOT GACOR - FITUR MAXWIN GAMPANG SCATTER HITAM DI LINK SLOT MAXWIN HARI INI
SLOT GACOR - FITUR MAXWIN GAMPANG SCATTER HITAM DI LINK SLOT MAXWIN HARI INI
Main Slot gacor sambil tembak langit pasti di link slot maxwin hari ini , daftar yuk id mu sekarang !!
Auroratoto & Situs Gacor Terpercaya
Maxi188, Hanomantoto, Togeljackpot, Wukong778
Auroratoto2 kami jamin akan bayar kemenangan Anda! Bergabung sekarang di Auroratoto, Maxi188, Hanomantoto, Togeljackpot, dan Wukong778 untuk pengalaman slot dan togel gacor dengan jackpot besar!
>
Rp.10.000 100% Tanpa Potongan
Visitors: 9090
