View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: F9049J-LTR4-TNT-insertion-13 (Length: 562)

Name: F9049J-LTR4-TNT-insertion-13
Description: F9049J-LTR4
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] F9049J-LTR4-TNT-insertion-13
F9049J-LTR4-TNT-insertion-13
[»] chr5 (37 HSPs)
chr5 (8-375)||(32193935-32194302)
chr5 (390-483)||(15838774-15838861)
chr5 (83-235)||(28586762-28586911)
chr5 (386-424)||(14310897-14310935)
chr5 (65-155)||(20982209-20982298)
chr5 (386-432)||(30668331-30668377)
chr5 (246-299)||(36796626-36796679)
chr5 (116-235)||(14295463-14295580)
chr5 (188-307)||(38028576-38028695)
chr5 (177-235)||(41957447-41957505)
chr5 (178-235)||(17369435-17369492)
chr5 (177-234)||(33533536-33533593)
chr5 (70-155)||(37063148-37063232)
chr5 (86-138)||(19460050-19460101)
chr5 (177-221)||(38104867-38104911)
chr5 (65-136)||(26516205-26516275)
chr5 (181-220)||(29659371-29659410)
chr5 (229-299)||(499650-499720)
chr5 (181-235)||(4273373-4273427)
chr5 (229-299)||(5377116-5377186)
chr5 (177-235)||(18543193-18543250)
chr5 (75-141)||(35095871-35095936)
chr5 (191-233)||(35963271-35963313)
chr5 (177-235)||(40205070-40205128)
chr5 (65-110)||(11790890-11790935)
chr5 (70-155)||(35135736-35135820)
chr5 (178-234)||(6109500-6109556)
chr5 (177-221)||(7319422-7319466)
chr5 (179-235)||(8177528-8177584)
chr5 (177-237)||(10272425-10272485)
chr5 (244-300)||(10791090-10791146)
chr5 (177-237)||(12242704-12242764)
chr5 (116-224)||(12975304-12975409)
chr5 (249-297)||(14706205-14706253)
chr5 (244-292)||(16016352-16016400)
chr5 (189-221)||(20028500-20028532)
chr5 (244-300)||(31208568-31208624)
[»] chr7 (48 HSPs)
chr7 (372-554)||(6942980-6943162)
chr7 (372-521)||(5597696-5597845)
chr7 (386-478)||(48897192-48897278)
chr7 (386-483)||(35358679-35358770)
chr7 (386-441)||(15993137-15993192)
chr7 (386-438)||(37746866-37746918)
chr7 (386-431)||(11846469-11846514)
chr7 (388-440)||(28394369-28394421)
chr7 (181-297)||(35267382-35267498)
chr7 (177-296)||(529391-529510)
chr7 (65-137)||(24975811-24975882)
chr7 (412-483)||(36709769-36709834)
chr7 (82-161)||(30751441-30751519)
chr7 (390-483)||(38092582-38092670)
chr7 (386-428)||(32041484-32041526)
chr7 (181-234)||(39566204-39566257)
chr7 (188-237)||(46082063-46082112)
chr7 (229-301)||(4970709-4970780)
chr7 (115-155)||(17989097-17989137)
chr7 (83-155)||(30496629-30496700)
chr7 (177-237)||(39360039-39360099)
chr7 (75-155)||(45593793-45593872)
chr7 (177-237)||(47134751-47134811)
chr7 (82-141)||(753292-753350)
chr7 (244-299)||(33894723-33894778)
chr7 (118-156)||(816019-816057)
chr7 (177-231)||(24363601-24363655)
chr7 (177-234)||(33871267-33871322)
chr7 (191-237)||(39568318-39568364)
chr7 (177-235)||(42281510-42281568)
chr7 (115-153)||(44239056-44239094)
chr7 (230-300)||(47007055-47007125)
chr7 (177-222)||(7244696-7244741)
chr7 (244-297)||(8427109-8427162)
chr7 (260-297)||(9210933-9210970)
chr7 (177-234)||(9423591-9423648)
chr7 (188-237)||(12234883-12234932)
chr7 (182-235)||(22551401-22551454)
chr7 (200-233)||(33894666-33894699)
chr7 (200-237)||(39539775-39539812)
chr7 (192-237)||(46281134-46281179)
chr7 (75-139)||(5373142-5373205)
chr7 (200-268)||(6552255-6552323)
chr7 (202-234)||(8799889-8799921)
chr7 (244-300)||(29363604-29363660)
chr7 (229-301)||(30748951-30749023)
chr7 (260-300)||(37064386-37064426)
chr7 (83-139)||(46213728-46213783)
[»] chr4 (46 HSPs)
chr4 (372-523)||(18303955-18304106)
chr4 (372-523)||(18031213-18031367)
chr4 (399-522)||(33166522-33166645)
chr4 (386-452)||(9135701-9135767)
chr4 (386-441)||(21076356-21076411)
chr4 (386-441)||(46080083-46080138)
chr4 (386-483)||(4432151-4432242)
chr4 (386-483)||(44199287-44199378)
chr4 (386-449)||(938207-938269)
chr4 (386-441)||(2712537-2712592)
chr4 (386-441)||(42250955-42251010)
chr4 (386-439)||(33268720-33268773)
chr4 (386-449)||(34857624-34857687)
chr4 (177-224)||(53673665-53673712)
chr4 (177-235)||(23819105-23819163)
chr4 (185-231)||(33534169-33534215)
chr4 (203-296)||(46859972-46860066)
chr4 (81-155)||(54325111-54325184)
chr4 (177-222)||(46110219-46110264)
chr4 (229-297)||(4071959-4072026)
chr4 (65-137)||(4471078-4471149)
chr4 (83-155)||(18630605-18630676)
chr4 (81-233)||(30207569-30207717)
chr4 (80-136)||(32066502-32066557)
chr4 (188-236)||(47970323-47970371)
chr4 (177-257)||(52735138-52735217)
chr4 (177-224)||(5131257-5131304)
chr4 (182-237)||(46401286-46401340)
chr4 (270-301)||(54581070-54581101)
chr4 (230-292)||(7063574-7063636)
chr4 (200-293)||(35743321-35743414)
chr4 (178-256)||(42121505-42121582)
chr4 (73-155)||(46796933-46797014)
chr4 (82-140)||(51555956-51556013)
chr4 (74-138)||(23503474-23503538)
chr4 (82-155)||(30024624-30024696)
chr4 (70-155)||(44319862-44319945)
chr4 (244-296)||(1017124-1017176)
chr4 (177-237)||(2996589-2996649)
chr4 (82-153)||(4191663-4191734)
chr4 (177-229)||(19429725-19429777)
chr4 (260-300)||(27043748-27043788)
chr4 (200-236)||(27721756-27721792)
chr4 (248-300)||(32071963-32072015)
chr4 (177-241)||(32799730-32799794)
chr4 (177-233)||(46415790-46415846)
[»] chr2 (54 HSPs)
chr2 (372-523)||(37873848-37874002)
chr2 (386-483)||(18859752-18859843)
chr2 (386-452)||(5203478-5203544)
chr2 (386-483)||(18696201-18696292)
chr2 (390-482)||(11829379-11829465)
chr2 (200-300)||(6547941-6548041)
chr2 (201-301)||(43910930-43911029)
chr2 (179-237)||(14299625-14299683)
chr2 (386-483)||(34067514-34067605)
chr2 (81-155)||(37053517-37053590)
chr2 (177-235)||(44458334-44458392)
chr2 (82-166)||(5903225-5903307)
chr2 (177-237)||(34652030-34652090)
chr2 (244-299)||(22878194-22878249)
chr2 (386-433)||(25980396-25980443)
chr2 (82-220)||(35329829-35329965)
chr2 (247-301)||(40759259-40759313)
chr2 (244-301)||(15370240-15370297)
chr2 (177-234)||(16867755-16867812)
chr2 (188-237)||(25796194-25796243)
chr2 (200-237)||(30538167-30538204)
chr2 (177-234)||(33192218-33192275)
chr2 (177-222)||(35379025-35379070)
chr2 (188-237)||(43065444-43065493)
chr2 (177-222)||(44443337-44443382)
chr2 (244-300)||(750830-750886)
chr2 (244-304)||(3973638-3973698)
chr2 (177-293)||(5781685-5781800)
chr2 (249-293)||(26671440-26671484)
chr2 (189-237)||(32821837-32821885)
chr2 (177-237)||(41809239-41809299)
chr2 (177-264)||(1893249-1893335)
chr2 (390-441)||(10746667-10746718)
chr2 (232-299)||(13866962-13867029)
chr2 (188-235)||(28677655-28677702)
chr2 (80-155)||(37766720-37766794)
chr2 (246-297)||(40158816-40158867)
chr2 (243-297)||(10817495-10817549)
chr2 (177-235)||(35557121-35557179)
chr2 (188-237)||(1939326-1939375)
chr2 (188-293)||(5826244-5826348)
chr2 (178-235)||(29316771-29316828)
chr2 (82-151)||(29429835-29429904)
chr2 (244-301)||(37276840-37276897)
chr2 (251-308)||(37419577-37419634)
chr2 (188-237)||(38077067-38077116)
chr2 (177-222)||(38078419-38078464)
chr2 (231-264)||(41039634-41039667)
chr2 (200-237)||(44606104-44606141)
chr2 (70-98)||(6561279-6561307)
chr2 (177-233)||(7103480-7103536)
chr2 (252-300)||(8017538-8017586)
chr2 (80-148)||(33197320-33197387)
chr2 (244-300)||(43529776-43529832)
[»] scaffold0369 (1 HSPs)
scaffold0369 (386-483)||(10157-10253)
[»] scaffold0136 (1 HSPs)
scaffold0136 (386-449)||(36112-36175)
[»] chr1 (61 HSPs)
chr1 (389-483)||(13902797-13902885)
chr1 (386-483)||(4414403-4414494)
chr1 (386-455)||(17865059-17865128)
chr1 (386-441)||(36631470-36631525)
chr1 (386-483)||(50961860-50961951)
chr1 (388-441)||(10374855-10374908)
chr1 (244-301)||(3597198-3597255)
chr1 (177-234)||(16981933-16981990)
chr1 (244-300)||(4622189-4622245)
chr1 (188-235)||(27963366-27963413)
chr1 (390-449)||(31838287-31838346)
chr1 (177-235)||(27140494-27140552)
chr1 (177-235)||(28689448-28689506)
chr1 (75-155)||(870962-871041)
chr1 (177-237)||(43722322-43722382)
chr1 (177-237)||(46252676-46252736)
chr1 (386-441)||(27903721-27903776)
chr1 (177-235)||(10199404-10199462)
chr1 (386-441)||(48642849-48642906)
chr1 (244-301)||(24460318-24460375)
chr1 (81-237)||(30259480-30259634)
chr1 (116-237)||(30371105-30371224)
chr1 (115-155)||(4200185-4200225)
chr1 (180-240)||(8016276-8016336)
chr1 (244-300)||(12564417-12564473)
chr1 (248-300)||(33976278-33976330)
chr1 (116-237)||(38867825-38867946)
chr1 (229-293)||(49691978-49692041)
chr1 (229-297)||(51929383-51929451)
chr1 (244-299)||(6292588-6292643)
chr1 (70-153)||(7274015-7274097)
chr1 (200-235)||(12477283-12477318)
chr1 (244-299)||(21002251-21002306)
chr1 (247-298)||(24417655-24417706)
chr1 (191-234)||(34380475-34380518)
chr1 (386-449)||(40246936-40246999)
chr1 (191-237)||(4868430-4868476)
chr1 (208-258)||(5276340-5276390)
chr1 (177-235)||(7136994-7137052)
chr1 (177-235)||(12564495-12564553)
chr1 (81-115)||(15784764-15784798)
chr1 (177-235)||(24460403-24460461)
chr1 (244-290)||(28075800-28075846)
chr1 (177-235)||(34290252-34290310)
chr1 (188-237)||(4699609-4699658)
chr1 (116-165)||(12519034-12519083)
chr1 (200-237)||(15579521-15579558)
chr1 (244-301)||(23373230-23373287)
chr1 (177-222)||(23902076-23902121)
chr1 (177-234)||(25479597-25479654)
chr1 (177-222)||(28077078-28077123)
chr1 (116-153)||(50319249-50319286)
chr1 (116-156)||(601019-601058)
chr1 (200-236)||(3224462-3224498)
chr1 (260-300)||(3887550-3887590)
chr1 (200-240)||(5082872-5082912)
chr1 (177-229)||(6279415-6279467)
chr1 (188-224)||(6659541-6659577)
chr1 (177-233)||(32515439-32515495)
chr1 (189-237)||(37593678-37593726)
chr1 (178-222)||(38503474-38503518)
[»] chr6 (42 HSPs)
chr6 (386-466)||(996423-996503)
chr6 (386-483)||(17140488-17140583)
chr6 (386-483)||(25385873-25385964)
chr6 (388-483)||(19635221-19635310)
chr6 (386-449)||(28744498-28744561)
chr6 (116-237)||(281842-281961)
chr6 (388-441)||(2404264-2404317)
chr6 (75-153)||(13360652-13360729)
chr6 (115-235)||(2027402-2027520)
chr6 (89-237)||(4006645-4006790)
chr6 (83-155)||(7713950-7714021)
chr6 (189-237)||(9027606-9027654)
chr6 (177-237)||(10616535-10616595)
chr6 (189-240)||(6536975-6537026)
chr6 (81-158)||(24774681-24774758)
chr6 (189-301)||(821453-821566)
chr6 (180-237)||(3528822-3528879)
chr6 (177-234)||(4420659-4420716)
chr6 (191-300)||(27894076-27894185)
chr6 (188-233)||(27909636-27909681)
chr6 (83-155)||(3204616-3204687)
chr6 (179-235)||(7785740-7785796)
chr6 (65-141)||(21919981-21920056)
chr6 (189-237)||(30863274-30863322)
chr6 (229-301)||(32171300-32171372)
chr6 (200-235)||(2034442-2034477)
chr6 (244-299)||(29249489-29249544)
chr6 (247-301)||(3153588-3153642)
chr6 (229-299)||(33089587-33089657)
chr6 (177-235)||(34939760-34939818)
chr6 (180-237)||(2112219-2112276)
chr6 (70-155)||(7351682-7351766)
chr6 (243-299)||(8420115-8420172)
chr6 (188-237)||(9667979-9668028)
chr6 (70-155)||(10452434-10452518)
chr6 (251-296)||(30533894-30533939)
chr6 (262-299)||(31776191-31776228)
chr6 (246-299)||(33284340-33284393)
chr6 (244-300)||(281766-281822)
chr6 (193-237)||(733171-733215)
chr6 (177-237)||(10031748-10031808)
chr6 (181-237)||(24745439-24745495)
[»] chr8 (37 HSPs)
chr8 (386-484)||(35321724-35321816)
chr8 (386-448)||(27408113-27408175)
chr8 (70-233)||(28769337-28769497)
chr8 (390-483)||(43324230-43324317)
chr8 (70-141)||(14482114-14482184)
chr8 (390-449)||(30680803-30680862)
chr8 (82-155)||(7026655-7026727)
chr8 (177-222)||(42215091-42215136)
chr8 (388-435)||(37124836-37124884)
chr8 (70-141)||(39392749-39392819)
chr8 (179-237)||(25869260-25869318)
chr8 (250-298)||(4560604-4560652)
chr8 (189-237)||(14949894-14949942)
chr8 (177-237)||(38421280-38421340)
chr8 (244-299)||(7714338-7714393)
chr8 (200-299)||(14926901-14927000)
chr8 (229-299)||(2487927-2487997)
chr8 (247-297)||(12361293-12361343)
chr8 (191-237)||(13000418-13000464)
chr8 (177-235)||(20672766-20672824)
chr8 (183-237)||(30918135-30918188)
chr8 (177-235)||(37353245-37353303)
chr8 (177-234)||(10062138-10062195)
chr8 (177-234)||(11813102-11813159)
chr8 (188-264)||(12833397-12833476)
chr8 (177-222)||(33714245-33714290)
chr8 (260-301)||(38602439-38602480)
chr8 (38-99)||(41933340-41933400)
chr8 (200-300)||(1664421-1664521)
chr8 (189-237)||(2091791-2091839)
chr8 (201-237)||(2594991-2595027)
chr8 (177-237)||(4055610-4055670)
chr8 (177-221)||(4762525-4762569)
chr8 (189-233)||(6950350-6950394)
chr8 (229-297)||(11376784-11376852)
chr8 (189-237)||(12224893-12224941)
chr8 (179-235)||(42215302-42215358)
[»] scaffold0013 (1 HSPs)
scaffold0013 (386-483)||(100153-100244)
[»] scaffold0087 (1 HSPs)
scaffold0087 (386-441)||(42699-42754)
[»] chr3 (56 HSPs)
chr3 (386-441)||(23495129-23495184)
chr3 (178-237)||(41724228-41724288)
chr3 (386-483)||(26166650-26166741)
chr3 (65-237)||(1816489-1816659)
chr3 (188-288)||(25925769-25925869)
chr3 (188-235)||(54180776-54180823)
chr3 (115-233)||(33965486-33965605)
chr3 (386-483)||(29860065-29860164)
chr3 (180-237)||(43115075-43115132)
chr3 (177-237)||(37273150-37273210)
chr3 (197-240)||(12923316-12923359)
chr3 (386-449)||(24910416-24910479)
chr3 (177-235)||(24785221-24785279)
chr3 (387-441)||(45291964-45292018)
chr3 (260-301)||(16072958-16072999)
chr3 (229-300)||(25182908-25182976)
chr3 (200-237)||(36200135-36200172)
chr3 (80-153)||(44374720-44374792)
chr3 (244-301)||(45541667-45541724)
chr3 (177-234)||(49586933-49586990)
chr3 (177-221)||(23793600-23793644)
chr3 (116-164)||(26990691-26990739)
chr3 (177-233)||(33883748-33883804)
chr3 (177-233)||(34924536-34924592)
chr3 (81-141)||(50016046-50016105)
chr3 (178-229)||(21862177-21862228)
chr3 (244-299)||(21872214-21872269)
chr3 (188-235)||(37825149-37825196)
chr3 (181-232)||(40665449-40665500)
chr3 (80-151)||(41028929-41028999)
chr3 (177-235)||(1217796-1217854)
chr3 (187-237)||(3015837-3015887)
chr3 (177-299)||(13709755-13709877)
chr3 (177-235)||(39602206-39602264)
chr3 (75-153)||(48528495-48528572)
chr3 (229-299)||(50211816-50211886)
chr3 (181-235)||(51206494-51206548)
chr3 (182-235)||(2196424-2196477)
chr3 (248-297)||(20173811-20173860)
chr3 (230-299)||(20210847-20210916)
chr3 (244-293)||(22667499-22667548)
chr3 (244-293)||(22724138-22724187)
chr3 (188-237)||(31010429-31010478)
chr3 (244-300)||(36507010-36507067)
chr3 (270-299)||(41155291-41155320)
chr3 (189-234)||(45432936-45432981)
chr3 (193-237)||(1810009-1810053)
chr3 (183-219)||(2318667-2318703)
chr3 (202-234)||(11039336-11039368)
chr3 (189-221)||(27792900-27792932)
chr3 (244-296)||(36200192-36200244)
chr3 (177-237)||(42745054-42745114)
chr3 (244-300)||(48528652-48528708)
chr3 (177-229)||(49546486-49546538)
chr3 (274-306)||(51929867-51929899)
chr3 (188-236)||(53848058-53848106)
[»] scaffold0002 (1 HSPs)
scaffold0002 (372-445)||(201448-201521)
[»] scaffold0862 (1 HSPs)
scaffold0862 (386-483)||(1605-1696)
[»] scaffold0147 (1 HSPs)
scaffold0147 (177-237)||(12698-12758)
[»] scaffold0654 (1 HSPs)
scaffold0654 (81-153)||(6713-6784)
[»] scaffold0159 (1 HSPs)
scaffold0159 (177-293)||(27017-27132)
[»] scaffold0014 (1 HSPs)
scaffold0014 (81-153)||(116632-116703)
[»] scaffold0590 (1 HSPs)
scaffold0590 (83-141)||(1162-1219)
[»] scaffold0275 (1 HSPs)
scaffold0275 (83-141)||(2756-2813)
[»] scaffold0024 (1 HSPs)
scaffold0024 (65-155)||(27483-27572)
[»] scaffold0003 (1 HSPs)
scaffold0003 (177-235)||(306342-306400)
[»] scaffold0311 (1 HSPs)
scaffold0311 (200-237)||(10611-10648)
[»] scaffold0199 (1 HSPs)
scaffold0199 (200-300)||(6862-6962)


Alignment Details
Target: chr5 (Bit Score: 347; Significance: 0; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 8 - 375
Target Start/End: Complemental strand, 32194302 - 32193935
Alignment:
Q  8 acaaaagcactagtagtgtggtataagcgttgtttggataatcagtttaagtaaagggcttgtagcataagagcttatcatataagtgcttatgcataca 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32194302 acaaaagcactagtagtgtggtataagcgttgtttggataatcagtttaagtaaagggcttgtagcataagagcttatcatataagtgcttatgcataca 32194203  T
Q  108 ctacttcttataacaaaatataaaataaagtcaagatgttttcatatataagctataagatgnnnnnnnaagctatctttgagagcttatataaataagc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||    
T  32194202 ctacttcttataacaaaatataaaataaagtcaagatgttttcatatataagctataagatgtttttttaagctatctttgagagcttatataaataagc 32194103  T
Q  208 tgaaaacaacttatggaaatgtcataagttctctataacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaacagggccaaa 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32194102 tgaaaacaacttatggaaatgtcataagttctctataacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaacagggccaaa 32194003  T
Q  308 agtgaatctttagagttataggtttgagaaacagtcgaagcctaatagtaaagtttttattgacaatt 375  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32194002 agtgaatctttagagttataggtttgagaaacagtcgaagcctaatagtaaagtttttattgacaatt 32193935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 390 - 483
Target Start/End: Original strand, 15838774 - 15838861
Alignment:
Q  390 aattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatcaatatccattgtatcctgtttttgatctagatta 483  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||      ||||| |||||||||||| |||| || ||||||||||    
T  15838774 aattaagggcttgttattcaatagtataacatgacttatataccggtgtca------atcaaaatccattgtatcttgttatttatctagatta 15838861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 83 - 235
Target Start/End: Complemental strand, 28586911 - 28586762
Alignment:
Q  83 tatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttcatatataagctataagatgnnnnnnnaagcta 182  Q
    ||||||||| ||| ||||| |||||||| |||| ||||||||| |||||||||||||||  ||||||||  |||||  |||||| ||        |||||    
T  28586911 tatcatatatgtggttatgtatacactatttct-ataacaaaagataaaataaagtcaaactgttttca--tataaattataagctgttttgacgagcta 28586815  T
Q  183 tctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataag 235  Q
    || | ||||||||||  |||||||||||||||| |||| ||| ||||||||||    
T  28586814 tcctagagagcttatcgaaataagctgaaaacagcttacggatatgtcataag 28586762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 386 - 424
Target Start/End: Original strand, 14310897 - 14310935
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgac 424  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14310897 atagaattaagggcttgttattcaacagtataacatgac 14310935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 65 - 155
Target Start/End: Complemental strand, 20982298 - 20982209
Alignment:
Q  65 gcttgtagcataagagcttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttcatata 155  Q
    |||| ||||||||| |||||||||||||||||||||| |||  ||| ||| |||||||||  |||||||||||||||   |||||||||||    
T  20982298 gcttatagcataagtgcttatcatataagtgcttatgtataagctatttc-tataacaaaggataaaataaagtcaacccgttttcatata 20982209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 386 - 432
Target Start/End: Original strand, 30668331 - 30668377
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatatac 432  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||    
T  30668331 atagaattaagggcttcttattcaatagtataacatgacttatatac 30668377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 36796679 - 36796626
Alignment:
Q  246 cagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaaca 299  Q
    |||||||||||||  |||| ||||||| ||||||||||||||||||||||||||    
T  36796679 cagtctcacaagtgtttatgtcattagataagctcaaataagtcaatccaaaca 36796626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 116 - 235
Target Start/End: Original strand, 14295463 - 14295580
Alignment:
Q  116 tataacaaaatataaaataaagtcaagatgttttcatatataagctataagatgnnnnnnnaagctatctttgagagcttatataaataagctgaaaaca 215  Q
    |||||||||| |||||||||||||||  |||||||  |||||||||||||| ||       |||||||| | |||||||| || || |||||||||||||    
T  14295463 tataacaaaagataaaataaagtcaaactgttttc--atataagctataagctgttttcgtaagctatcctggagagcttttagaagtaagctgaaaaca 14295560  T
Q  216 acttatggaaatgtcataag 235  Q
     ||||| || || |||||||    
T  14295561 gcttatcgacatatcataag 14295580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 188 - 307
Target Start/End: Original strand, 38028576 - 38028695
Alignment:
Q  188 gagagcttatataaataagctgaaaacaacttatggaaatgtcataagttctctataacagtctcacaagttcttatatcattagttaagctcaaataag 287  Q
    ||||||||||| | ||||| |||||||| ||| | ||  ||||||||| |||||  || ||||||| ||||| | ||| || ||| ||||||||||||||    
T  38028576 gagagcttatagagataagttgaaaacagcttctagacttgtcataagctctctgaaatagtctcataagttttcataccagtagataagctcaaataag 38028675  T
Q  288 tcaatccaaacagggccaaa 307  Q
    ||  |||||||||| |||||    
T  38028676 tcggtccaaacaggcccaaa 38028695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 41957505 - 41957447
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataag 235  Q
    |||||||| |||||| |||||  ||||||| ||||||||||||||||| ||||||||||    
T  41957505 aagctatccttgagaacttatgaaaataagatgaaaacaacttatggacatgtcataag 41957447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 17369492 - 17369435
Alignment:
Q  178 agctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataag 235  Q
    |||||||||  |||||||||| |||||| ||||||||||||||| || ||||||||||    
T  17369492 agctatcttcaagagcttatagaaataatctgaaaacaacttatagacatgtcataag 17369435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 33533593 - 33533536
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataa 234  Q
    |||||||||| ||||||||||  ||||||| ||||||||||||||| | |||||||||    
T  33533593 aagctatcttggagagcttatggaaataagttgaaaacaacttatgaatatgtcataa 33533536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 70 - 155
Target Start/End: Complemental strand, 37063232 - 37063148
Alignment:
Q  70 tagcataagagcttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttcatata 155  Q
    ||||||||  |||| |||||||| |||||||| ||| |||| |||| ||||||||| |||||||||||||||  | ||||||||||    
T  37063232 tagcataaatgcttgtcatataaatgcttatgtataaactatttct-ataacaaaagataaaataaagtcaaactattttcatata 37063148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 19460050 - 19460101
Alignment:
Q  86 catataagtgcttatgcatacactacttcttataacaaaatataaaataaagt 138  Q
    |||||||||||||||  ||||||||||| ||||||||||| ||||||||||||    
T  19460050 catataagtgcttatctatacactactt-ttataacaaaagataaaataaagt 19460101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 38104911 - 38104867
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttat 221  Q
    |||||||||| ||||||||||  ||||||||||||||||||||||    
T  38104911 aagctatcttagagagcttatggaaataagctgaaaacaacttat 38104867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 136
Target Start/End: Original strand, 26516205 - 26516275
Alignment:
Q  65 gcttgtagcataagagcttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaa 136  Q
    |||| ||||||||| |||||||||||||||||||||| |||  ||| ||| || ||||||| ||||||||||    
T  26516205 gcttatagcataagcgcttatcatataagtgcttatgtataagctatttc-taaaacaaaagataaaataaa 26516275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 29659371 - 29659410
Alignment:
Q  181 tatctttgagagcttatataaataagctgaaaacaactta 220  Q
    |||||| ||||| |||||||||||||||||||||||||||    
T  29659371 tatcttagagagtttatataaataagctgaaaacaactta 29659410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 229 - 299
Target Start/End: Complemental strand, 499720 - 499650
Alignment:
Q  229 tcataagttctctataacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaaca 299  Q
    ||||||||||||   ||||| || ||| || ||||| ||| ||| ||||||||||||||||||||||||||    
T  499720 tcataagttctcccaaacagcctaacaggtgcttatgtcagtaggtaagctcaaataagtcaatccaaaca 499650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 4273427 - 4273373
Alignment:
Q  181 tatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataag 235  Q
    ||||||||||||||||||  |||||| |||||||||||||| || | ||||||||    
T  4273427 tatctttgagagcttatagcaataagttgaaaacaacttatagacaagtcataag 4273373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 229 - 299
Target Start/End: Complemental strand, 5377186 - 5377116
Alignment:
Q  229 tcataagttctctataacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaaca 299  Q
    ||||||||| ||  ||||||||| |||||| ||||| ||| ||| |||||||||||||| |||||| ||||    
T  5377186 tcataagttatcgctaacagtcttacaagtgcttatgtcaatagataagctcaaataagccaatccgaaca 5377116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 18543250 - 18543193
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataag 235  Q
    |||||||| | ||||||||||  ||||||||||||||||||| ||||| ||||||||||    
T  18543250 aagctatcctggagagcttatg-aaataagctgaaaacaactcatggacatgtcataag 18543193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 75 - 141
Target Start/End: Complemental strand, 35095936 - 35095871
Alignment:
Q  75 taagagcttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaa 141  Q
    |||| |||||||||||||||||||||   || |||| |||| ||||||||| |||||||||||||||    
T  35095936 taagcgcttatcatataagtgcttatatttaaactatttct-ataacaaaagataaaataaagtcaa 35095871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 35963271 - 35963313
Alignment:
Q  191 agcttatataaataagctgaaaacaacttatggaaatgtcata 233  Q
    |||||||  ||||||||||||||||||||||||| ||||||||    
T  35963271 agcttatggaaataagctgaaaacaacttatggacatgtcata 35963313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 40205128 - 40205070
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataag 235  Q
    |||||||| | ||||||||||| ||||||||||||||||  ||||||| |||| |||||    
T  40205128 aagctatcctggagagcttatagaaataagctgaaaacagattatggacatgttataag 40205070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 110
Target Start/End: Original strand, 11790890 - 11790935
Alignment:
Q  65 gcttgtagcataagagcttatcatataagtgcttatgcatacacta 110  Q
    ||||||| |||||| | |||||||||||||||||||||||| ||||    
T  11790890 gcttgtaacataagtgtttatcatataagtgcttatgcataaacta 11790935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 155
Target Start/End: Complemental strand, 35135820 - 35135736
Alignment:
Q  70 tagcataagagcttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttcatata 155  Q
    ||||||||| ||||| |||||||||| ||||| |||   || |||| ||||||||| |||||||||||||||  | ||||||||||    
T  35135820 tagcataagtgcttaacatataagtgtttatgtataagatatttct-ataacaaaagataaaataaagtcaaactattttcatata 35135736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 6109500 - 6109556
Alignment:
Q  178 agctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataa 234  Q
    |||||| || |||||||| |  ||||||||||||||||||||||||| || ||||||    
T  6109500 agctatgttcgagagcttttggaaataagctgaaaacaacttatggacatatcataa 6109556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 7319422 - 7319466
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttat 221  Q
    |||||||||| |||| |||||| ||||||||||||| ||||||||    
T  7319422 aagctatcttggagaacttataaaaataagctgaaagcaacttat 7319466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 8177584 - 8177528
Alignment:
Q  179 gctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataag 235  Q
    |||||| | ||||||||||  |||||| |||||||||||||||||| || |||||||    
T  8177584 gctatcctggagagcttatgaaaataacctgaaaacaacttatggacatatcataag 8177528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 10272485 - 10272425
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    |||| ||||| ||||| ||||  |||||||||||||||||||||  || ||||||||||||    
T  10272485 aagccatcttggagagtttatgaaaataagctgaaaacaacttacagacatgtcataagtt 10272425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 10791090 - 10791146
Alignment:
Q  244 aacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaacag 300  Q
    ||||||||||||||| ||||| ||| | | |||||| |||||||||||| |||||||    
T  10791090 aacagtctcacaagtacttatgtcaattgataagctgaaataagtcaattcaaacag 10791146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 12242764 - 12242704
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    |||||||||| ||||||||||  || |||||||||||||||| |||   ||||||||||||    
T  12242764 aagctatcttggagagcttatggaagtaagctgaaaacaactaatgttcatgtcataagtt 12242704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 116 - 224
Target Start/End: Original strand, 12975304 - 12975409
Alignment:
Q  116 tataacaaaatataaaataaagtcaagatgttttcatatataagctataagatgnnnnnnnaagctatctttgagagcttatataaataagctgaaaaca 215  Q
    |||||||||  |||||||||| ||||  |||||||  |||||||||||||| ||       |||||||||| ||||||||||   |||||| ||||||||    
T  12975304 tataacaaagaataaaataaaatcaaattgttttc--atataagctataagctgtgttcataagctatcttggagagcttat-ggaataagttgaaaaca 12975400  T
Q  216 acttatgga 224  Q
    |||||||||    
T  12975401 acttatgga 12975409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 14706253 - 14706205
Alignment:
Q  249 tctcacaagttcttatatcattagttaagctcaaataagtcaatccaaa 297  Q
    ||||||||||  |||| ||| ||| ||||||||||||||||||||||||    
T  14706253 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 14706205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 244 - 292
Target Start/End: Complemental strand, 16016400 - 16016352
Alignment:
Q  244 aacagtctcacaagttcttatatcattagttaagctcaaataagtcaat 292  Q
    |||||||| |||||| ||||| ||||| | |||||||||||||||||||    
T  16016400 aacagtctgacaagtgcttatgtcatttgataagctcaaataagtcaat 16016352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 189 - 221
Target Start/End: Complemental strand, 20028532 - 20028500
Alignment:
Q  189 agagcttatataaataagctgaaaacaacttat 221  Q
    |||||||||| ||||||||||||||||||||||    
T  20028532 agagcttatagaaataagctgaaaacaacttat 20028500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 31208568 - 31208624
Alignment:
Q  244 aacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaacag 300  Q
    |||||||||||  || ||||| ||| ||||| || ||||||||||||||||||||||    
T  31208568 aacagtctcacgggtgcttatgtcagtagttcagttcaaataagtcaatccaaacag 31208624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 156; Significance: 1e-82; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 372 - 554
Target Start/End: Original strand, 6942980 - 6943162
Alignment:
Q  372 aattctctataagtatagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatcaatatccattgtatcctgtttt 471  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6942980 aattctctataagtatagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatcaatatccattgtatcctgtttt 6943079  T
Q  472 tgatctagattaacacaaatttgctgtttttacctcatttcaccattcatccnnnnnnnnngaaatgaatggtttctagaatt 554  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||    
T  6943080 tgatctagattaacacaaatttgctgtttttacctcatttcaccattcatccaaaaaaaaagaaatgaatggtttctagaatt 6943162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 372 - 521
Target Start/End: Original strand, 5597696 - 5597845
Alignment:
Q  372 aattctctataagtatagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatcaatatccattgtatcctgtttt 471  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||  ||||||||||||||||||||||||||||| || || |    
T  5597696 aattctctataagtatagaattaagggcttgttattcaacagtataacataactaatatactagtgtcaaccaatatcaatatccattgtattctattat 5597795  T
Q  472 tgatctagattaacacaaatttgctgtttttacctcatttcaccattcat 521  Q
    | |||||||||||||||||||| |  |||| |||| ||||||||||||||    
T  5597796 tcatctagattaacacaaattttcccttttcaccttatttcaccattcat 5597845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 386 - 478
Target Start/End: Original strand, 48897192 - 48897278
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatcaatatccattgtatcctgtttttgatcta 478  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||| || |||||    
T  48897192 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtca------atcaatatccattgtatcctgttattcatcta 48897278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 386 - 483
Target Start/End: Original strand, 35358679 - 35358770
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatcaatatccattgtatcctgtttttgatctagatta 483  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||||      ||||| |||||||||||| |||| || ||||||||||    
T  35358679 atagaattaagggcttcttattcaatagtataacatgacttatataccggtgtca------atcaaaatccattgtatcttgttattcatctagatta 35358770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 386 - 441
Target Start/End: Original strand, 15993137 - 15993192
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaa 441  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  15993137 atagaattaagtgcttgttattcaatagtataacatgacttatataccggtgtcaa 15993192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 438
Target Start/End: Original strand, 37746866 - 37746918
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgt 438  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  37746866 atagaagtaagggcttgttattcaatagtataacatgacttatataccggtgt 37746918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 386 - 431
Target Start/End: Original strand, 11846469 - 11846514
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatata 431  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  11846469 atagaattaagggtttgttattcaacagtataacatgacttatata 11846514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 388 - 440
Target Start/End: Complemental strand, 28394421 - 28394369
Alignment:
Q  388 agaattaagggcttgttattcaacagtataacatgacttatataccggtgtca 440  Q
    |||||||||| |||||||||||||| |||||||||||||||| ||||||||||    
T  28394421 agaattaaggacttgttattcaacaatataacatgacttatacaccggtgtca 28394369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 181 - 297
Target Start/End: Original strand, 35267382 - 35267498
Alignment:
Q  181 tatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagttctctataacagtctcacaagttcttatatcattagttaagctc 280  Q
    |||||| ||||||||||| |||||||||||||||||| |||| | |||||||||| | |||  || || |||| |||||| |||   | ||| |||||||    
T  35267382 tatcttggagagcttatagaaataagctgaaaacaacctatgaacatgtcataagctttctcaaataggctcataagttcatatggtagtagataagctc 35267481  T
Q  281 aaataagtcaatccaaa 297  Q
    |||||||||||| ||||    
T  35267482 aaataagtcaattcaaa 35267498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 177 - 296
Target Start/End: Original strand, 529391 - 529510
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagttctctataacagtctcacaagttcttatatcattagttaa 276  Q
    |||||||||| ||||||||||  ||||| | |||||||| |||||| |  ||||||||||||||   || || |||||||||  ||||  || ||| |||    
T  529391 aagctatcttggagagcttatgaaaatatgttgaaaacagcttatgaacttgtcataagttctcccaaatagcctcacaagtgtttatgccagtagataa 529490  T
Q  277 gctcaaataagtcaatccaa 296  Q
    ||||||||||||||||||||    
T  529491 gctcaaataagtcaatccaa 529510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 65 - 137
Target Start/End: Original strand, 24975811 - 24975882
Alignment:
Q  65 gcttgtagcataagagcttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaag 137  Q
    |||||||||||| | |||||||||||||||||| ||| |||  ||||||| |||||||||| |||||||||||    
T  24975811 gcttgtagcatatgtgcttatcatataagtgctgatgtataatctacttc-tataacaaaagataaaataaag 24975882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 483
Target Start/End: Original strand, 36709769 - 36709834
Alignment:
Q  412 agtataacatgacttatataccggtgtcaaccaatatcaatatccattgtatcctgtttttgatctagatta 483  Q
    |||||||||||||||||||||||||||||      |||||||||||||||||| |||| || ||||||||||    
T  36709769 agtataacatgacttatataccggtgtca------atcaatatccattgtatcttgttattcatctagatta 36709834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 82 - 161
Target Start/End: Original strand, 30751441 - 30751519
Alignment:
Q  82 ttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttcatatataagct 161  Q
    ||||||||||||||||| || ||| |||| || || ||||||||||||||||||||||||  | ||||||||||| ||||    
T  30751441 ttatcatataagtgcttgtgaataaactattt-ttgtaacaaaatataaaataaagtcaaattattttcatatattagct 30751519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 390 - 483
Target Start/End: Complemental strand, 38092670 - 38092582
Alignment:
Q  390 aattaagggcttgttattcaacagtataacatgacttat-ataccggtgtcaaccaatatcaatatccattgtatcctgtttttgatctagatta 483  Q
    ||||||||| ||||||||||||| ||||||||||||| | |||||||| |||      |||||||||||||||||||| || || ||||||||||    
T  38092670 aattaaggggttgttattcaacattataacatgacttctaataccggtatca------atcaatatccattgtatcctattattcatctagatta 38092582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 428
Target Start/End: Complemental strand, 32041526 - 32041484
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttat 428  Q
    |||||||||||||||| |||||||| |||||||||||||||||    
T  32041526 atagaattaagggcttcttattcaatagtataacatgacttat 32041484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 39566257 - 39566204
Alignment:
Q  181 tatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataa 234  Q
    |||||||||||||||||   |||||||||||||||||||||||| |||| ||||    
T  39566257 tatctttgagagcttatcagaataagctgaaaacaacttatggacatgtgataa 39566204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 46082063 - 46082112
Alignment:
Q  188 gagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    ||||||||||  ||||||||||||||||||||||||  ||||||||||||    
T  46082063 gagagcttatgaaaataagctgaaaacaacttatggtcatgtcataagtt 46082112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 229 - 301
Target Start/End: Complemental strand, 4970780 - 4970709
Alignment:
Q  229 tcataagttctctataacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaacagg 301  Q
    ||||||||||||   ||||||||||||||  ||||| |||  || ||||||||||||||||||||||||||||    
T  4970780 tcataagttctcccaaacagtctcacaaga-cttatgtcacgagataagctcaaataagtcaatccaaacagg 4970709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 17989137 - 17989097
Alignment:
Q  115 ttataacaaaatataaaataaagtcaagatgttttcatata 155  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  17989137 ttataacaaaatataaaataaagtcaaactgttttcatata 17989097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 155
Target Start/End: Original strand, 30496629 - 30496700
Alignment:
Q  83 tatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttcatata 155  Q
    ||||| ||||||| ||||| ||| |||| |||| |||||||||||||||||||||||||  ||||||| ||||    
T  30496629 tatcacataagtgtttatgtataaactatttct-ataacaaaatataaaataaagtcaaattgttttcgtata 30496700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 237
Target Start/End: Original strand, 39360039 - 39360099
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    |||||||| | | ||||||||  ||||||||||||| ||||||||||| ||||||||||||    
T  39360039 aagctatcctggcgagcttattgaaataagctgaaagcaacttatggatatgtcataagtt 39360099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 155
Target Start/End: Complemental strand, 45593872 - 45593793
Alignment:
Q  75 taagagcttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttcatata 155  Q
    |||||| ||||||||||| |||||||| |||  ||| ||||  |||||||| |||||||||||||||  ||||||||||||    
T  45593872 taagagtttatcatataaatgcttatgtataagctatttctg-taacaaaacataaaataaagtcaaactgttttcatata 45593793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 47134811 - 47134751
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    |||||||  |||| |||||||  |||||||||||||||||||||||||  |||||||||||    
T  47134811 aagctattcttgaaagcttatgaaaataagctgaaaacaacttatggacgtgtcataagtt 47134751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 141
Target Start/End: Complemental strand, 753350 - 753292
Alignment:
Q  82 ttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaa 141  Q
    |||||||||||| |||| || |||||||| |||| |||||||||||| ||||||||||||    
T  753350 ttatcatataagcgcttgtgtatacactatttct-ataacaaaatatgaaataaagtcaa 753292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 33894723 - 33894778
Alignment:
Q  244 aacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaaca 299  Q
    ||||||||||||||| ||||| ||||| | ||||||||||||||  ||||||||||    
T  33894723 aacagtctcacaagtgcttatgtcatttgataagctcaaataagctaatccaaaca 33894778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 118 - 156
Target Start/End: Complemental strand, 816057 - 816019
Alignment:
Q  118 taacaaaatataaaataaagtcaagatgttttcatatat 156  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  816057 taacaaaatataaaataaagtcaaattgttttcatatat 816019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 24363655 - 24363601
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtca 231  Q
    |||||||| | ||||| ||||  ||||||||||||||||||||||||| ||||||    
T  24363655 aagctatcctggagaggttatggaaataagctgaaaacaacttatggacatgtca 24363601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 33871267 - 33871322
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataa 234  Q
    |||||||||| ||||||  ||||||||||||| ||||||||||||| | |||||||||    
T  33871267 aagctatcttggagagc--atataaataagctcaaaacaacttatgaacatgtcataa 33871322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 39568364 - 39568318
Alignment:
Q  191 agcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    |||||| | |||||||| |||||||||||||||| ||||||||||||    
T  39568364 agcttacagaaataagccgaaaacaacttatggacatgtcataagtt 39568318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 42281568 - 42281510
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataag 235  Q
    ||||||||  |||||||||||| ||||||||||||||||| ||||  | ||||||||||    
T  42281568 aagctatcactgagagcttatagaaataagctgaaaacaaattatttacatgtcataag 42281510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 44239094 - 44239056
Alignment:
Q  115 ttataacaaaatataaaataaagtcaagatgttttcata 153  Q
    ||||||||||| ||||||||||||||| |||||||||||    
T  44239094 ttataacaaaagataaaataaagtcaaaatgttttcata 44239056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 230 - 300
Target Start/End: Original strand, 47007055 - 47007125
Alignment:
Q  230 cataagttctctataacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaacag 300  Q
    |||||| |||| ||||||||||||||||| |||||  || | | ||||||||||||| |||||| ||||||    
T  47007055 cataagctctccataacagtctcacaagtacttatgccaatggataagctcaaataactcaatcaaaacag 47007125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 222
Target Start/End: Original strand, 7244696 - 7244741
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatg 222  Q
    ||||||| || ||||||||||  |||||||||||||||||||||||    
T  7244696 aagctatattggagagcttatgaaaataagctgaaaacaacttatg 7244741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 8427109 - 8427162
Alignment:
Q  244 aacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaa 297  Q
    ||||||||||||||| ||||| | | ||| ||||||||||||| ||||||||||    
T  8427109 aacagtctcacaagtacttatgttagtagataagctcaaataaatcaatccaaa 8427162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 297
Target Start/End: Original strand, 9210933 - 9210970
Alignment:
Q  260 cttatatcattagttaagctcaaataagtcaatccaaa 297  Q
    ||||||||| ||| ||||||||||||||||||||||||    
T  9210933 cttatatcagtagataagctcaaataagtcaatccaaa 9210970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 9423648 - 9423591
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataa 234  Q
    |||||||| | |||||||| |  ||||||||||||||||||||||| | |||||||||    
T  9423648 aagctatcctggagagcttcttgaaataagctgaaaacaacttatgaacatgtcataa 9423591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 237
Target Start/End: Complemental strand, 12234932 - 12234883
Alignment:
Q  188 gagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    ||||||||||  |||||||||||||||| ||||| || ||||||||||||    
T  12234932 gagagcttatggaaataagctgaaaacagcttatagacatgtcataagtt 12234883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 22551454 - 22551401
Alignment:
Q  182 atctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataag 235  Q
    ||||| |||||||||| ||||||||||||||||||| | || | ||||||||||    
T  22551454 atcttggagagcttatgtaaataagctgaaaacaacatttgaacatgtcataag 22551401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 33894666 - 33894699
Alignment:
Q  200 aaataagctgaaaacaacttatggaaatgtcata 233  Q
    ||||||||||||||||||||||||| ||||||||    
T  33894666 aaataagctgaaaacaacttatggacatgtcata 33894699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 39539812 - 39539775
Alignment:
Q  200 aaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    |||||||||||||||| |||||||| ||||||||||||    
T  39539812 aaataagctgaaaacagcttatggacatgtcataagtt 39539775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 46281179 - 46281134
Alignment:
Q  192 gcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    ||||||||||||||||||||||||| |||| || ||| ||||||||    
T  46281179 gcttatataaataagctgaaaacaatttatagacatggcataagtt 46281134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 139
Target Start/End: Original strand, 5373142 - 5373205
Alignment:
Q  75 taagagcttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtc 139  Q
    |||| ||||||||| |||||||||||| |||  ||| |||| ||||||||| |||||||||||||    
T  5373142 taagtgcttatcatgtaagtgcttatgtatatgctatttct-ataacaaaagataaaataaagtc 5373205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 200 - 268
Target Start/End: Complemental strand, 6552323 - 6552255
Alignment:
Q  200 aaataagctgaaaacaacttatggaaatgtcataagttctctataacagtctcacaagttcttatatca 268  Q
    |||||||||||||||| |||||| | |||||||||| ||||   |||| |||||||| | |||||||||    
T  6552323 aaataagctgaaaacagcttatgaatatgtcataagctctcgcgaacaatctcacaaatacttatatca 6552255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 8799889 - 8799921
Alignment:
Q  202 ataagctgaaaacaacttatggaaatgtcataa 234  Q
    ||||||||||||| |||||||||||||||||||    
T  8799889 ataagctgaaaaccacttatggaaatgtcataa 8799921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 29363604 - 29363660
Alignment:
Q  244 aacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaacag 300  Q
    ||||||||||||||| ||||| | | ||| |||| ||||||||| ||||||||||||    
T  29363604 aacagtctcacaagtgcttatgttagtagataagttcaaataagccaatccaaacag 29363660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 229 - 301
Target Start/End: Complemental strand, 30749023 - 30748951
Alignment:
Q  229 tcataagttctctataacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaacagg 301  Q
    |||||||||||||  ||||||||||||    ||||| ||| ||| ||||||||||||| ||||| ||||||||    
T  30749023 tcataagttctctcaaacagtctcacattggcttatgtcagtagataagctcaaataactcaattcaaacagg 30748951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 300
Target Start/End: Complemental strand, 37064426 - 37064386
Alignment:
Q  260 cttatatcattagttaagctcaaataagtcaatccaaacag 300  Q
    ||||||||| ||| |||| ||||||||||||||||||||||    
T  37064426 cttatatcagtagataagatcaaataagtcaatccaaacag 37064386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 83 - 139
Target Start/End: Original strand, 46213728 - 46213783
Alignment:
Q  83 tatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtc 139  Q
    ||||||||||||||||||| | |  ||| |||| |||||||||||||||||||||||    
T  46213728 tatcatataagtgcttatgtaaaagctatttct-ataacaaaatataaaataaagtc 46213783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 152; Significance: 3e-80; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 372 - 523
Target Start/End: Complemental strand, 18304106 - 18303955
Alignment:
Q  372 aattctctataagtatagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatcaatatccattgtatcctgtttt 471  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18304106 aattctctataagtatagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatcaatatccattgtatcctgtttt 18304007  T
Q  472 tgatctagattaacacaaatttgctgtttttacctcatttcaccattcatcc 523  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18304006 tgatctagattaacacaaatttgctgtttttacctcatttcaccattcatcc 18303955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 372 - 523
Target Start/End: Original strand, 18031213 - 18031367
Alignment:
Q  372 aattctctataagtatagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatcaatatccattgtatcctgtttt 471  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||| |||||||||||||||||||||| |    
T  18031213 aattctctataagtatagaattaagggcttgttattcaacaatataacatgacttatataccggtgacagccaatgtcaatatccattgtatcctgttat 18031312  T
Q  472 tgatctagattaacacaaatttgc---tgtttttacctcatttcaccattcatcc 523  Q
    | ||||||||||||||||||| ||   | ||||||||||||||||||||||||||    
T  18031313 tcatctagattaacacaaattcgcttttttttttacctcatttcaccattcatcc 18031367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 399 - 522
Target Start/End: Complemental strand, 33166645 - 33166522
Alignment:
Q  399 cttgttattcaacagtataacatgacttatataccggtgtcaaccaatatcaatatccattgtatcctgtttttgatctagattaacacaaatttgctgt 498  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| || |    
T  33166645 cttgttattcaacaatataacatgacttatatatcggtgtcaaccaatatcaatatccattgtatcctgttattcatctagattaacacaaattttcttt 33166546  T
Q  499 ttttacctcatttcaccattcatc 522  Q
    ||||||||||||||||||||||||    
T  33166545 ttttacctcatttcaccattcatc 33166522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 386 - 452
Target Start/End: Complemental strand, 9135767 - 9135701
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatcaat 452  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||    
T  9135767 atagaattaagggcttgttattcaacagtataatatgacttatataccggtgttaatcaatatcaat 9135701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 386 - 441
Target Start/End: Complemental strand, 21076411 - 21076356
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaa 441  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21076411 atagaattaagggcttgttattcaatagtataacatgacttatataccggtgtcaa 21076356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 386 - 441
Target Start/End: Original strand, 46080083 - 46080138
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaa 441  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  46080083 atagaattaagggcttgttattcaatagtataacatgacttatataccggtgtcaa 46080138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 386 - 483
Target Start/End: Complemental strand, 4432242 - 4432151
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatcaatatccattgtatcctgtttttgatctagatta 483  Q
    ||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||      |||||||||||||||||| |||| || ||||||||||    
T  4432242 atagaattaagggtttgttattcaacagtataacatgatttaaataccggtgtca------atcaatatccattgtatcatgttattcatctagatta 4432151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 386 - 483
Target Start/End: Original strand, 44199287 - 44199378
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatcaatatccattgtatcctgtttttgatctagatta 483  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||||||||| ||      ||||||||||||||||||||||| || ||||||||||    
T  44199287 atagaattaagggtttgttattcaactatataacatgacttatataccggtgcca------atcaatatccattgtatcctgttattcatctagatta 44199378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 386 - 449
Target Start/End: Complemental strand, 938269 - 938207
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatc 449  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||    
T  938269 atagaattaagggcttgttatt-aacggtataacatgacttatataccggtgtcaatcaatatc 938207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 386 - 441
Target Start/End: Complemental strand, 2712592 - 2712537
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaa 441  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  2712592 atagaattaagggcttgttattcaatagtataacatgacttatataccgctgtcaa 2712537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 386 - 441
Target Start/End: Original strand, 42250955 - 42251010
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaa 441  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  42250955 atagaattaagggcttgttattcaattgtataacatgacttatataccggtgtcaa 42251010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 386 - 439
Target Start/End: Complemental strand, 33268773 - 33268720
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtc 439  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  33268773 atagaattaagggcttgttattcgatagtataacatgacttatataccggtgtc 33268720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 449
Target Start/End: Complemental strand, 34857687 - 34857624
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatc 449  Q
    ||||||||||| || |||||||||||| ||||||||||||| ||||||||| |||| |||||||    
T  34857687 atagaattaagtgcatgttattcaacaatataacatgacttgtataccggtatcaatcaatatc 34857624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 53673712 - 53673665
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatgga 224  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||    
T  53673712 aagctatcttggagagcttatgtaaataagctgaaaacaacttatgga 53673665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 23819105 - 23819163
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataag 235  Q
    ||||||||||  |||||||||| ||||||| ||||||||||||||||| ||||||||||    
T  23819105 aagctatcttgaagagcttatagaaataagatgaaaacaacttatggacatgtcataag 23819163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 231
Target Start/End: Complemental strand, 33534215 - 33534169
Alignment:
Q  185 tttgagagcttatataaataagctgaaaacaacttatggaaatgtca 231  Q
    |||||||||||||  ||||||||||||||||||||||||| ||||||    
T  33534215 tttgagagcttatgaaaataagctgaaaacaacttatggatatgtca 33534169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 203 - 296
Target Start/End: Original strand, 46859972 - 46860066
Alignment:
Q  203 taagctgaaaacaacttatggaa-atgtcataagttctctataacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaa 296  Q
    ||||||||||||||||||   || |||||||||| |||||  |||||| |||||||| ||||| | | ||| |||| ||||||||||||||||||    
T  46859972 taagctgaaaacaacttacctaacatgtcataagctctctcaaacagtttcacaagtgcttatgtgaatagataagttcaaataagtcaatccaa 46860066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 155
Target Start/End: Complemental strand, 54325184 - 54325111
Alignment:
Q  81 cttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttcatata 155  Q
    |||||||||||||||||| || ||| |||| |||| || |||||| |||||||||||||||  ||||||||||||    
T  54325184 cttatcatataagtgcttgtgtataaactatttct-attacaaaagataaaataaagtcaaactgttttcatata 54325111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 177 - 222
Target Start/End: Original strand, 46110219 - 46110264
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatg 222  Q
    |||||||  ||||||||||||| |||||||||||||||||||||||    
T  46110219 aagctatgattgagagcttatagaaataagctgaaaacaacttatg 46110264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 229 - 297
Target Start/End: Original strand, 4071959 - 4072026
Alignment:
Q  229 tcataagttctctataacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaa 297  Q
    ||||||| |||||  ||||||||||||||| ||||||| | ||||||| ||||||||| ||||||||||    
T  4071959 tcataagctctctcaaacagtctcacaagtgcttatattaatagttaacctcaaataa-tcaatccaaa 4072026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 137
Target Start/End: Original strand, 4471078 - 4471149
Alignment:
Q  65 gcttgtagcataagagcttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaag 137  Q
    |||| |||||||||   |||| ||||||||||||||||||| |||| || ||||||||||| |||||||||||    
T  4471078 gcttatagcataagcaattattatataagtgcttatgcataaacta-tttttataacaaaagataaaataaag 4471149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 155
Target Start/End: Original strand, 18630605 - 18630676
Alignment:
Q  83 tatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttcatata 155  Q
    ||||||||||| ||||||||||| |||| |||  ||||||||| |||||||||||||||   |||||||||||    
T  18630605 tatcatataagcgcttatgcataaactatttca-ataacaaaagataaaataaagtcaattggttttcatata 18630676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 81 - 233
Target Start/End: Complemental strand, 30207717 - 30207569
Alignment:
Q  81 cttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttcatatataagctataagatgnnnnnnnaagc 180  Q
    ||||||||||||||||||||| |||   || |||| ||||||||| |||||||||| ||||  ||||||||||||  ||||||||| ||       ||||    
T  30207717 cttatcatataagtgcttatgtatatgttagttct-ataacaaaaaataaaataaa-tcaaactgttttcatata--agctataagttgttttcataagc 30207622  T
Q  181 tatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcata 233  Q
    || ||| ||||| ||||  |||||||||||||||| ||||  || ||||||||    
T  30207621 taccttagagagattatggaaataagctgaaaacagcttacagacatgtcata 30207569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 32066557 - 32066502
Alignment:
Q  80 gcttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaa 136  Q
    ||||||| |||||||||||||| ||| ||||||| ||||||||||| ||||||||||    
T  32066557 gcttatcgtataagtgcttatgtataaactactt-ttataacaaaagataaaataaa 32066502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 47970323 - 47970371
Alignment:
Q  188 gagagcttatataaataagctgaaaacaacttatggaaatgtcataagt 236  Q
    ||||||||||  ||||||||||||||||| |||||||||||||| ||||    
T  47970323 gagagcttatgcaaataagctgaaaacaatttatggaaatgtcacaagt 47970371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 52735138 - 52735217
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagttctctataacagtctcacaag 257  Q
    ||||||||||  |||||||||  ||||||||| |||| ||| |||||| |||||||||| ||||  |||||||||||||||    
T  52735138 aagctatcttgaagagcttatggaaataagct-aaaataacatatggacatgtcataagctctccctaacagtctcacaag 52735217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 5131304 - 5131257
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatgga 224  Q
    |||||||| | ||||||||||  |||||||||||||||||||||||||    
T  5131304 aagctatcctggagagcttatggaaataagctgaaaacaacttatgga 5131257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 237
Target Start/End: Original strand, 46401286 - 46401340
Alignment:
Q  182 atctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    ||||| |||||||||| ||||||||||||| |||||||||| | ||||||||||||    
T  46401286 atcttggagagcttat-taaataagctgaatacaacttatgaacatgtcataagtt 46401340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 301
Target Start/End: Complemental strand, 54581101 - 54581070
Alignment:
Q  270 tagttaagctcaaataagtcaatccaaacagg 301  Q
    ||||||||||||||||||||||||||||||||    
T  54581101 tagttaagctcaaataagtcaatccaaacagg 54581070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 7063574 - 7063636
Alignment:
Q  230 cataagttctctataacagtctcacaagttcttatatcattagttaagctcaaataagtcaat 292  Q
    |||||| |||||  ||||||||||||||| | ||||||||||| | ||||||||||| |||||    
T  7063574 cataagatctcttaaacagtctcacaagtacctatatcattagatgagctcaaataaatcaat 7063636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 200 - 293
Target Start/End: Original strand, 35743321 - 35743414
Alignment:
Q  200 aaataagctgaaaacaacttatggaaatgtcataagttct-ctataacagtctcacaagttcttatatcattagttaagctcaaataagtcaatc 293  Q
    ||||||| || |||||||||||  | |||||||||| ||| ||| ||||||||||||| | ||||||| | ||| ||| ||||||||||||||||    
T  35743321 aaataagttggaaacaacttataaacatgtcataagctcttcta-aacagtctcacaaatgcttatattagtagataatctcaaataagtcaatc 35743414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 178 - 256
Target Start/End: Original strand, 42121505 - 42121582
Alignment:
Q  178 agctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagttctctataacagtctcacaa 256  Q
    ||||||||| |||| ||| |  ||||||||||||| || |||||| | ||||||||||||||||  |||||||||||||    
T  42121505 agctatcttggagaacttgtggaaataagctgaaa-cagcttatgaacatgtcataagttctctcaaacagtctcacaa 42121582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 73 - 155
Target Start/End: Original strand, 46796933 - 46797014
Alignment:
Q  73 cataagagcttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttcatata 155  Q
    |||||| ||||||||||||||| ||||||||||  ||| || | ||||||||  |||||||||| |||| |||||| ||||||    
T  46796933 cataagtgcttatcatataagttcttatgcataagcta-ttttcataacaaacgataaaataaattcaatatgtttccatata 46797014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 51556013 - 51555956
Alignment:
Q  82 ttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtca 140  Q
    |||||||||||||||||||| |||  ||| || ||||||||||| ||||||||||||||    
T  51556013 ttatcatataagtgcttatgtataagcta-ttattataacaaaagataaaataaagtca 51555956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 23503474 - 23503538
Alignment:
Q  74 ataagagcttatcat-ataagtgcttatgcatacactacttcttataacaaaatataaaataaagt 138  Q
    ||||| ||||||||| ||||||||||||| |||  ||| |||| ||||||||||||||||||||||    
T  23503474 ataagcgcttatcatgataagtgcttatgtataatctaattct-ataacaaaatataaaataaagt 23503538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 155
Target Start/End: Original strand, 30024624 - 30024696
Alignment:
Q  82 ttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttcatata 155  Q
    ||||||||||||| ||||||||||   || |||| ||||||||| |||||||||||| ||  ||||||||||||    
T  30024624 ttatcatataagtacttatgcataagttatttct-ataacaaaagataaaataaagtaaaattgttttcatata 30024696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 155
Target Start/End: Original strand, 44319862 - 44319945
Alignment:
Q  70 tagcataagagcttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttcatata 155  Q
    |||||||||  ||||||||||||||||| ||| ||| |||| ||| ||||| |||| ||||||||||||| |  ||||||||||||    
T  44319862 tagcataagcacttatcatataagtgctcatgtataaactatttc-tataa-aaaagataaaataaagtcgaactgttttcatata 44319945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 244 - 296
Target Start/End: Original strand, 1017124 - 1017176
Alignment:
Q  244 aacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaa 296  Q
    |||||||||||||||  |||| ||| ||| | |||||||||||||||||||||    
T  1017124 aacagtctcacaagtgtttatgtcagtagattagctcaaataagtcaatccaa 1017176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 237
Target Start/End: Original strand, 2996589 - 2996649
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    |||||||||| |||||| |||  ||||||| |||||| | |||||||| ||||||||||||    
T  2996589 aagctatcttggagagcgtatgaaaataagttgaaaaaagcttatggacatgtcataagtt 2996649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 82 - 153
Target Start/End: Original strand, 4191663 - 4191734
Alignment:
Q  82 ttatcatataagtgcttatgcatacactacttcttataacaaaatat-aaaataaagtcaagatgttttcata 153  Q
    |||||||||||||||||||| |||  ||| ||| |||||||||| || |||||||||||||  ||||||||||    
T  4191663 ttatcatataagtgcttatgtataagctatttc-tataacaaaagataaaaataaagtcaaactgttttcata 4191734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 19429725 - 19429777
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgt 229  Q
    |||||||| | ||||||||||  |||||||||||||||| ||||||| |||||    
T  19429725 aagctatcctggagagcttatggaaataagctgaaaacagcttatggcaatgt 19429777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 300
Target Start/End: Complemental strand, 27043788 - 27043748
Alignment:
Q  260 cttatatcattagttaagctcaaataagtcaatccaaacag 300  Q
    ||||| ||| ||| |||||||||||||||||||||||||||    
T  27043788 cttatgtcagtagataagctcaaataagtcaatccaaacag 27043748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 27721756 - 27721792
Alignment:
Q  200 aaataagctgaaaacaacttatggaaatgtcataagt 236  Q
    |||||||||||||||| |||||||| |||||||||||    
T  27721756 aaataagctgaaaacagcttatggatatgtcataagt 27721792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 248 - 300
Target Start/End: Original strand, 32071963 - 32072015
Alignment:
Q  248 gtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaacag 300  Q
    ||||||||||| ||||| ||| ||| ||| ||||||||||||| |||||||||    
T  32071963 gtctcacaagtgcttatgtcaatagataaactcaaataagtcagtccaaacag 32072015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 32799794 - 32799730
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagttctct 241  Q
    |||||||| | ||||| ||||  |||||||||||||||| ||||||||  ||||||||| |||||    
T  32799794 aagctatcatagagagtttatcgaaataagctgaaaacagcttatggatgtgtcataagctctct 32799730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 46415846 - 46415790
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcata 233  Q
    |||||||| | |||||||||   |||| |||||||||||||||||||| ||||||||    
T  46415846 aagctatcctcgagagcttagtaaaattagctgaaaacaacttatggacatgtcata 46415790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 1e-54; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 372 - 523
Target Start/End: Original strand, 37873848 - 37874002
Alignment:
Q  372 aattctctataagtatagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatcaatatccattgtatcctgtttt 471  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||| |||||||||||||||||||||| |    
T  37873848 aattctctataagtatagaattaagggcttgttattcaacaatataacatgacttatataccggtgacagccaatgtcaatatccattgtatcctgttat 37873947  T
Q  472 tgatctagattaacacaaatttgc---tgtttttacctcatttcaccattcatcc 523  Q
    | ||||||||||||||||||| ||   | ||||||||||||||||||||||||||    
T  37873948 tcatctagattaacacaaattcgcttttttttttacctcatttcaccattcatcc 37874002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 386 - 483
Target Start/End: Original strand, 18859752 - 18859843
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatcaatatccattgtatcctgtttttgatctagatta 483  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||      |||||||||||||||||| |||| || ||||||||||    
T  18859752 atagaattaagggcttgttattcaatagtataacatgacttatataccggtgtca------atcaatatccattgtatcttgttattcatctagatta 18859843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 386 - 452
Target Start/End: Complemental strand, 5203544 - 5203478
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatcaat 452  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||    
T  5203544 atagaattaagggcttgttattcaatagtataacatgacttatataccggtgtcaatcaaaatcaat 5203478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 386 - 483
Target Start/End: Original strand, 18696201 - 18696292
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatcaatatccattgtatcctgtttttgatctagatta 483  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||      ||||| |||||||||||| |||| || ||||||||||    
T  18696201 atagaattaagggcttgttattcaatagtataacatgacttatataccggtgtca------atcaaaatccattgtatcttgttattcatctagatta 18696292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 390 - 482
Target Start/End: Complemental strand, 11829465 - 11829379
Alignment:
Q  390 aattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatcaatatccattgtatcctgtttttgatctagatt 482  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||      ||||||||||||| ||||||||| || |||||||||    
T  11829465 aattaaaggcttgttattcaacagtataacatgacttatataccggtgtca------atcaatatccattatatcctgttattcatctagatt 11829379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 200 - 300
Target Start/End: Original strand, 6547941 - 6548041
Alignment:
Q  200 aaataagctgaaaacaacttatggaaatgtcataagttctctataacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaaca 299  Q
    |||||||||||||||| |||||||| ||| |||||| || ||  |||||||||||||||||||||   | ||| ||||||  ||||||||||||||||||    
T  6547941 aaataagctgaaaacagcttatggacatggcataagctccctcaaacagtctcacaagttcttatgctagtagataagcttgaataagtcaatccaaaca 6548040  T
Q  300 g 300  Q
    |    
T  6548041 g 6548041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 201 - 301
Target Start/End: Complemental strand, 43911029 - 43910930
Alignment:
Q  201 aataagctgaaaacaacttatggaaatgtcataagttctctataacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaacag 300  Q
    |||||||||||||||||||||| | ||||||||||||||||  || |||||||||| | ||||| ||   |  ||| |||||||||||||||||||||||    
T  43911029 aataagctgaaaacaacttatgaacatgtcataagttctctcaaatagtctcacaaatgcttat-tctggaaataaactcaaataagtcaatccaaacag 43910931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 14299683 - 14299625
Alignment:
Q  179 gctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    ||||||||||| |||||||| |||||||||||||||||  |||||| ||||||||||||    
T  14299683 gctatctttgacagcttatagaaataagctgaaaacaatgtatggatatgtcataagtt 14299625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 386 - 483
Target Start/End: Original strand, 34067514 - 34067605
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatcaatatccattgtatcctgtttttgatctagatta 483  Q
    |||||||||||| |||||||||||||| |||||||||||||||||| | ||||      | ||||||||||| |||||| |||| || ||||||||||    
T  34067514 atagaattaaggacttgttattcaacaatataacatgacttatatatcagtgt------acatcaatatccactgtatcatgttattcatctagatta 34067605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 81 - 155
Target Start/End: Original strand, 37053517 - 37053590
Alignment:
Q  81 cttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttcatata 155  Q
    ||||||||||||||||||||| ||| |||| |||| |||||| || |||||||||||||||  ||||||||||||    
T  37053517 cttatcatataagtgcttatgtatagactatttct-ataacagaaaataaaataaagtcaaactgttttcatata 37053590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 44458392 - 44458334
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataag 235  Q
    |||||||| | ||||| ||||||||||||||| ||||||||||||||| ||||||||||    
T  44458392 aagctatcatggagagtttatataaataagctaaaaacaacttatggatatgtcataag 44458334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 82 - 166
Target Start/End: Original strand, 5903225 - 5903307
Alignment:
Q  82 ttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttcatatataagctataag 166  Q
    |||| |||||||| |||||||||||  || |||| ||||||||||||||||||||||||| ||| ||| |||| |||||||||||    
T  5903225 ttattatataagttcttatgcatacgttatttct-ataacaaaatataaaataaagtcaaaatgattttatat-taagctataag 5903307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 34652090 - 34652030
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    |||||||||| ||||||||||  ||||||| |||||||| |||||||| ||||||||||||    
T  34652090 aagctatcttggagagcttatggaaataagttgaaaacagcttatggacatgtcataagtt 34652030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 22878194 - 22878249
Alignment:
Q  244 aacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaaca 299  Q
    ||||||||||||||| ||||| ||| | | ||||||||||||||||||||||||||    
T  22878194 aacagtctcacaagtgcttatgtcagtggataagctcaaataagtcaatccaaaca 22878249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 386 - 433
Target Start/End: Original strand, 25980396 - 25980443
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatatacc 433  Q
    ||||||||||||| ||||||||||| | ||||||||||||||||||||    
T  25980396 atagaattaagggtttgttattcaataatataacatgacttatatacc 25980443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 82 - 220
Target Start/End: Complemental strand, 35329965 - 35329829
Alignment:
Q  82 ttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttcatatataagctataagatg-nnnnnnnaagc 180  Q
    |||||||||||||| ||||||||| |||| |||  |||||| || |||||||||||||||| || ||||  | |||||||||||| ||        ||||    
T  35329965 ttatcatataagtgtttatgcataaactatttc-cataacataagataaaataaagtcaagctgctttc--acataagctataagctgtctacataaagc 35329869  T
Q  181 tatctttgagagcttatataaataagctgaaaacaactta 220  Q
    |||||| ||||||||||  |||||||||| ||||||||||    
T  35329868 tatcttggagagcttatggaaataagctggaaacaactta 35329829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 301
Target Start/End: Original strand, 40759259 - 40759313
Alignment:
Q  247 agtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaacagg 301  Q
    |||||||||||| ||||| ||| ||| |||||||||||||| |||||||||||||    
T  40759259 agtctcacaagtgcttatgtcaatagataagctcaaataaggcaatccaaacagg 40759313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 15370297 - 15370240
Alignment:
Q  244 aacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaacagg 301  Q
    ||||||||||||| | |||||  || ||| ||||||||||||||||||||||||||||    
T  15370297 aacagtctcacaaatgcttatgccagtagataagctcaaataagtcaatccaaacagg 15370240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 16867755 - 16867812
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataa 234  Q
    |||||||||| ||||||||||  ||||||| ||||||||||||||| | |||||||||    
T  16867755 aagctatcttggagagcttatggaaataagttgaaaacaacttatgaatatgtcataa 16867812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 188 - 237
Target Start/End: Complemental strand, 25796243 - 25796194
Alignment:
Q  188 gagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    ||||||||||  ||||||||||||||||||||||||| |||| |||||||    
T  25796243 gagagcttattgaaataagctgaaaacaacttatggatatgtaataagtt 25796194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 30538204 - 30538167
Alignment:
Q  200 aaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  30538204 aaataagctgaaaacaacttatggacatgtcataagtt 30538167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 33192218 - 33192275
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataa 234  Q
    |||||||| | ||||||||||| | |||||||||||||| |||||||| |||||||||    
T  33192218 aagctatcctggagagcttataaatataagctgaaaacagcttatggatatgtcataa 33192275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 35379070 - 35379025
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatg 222  Q
    |||||||||| ||||||||||  |||||||||||||||||||||||    
T  35379070 aagctatcttggagagcttatgaaaataagctgaaaacaacttatg 35379025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 188 - 237
Target Start/End: Complemental strand, 43065493 - 43065444
Alignment:
Q  188 gagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    ||||||||||  ||||||||||||||||| ||||||| ||||||||||||    
T  43065493 gagagcttattgaaataagctgaaaacaatttatggacatgtcataagtt 43065444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 177 - 222
Target Start/End: Original strand, 44443337 - 44443382
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatg 222  Q
    ||||||||||||||||| |||  |||||||||||||||||||||||    
T  44443337 aagctatctttgagagcatatgaaaataagctgaaaacaacttatg 44443382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 750830 - 750886
Alignment:
Q  244 aacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaacag 300  Q
    |||| ||||| |||| |||||| || ||| |||||||||||||||||||||||||||    
T  750830 aacattctcaaaagtgcttataccaatagataagctcaaataagtcaatccaaacag 750886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 304
Target Start/End: Original strand, 3973638 - 3973698
Alignment:
Q  244 aacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaacagggcc 304  Q
    |||||||| | |||| ||||||||| | | ||||||||||||||| |||||||||||||||    
T  3973638 aacagtcttataagtgcttatatcagtggataagctcaaataagtgaatccaaacagggcc 3973698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 293
Target Start/End: Original strand, 5781685 - 5781800
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagttctctataacagtctcacaagttcttatatcattagttaa 276  Q
    |||||||| | ||||||||||  ||||||||||||||||  ||||| | |||||||||| ||||   |||||| |||||||| |||| | || | || ||    
T  5781685 aagctatcatagagagcttatggaaataagctgaaaacagtttatgcacatgtcataagctctcgcaaacagtgtcacaagtgcttaaaccagt-gtaaa 5781783  T
Q  277 gctcaaataagtcaatc 293  Q
    | |||||||||||||||    
T  5781784 gttcaaataagtcaatc 5781800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 26671440 - 26671484
Alignment:
Q  249 tctcacaagttcttatatcattagttaagctcaaataagtcaatc 293  Q
    |||||||||| ||||||||||||| ||||||||| ||||||||||    
T  26671440 tctcacaagtacttatatcattagctaagctcaattaagtcaatc 26671484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 32821837 - 32821885
Alignment:
Q  189 agagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    |||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  32821837 agagcttatagaaataaactgaaaacagcttatggacatgtcataagtt 32821885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 41809299 - 41809239
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    |||||||||| || |||||||  ||||||||| ||||||||||||| | ||||||||||||    
T  41809299 aagctatcttagaaagcttatggaaataagctaaaaacaacttatgaacatgtcataagtt 41809239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 264
Target Start/End: Complemental strand, 1893335 - 1893249
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagttctctataacagtctcacaagttcttat 264  Q
    |||||||||| |||| ||| |  |||||||||||||| |||||||| | |||||||||||| |||  |||||||| |||||| |||||    
T  1893335 aagctatcttggagaacttgtgaaaataagctgaaaataacttatgtacatgtcataagttttctcaaacagtct-acaagtgcttat 1893249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 441
Target Start/End: Original strand, 10746667 - 10746718
Alignment:
Q  390 aattaagggcttgttattcaacagtataacatgacttatataccggtgtcaa 441  Q
    |||||| | ||| ||||||||||||||| ||||||||||| |||||||||||    
T  10746667 aattaaagactttttattcaacagtatagcatgacttatacaccggtgtcaa 10746718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 299
Target Start/End: Original strand, 13866962 - 13867029
Alignment:
Q  232 taagttctctataacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaaca 299  Q
    ||||||||||  |||||||||||||||  ||||  || ||| |||||||||||| |||||||||||||    
T  13866962 taagttctctcaaacagtctcacaagtgtttatggcagtagataagctcaaataggtcaatccaaaca 13867029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 28677702 - 28677655
Alignment:
Q  188 gagagcttatataaataagctgaaaacaacttatggaaatgtcataag 235  Q
    ||||||||||  |||||||| |||||||||||||| ||||||||||||    
T  28677702 gagagcttatggaaataagccgaaaacaacttatgaaaatgtcataag 28677655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 155
Target Start/End: Original strand, 37766720 - 37766794
Alignment:
Q  80 gcttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttcatata 155  Q
    |||||||||||||||||||||| ||   ||| ||| ||| |||||| ||||||||||||||| |||||||| ||||    
T  37766720 gcttatcatataagtgcttatgtattagcta-ttcatatgacaaaaaataaaataaagtcaaaatgttttcgtata 37766794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 297
Target Start/End: Original strand, 40158816 - 40158867
Alignment:
Q  246 cagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaa 297  Q
    ||||||||||||||||||| ||| ||| || ||||||||||| |||||||||    
T  40158816 cagtctcacaagttcttatgtcagtagatatgctcaaataagccaatccaaa 40158867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 243 - 297
Target Start/End: Original strand, 10817495 - 10817549
Alignment:
Q  243 taacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaa 297  Q
    ||||| |||||||| | ||||||||||||| | ||| ||||||||||||||||||    
T  10817495 taacaatctcacaactgcttatatcattagattagcccaaataagtcaatccaaa 10817549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 35557179 - 35557121
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataag 235  Q
    |||| ||||| ||||| |||||||||||||| ||||||| |||||| | ||||||||||    
T  35557179 aagcaatcttagagagtttatataaataagcagaaaacagcttatgaacatgtcataag 35557121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 237
Target Start/End: Complemental strand, 1939375 - 1939326
Alignment:
Q  188 gagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    ||||||||||  ||||||| |||||||| |||||||| ||||||||||||    
T  1939375 gagagcttatggaaataagttgaaaacagcttatggacatgtcataagtt 1939326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 293
Target Start/End: Original strand, 5826244 - 5826348
Alignment:
Q  188 gagagcttatataaataagctgaaaacaacttatggaaatgtcataagttctctataacagtctcacaagttcttatatcattagttaagctcaaataag 287  Q
    |||||||||  |||||||||||||||||  ||||| | |||||||||| ||||   |||||| |||||||| |||| | || | || ||| |||||||||    
T  5826244 gagagcttacgtaaataagctgaaaacagtttatgcacatgtcataagctctcgcaaacagtgtcacaagtgcttaaaccagt-gtaaagttcaaataag 5826342  T
Q  288 tcaatc 293  Q
    ||||||    
T  5826343 tcaatc 5826348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 29316828 - 29316771
Alignment:
Q  178 agctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataag 235  Q
    ||||||||| |||| |||||  |||||||||||||| |||||||| | ||||||||||    
T  29316828 agctatcttggagaacttatggaaataagctgaaaagaacttatgaacatgtcataag 29316771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 151
Target Start/End: Complemental strand, 29429904 - 29429835
Alignment:
Q  82 ttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttca 151  Q
    |||||||||||| ||||| | ||| ||||||| | || |||||| |||||||||||||||  ||||||||    
T  29429904 ttatcatataagagcttacgtataaactacttttaatgacaaaagataaaataaagtcaaactgttttca 29429835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 37276840 - 37276897
Alignment:
Q  244 aacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaacagg 301  Q
    ||||||||||||||| ||||||| | ||| ||| || ||||||||| |||||||||||    
T  37276840 aacagtctcacaagtgcttatattagtagataaacttaaataagtcgatccaaacagg 37276897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 308
Target Start/End: Complemental strand, 37419634 - 37419577
Alignment:
Q  251 tcacaagttcttatatcattagttaagctcaaataagtcaatccaaacagggccaaaa 308  Q
    |||||||| ||||||| | ||| ||| |||||||||||||||||||||| | ||||||    
T  37419634 tcacaagtgcttatataagtagataaactcaaataagtcaatccaaacatgcccaaaa 37419577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 237
Target Start/End: Complemental strand, 38077116 - 38077067
Alignment:
Q  188 gagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    ||||||||||| ||||| |||||||||  |||||||||||||| ||||||    
T  38077116 gagagcttatagaaataggctgaaaacctcttatggaaatgtcgtaagtt 38077067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 38078464 - 38078419
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatg 222  Q
    |||||||||| |||||||||| ||||| |||| |||||||||||||    
T  38078464 aagctatcttggagagcttatgtaaatgagctcaaaacaacttatg 38078419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 264
Target Start/End: Complemental strand, 41039667 - 41039634
Alignment:
Q  231 ataagttctctataacagtctcacaagttcttat 264  Q
    ||||||||||||||||||||||||||||| ||||    
T  41039667 ataagttctctataacagtctcacaagtttttat 41039634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 44606141 - 44606104
Alignment:
Q  200 aaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  44606141 aaatcagctgaaaacaacttatggacatgtcataagtt 44606104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 70 - 98
Target Start/End: Original strand, 6561279 - 6561307
Alignment:
Q  70 tagcataagagcttatcatataagtgctt 98  Q
    |||||||||||||||||||||||||||||    
T  6561279 tagcataagagcttatcatataagtgctt 6561307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 7103536 - 7103480
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcata 233  Q
    |||||||||| ||||| || |  ||||||||| ||||||||||||||| ||||||||    
T  7103536 aagctatcttagagagtttgtgaaaataagctaaaaacaacttatggatatgtcata 7103480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 252 - 300
Target Start/End: Original strand, 8017538 - 8017586
Alignment:
Q  252 cacaagttcttatatcattagttaagctcaaataagtcaatccaaacag 300  Q
    ||||||| ||||| ||| ||| ||| |||||||||||||||||||||||    
T  8017538 cacaagtgcttatgtcaatagataacctcaaataagtcaatccaaacag 8017586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 33197387 - 33197320
Alignment:
Q  80 gcttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttt 148  Q
    |||||||||||||||||||||  |||  ||| |||| ||||||||| ||| |||||||||||| |||||    
T  33197387 gcttatcatataagtgcttatctataagctatttct-ataacaaaagatagaataaagtcaagttgttt 33197320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 43529832 - 43529776
Alignment:
Q  244 aacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaacag 300  Q
    |||||| ||| |||| |||||| || ||| ||||||||||||||||||| |||||||    
T  43529832 aacagtgtcagaagtgcttataccaatagataagctcaaataagtcaattcaaacag 43529776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 66; Significance: 7e-29; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 386 - 483
Target Start/End: Complemental strand, 10253 - 10157
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatcaatatccattgtatcctgtttttgatctagatta 483  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||| || ||||||||||    
T  10253 atagaattaaggtcttgttgttcaacagtataacatgacttatatactggtgtcaaccaatattaatat-cattgtatcctgttattcatctagatta 10157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 386 - 449
Target Start/End: Complemental strand, 36175 - 36112
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatc 449  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  36175 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaatcaatatc 36112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 389 - 483
Target Start/End: Original strand, 13902797 - 13902885
Alignment:
Q  389 gaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatcaatatccattgtatcctgtttttgatctagatta 483  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||      |||||||||||||||||| |||| || ||||||||||    
T  13902797 gaattaagggcttgttattcaacagtataacatgacttatataccggtgtca------atcaatatccattgtatcatgttattcatctagatta 13902885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 386 - 483
Target Start/End: Complemental strand, 4414494 - 4414403
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatcaatatccattgtatcctgtttttgatctagatta 483  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||      |||||||||||||||||||| || || ||||||||||    
T  4414494 atagaattaagggcttgttattcaatagtataacatgacttatataccggtgtca------atcaatatccattgtatcctcttattcatctagatta 4414403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 386 - 455
Target Start/End: Original strand, 17865059 - 17865128
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatcaatatc 455  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  17865059 atagaattaaggctttgttattcaacagtataacatgacttatataccagtgtcaaccaatatcaatatc 17865128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 386 - 441
Target Start/End: Complemental strand, 36631525 - 36631470
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaa 441  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  36631525 atagaattaagggcttgttattcaatagtataacatgacttatataccggtgtcaa 36631470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 386 - 483
Target Start/End: Complemental strand, 50961951 - 50961860
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatcaatatccattgtatcctgtttttgatctagatta 483  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||||||||      ||||| |||||||||||| |||| || ||||||||||    
T  50961951 atagaattaagggcttgttattcaatattataacatgacttatataccggtgtca------atcaaaatccattgtatcttgttattcatctagatta 50961860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 388 - 441
Target Start/End: Original strand, 10374855 - 10374908
Alignment:
Q  388 agaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaa 441  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  10374855 agaattaagggcttgttattcaatagtataacataacttatataccggtgtcaa 10374908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 3597255 - 3597198
Alignment:
Q  244 aacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaacagg 301  Q
    |||||||||||||||  |||||||||||| ||| ||||||||||||||||||||||||    
T  3597255 aacagtctcacaagtggttatatcattagataacctcaaataagtcaatccaaacagg 3597198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 16981990 - 16981933
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataa 234  Q
    |||||||| | ||||||||||||||||||||| ||||||||||||||| |||||||||    
T  16981990 aagctatcatggagagcttatataaataagctaaaaacaacttatggacatgtcataa 16981933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 4622189 - 4622245
Alignment:
Q  244 aacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaacag 300  Q
    |||||||| |||||||||||| |||||||||||||| |||||||||||| |||||||    
T  4622189 aacagtctaacaagttcttatgtcattagttaagcttaaataagtcaattcaaacag 4622245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 27963413 - 27963366
Alignment:
Q  188 gagagcttatataaataagctgaaaacaacttatggaaatgtcataag 235  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  27963413 gagagcttatataaataagctaaaaacaacttatggacatgtcataag 27963366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 390 - 449
Target Start/End: Original strand, 31838287 - 31838346
Alignment:
Q  390 aattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatc 449  Q
    ||||||||| ||||||||||||| ||||||| |||||||||| ||||||||| |||||||    
T  31838287 aattaagggattgttattcaacactataacacgacttatatatcggtgtcaatcaatatc 31838346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 27140494 - 27140552
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataag 235  Q
    |||||||| | ||||||||||  ||||||||||||||||||||||||| ||||||||||    
T  27140494 aagctatcatggagagcttatgcaaataagctgaaaacaacttatggacatgtcataag 27140552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 28689506 - 28689448
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataag 235  Q
    |||||||||| || |||||||  ||||||||||||||||||||||||| ||||||||||    
T  28689506 aagctatcttggaaagcttatgaaaataagctgaaaacaacttatggacatgtcataag 28689448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 155
Target Start/End: Original strand, 870962 - 871041
Alignment:
Q  75 taagagcttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttcatata 155  Q
    |||| |||||||||||||||||||||| ||| |||| || ||||||||||| ||||||| |||||||  | ||||||||||    
T  870962 taagcgcttatcatataagtgcttatgtataaacta-tttttataacaaaagataaaattaagtcaattttttttcatata 871041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 43722382 - 43722322
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    ||||||| |||||||||||||| |||||||||||||||||| || | | ||||||||||||    
T  43722382 aagctatatttgagagcttataaaaataagctgaaaacaacataagaacatgtcataagtt 43722322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 46252736 - 46252676
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    |||||||||| ||||||||||  |||||| |||||||||||||||| | ||||||||||||    
T  46252736 aagctatcttggagagcttatgaaaataacctgaaaacaacttatgaacatgtcataagtt 46252676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 386 - 441
Target Start/End: Original strand, 27903721 - 27903776
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaa 441  Q
    |||||||||||||||| |||||||| |||||||||| ||||||||| ||| |||||    
T  27903721 atagaattaagggcttcttattcaatagtataacatcacttatatatcggcgtcaa 27903776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 10199462 - 10199404
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataag 235  Q
    ||||||| || ||||||||||  ||||||||||||||||||||||| | ||||||||||    
T  10199462 aagctattttagagagcttatgaaaataagctgaaaacaacttatgaacatgtcataag 10199404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 441
Target Start/End: Original strand, 48642849 - 48642906
Alignment:
Q  386 atagaattaagggcttgttattcaacag--tataacatgacttatataccggtgtcaa 441  Q
    ||||||||||||||||||||||||| ||  |||||||||||||||||| |||| ||||    
T  48642849 atagaattaagggcttgttattcaatagtatataacatgacttatatatcggtatcaa 48642906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 24460375 - 24460318
Alignment:
Q  244 aacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaacagg 301  Q
    ||||||||||||||| || || ||| ||| |||| |||||||||||||||||||||||    
T  24460375 aacagtctcacaagtgctcatgtcagtagataagttcaaataagtcaatccaaacagg 24460318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 81 - 237
Target Start/End: Complemental strand, 30259634 - 30259480
Alignment:
Q  81 cttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttcatatataagctataagatg-nnnnnnnaag 179  Q
    ||||||||| ||||||||||||| |  ||| |||| |||||||||||||||||||||||||  || |||   |||||||||||||| ||        |||    
T  30259634 cttatcatagaagtgcttatgcacaagctatttct-ataacaaaatataaaataaagtcaaactgcttt--gatataagctataagctgtttgcataaag 30259538  T
Q  180 ctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    ||||| | ||||||||||  ||||||| ||||||||| |||| || ||||| ||||||    
T  30259537 ctatcatggagagcttatggaaataagttgaaaacaatttattgacatgtcgtaagtt 30259480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 116 - 237
Target Start/End: Original strand, 30371105 - 30371224
Alignment:
Q  116 tataacaaaatataaaataaagtcaagatgttttcatatataagctataagatgnnnnnnnaagctatctttgagagcttatataaataagctgaaaaca 215  Q
    |||||||||| |||||||||| ||||  ||||||||||||  ||||||||| ||       |||  || || |||||| |||  ||||||||||||||||    
T  30371105 tataacaaaagataaaataaactcaaattgttttcatata--agctataagttgttttcataagacattttggagagcgtattgaaataagctgaaaaca 30371202  T
Q  216 acttatggaaatgtcataagtt 237  Q
    ||||||||| ||||||| ||||    
T  30371203 acttatggacatgtcattagtt 30371224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 4200185 - 4200225
Alignment:
Q  115 ttataacaaaatataaaataaagtcaagatgttttcatata 155  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  4200185 ttataacaaaagataaaataaagtcaagttgttttcatata 4200225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 8016276 - 8016336
Alignment:
Q  180 ctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagttctc 240  Q
    ||||||| |||||||||   ||||||||||||||||| ||||| | |||||||||||||||    
T  8016276 ctatcttggagagcttaggaaaataagctgaaaacaagttatgaacatgtcataagttctc 8016336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 12564473 - 12564417
Alignment:
Q  244 aacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaacag 300  Q
    ||||||| ||||||| ||||||||| ||  ||||||||||||||||||| |||||||    
T  12564473 aacagtcacacaagtgcttatatcagtatataagctcaaataagtcaattcaaacag 12564417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 248 - 300
Target Start/End: Original strand, 33976278 - 33976330
Alignment:
Q  248 gtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaacag 300  Q
    ||||||||||| || || ||||||  |||||||||||||||||||||||||||    
T  33976278 gtctcacaagtgctgatgtcattaaataagctcaaataagtcaatccaaacag 33976330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 237
Target Start/End: Complemental strand, 38867946 - 38867825
Alignment:
Q  116 tataacaaaatataaaataaagtcaagatgttttcatatataagctataagatgnnnnnnnaagctatctttgagagcttatataaataagctgaaaaca 215  Q
    |||| ||||| || |||||||||||| ||||||||||||||||||| |||  ||       ||| ||||||  ||| |||||  ||||||||| ||||||    
T  38867946 tataccaaaagattaaataaagtcaaaatgttttcatatataagctttaaactgttttcataagttatcttgaagaacttatgaaaataagctaaaaaca 38867847  T
Q  216 acttatggaaatgtcataagtt 237  Q
    ||| ||||| || |||||||||    
T  38867846 actgatggacatatcataagtt 38867825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 229 - 293
Target Start/End: Complemental strand, 49692041 - 49691978
Alignment:
Q  229 tcataagttctctataacagtctcacaagttcttatatcattagttaagctcaaataagtcaatc 293  Q
    |||||||||||||  |||||||||||||||||||||  |||||| |||| |||||||| ||||||    
T  49692041 tcataagttctctcaaacagtctcacaagttcttat-gcattagataagttcaaataaatcaatc 49691978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 229 - 297
Target Start/End: Complemental strand, 51929451 - 51929383
Alignment:
Q  229 tcataagttctctataacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaa 297  Q
    |||||||||||||  |||||| ||||| || ||||| ||| ||| |||||||||| |||||||||||||    
T  51929451 tcataagttctcttaaacagtgtcacaggtgcttatgtcagtagataagctcaaaaaagtcaatccaaa 51929383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 6292588 - 6292643
Alignment:
Q  244 aacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaaca 299  Q
    |||| ||||| |||| ||||| ||| ||| ||||||||||||||||||||||||||    
T  6292588 aacaatctcaaaagtgcttatgtcagtagataagctcaaataagtcaatccaaaca 6292643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 153
Target Start/End: Complemental strand, 7274097 - 7274015
Alignment:
Q  70 tagcataagagcttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttcata 153  Q
    ||||||||| ||||||||||||| |||||||| |||   || || ||||||||||| || ||||||||||||  ||||||||||    
T  7274097 tagcataagtgcttatcatataaatgcttatgtatatgtta-tttttataacaaaagatgaaataaagtcaaattgttttcata 7274015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 200 - 235
Target Start/End: Complemental strand, 12477318 - 12477283
Alignment:
Q  200 aaataagctgaaaacaacttatggaaatgtcataag 235  Q
    ||||||||||||||||||||||||| ||||||||||    
T  12477318 aaataagctgaaaacaacttatggacatgtcataag 12477283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 21002251 - 21002306
Alignment:
Q  244 aacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaaca 299  Q
    |||||||||||||||||||||   | ||| |||||||||||||| |||||||||||    
T  21002251 aacagtctcacaagttcttatgcaagtagataagctcaaataagccaatccaaaca 21002306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 24417706 - 24417655
Alignment:
Q  247 agtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaac 298  Q
    |||||||||||| ||||||| | ||| ||| |||||||||||||||||||||    
T  24417706 agtctcacaagtacttatattaatagataaactcaaataagtcaatccaaac 24417655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 234
Target Start/End: Original strand, 34380475 - 34380518
Alignment:
Q  191 agcttatataaataagctgaaaacaacttatggaaatgtcataa 234  Q
    |||||||  |||||||||||||||| ||||||||||||||||||    
T  34380475 agcttattgaaataagctgaaaacagcttatggaaatgtcataa 34380518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 449
Target Start/End: Original strand, 40246936 - 40246999
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatc 449  Q
    ||||||||||| | |||| ||||||| ||||||||||| ||||||||| |||| || |||||||    
T  40246936 atagaattaagtgtttgtcattcaaccgtataacatgatttatataccagtgttaatcaatatc 40246999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 4868430 - 4868476
Alignment:
Q  191 agcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    ||||||| |||||||| |||||||||||||| || ||||||||||||    
T  4868430 agcttatgtaaataagttgaaaacaacttattgacatgtcataagtt 4868476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 208 - 258
Target Start/End: Original strand, 5276340 - 5276390
Alignment:
Q  208 tgaaaacaacttatggaaatgtcataagttctctataacagtctcacaagt 258  Q
    ||||||||||||||| | |||||||||||||||   |||||||||||||||    
T  5276340 tgaaaacaacttatgaacatgtcataagttctcataaacagtctcacaagt 5276390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 7137052 - 7136994
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataag 235  Q
    |||||||||| |||| |||||  |||||||||||||| |||||||| | ||||||||||    
T  7137052 aagctatcttggagaacttatgaaaataagctgaaaataacttatgaatatgtcataag 7136994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 12564553 - 12564495
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataag 235  Q
    |||||||||| |||| |||||  |||||||||||||||||||||| ||  |||||||||    
T  12564553 aagctatcttggagaacttatggaaataagctgaaaacaacttattgacttgtcataag 12564495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 81 - 115
Target Start/End: Original strand, 15784764 - 15784798
Alignment:
Q  81 cttatcatataagtgcttatgcatacactacttct 115  Q
    |||||| ||||||||||||||||||||||||||||    
T  15784764 cttatcgtataagtgcttatgcatacactacttct 15784798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 24460461 - 24460403
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataag 235  Q
    |||||||| ||||||||||| | |||||||||| ||||| |||||| | ||||||||||    
T  24460461 aagctatccttgagagcttacaaaaataagctggaaacagcttatgaacatgtcataag 24460403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 244 - 290
Target Start/End: Original strand, 28075800 - 28075846
Alignment:
Q  244 aacagtctcacaagttcttatatcattagttaagctcaaataagtca 290  Q
    ||||| ||||||||||||||||| | ||| |||||||||||||||||    
T  28075800 aacagcctcacaagttcttatattagtagataagctcaaataagtca 28075846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 34290252 - 34290310
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataag 235  Q
    ||||||||||  ||| |||||  ||||||||||||||||||||||| | ||||||||||    
T  34290252 aagctatcttgaagaacttatgaaaataagctgaaaacaacttatgaatatgtcataag 34290310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 237
Target Start/End: Complemental strand, 4699658 - 4699609
Alignment:
Q  188 gagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    ||||||||||| ||||||||| |||||| |||||| | ||||||||||||    
T  4699658 gagagcttatagaaataagctaaaaacagcttatgaacatgtcataagtt 4699609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 165
Target Start/End: Complemental strand, 12519083 - 12519034
Alignment:
Q  116 tataacaaaatataaaataaagtcaagatgttttcatatataagctataa 165  Q
    ||||||||  ||||||||||||||||  ||||||||| ||||||||||||    
T  12519083 tataacaatgtataaaataaagtcaaattgttttcatgtataagctataa 12519034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 237
Target Start/End: Original strand, 15579521 - 15579558
Alignment:
Q  200 aaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    ||||||||||| ||||||||||||| ||||||||||||    
T  15579521 aaataagctgagaacaacttatggacatgtcataagtt 15579558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 23373287 - 23373230
Alignment:
Q  244 aacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaacagg 301  Q
    |||| |||||||||| ||||||||| |||  ||| |||||||||||||| ||||||||    
T  23373287 aacaatctcacaagtgcttatatcagtagacaagttcaaataagtcaattcaaacagg 23373230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 23902121 - 23902076
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatg 222  Q
    |||||||||| ||||||||||  || ||||||||||||||||||||    
T  23902121 aagctatcttagagagcttatggaagtaagctgaaaacaacttatg 23902076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 25479597 - 25479654
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataa 234  Q
    |||||||| | ||||||||||  ||||||||||||||||||| ||| | |||||||||    
T  25479597 aagctatcctagagagcttatgaaaataagctgaaaacaactaatgaacatgtcataa 25479654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 28077123 - 28077078
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatg 222  Q
    ||||||| || ||||||||||  |||||||||||||||||||||||    
T  28077123 aagctattttagagagcttattgaaataagctgaaaacaacttatg 28077078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 50319249 - 50319286
Alignment:
Q  116 tataacaaaatataaaataaagtcaagatgttttcata 153  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  50319249 tataacaaaagataaaataaagtcaagttgttttcata 50319286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 601019 - 601058
Alignment:
Q  116 tataacaaaatataaaataaagtcaagatgttttcatatat 156  Q
    |||||||||| |||||||||||||||| |||||||||||||    
T  601019 tataacaaaa-ataaaataaagtcaagttgttttcatatat 601058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 3224462 - 3224498
Alignment:
Q  200 aaataagctgaaaacaacttatggaaatgtcataagt 236  Q
    ||||||||||| ||||||||||||| |||||||||||    
T  3224462 aaataagctgagaacaacttatggacatgtcataagt 3224498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 300
Target Start/End: Complemental strand, 3887590 - 3887550
Alignment:
Q  260 cttatatcattagttaagctcaaataagtcaatccaaacag 300  Q
    |||||| || |||| ||||||||||||||||||||||||||    
T  3887590 cttataccaatagtaaagctcaaataagtcaatccaaacag 3887550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 200 - 240
Target Start/End: Original strand, 5082872 - 5082912
Alignment:
Q  200 aaataagctgaaaacaacttatggaaatgtcataagttctc 240  Q
    |||||||||||||| |||||||||| |||||||||| ||||    
T  5082872 aaataagctgaaaataacttatggatatgtcataagatctc 5082912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 6279415 - 6279467
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgt 229  Q
    |||||||| | ||||||||||  ||||| ||||||||||||||||||| ||||    
T  6279415 aagctatcctagagagcttatggaaatacgctgaaaacaacttatggacatgt 6279467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 188 - 224
Target Start/End: Original strand, 6659541 - 6659577
Alignment:
Q  188 gagagcttatataaataagctgaaaacaacttatgga 224  Q
    ||||||||||  |||||||||||||||||||||||||    
T  6659541 gagagcttatcgaaataagctgaaaacaacttatgga 6659577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 32515495 - 32515439
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcata 233  Q
    |||||||| | ||||||||||| | ||||| |||||||||||||| || ||||||||    
T  32515495 aagctatcatggagagcttatagatataagttgaaaacaacttattgacatgtcata 32515439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 189 - 237
Target Start/End: Complemental strand, 37593726 - 37593678
Alignment:
Q  189 agagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    |||||||||  |||||||||||||||| |||||| | ||||||||||||    
T  37593726 agagcttatgaaaataagctgaaaacagcttatgaacatgtcataagtt 37593678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 178 - 222
Target Start/End: Complemental strand, 38503518 - 38503474
Alignment:
Q  178 agctatctttgagagcttatataaataagctgaaaacaacttatg 222  Q
    ||||||||| |||| |||||  |||||||||||||||||||||||    
T  38503518 agctatcttggagaacttatgaaaataagctgaaaacaacttatg 38503474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 2e-23; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 386 - 466
Target Start/End: Complemental strand, 996503 - 996423
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatcaatatccattgtatcct 466  Q
    ||||||||||||  |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||    
T  996503 atagaattaaggctttgttattaaacagtataacatgacttatataccagtgtcaaccaatatcaatatcaattatatcct 996423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 386 - 483
Target Start/End: Original strand, 17140488 - 17140583
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatcaatatccattgtatcctgtttttgatctagatta 483  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||    ||  |||||||||||||||||| |||| || ||||||||||    
T  17140488 atagaattaagggcttgttattcaatagtataacatgacttatataccggtgtgtgtca--atcaatatccattgtatcttgttattcatctagatta 17140583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 386 - 483
Target Start/End: Complemental strand, 25385964 - 25385873
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatcaatatccattgtatcctgtttttgatctagatta 483  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||      || |||||||||||||||||||| || ||||||||||    
T  25385964 atagaattaagggcttgttattcaacaatataacatgacttatatatcggtgtca------ataaatatccattgtatcctgttattcatctagatta 25385873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 388 - 483
Target Start/End: Original strand, 19635221 - 19635310
Alignment:
Q  388 agaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatcaatatccattgtatcctgtttttgatctagatta 483  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||      ||||| |||||||||||| |||| || ||||||||||    
T  19635221 agaattaagggcttgttattcaatagtataacatgacttatataccggtgtca------atcaaaatccattgtatcttgttattcatctagatta 19635310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 386 - 449
Target Start/End: Original strand, 28744498 - 28744561
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatc 449  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  28744498 atagaattaagggtttgttattcaatagtataacatgacttatataccggtgtcaatcaatatc 28744561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 116 - 237
Target Start/End: Complemental strand, 281961 - 281842
Alignment:
Q  116 tataacaaaatataaaataaagtcaagatgttttcatatataagctataagatgnnnnnnnaagctatctttgagagcttatataaataagctgaaaaca 215  Q
    |||||||||| |||||||||||||||  ||||||||||||  ||||||||| ||       |||||||| | ||||||| ||  ||||||||||||||||    
T  281961 tataacaaaagataaaataaagtcaacttgttttcatata--agctataagctgtgttcataagctatcctagagagctcatggaaataagctgaaaaca 281864  T
Q  216 acttatggaaatgtcataagtt 237  Q
    |||||| || ||||||||||||    
T  281863 acttatagacatgtcataagtt 281842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 388 - 441
Target Start/End: Complemental strand, 2404317 - 2404264
Alignment:
Q  388 agaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaa 441  Q
    ||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||    
T  2404317 agaattaagggtttgttatccaatagtataacatgacttatataccggtgtcaa 2404264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 75 - 153
Target Start/End: Original strand, 13360652 - 13360729
Alignment:
Q  75 taagagcttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttcata 153  Q
    |||| ||||||||||||||||||||||   | |||| |||| ||||||||||||||||||||||||||  |||||||||    
T  13360652 taagcgcttatcatataagtgcttatgtgcaaactatttct-ataacaaaatataaaataaagtcaagcagttttcata 13360729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 115 - 235
Target Start/End: Complemental strand, 2027520 - 2027402
Alignment:
Q  115 ttataacaaaatataaaataaagtcaagatgttttcatatataagctataagatgnnnnnnnaagctatctttgagagcttatataaataagctgaaaac 214  Q
    ||||||||||| |||||||||||||||  | ||||||||||  | ||||||| ||       |||||| | |  |||| ||| |||||||||||||||||    
T  2027520 ttataacaaaagataaaataaagtcaaactattttcatata--acctataagctgttctcataagctagcatgtagagtttaaataaataagctgaaaac 2027423  T
Q  215 aacttatggaaatgtcataag 235  Q
    | |||||||||||||||||||    
T  2027422 agcttatggaaatgtcataag 2027402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 237
Target Start/End: Original strand, 4006645 - 4006790
Alignment:
Q  89 ataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttcatatataagctataagatgnnnnnnnaagctatctttg 188  Q
    |||||||||||||||||   || |||| ||||||||  |||||||||||||||  ||||||  ||||||||||||||| ||       ||||||||  ||    
T  4006645 ataagtgcttatgcataagatatttct-ataacaaatgataaaataaagtcaaattgtttt--tatataagctataagttgttttcataagctatccctg 4006741  T
Q  189 agagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    |||| ||||  |||||||||||||| |||||||||| || || ||||||    
T  4006742 agaggttatgaaaataagctgaaaataacttatggacatatcgtaagtt 4006790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 155
Target Start/End: Original strand, 7713950 - 7714021
Alignment:
Q  83 tatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttcatata 155  Q
    ||||||||||| ||||||| ||| ||||||| | ||||||||| |||||||||||||||  ||||||||||||    
T  7713950 tatcatataagagcttatgtataaactactt-tcataacaaaagataaaataaagtcaaattgttttcatata 7714021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 9027606 - 9027654
Alignment:
Q  189 agagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    |||||||||  ||||||||||||||||||||||||| ||||||||||||    
T  9027606 agagcttatgaaaataagctgaaaacaacttatggacatgtcataagtt 9027654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 10616595 - 10616535
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    ||||||| || ||||||||||| |||||||||||| |||||||| ||| ||||||||||||    
T  10616595 aagctattttggagagcttataaaaataagctgaacacaacttacggacatgtcataagtt 10616535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 6536975 - 6537026
Alignment:
Q  189 agagcttatataaataagctgaaaacaacttatggaaatgtcataagttctc 240  Q
    |||||||||  ||||||||||||||||||||||| | |||||||||||||||    
T  6536975 agagcttatggaaataagctgaaaacaacttatgaacatgtcataagttctc 6537026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 158
Target Start/End: Original strand, 24774681 - 24774758
Alignment:
Q  81 cttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatg-ttttcatatataa 158  Q
    |||||||| |||||||||||  ||| |||| |||| |||||||||||||||||||||||||  || |||||||||||||    
T  24774681 cttatcatgtaagtgcttatatataaactatttct-ataacaaaatataaaataaagtcaaactgtttttcatatataa 24774758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 189 - 301
Target Start/End: Original strand, 821453 - 821566
Alignment:
Q  189 agagcttatataaataagctgaaaacaacttatggaaatgtcataagttc-tctataacagtctcacaagttcttatatcattagttaagctcaaataag 287  Q
    |||| ||||| ||||||||||||||| ||||||| | |||||||||| ||  | |||||| ||||||| || ||||| ||| |   ||| |||||| |||    
T  821453 agaggttatagaaataagctgaaaacgacttatgaacatgtcataagctcacccataacaatctcacaggtgcttatgtcagttcataaactcaaacaag 821552  T
Q  288 tcaatccaaacagg 301  Q
    ||||||||||||||    
T  821553 tcaatccaaacagg 821566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 3528822 - 3528879
Alignment:
Q  180 ctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    ||||||| ||||||||||  ||||||| ||||||||| ||||||| ||||||||||||    
T  3528822 ctatcttggagagcttatgaaaataagatgaaaacaagttatggacatgtcataagtt 3528879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 4420659 - 4420716
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataa 234  Q
    |||||||||| ||||||||||  |||||||||||||||| |||||| | |||||||||    
T  4420659 aagctatcttggagagcttatggaaataagctgaaaacagcttatgaacatgtcataa 4420716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 191 - 300
Target Start/End: Original strand, 27894076 - 27894185
Alignment:
Q  191 agcttatataaataagctgaaaacaacttatggaaatgtcataagttctctataacagtctcacaagttcttatatcattagttaagctcaaataagtca 290  Q
    |||||||  ||||||||||||||||  ||||||| || ||||||| ||  |  ||||||||||||||| ||||| ||  ||| ||||||||||| ||  |    
T  27894076 agcttatgaaaataagctgaaaacagtttatggacatatcataagctcgttcaaacagtctcacaagtacttatgtccgtaggtaagctcaaatgagcta 27894175  T
Q  291 atccaaacag 300  Q
    ||||||||||    
T  27894176 atccaaacag 27894185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 27909681 - 27909636
Alignment:
Q  188 gagagcttatataaataagctgaaaacaacttatggaaatgtcata 233  Q
    ||||||||||  ||||||||||||||||||||||||| ||||||||    
T  27909681 gagagcttatggaaataagctgaaaacaacttatggacatgtcata 27909636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 155
Target Start/End: Complemental strand, 3204687 - 3204616
Alignment:
Q  83 tatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttcatata 155  Q
    ||||||||||||||||| | ||| |||||||| ||||| |||| ||||||||||||| |  ||||||||||||    
T  3204687 tatcatataagtgcttacgaataaactacttc-tataataaaagataaaataaagtcgaactgttttcatata 3204616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 7785796 - 7785740
Alignment:
Q  179 gctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataag 235  Q
    ||||| || ||||||||||  |||||||||||||||||||||| || ||||||||||    
T  7785796 gctattttggagagcttatggaaataagctgaaaacaacttatagacatgtcataag 7785740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 141
Target Start/End: Original strand, 21919981 - 21920056
Alignment:
Q  65 gcttgtagcataagagcttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaa 141  Q
    |||| |||||||||  ||||||||||||||||||||||||| || | || || |||||||||| |||||||| ||||    
T  21919981 gcttatagcataagtacttatcatataagtgcttatgcataaac-attttttgtaacaaaatagaaaataaattcaa 21920056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 30863274 - 30863322
Alignment:
Q  189 agagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    |||||||||| || |||||||||||||||||||| | ||||||||||||    
T  30863274 agagcttatagaagtaagctgaaaacaacttatgtacatgtcataagtt 30863322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 229 - 301
Target Start/End: Complemental strand, 32171372 - 32171300
Alignment:
Q  229 tcataagttctctataacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaacagg 301  Q
    ||||||| |||||  ||||||||| ||||| ||||| ||| || ||||||| ||||||| |||||||||||||    
T  32171372 tcataagctctctcaaacagtctcgcaagtgcttatgtcaatacttaagctgaaataagacaatccaaacagg 32171300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 200 - 235
Target Start/End: Complemental strand, 2034477 - 2034442
Alignment:
Q  200 aaataagctgaaaacaacttatggaaatgtcataag 235  Q
    |||||||||||||||| |||||||||||||||||||    
T  2034477 aaataagctgaaaacagcttatggaaatgtcataag 2034442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 29249489 - 29249544
Alignment:
Q  244 aacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaaca 299  Q
    |||||||| |||||| |||||| || ||  ||||||||||||||||||||||||||    
T  29249489 aacagtcttacaagtacttataacagtaaataagctcaaataagtcaatccaaaca 29249544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 301
Target Start/End: Original strand, 3153588 - 3153642
Alignment:
Q  247 agtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaacagg 301  Q
    |||||||||||| ||||||||  ||| ||| ||||||||||||||| ||||||||    
T  3153588 agtctcacaagtacttatatctatagataaactcaaataagtcaatgcaaacagg 3153642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 229 - 299
Target Start/End: Original strand, 33089587 - 33089657
Alignment:
Q  229 tcataagttctctataacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaaca 299  Q
    |||||||||||||  || |||||||||| | | ||| ||| ||| |||||||||||||||||| |||||||    
T  33089587 tcataagttctctgaaatagtctcacaaatacatatgtcagtagataagctcaaataagtcaacccaaaca 33089657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 34939760 - 34939818
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataag 235  Q
    |||||||| | ||||| ||||  ||||||||||||||||| ||||||| ||||||||||    
T  34939760 aagctatcctggagagtttatggaaataagctgaaaacaatttatggacatgtcataag 34939818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 2112219 - 2112276
Alignment:
Q  180 ctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    ||||||| ||| ||||||| |||||| | |||||||||||||| | ||||||||||||    
T  2112219 ctatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagtt 2112276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 155
Target Start/End: Complemental strand, 7351766 - 7351682
Alignment:
Q  70 tagcataagagcttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttcatata 155  Q
    |||||||||  |||||||||||| |||||||| ||| |||| ||  ||||| ||| ||||||||||||| ||  ||||||||||||    
T  7351766 tagcataagctcttatcatataaatgcttatgtataaacta-tttatataataaactataaaataaagttaaactgttttcatata 7351682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 8420172 - 8420115
Alignment:
Q  243 taacagtctcacaagttcttatatcattagttaagctcaaat-aagtcaatccaaaca 299  Q
    ||||||||||||||||  |||| ||| ||| ||||||||||| |||||||||||||||    
T  8420172 taacagtctcacaagtgtttatgtcaatagataagctcaaataaagtcaatccaaaca 8420115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 237
Target Start/End: Complemental strand, 9668028 - 9667979
Alignment:
Q  188 gagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    ||||||||||  ||||||| |||||||| |||||||| ||||||||||||    
T  9668028 gagagcttatggaaataagttgaaaacagcttatggacatgtcataagtt 9667979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 155
Target Start/End: Complemental strand, 10452518 - 10452434
Alignment:
Q  70 tagcataagagcttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttcatata 155  Q
    ||||||||| |  |||||||| |||||||||| |||  ||| |||| |||||||||||||||||||| ||||  | ||||||||||    
T  10452518 tagcataagtggctatcatatcagtgcttatgtataagctatttct-ataacaaaatataaaataaaatcaaactattttcatata 10452434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 296
Target Start/End: Original strand, 30533894 - 30533939
Alignment:
Q  251 tcacaagttcttatatcattagttaagctcaaataagtcaatccaa 296  Q
    |||||||| ||||||||| ||| ||||||| |||||||||||||||    
T  30533894 tcacaagtacttatatcagtagataagctcgaataagtcaatccaa 30533939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 299
Target Start/End: Complemental strand, 31776228 - 31776191
Alignment:
Q  262 tatatcattagttaagctcaaataagtcaatccaaaca 299  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  31776228 tatatcagtagataagctcaaataagtcaatccaaaca 31776191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 299
Target Start/End: Original strand, 33284340 - 33284393
Alignment:
Q  246 cagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaaca 299  Q
    ||||||| ||||||||||| |  |||| |||||||||||||| |||||||||||    
T  33284340 cagtctctcaagttcttatgttgttaggtaagctcaaataagccaatccaaaca 33284393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 281822 - 281766
Alignment:
Q  244 aacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaacag 300  Q
    ||||||||||||||| ||||| ||| ||  ||| ||||| |||||||||||||||||    
T  281822 aacagtctcacaagtacttatgtcactacataatctcaagtaagtcaatccaaacag 281766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 193 - 237
Target Start/End: Complemental strand, 733215 - 733171
Alignment:
Q  193 cttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    |||||| ||||| |||||||||||||| |||| ||||||||||||    
T  733215 cttatagaaatatgctgaaaacaacttgtggacatgtcataagtt 733171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 237
Target Start/End: Original strand, 10031748 - 10031808
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    ||||| |||| |||||||||   ||||||| ||||||||||||||||| ||||| ||||||    
T  10031748 aagctgtcttggagagcttaaggaaataagatgaaaacaacttatggatatgtcgtaagtt 10031808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 24745439 - 24745495
Alignment:
Q  181 tatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    |||||| |||||||| || |||||||| |||||||||||||| |  |||||||||||    
T  24745439 tatcttagagagcttgtaaaaataagccgaaaacaacttatgaaggtgtcataagtt 24745495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 1e-20; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 386 - 484
Target Start/End: Complemental strand, 35321816 - 35321724
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatcaatatccattgtatcctgtttttgatctagattaa 484  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| ||||||||      |||||||||||||||||||| || || |||||||||||    
T  35321816 atagaattaagggcttgttattcagcagtataacatgacttctatatcggtgtca------atcaatatccattgtatcctattattcatctagattaa 35321724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 386 - 448
Target Start/End: Original strand, 27408113 - 27408175
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatat 448  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  27408113 atagaattaaaggctttttattcaacagtataacatgacttatataccggtgtcaatcaatat 27408175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 70 - 233
Target Start/End: Complemental strand, 28769497 - 28769337
Alignment:
Q  70 tagcataagagcttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttcatatataagctataagatg 169  Q
    ||||||||| ||||||||||||| |||||||| |||  ||| ||| ||||||||| |||||||| |||||||  | |||||   ||||||||||||| ||    
T  28769497 tagcataagtgcttatcatataaatgcttatgtataagcta-ttcctataacaaactataaaattaagtcaaactattttc--ttataagctataagctg 28769401  T
Q  170 nnnnnnnaagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcata 233  Q
           ||||||| || ||||| ||||  ||||||||||||||||||||||||| || |||||    
T  28769400 ttttcataagctattttggagagtttatggaaataagctgaaaacaacttatggacatatcata 28769337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 390 - 483
Target Start/End: Complemental strand, 43324317 - 43324230
Alignment:
Q  390 aattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatcaatatccattgtatcctgtttttgatctagatta 483  Q
    ||||||||| || |||||||| |||||||||||||||||||||||||||||      ||||| |||||||||||| |||| || ||||||||||    
T  43324317 aattaagggtttcttattcaatagtataacatgacttatataccggtgtca------atcaaaatccattgtatcttgttattcatctagatta 43324230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 70 - 141
Target Start/End: Original strand, 14482114 - 14482184
Alignment:
Q  70 tagcataagagcttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaa 141  Q
    |||||| || |||||||||||||||||||||| ||| |||| ||| |||||||||| |||||||||||||||    
T  14482114 tagcattagtgcttatcatataagtgcttatgtataaactatttc-tataacaaaagataaaataaagtcaa 14482184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 390 - 449
Target Start/End: Complemental strand, 30680862 - 30680803
Alignment:
Q  390 aattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatc 449  Q
    ||||||||| | |||||||||||||||||||||||||||| ||||||||||  |||||||    
T  30680862 aattaagggttcgttattcaacagtataacatgacttatacaccggtgtcattcaatatc 30680803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 82 - 155
Target Start/End: Original strand, 7026655 - 7026727
Alignment:
Q  82 ttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttcatata 155  Q
    ||||||||||||||||||||||||  |||||  ||||||||||| |||||||||||| ||  ||||||||||||    
T  7026655 ttatcatataagtgcttatgcataagctactg-ttataacaaaagataaaataaagtaaaattgttttcatata 7026727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 42215136 - 42215091
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatg 222  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||    
T  42215136 aagctatcttggagagcttatgtaaataagctgaaaacaacttatg 42215091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 435
Target Start/End: Complemental strand, 37124884 - 37124836
Alignment:
Q  388 agaattaagggcttgttattcaaca-gtataacatgacttatataccgg 435  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  37124884 agaattaagggcttgttattcaacacgtataacatgacttatacaccgg 37124836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 70 - 141
Target Start/End: Complemental strand, 39392819 - 39392749
Alignment:
Q  70 tagcataagagcttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaa 141  Q
    ||||||||| ||||||||||||||||  |||| ||| |||| |||| ||||||||| |||||||||||||||    
T  39392819 tagcataagtgcttatcatataagtggctatgtataaactatttct-ataacaaaagataaaataaagtcaa 39392749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 25869318 - 25869260
Alignment:
Q  179 gctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    |||||| | ||||| ||||  ||||||||||||||||||||||||| ||||||||||||    
T  25869318 gctatcatggagagtttatggaaataagctgaaaacaacttatggacatgtcataagtt 25869260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 298
Target Start/End: Original strand, 4560604 - 4560652
Alignment:
Q  250 ctcacaagttcttatatcattagttaagctcaaataagtcaatccaaac 298  Q
    ||||||||| ||||| ||| ||| |||||||||||||||||||||||||    
T  4560604 ctcacaagtgcttatgtcaatagataagctcaaataagtcaatccaaac 4560652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 14949894 - 14949942
Alignment:
Q  189 agagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    |||| ||||| |||||||||||||||| |||||||| ||||||||||||    
T  14949894 agagattatagaaataagctgaaaacagcttatggacatgtcataagtt 14949942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 237
Target Start/End: Original strand, 38421280 - 38421340
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    ||||||||||  ||| ||| | ||| |||||||||||||||||||||| ||||||||||||    
T  38421280 aagctatcttgaagatcttgtgtaagtaagctgaaaacaacttatggacatgtcataagtt 38421340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 7714338 - 7714393
Alignment:
Q  244 aacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaaca 299  Q
    |||||||||||||||  ||||  |||||  ||||||||||||||||||||||||||    
T  7714338 aacagtctcacaagtgtttatgacattatataagctcaaataagtcaatccaaaca 7714393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 200 - 299
Target Start/End: Complemental strand, 14927000 - 14926901
Alignment:
Q  200 aaataagctgaaaacaacttatggaaatgtcataagttctctataacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaaca 299  Q
    |||| ||||||||||| ||||  || | |||| ||| |||||  ||||||||||||||| |||||  || ||  |||| |||||||||||||||||||||    
T  14927000 aaattagctgaaaacagcttacagacacgtcacaagctctctcaaacagtctcacaagtgcttatgccagtaaataagttcaaataagtcaatccaaaca 14926901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 229 - 299
Target Start/End: Complemental strand, 2487997 - 2487927
Alignment:
Q  229 tcataagttctctataacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaaca 299  Q
    ||||||||||||   ||||||||||||||| ||||| ||| ||| | | |||||||||| |||||||||||    
T  2487997 tcataagttctcccaaacagtctcacaagtgcttatgtcagtagatgaactcaaataagccaatccaaaca 2487927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 297
Target Start/End: Original strand, 12361293 - 12361343
Alignment:
Q  247 agtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaa 297  Q
    ||||| |||||| ||||||||| ||| |||| |||||||||||||||||||    
T  12361293 agtctaacaagtacttatatcagtagataagttcaaataagtcaatccaaa 12361343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 13000464 - 13000418
Alignment:
Q  191 agcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    |||||||  |||||||||||||||||||| |||| ||||||||||||    
T  13000464 agcttatggaaataagctgaaaacaacttgtggacatgtcataagtt 13000418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 20672766 - 20672824
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataag 235  Q
    |||||||| | ||||||||||  |||||||||||||||| |||||| | ||||||||||    
T  20672766 aagctatcctggagagcttatgaaaataagctgaaaacagcttatgaacatgtcataag 20672824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 183 - 237
Target Start/End: Original strand, 30918135 - 30918188
Alignment:
Q  183 tctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    |||| ||||||||||  |||||||||||||||||||||| ||||||||| |||||    
T  30918135 tcttggagagcttatggaaataagctgaaaacaacttat-gaaatgtcacaagtt 30918188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 37353303 - 37353245
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataag 235  Q
    |||||||||||||||||||||  |||||| |||||||||  ||||| | ||||||||||    
T  37353303 aagctatctttgagagcttatgaaaataatctgaaaacagtttatgaatatgtcataag 37353245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 10062195 - 10062138
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataa 234  Q
    |||||||| ||| ||| ||||  |||||||||||||||| ||||| ||||||||||||    
T  10062195 aagctatccttgtgagtttatgcaaataagctgaaaacagcttatagaaatgtcataa 10062138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 11813159 - 11813102
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataa 234  Q
    ||||||||||  |||||||| | |||||||||||||||| | |||||| |||||||||    
T  11813159 aagctatcttcaagagcttacagaaataagctgaaaacagcctatggatatgtcataa 11813102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 264
Target Start/End: Original strand, 12833397 - 12833476
Alignment:
Q  188 gagagcttatataaataagctga---aaacaacttatggaaatgtcataagttctctataacagtctcacaagttcttat 264  Q
    ||||||||||| ||||||||||    ||||| |||||| | |||||||| |||||||  ||||||||||||||| |||||    
T  12833397 gagagcttatagaaataagctgttgtaaacagcttatgaacatgtcatatgttctctcaaacagtctcacaagtgcttat 12833476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 33714290 - 33714245
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatg 222  Q
    |||||||||  ||||||||||| |||||||||||||||| ||||||    
T  33714290 aagctatctgggagagcttataaaaataagctgaaaacagcttatg 33714245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 301
Target Start/End: Original strand, 38602439 - 38602480
Alignment:
Q  260 cttatatcattagttaagctcaaataagtcaatccaaacagg 301  Q
    ||||| ||| ||| ||||||||||||||||||||||||||||    
T  38602439 cttatgtcagtagataagctcaaataagtcaatccaaacagg 38602480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 41933400 - 41933340
Alignment:
Q  38 tgtttggataatcagtttaagtaaagggcttgtagcataagagcttatcatataagtgctta 99  Q
    ||||||||||| |||||||| ||||| | || |||||| | |||||||||||||||||||||    
T  41933400 tgtttggataaacagtttaa-taaagcgtttatagcatcatagcttatcatataagtgctta 41933340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 200 - 300
Target Start/End: Original strand, 1664421 - 1664521
Alignment:
Q  200 aaataagctgaaaacaacttatggaaatgtcataagttctctataacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaaca 299  Q
    |||||| || ||||||||| ||||| |||||||||| ||||   |||||||||||||||  ||||   | ||| ||| |||||||||||| ||| |||||    
T  1664421 aaataaactcaaaacaactaatggacatgtcataagctctcccaaacagtctcacaagtgtttatgctagtagataaactcaaataagtccatctaaaca 1664520  T
Q  300 g 300  Q
    |    
T  1664521 g 1664521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 2091791 - 2091839
Alignment:
Q  189 agagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    ||||| |||| ||||||| ||||||||||||||||| || |||||||||    
T  2091791 agagcatatagaaataagttgaaaacaacttatggatatatcataagtt 2091839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 201 - 237
Target Start/End: Complemental strand, 2595027 - 2594991
Alignment:
Q  201 aataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    |||||||||||||||||||||| | ||||||||||||    
T  2595027 aataagctgaaaacaacttatgaacatgtcataagtt 2594991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 4055670 - 4055610
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    |||||||||  |||||||||   ||||||||||||||||  ||||||| ||||||||||||    
T  4055670 aagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagtt 4055610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 4762525 - 4762569
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttat 221  Q
    ||||||||||  ||||||||| |||||||||||||||||| ||||    
T  4762525 aagctatcttgaagagcttatgtaaataagctgaaaacaatttat 4762569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 6950350 - 6950394
Alignment:
Q  189 agagcttatataaataagctgaaaacaacttatggaaatgtcata 233  Q
    |||||||||  |||||||||||||||||||||| || ||||||||    
T  6950350 agagcttatggaaataagctgaaaacaacttatcgacatgtcata 6950394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 229 - 297
Target Start/End: Original strand, 11376784 - 11376852
Alignment:
Q  229 tcataagttctctataacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaa 297  Q
    ||||||||||||   || |||||||||||  ||||||||| ||| |||||||||||||| |||| ||||    
T  11376784 tcataagttctcccaaatagtctcacaagaacttatatcagtagataagctcaaataagccaattcaaa 11376852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 189 - 237
Target Start/End: Complemental strand, 12224941 - 12224893
Alignment:
Q  189 agagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    |||||| ||| |||||||||||||| |||| ||||| ||||||||||||    
T  12224941 agagctcataaaaataagctgaaaaaaactgatggacatgtcataagtt 12224893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 42215358 - 42215302
Alignment:
Q  179 gctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataag 235  Q
    |||||| | |||||||||| ||||||||||||||||| |||||| | | ||||||||    
T  42215358 gctatcctggagagcttatgtaaataagctgaaaacagcttatgaacaagtcataag 42215302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 386 - 483
Target Start/End: Complemental strand, 100244 - 100153
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatcaatatccattgtatcctgtttttgatctagatta 483  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||      ||||| |||||||||||| |||| || ||||||||||    
T  100244 atagaattaagggtttgttattcaatagtataacatgacttatataccggtgtca------atcaaaatccattgtatcttgttattcatctagatta 100153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 386 - 441
Target Start/End: Complemental strand, 42754 - 42699
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaa 441  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  42754 atagaattaagggctttttattcaatagtataacatgacttatataccggtgtcaa 42699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 4e-18; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 386 - 441
Target Start/End: Original strand, 23495129 - 23495184
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaa 441  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  23495129 atagaattaagggcttgtttttcaatagtataacatgacttatataccggtgtcaa 23495184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 237
Target Start/End: Original strand, 41724228 - 41724288
Alignment:
Q  178 agctatctttgagagcttatataaa-taagctgaaaacaacttatggaaatgtcataagtt 237  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  41724228 agctatccttgagagcttatataaaataagctgaaaacaacttatggacatgtcataagtt 41724288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 386 - 483
Target Start/End: Original strand, 26166650 - 26166741
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatcaatatccattgtatcctgtttttgatctagatta 483  Q
    |||||||||||| ||| |||||||| ||||||||||||||||||| |||||||||      ||||| |||||||||||| |||| || ||||||||||    
T  26166650 atagaattaaggccttcttattcaatagtataacatgacttatattccggtgtca------atcaaaatccattgtatcttgttattcatctagatta 26166741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 65 - 237
Target Start/End: Original strand, 1816489 - 1816659
Alignment:
Q  65 gcttgtagcataagagcttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttcatatataagctata 164  Q
    |||| ||||||||  | |||||||||||| ||| ||| ||| |||| || |||||| |||| |||||||||||||||  ||||||  | |||||| ||||    
T  1816489 gcttatagcataattgtttatcatataagagctaatgtataaactattttttataataaaagataaaataaagtcaaactgtttt--tgtataagatata 1816586  T
Q  165 agatgnnnnnnnaagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    || ||       |||||||  | ||||||||||  |||||||||||||||| | |||| ||||||||||||||    
T  1816587 agttgttttcataagctatactggagagcttatcaaaataagctgaaaacagcctatgaaaatgtcataagtt 1816659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 188 - 288
Target Start/End: Original strand, 25925769 - 25925869
Alignment:
Q  188 gagagcttatataaataagctgaaaacaacttatggaaatgtcataagttctctataacagtctcacaagttcttatatcattagttaagctcaaataag 287  Q
    ||||||||||  ||||||| |||||||| |||||| | ||||||||||||||||| |||||| | |||||| |||||  || ||| |||| |||||||||    
T  25925769 gagagcttatgaaaataagttgaaaacagcttatgaacatgtcataagttctctaaaacagtgttacaagtgcttatgccagtagataagttcaaataag 25925868  T
Q  288 t 288  Q
    |    
T  25925869 t 25925869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 54180823 - 54180776
Alignment:
Q  188 gagagcttatataaataagctgaaaacaacttatggaaatgtcataag 235  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  54180823 gagagcttatataaataagctaaaaacaacttatggacatgtcataag 54180776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 115 - 233
Target Start/End: Complemental strand, 33965605 - 33965486
Alignment:
Q  115 ttataacaaaatataaaataaagtcaagatgttttcatatataagctataagatgnnnnnnnaagctatctttgagagcttat-ataaataagctgaaaa 213  Q
    |||||||||||  ||||||||||||||  |||||||||||| |||||||||||||       ||||||||||  |||||||||   ||| ||||||||||    
T  33965605 ttataacaaaaggtaaaataaagtcaaactgttttcatataaaagctataagatgttttcataagctatcttgaagagcttatggaaaaaaagctgaaaa 33965506  T
Q  214 caacttatggaaatgtcata 233  Q
     |||||||||  ||||||||    
T  33965505 taacttatgggcatgtcata 33965486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 386 - 483
Target Start/End: Original strand, 29860065 - 29860164
Alignment:
Q  386 atagaattaagggcttgttattcaacagtat--------aacatgacttatataccggtgtcaaccaatatcaatatccattgtatcctgtttttgatct 477  Q
    ||||||||||||||||||||||||| |||||        ||||||||||||||||||||||||      |||||||||||||||||| |||| || ||||    
T  29860065 atagaattaagggcttgttattcaatagtataagtgtataacatgacttatataccggtgtca------atcaatatccattgtatcttgttattcatct 29860158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 43115075 - 43115132
Alignment:
Q  180 ctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    ||||| ||||||||||||  ||||||||||||||||| ||||||| ||||||||||||    
T  43115075 ctatcattgagagcttatggaaataagctgaaaacaagttatggacatgtcataagtt 43115132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 237
Target Start/End: Original strand, 37273150 - 37273210
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    |||||||||| |||| |||||  ||||||| ||||||||||||||||| ||||||||||||    
T  37273150 aagctatcttggagaacttatggaaataagttgaaaacaacttatggacatgtcataagtt 37273210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 197 - 240
Target Start/End: Complemental strand, 12923359 - 12923316
Alignment:
Q  197 tataaataagctgaaaacaacttatggaaatgtcataagttctc 240  Q
    |||||||||||||||||||||||||||| |||||||||| ||||    
T  12923359 tataaataagctgaaaacaacttatggacatgtcataagctctc 12923316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 386 - 449
Target Start/End: Original strand, 24910416 - 24910479
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatc 449  Q
    |||||||||| | |||||||||||||| ||||||||||||||||||  |||| ||| |||||||    
T  24910416 atagaattaatgacttgttattcaacaatataacatgacttatatattggtgccaatcaatatc 24910479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 24785221 - 24785279
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataag 235  Q
    |||||||| | |||||||||| |||||||||| ||||||||||||| | ||||||||||    
T  24785221 aagctatcctcgagagcttatgtaaataagctaaaaacaacttatgaacatgtcataag 24785279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 441
Target Start/End: Complemental strand, 45292018 - 45291964
Alignment:
Q  387 tagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaa 441  Q
    |||||| || || ||||||||||||||||||| |||||||||||| |||||||||    
T  45292018 tagaatcaaaggtttgttattcaacagtataatatgacttatatatcggtgtcaa 45291964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 260 - 301
Target Start/End: Complemental strand, 16072999 - 16072958
Alignment:
Q  260 cttatatcattagttaagctcaaataagtcaatccaaacagg 301  Q
    ||||| ||||||| ||||||||||||||||||||||||||||    
T  16072999 cttatgtcattagataagctcaaataagtcaatccaaacagg 16072958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 229 - 300
Target Start/End: Complemental strand, 25182976 - 25182908
Alignment:
Q  229 tcataagttctctataacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaacag 300  Q
    ||||||| |||||  |||||||||||||||||||||   | ||| ||||||||||||||||| |||||||||    
T  25182976 tcataagctctctcaaacagtctcacaagttcttat---agtaggtaagctcaaataagtcactccaaacag 25182908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 200 - 237
Target Start/End: Original strand, 36200135 - 36200172
Alignment:
Q  200 aaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  36200135 aaataagctgaaaacaacttatggacatgtcataagtt 36200172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 80 - 153
Target Start/End: Complemental strand, 44374792 - 44374720
Alignment:
Q  80 gcttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttcata 153  Q
    |||||||||||||||||||||| |||  |||  |||| |||||||| |||||||||||||||  ||||||||||    
T  44374792 gcttatcatataagtgcttatgtataagctatatctt-taacaaaagataaaataaagtcaaattgttttcata 44374720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 45541667 - 45541724
Alignment:
Q  244 aacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaacagg 301  Q
    |||||||| ||||||  ||||| |||||  ||||||||||||||||||||||||||||    
T  45541667 aacagtcttacaagtgtttataccattaaataagctcaaataagtcaatccaaacagg 45541724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 49586990 - 49586933
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataa 234  Q
    |||||||||| ||||| ||| | |||||| |||||||||||||||||| |||||||||    
T  49586990 aagctatcttggagagattaaagaaataaactgaaaacaacttatggatatgtcataa 49586933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 23793600 - 23793644
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttat 221  Q
    |||||||||| || |||||||| ||||||||||||||||||||||    
T  23793600 aagctatcttggaaagcttatagaaataagctgaaaacaacttat 23793644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 26990691 - 26990739
Alignment:
Q  116 tataacaaaatataaaataaagtcaagatgttttcatatataagctata 164  Q
    |||||||||| |||||||||||||||  | |||||||||||||||||||    
T  26990691 tataacaaaagataaaataaagtcaaattcttttcatatataagctata 26990739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 33883804 - 33883748
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcata 233  Q
    |||||||||| |||| |||||  ||||||||||||||||||||||| | ||||||||    
T  33883804 aagctatcttagagaacttatgaaaataagctgaaaacaacttatgaacatgtcata 33883748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 34924592 - 34924536
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcata 233  Q
    |||||||||| ||||||||||  |||||||||||||||||| ||||||  |||||||    
T  34924592 aagctatcttagagagcttatgaaaataagctgaaaacaacatatggacttgtcata 34924536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 81 - 141
Target Start/End: Complemental strand, 50016105 - 50016046
Alignment:
Q  81 cttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaa 141  Q
    ||||||||||||||||||||| ||  |||| |||| ||||| |||||||||||||||||||    
T  50016105 cttatcatataagtgcttatgtatggactatttct-ataaccaaatataaaataaagtcaa 50016046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 229
Target Start/End: Complemental strand, 21862228 - 21862177
Alignment:
Q  178 agctatctttgagagcttatataaataagctgaaaacaacttatggaaatgt 229  Q
    ||||||||  ||||||||||  ||||||||||||||||||||||||| ||||    
T  21862228 agctatctgggagagcttatggaaataagctgaaaacaacttatggacatgt 21862177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 21872269 - 21872214
Alignment:
Q  244 aacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaaca 299  Q
    ||||||||||||||| ||||| ||| ||| |||| |||||||||| ||||||||||    
T  21872269 aacagtctcacaagtgcttatgtcagtagataagatcaaataagttaatccaaaca 21872214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 37825149 - 37825196
Alignment:
Q  188 gagagcttatataaataagctgaaaacaacttatggaaatgtcataag 235  Q
    ||||||||||  |||||| |||||||||||||||||| ||||||||||    
T  37825149 gagagcttatggaaataacctgaaaacaacttatggacatgtcataag 37825196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 232
Target Start/End: Original strand, 40665449 - 40665500
Alignment:
Q  181 tatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcat 232  Q
    |||||| ||||||||||| |||||||||||||||| |||||| | |||||||    
T  40665449 tatcttggagagcttataaaaataagctgaaaacagcttatgaacatgtcat 40665500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 151
Target Start/End: Complemental strand, 41028999 - 41028929
Alignment:
Q  80 gcttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttca 151  Q
    |||||||||||||||||||||| |||  ||| ||| |||||||||| | |||||||||||||  ||||||||    
T  41028999 gcttatcatataagtgcttatgtataagctatttc-tataacaaaagaaaaaataaagtcaatctgttttca 41028929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 1217854 - 1217796
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataag 235  Q
    |||||||| |||||| |||||  || |||| ||||||||||||||||| ||||||||||    
T  1217854 aagctatccttgagaacttatgaaagtaagatgaaaacaacttatggacatgtcataag 1217796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 237
Target Start/End: Complemental strand, 3015887 - 3015837
Alignment:
Q  187 tgagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    |||||||||||  ||||||| |||||||| |||||||| ||||||||||||    
T  3015887 tgagagcttattaaaataagatgaaaacatcttatggacatgtcataagtt 3015837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 177 - 299
Target Start/End: Complemental strand, 13709877 - 13709755
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagttctctataacagtctcacaagttcttatatcattagttaa 276  Q
    |||||||| | ||||| ||||  |||||| ||||||||||||||||||  ||||||||  ||||   || |||||||||||| |||||  || ||| |||    
T  13709877 aagctatcctggagagtttattgaaataaactgaaaacaacttatggacttgtcataaactctcctaaatagtctcacaagtgcttatcccagtagataa 13709778  T
Q  277 gctcaaataagtcaatccaaaca 299  Q
      ||||||||||| || ||||||    
T  13709777 attcaaataagtcgatgcaaaca 13709755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 39602264 - 39602206
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataag 235  Q
    ||||||||||||||| |||||  ||||||| ||||||||| ||||| | ||||||||||    
T  39602264 aagctatctttgagaacttatgaaaataagttgaaaacaatttatgaacatgtcataag 39602206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 75 - 153
Target Start/End: Original strand, 48528495 - 48528572
Alignment:
Q  75 taagagcttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttcata 153  Q
    |||||||||||||||||||| |||||| |||  ||| ||| |||||||| | ||||||||||  |||| ||||||||||    
T  48528495 taagagcttatcatataagtacttatgtataagctatttc-tataacaagaaataaaataaaaccaagctgttttcata 48528572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 229 - 299
Target Start/End: Original strand, 50211816 - 50211886
Alignment:
Q  229 tcataagttctctataacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaaca 299  Q
    |||||||||||||  |||||||| |||||| ||||| | | ||| |||||| |||||||| ||||||||||    
T  50211816 tcataagttctctcaaacagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 50211886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 51206548 - 51206494
Alignment:
Q  181 tatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataag 235  Q
    |||| ||||||||||||  |||||||||||||||||||| |||| | ||||||||    
T  51206548 tatcattgagagcttatgaaaataagctgaaaacaacttttggataggtcataag 51206494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 2196477 - 2196424
Alignment:
Q  182 atctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataag 235  Q
    |||||||||||||||||||||||||| ||||| | |||||| | | ||||||||    
T  2196477 atctttgagagcttatataaataagcggaaaatagcttatgaacaagtcataag 2196424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 297
Target Start/End: Complemental strand, 20173860 - 20173811
Alignment:
Q  248 gtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaa 297  Q
    ||||||||||| ||||| ||| ||| || |||||||||||||||||||||    
T  20173860 gtctcacaagtgcttatttcaatagatacgctcaaataagtcaatccaaa 20173811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 299
Target Start/End: Complemental strand, 20210916 - 20210847
Alignment:
Q  230 cataagttctctataacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaaca 299  Q
    |||||| |||||  |||||||||||||||  |||| ||| ||| ||| ||||||||| ||||||||||||    
T  20210916 cataagatctctcaaacagtctcacaagtggttatgtcagtagataacctcaaataaatcaatccaaaca 20210847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 22667499 - 22667548
Alignment:
Q  244 aacagtctcacaagttcttatatcattagttaagctcaaataagtcaatc 293  Q
    ||||||||||||||| ||||| ||| ||| |||||||||||||| |||||    
T  22667499 aacagtctcacaagtgcttatgtcagtagataagctcaaataagccaatc 22667548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 22724138 - 22724187
Alignment:
Q  244 aacagtctcacaagttcttatatcattagttaagctcaaataagtcaatc 293  Q
    ||||||||||||||| ||||| ||| ||| |||||||||||||| |||||    
T  22724138 aacagtctcacaagtgcttatgtcagtagataagctcaaataagccaatc 22724187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 31010429 - 31010478
Alignment:
Q  188 gagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    ||||||||||  || ||||||||||||| |||||||| ||||||||||||    
T  31010429 gagagcttatggaattaagctgaaaacagcttatggacatgtcataagtt 31010478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 36507067 - 36507010
Alignment:
Q  244 aacagtctcacaa-gttcttatatcattagttaagctcaaataagtcaatccaaacag 300  Q
    ||||||||||||| | |||||||||| ||| ||| |||||||||| ||||||||||||    
T  36507067 aacagtctcacaaagctcttatatcagtagataaactcaaataagccaatccaaacag 36507010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 299
Target Start/End: Original strand, 41155291 - 41155320
Alignment:
Q  270 tagttaagctcaaataagtcaatccaaaca 299  Q
    ||||||||||||||||||||||||||||||    
T  41155291 tagttaagctcaaataagtcaatccaaaca 41155320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 45432981 - 45432936
Alignment:
Q  189 agagcttatataaataagctgaaaacaacttatggaaatgtcataa 234  Q
    |||||||||  ||||||||||||||||||||||| | |||||||||    
T  45432981 agagcttatggaaataagctgaaaacaacttatgaacatgtcataa 45432936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 1810009 - 1810053
Alignment:
Q  193 cttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    |||||| |||||||| |||||||||| ||||| ||||||||||||    
T  1810009 cttatagaaataagcagaaaacaactcatggacatgtcataagtt 1810053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 183 - 219
Target Start/End: Original strand, 2318667 - 2318703
Alignment:
Q  183 tctttgagagcttatataaataagctgaaaacaactt 219  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  2318667 tcttggagagcttatagaaataagctgaaaacaactt 2318703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 11039368 - 11039336
Alignment:
Q  202 ataagctgaaaacaacttatggaaatgtcataa 234  Q
    ||||||||||||||||||||||| |||||||||    
T  11039368 ataagctgaaaacaacttatggacatgtcataa 11039336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 189 - 221
Target Start/End: Original strand, 27792900 - 27792932
Alignment:
Q  189 agagcttatataaataagctgaaaacaacttat 221  Q
    |||||||||| ||||||||||||||||||||||    
T  27792900 agagcttatagaaataagctgaaaacaacttat 27792932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 244 - 296
Target Start/End: Original strand, 36200192 - 36200244
Alignment:
Q  244 aacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaa 296  Q
    |||| |||||||||| ||  | ||||||| |||||||||||||||||||||||    
T  36200192 aacattctcacaagtgctgttttcattagataagctcaaataagtcaatccaa 36200244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 237
Target Start/End: Original strand, 42745054 - 42745114
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    ||||||||||  | |||||||  ||||||| ||||||||||||||| | ||||||||||||    
T  42745054 aagctatcttcaaaagcttatggaaataagatgaaaacaacttatgaacatgtcataagtt 42745114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 48528652 - 48528708
Alignment:
Q  244 aacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaacag 300  Q
    ||||||||| ||| | ||||||||||| | |||||||||||||  ||||||||||||    
T  48528652 aacagtctcccaaatacttatatcattcgataagctcaaataaaccaatccaaacag 48528708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 49546538 - 49546486
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgt 229  Q
    |||||||| | ||||||||||  ||||| |||||||||||||||| |||||||    
T  49546538 aagctatcatggagagcttattgaaatatgctgaaaacaacttatagaaatgt 49546486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 274 - 306
Target Start/End: Original strand, 51929867 - 51929899
Alignment:
Q  274 taagctcaaataagtcaatccaaacagggccaa 306  Q
    |||||||||||||||||||||||||||| ||||    
T  51929867 taagctcaaataagtcaatccaaacaggcccaa 51929899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 53848106 - 53848058
Alignment:
Q  188 gagagcttatataaataagctgaaaacaacttatggaaatgtcataagt 236  Q
    ||||||||||| |||||||| ||||||| |||||||| |||||| ||||    
T  53848106 gagagcttatagaaataagccgaaaacagcttatggacatgtcacaagt 53848058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 445
Target Start/End: Original strand, 201448 - 201521
Alignment:
Q  372 aattctctataagtatagaattaagggcttgttattcaacagtataacat-gacttatataccggtgtcaaccaa 445  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||  ||||||||||    
T  201448 aattctctataagtatagaattaagggcttgttatttaacagtataacatagac-tatataccaatgtcaaccaa 201521  T

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Target: scaffold0862 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0862
Description:

Target: scaffold0862; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 386 - 483
Target Start/End: Original strand, 1605 - 1696
Alignment:
Q  386 atagaattaagggcttgttattcaacagtataacatgacttatataccggtgtcaaccaatatcaatatccattgtatcctgtttttgatctagatta 483  Q
    |||||||||||| ||| |||||||  ||||||||||||||||||||| |||||||      ||||| |||||||||||| |||| || ||||||||||    
T  1605 atagaattaaggacttcttattcagtagtataacatgacttatatactggtgtca------atcaaaatccattgtatcttgttattcatctagatta 1696  T

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Target: scaffold0147 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 12758 - 12698
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    |||||||||| ||||||||||  |  |||||||||||||||||||||| ||||||||||||    
T  12758 aagctatcttagagagcttatggagctaagctgaaaacaacttatggacatgtcataagtt 12698  T

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Target: scaffold0654 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 81 - 153
Target Start/End: Complemental strand, 6784 - 6713
Alignment:
Q  81 cttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttcata 153  Q
    ||||||||||||||||||||| ||| |||| ||| |||||||||| ||||| | |||||||  ||||||||||    
T  6784 cttatcatataagtgcttatgtataaactatttc-tataacaaaaaataaacttaagtcaaattgttttcata 6713  T

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Target: scaffold0159 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 293
Target Start/End: Original strand, 27017 - 27132
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagttctctataacagtctcacaagttcttatatcattagttaa 276  Q
    |||||||| | ||||||||||  ||||||||||||||||  ||||| | |||||||||| ||||   |||||| |||||||| |||| | || | || ||    
T  27017 aagctatcatagagagcttatggaaataagctgaaaacagtttatgcacatgtcataagctctcgcaaacagtgtcacaagtgcttaaaccagt-gtaaa 27115  T
Q  277 gctcaaataagtcaatc 293  Q
    | |||||||||||||||    
T  27116 gttcaaataagtcaatc 27132  T

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Target: scaffold0014 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 81 - 153
Target Start/End: Complemental strand, 116703 - 116632
Alignment:
Q  81 cttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttcata 153  Q
    ||||||||||||||||||||| ||| |||| ||| |||||||||| ||||| | |||||||  ||||||||||    
T  116703 cttatcatataagtgcttatgtataaactatttc-tataacaaaaaataaacttaagtcaaattgttttcata 116632  T

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Target: scaffold0590 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 83 - 141
Target Start/End: Complemental strand, 1219 - 1162
Alignment:
Q  83 tatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaa 141  Q
    ||||||||||||||||||| |||  ||| |||| ||||||||| |||||||||||||||    
T  1219 tatcatataagtgcttatgtataagctatttct-ataacaaaagataaaataaagtcaa 1162  T

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Target: scaffold0275 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 83 - 141
Target Start/End: Original strand, 2756 - 2813
Alignment:
Q  83 tatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaa 141  Q
    ||||||||||||||||||| |||  ||| |||| ||||||||| |||||||||||||||    
T  2756 tatcatataagtgcttatgtataagctatttct-ataacaaaagataaaataaagtcaa 2813  T

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Target: scaffold0024 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 155
Target Start/End: Original strand, 27483 - 27572
Alignment:
Q  65 gcttgtagcataagagcttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttcatata 155  Q
    |||| |||||||||  |||||||| |||||||||||| |||   || |||| |||||| || |||||||||||||||  ||||||||||||    
T  27483 gcttatagcataagctcttatcatgtaagtgcttatgtataagttatttct-ataacagaagataaaataaagtcaaattgttttcatata 27572  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 306342 - 306400
Alignment:
Q  177 aagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataag 235  Q
    |||||||| | |||||||||| ||| ||||||||||||| |||||||  ||||||||||    
T  306342 aagctatcctagagagcttatgtaagtaagctgaaaacagcttatgggcatgtcataag 306400  T

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Target: scaffold0311 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 10648 - 10611
Alignment:
Q  200 aaataagctgaaaacaacttatggaaatgtcataagtt 237  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  10648 aaataagctgaaaacaacttatggacatgtcattagtt 10611  T

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Target: scaffold0199 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 200 - 300
Target Start/End: Original strand, 6862 - 6962
Alignment:
Q  200 aaataagctgaaaacaacttatggaaatgtcataagttctctataacagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaaca 299  Q
    |||||| || ||||||||| ||||| |||||||||| ||||   |||||||||||||||  ||||   | ||| ||| |||||||||||| ||| |||||    
T  6862 aaataaactcaaaacaactaatggacatgtcataagctctcccaaacagtctcacaagtgtttatgctagtagataaactcaaataagtccatctaaaca 6961  T
Q  300 g 300  Q
    |    
T  6962 g 6962  T

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