View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: F9282-LTR4-TNT-insertion-3 (Length: 825)

Name: F9282-LTR4-TNT-insertion-3
Description: F9282-LTR4
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] F9282-LTR4-TNT-insertion-3
F9282-LTR4-TNT-insertion-3
[»] chr6 (65 HSPs)
chr6 (11-568)||(29842597-29843154)
chr6 (11-568)||(29826996-29827563)
chr6 (57-422)||(28140701-28141066)
chr6 (58-367)||(28244016-28244325)
chr6 (56-393)||(28787433-28787770)
chr6 (61-376)||(28186606-28186921)
chr6 (56-393)||(28793554-28793891)
chr6 (153-386)||(27705001-27705234)
chr6 (157-377)||(27609871-27610091)
chr6 (164-386)||(26624473-26624695)
chr6 (164-386)||(26730450-26730672)
chr6 (130-378)||(28326688-28326936)
chr6 (130-378)||(28504324-28504572)
chr6 (157-356)||(27697337-27697536)
chr6 (157-380)||(31285767-31285990)
chr6 (157-359)||(27426363-27426565)
chr6 (159-377)||(27717252-27717470)
chr6 (56-386)||(26885269-26885599)
chr6 (54-399)||(28097091-28097436)
chr6 (157-380)||(27680158-27680381)
chr6 (157-391)||(26647676-26647910)
chr6 (157-391)||(26753644-26753878)
chr6 (56-393)||(26803641-26803978)
chr6 (156-376)||(26862792-26863012)
chr6 (163-367)||(28240578-28240778)
chr6 (151-358)||(28296485-28296692)
chr6 (151-358)||(28515381-28515588)
chr6 (53-353)||(26938264-26938564)
chr6 (67-311)||(27603365-27603609)
chr6 (158-392)||(26825015-26825249)
chr6 (155-279)||(27530053-27530177)
chr6 (157-396)||(27663965-27664204)
chr6 (199-396)||(25075059-25075256)
chr6 (155-312)||(27215728-27215885)
chr6 (201-356)||(25492114-25492269)
chr6 (56-311)||(26657239-26657494)
chr6 (56-311)||(26763210-26763465)
chr6 (155-397)||(26812719-26812961)
chr6 (199-396)||(26849904-26850101)
chr6 (157-423)||(27591772-27592038)
chr6 (157-423)||(27676371-27676637)
chr6 (63-312)||(26144144-26144393)
chr6 (153-312)||(25484335-25484494)
chr6 (153-312)||(25512167-25512326)
chr6 (158-396)||(26636838-26637076)
chr6 (158-396)||(26742804-26743042)
chr6 (205-356)||(26950975-26951126)
chr6 (206-396)||(26960317-26960507)
chr6 (205-348)||(28228192-28228335)
chr6 (370-423)||(29823237-29823291)
chr6 (199-356)||(26978612-26978769)
chr6 (155-267)||(26057243-26057355)
chr6 (155-267)||(26077213-26077325)
chr6 (227-311)||(27336916-27337000)
chr6 (227-311)||(27397656-27397740)
chr6 (157-277)||(29469523-29469643)
chr6 (480-568)||(28326488-28326579)
chr6 (480-568)||(28504124-28504215)
chr6 (342-378)||(29823969-29824005)
chr6 (54-97)||(2186317-2186360)
chr6 (130-233)||(28182464-28182567)
chr6 (79-125)||(28150644-28150690)
chr6 (479-568)||(28235575-28235667)
chr6 (479-568)||(28243805-28243897)
chr6 (507-568)||(28182128-28182189)
[»] chr4 (12 HSPs)
chr4 (594-817)||(30269993-30270216)
chr4 (594-817)||(30281973-30282196)
chr4 (609-817)||(30302340-30302550)
chr4 (57-423)||(5089601-5089967)
chr4 (157-359)||(18074990-18075192)
chr4 (609-760)||(30262357-30262508)
chr4 (157-393)||(18654224-18654460)
chr4 (157-393)||(18722832-18723068)
chr4 (157-393)||(18678307-18678543)
chr4 (157-393)||(18688373-18688609)
chr4 (157-356)||(18698147-18698346)
chr4 (157-356)||(18730251-18730450)
[»] chr5 (1 HSPs)
chr5 (56-358)||(16692097-16692399)
[»] chr2 (2 HSPs)
chr2 (67-357)||(3280890-3281180)
chr2 (158-311)||(17991967-17992120)
[»] scaffold0038 (5 HSPs)
scaffold0038 (58-367)||(44178-44487)
scaffold0038 (163-367)||(40740-40940)
scaffold0038 (205-348)||(28690-28833)
scaffold0038 (479-568)||(35737-35829)
scaffold0038 (479-568)||(43967-44059)
[»] scaffold0349 (1 HSPs)
scaffold0349 (159-377)||(2292-2510)
[»] scaffold0003 (1 HSPs)
scaffold0003 (157-359)||(60798-61000)
[»] scaffold1870 (1 HSPs)
scaffold1870 (56-356)||(1-301)
[»] scaffold0277 (2 HSPs)
scaffold0277 (157-393)||(3463-3699)
scaffold0277 (157-393)||(12426-12662)
[»] scaffold0419 (1 HSPs)
scaffold0419 (56-393)||(8682-9019)
[»] scaffold0019 (2 HSPs)
scaffold0019 (58-376)||(56946-57264)
scaffold0019 (479-568)||(57374-57466)
[»] chr1 (5 HSPs)
chr1 (151-368)||(267085-267302)
chr1 (64-393)||(28126333-28126662)
chr1 (56-308)||(28132151-28132403)
chr1 (155-356)||(26137120-26137321)
chr1 (147-295)||(5922210-5922358)
[»] chr8 (5 HSPs)
chr8 (157-356)||(29272589-29272788)
chr8 (168-308)||(31906334-31906474)
chr8 (167-268)||(35984619-35984720)
chr8 (56-100)||(31906548-31906592)
chr8 (56-100)||(35984793-35984837)


Alignment Details
Target: chr6 (Bit Score: 558; Significance: 0; HSPs: 65)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 558; E-Value: 0
Query Start/End: Original strand, 11 - 568
Target Start/End: Original strand, 29842597 - 29843154
Alignment:
Q  11 ctatcaagtcatgtagtgtcacaatagcatgcgaactcaactgaataatctttatgagagttttttcgaccaacactccaatatgatattctatgcattg 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29842597 ctatcaagtcatgtagtgtcacaatagcatgcgaactcaactgaataatctttatgagagttttttcgaccaacactccaatatgatattctatgcattg 29842696  T
Q  111 accatgataagcacaaagaatatcttcaacctctcccaaatcataccctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaa 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29842697 accatgataagcacaaagaatatcttcaacctctcccaaatcataccctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaa 29842796  T
Q  211 gcatcaaagcttattttaagtatattgtggatctctttattaggaatcctttcatacctatctaatgtagatttccattcttctatattctttccaaaca 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29842797 gcatcaaagcttattttaagtatattgtggatctctttattaggaatcctttcatacctatctaatgtagatttccattcttctatattctttccaaaca 29842896  T
Q  311 aagctggacctactaattctaaaaccaacggaaggccagaagcataagctattgcacggtctaaaatgtcatcatagcttgaatcaactatactattttt 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29842897 aagctggacctactaattctaaaaccaacggaaggccagaagcataagctattgcacggtctaaaatgtcatcatagcttgaatcaactatactattttt 29842996  T
Q  411 aaaagctttccacattcaagggattctttcctatttagcgcatttacttgatattttatataaatcgaatgacttgttagcaaatgttggtctcgagtaa 510  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29842997 aaaagctttccacattcaagggattctttcctatttagcgcatttacttgatattttatataaatcgaatgacttgttagcaaatgttggtctcgagtaa 29843096  T
Q  511 tgatcactctgctaccaggaccaaaccagtcaagtccgcccgccataacttgcaattg 568  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29843097 tgatcactctgctaccaggaccaaaccagtcaagtccgcccgccataacttgcaattg 29843154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 404; E-Value: 0
Query Start/End: Original strand, 11 - 568
Target Start/End: Complemental strand, 29827563 - 29826996
Alignment:
Q  11 ctatcaagtcatgtagtgtcacaatagcatgcgaactcaactgaataatctttatgagagttttttcgaccaacactccaatatgatattctatgcattg 110  Q
    ||||||||||||||| |||||||| ||||| || || ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  29827563 ctatcaagtcatgtaatgtcacaacagcatccgtacccaaatgaataatctgtatgagagttttttcgaccaacactccaatatgatattctatgctttg 29827464  T
Q  111 accatgataagcacaaagaatatcttcaacctctcccaaatcataccctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaa 210  Q
    |||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  29827463 accatgatgagcacaaagaatatctttgacctctcccaaatcataccctttgaagcaacaagcaatgtcgagaaaaacaccttgttcatcttcctccaaa 29827364  T
Q  211 gcatcaaagcttattttaagtatattgtggatctctttattaggaatcctttcatacctatctaatgtagatttccattcttctatattctttccaaaca 310  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  29827363 gcatcaaaacttattttaagtatattttggatctctttattaggaatcctttcatatctatctaatatagatttccattcttctatattctttccaaaca 29827264  T
Q  311 aagctggacctactaattctaaaaccaacggaaggccagaagcataagctattgcacggtctaaaatgtcatcatagcttgaatcaactatactattttt 410  Q
    | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||    
T  29827263 acgcgggacctactaattctaaaaccaacggaaggccagaagcataagctattgcacggtctaaaatgtcatcatatcttgaatcacctatactatcttt 29827164  T
Q  411 aaaagctttccac-------attcaagggattctttcctatttagcgcatttacttgatattttatataaatcgaatgacttgttagcaaatgttggtct 503  Q
    |||||||||||||       |||||||||||||| ||||||||||||||| ||||||||||||| ||| ||||  |||||||||||||||||||||||||    
T  29827163 aaaagctttccacctaaataattcaagggattctatcctatttagcgcatctacttgatattttctatgaatcccatgacttgttagcaaatgttggtct 29827064  T
Q  504 cga---gtaatgatcactctgctaccaggaccaaaccagtcaagtccgcccgccataacttgcaattg 568  Q
    |||   |||||||||||| |||| |||||||||||||| |||||||| ||||||||||||||||||||    
T  29827063 cgagtggtaatgatcactatgctgccaggaccaaaccaatcaagtcctcccgccataacttgcaattg 29826996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 57 - 422
Target Start/End: Complemental strand, 28141066 - 28140701
Alignment:
Q  57 aatctttatgagagttttttcgaccaacactccaatatgatattctatgcattgaccatgataagcacaaagaatatcttcaacctctcccaaatcatac 156  Q
    ||||||||| |||  ||| |||| |||||||| |||||||||||  ||||||| ||| | || |||| | |||||||||||||||||| | ||   |||     
T  28141066 aatctttattagacatttctcgatcaacactctaatatgatatttcatgcattcaccgtaatgagcatagagaatatcttcaacctctgctaatatatat 28140967  T
Q  157 cctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaa 256  Q
    ||| |||| ||||||||||||||||||||||||| ||| || |||| |||||||  ||||||||| | ||||||||| ||  ||| |||||||| |||||    
T  28140966 cctctgaaacaacaagcaatgtcgagaaaaacactttgctcatctttctccaaactatcaaagctcactttaagtatcttcaggacctctttatgaggaa 28140867  T
Q  257 tcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagct-ggacctactaattctaaaaccaacggaaggccagaagcat 355  Q
    |||||||||||| |||||||||||||||||| || ||| ||| |||||||||| ||||| | ||| |||| ||||||| |||| ||||||||||| ||||    
T  28140866 tcctttcataccgatctaatgtagatttccactcatctttatgctttccaaac-aagctagaaccaactacttctaaagccaatggaaggccagaggcat 28140768  T
Q  356 aagctattgcacggtctaaaatgtcatcatagcttgaatcaactatactatttttaaaagctttcca 422  Q
    |||  | |||||||| ||||||||  ||||| |||||||||||| || |||||||||| || |||||    
T  28140767 aagtaactgcacggtttaaaatgtgctcataacttgaatcaactttattatttttaaatgccttcca 28140701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 58 - 367
Target Start/End: Complemental strand, 28244325 - 28244016
Alignment:
Q  58 atctttatgagagttttttcgaccaacactccaatatgatattctatgcattgaccatgataagcacaaagaatatcttcaacctctcccaaatcatacc 157  Q
    ||||||||||||| ||||||  ||||||| |  || |||||||  ||||| | ||||| || |||| |||| ||||||||||  |||  ||||| ||| |    
T  28244325 atctttatgagagatttttcatccaacacactgatttgatatttcatgcagttaccataatgagcataaagtatatcttcaagttctttcaaattatatc 28244226  T
Q  158 ctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaat 257  Q
    |||||||||| |||||||||||||||||||||   || || |||| |||||||||||||||||||| ||||||||| |  || |||| |||| | |||||    
T  28244225 ctttgaagcagcaagcaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcggaat 28244126  T
Q  258 cctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctggacctactaattctaaaaccaacggaaggccagaagcataa 357  Q
    ||||  ||||| |||||||| ||||||||||||| ||||||| |||||||| ||   || ||| |||| ||||||| |||| ||||||||||||||||||    
T  28244125 ccttctataccgatctaatgcagatttccattctcctatattatttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagcataa 28244026  T
Q  358 gctattgcac 367  Q
    | || |||||    
T  28244025 gttactgcac 28244016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 56 - 393
Target Start/End: Complemental strand, 28787770 - 28787433
Alignment:
Q  56 taatctttatgagagttttttcgaccaacactccaatatgatattctatgcattgaccatgataagcacaaagaatatcttcaacctctcccaaatcata 155  Q
    ||||||| | ||||| ||||||  |||||||||| | ||||| |  |||||| || |||| || ||||| ||| |||||||||| |||  || | ||| |    
T  28787770 taatcttaacgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagcacgaagtatatcttcaaactcctcccactcaca 28787671  T
Q  156 ccctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattagga 255  Q
     |||||||||||||| |||||||| |||||||||| |||||  |||||||||||||||||| |||||| ||||||||| | |||||||| |||||| |||    
T  28787670 tcctttgaagcaacatgcaatgtctagaaaaacactttgttgctcttcctccaaagcatcatagcttactttaagtatctcgtggatctttttattggga 28787571  T
Q  256 atcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctgg-acctactaattctaaaaccaacggaaggccagaagca 354  Q
    ||| ||||||| | |||||| |||   ||||||||||||||  ||||||||||| ||| ||| ||| |||| ||||||||| || |||||||| ||||||    
T  28787570 atcttttcatatccatctaaagtacccttccattcttctatcgtctttccaaac-aagttggaacccactatttctaaaactaagggaaggcccgaagca 28787472  T
Q  355 taagctattgcacggtctaaaatgtcatcatagcttgaa 393  Q
    ||||  | |||||| | ||||| ||| ||||| ||||||    
T  28787471 taagaaactgcacgatttaaaacgtcttcataacttgaa 28787433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 61 - 376
Target Start/End: Complemental strand, 28186921 - 28186606
Alignment:
Q  61 tttatgagagttttttcgaccaacactccaatatgatattctatgcattgaccatgataagcacaaagaatatcttcaacctctcccaaatcataccctt 160  Q
    |||| ||||| ||| |||| ||||||||  || |||||||  ||||| | ||||| || ||||  ||| | ||||||||  |||  ||| ||||| ||||    
T  28186921 tttaggagagatttatcgagcaacactctgatttgatatttcatgcagttaccataatgagcatgaagtacatcttcaagttctttcaattcatatcctt 28186822  T
Q  161 tgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaatcct 260  Q
    ||||||| ||||| |||||||||||||||  ||||||  ||||| |||||||||||||||||| ||| ||||| |  ||||||| |||||  ||||||||    
T  28186821 tgaagcagcaagcgatgtcgagaaaaacattttgttctgcttcccccaaagcatcaaagcttactttgagtatctcttggatctttttatcgggaatcct 28186722  T
Q  261 ttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctgg-acctactaattctaaaaccaacggaaggccagaagcataagc 359  Q
    |||||||  || ||||| ||||||||||||| ||||||||||||||||| ||| ||| ||| |||| ||||||| |||| |||||||||||||||||||     
T  28186721 ttcatactgatttaatgcagatttccattctcctatattctttccaaac-aagttggaacccactacttctaaagccaatggaaggccagaagcataagt 28186623  T
Q  360 tattgcacggtctaaaa 376  Q
    || |||| ||| |||||    
T  28186622 tactgcatggtgtaaaa 28186606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 56 - 393
Target Start/End: Complemental strand, 28793891 - 28793554
Alignment:
Q  56 taatctttatgagagttttttcgaccaacactccaatatgatattctatgcattgaccatgataagcacaaagaatatcttcaacctctcccaaatcata 155  Q
    ||||||| | ||||| ||||||  |||||||||| | ||||| |  |||||| || |||| || ||||| ||| |||||||||| |||  || | ||| |    
T  28793891 taatcttaacgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagcacgaagtatatcttcaaactcctcccactcaca 28793792  T
Q  156 ccctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattagga 255  Q
     |||||||||||||| |||||||| |||||||||| |||||  |||||||||||||||||| |||||| ||||||||| | |||||||| |||||| |||    
T  28793791 tcctttgaagcaacatgcaatgtctagaaaaacactttgttgctcttcctccaaagcatcatagcttactttaagtatctcgtggatctttttattggga 28793692  T
Q  256 atcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctgg-acctactaattctaaaaccaacggaaggccagaagca 354  Q
    ||| ||||||| | |||||| |||   ||||||||||||||  ||||||||||| ||| ||| ||| |||| ||||||||| || |||||||| ||||||    
T  28793691 atcttttcatatccatctaaagtacccttccattcttctatcgtctttccaaac-aagttggaacccactatttctaaaactaagggaaggcccgaagca 28793593  T
Q  355 taagctattgcacggtctaaaatgtcatcatagcttgaa 393  Q
    || |  | |||||| | ||||| ||| ||||| ||||||    
T  28793592 tacgaaactgcacgatttaaaacgtcttcataacttgaa 28793554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 153 - 386
Target Start/End: Original strand, 27705001 - 27705234
Alignment:
Q  153 ataccctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttatta 252  Q
    ||||||||| ||||||||||||||||| ||||| ||||  || || ||||| |||||||||||| |||| | | ||||||| || ||||||||||||||     
T  27705001 atacccttttaagcaacaagcaatgtcaagaaagacactctgctcctcttcttccaaagcatcatagctcactctaagtatcttttggatctctttattg 27705100  T
Q  253 ggaatcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctggacctactaattctaaaaccaacggaaggccagaag 352  Q
    |||||||| ||||||| ||||||||||   |||||||||||||| ||||| ||||||||    | ||| | || ||||||||| ||||||||||||||||    
T  27705101 ggaatcctgtcatacccatctaatgtattcttccattcttctatgttcttgccaaacaagttagaacccattacttctaaaactaacggaaggccagaag 27705200  T
Q  353 cataagctattgcacggtctaaaatgtcatcata 386  Q
    |||| || | |||||||| ||||||||| |||||    
T  27705201 catatgcaactgcacggtttaaaatgtcttcata 27705234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 157 - 377
Target Start/End: Original strand, 27609871 - 27610091
Alignment:
Q  157 cctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaa 256  Q
    ||||||||||||||||||||||| ||||| |||| ||| || ||||| ||||||| |||| |||| | ||||||||| || |||||||||||||| ||||    
T  27609871 cctttgaagcaacaagcaatgtccagaaagacactttgctcctcttcttccaaagaatcatagctcactttaagtatcttttggatctctttattgggaa 27609970  T
Q  257 tcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctggacctactaattctaaaaccaacggaaggccagaagcata 356  Q
    |||| ||||||| |||||||||| | |||||||| ||||| ||||||||||||||    | ||| |||| ||||| ||| ||||||||||||||||||||    
T  27609971 tcctgtcatacccatctaatgtatacttccattcctctatgttctttccaaacaagttagaacccactatttctataactaacggaaggccagaagcata 27610070  T
Q  357 agctattgcacggtctaaaat 377  Q
     || |  ||||||| ||||||    
T  27610071 tgcaacagcacggtttaaaat 27610091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 164 - 386
Target Start/End: Complemental strand, 26624695 - 26624473
Alignment:
Q  164 agcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaatcctttc 263  Q
    ||||||||||||| || ||||| ||||  || || ||||| |||||||||||| |||| | ||||||||| || |||||||||||||| |||||||| ||    
T  26624695 agcaacaagcaatatctagaaagacactctgctcctcttcttccaaagcatcatagctcactttaagtatcttttggatctctttattgggaatcctgtc 26624596  T
Q  264 atacctatctaatgtagatttccattcttctatattctttccaaacaaagctgga-cctactaattctaaaaccaacggaaggccagaagcataagctat 362  Q
    ||||| |||||||||| | ||||||||||||||  ||||||||||||| | |||| || || | ||||||||| |||||||||||||||||||| || |     
T  26624595 atacccatctaatgtatacttccattcttctatgctctttccaaacaa-gttggaacccacaatttctaaaactaacggaaggccagaagcatatgcaac 26624497  T
Q  363 tgcacggtctaaaatgtcatcata 386  Q
    |||||||| ||||||||| |||||    
T  26624496 tgcacggtttaaaatgtcttcata 26624473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 164 - 386
Target Start/End: Complemental strand, 26730672 - 26730450
Alignment:
Q  164 agcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaatcctttc 263  Q
    ||||||||||||| || ||||| ||||  || || ||||| |||||||||||| |||| | ||||||||| || |||||||||||||| |||||||| ||    
T  26730672 agcaacaagcaatatctagaaagacactctgctcctcttcttccaaagcatcatagctcactttaagtatcttttggatctctttattgggaatcctgtc 26730573  T
Q  264 atacctatctaatgtagatttccattcttctatattctttccaaacaaagctgga-cctactaattctaaaaccaacggaaggccagaagcataagctat 362  Q
    ||||| |||||||||| | ||||||||||||||  ||||||||||||| | |||| || || | ||||||||| |||||||||||||||||||| || |     
T  26730572 atacccatctaatgtatacttccattcttctatgctctttccaaacaa-gttggaacccacaatttctaaaactaacggaaggccagaagcatatgcaac 26730474  T
Q  363 tgcacggtctaaaatgtcatcata 386  Q
    |||||||| ||||||||| |||||    
T  26730473 tgcacggtttaaaatgtcttcata 26730450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 130 - 378
Target Start/End: Complemental strand, 28326936 - 28326688
Alignment:
Q  130 atatcttcaacctctcccaaatcataccctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaa 229  Q
    ||||||||||  |||  ||| ||||| || |||||||| |||||||||||||||||||||   || || ||||| ||||||||||||||||||| |||||    
T  28326936 atatcttcaagttctttcaattcatatccattgaagcagcaagcaatgtcgagaaaaacattctgctcatcttcatccaaagcatcaaagcttactttaa 28326837  T
Q  230 gtatattgtggatctctttattaggaatcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctgg-acctactaatt 328  Q
    ||||    ||||||| |||| | |||||||||||||||  || ||||| |||||| |||||| ||||||||||||||||| ||| ||| ||| |||| ||    
T  28326836 gtatcgcttggatctttttaatgggaatcctttcatactgatataatgcagatttacattctactatattctttccaaac-aagttggaacccactactt 28326738  T
Q  329 ctaaaaccaacggaaggccagaagcataagctattgcacggtctaaaatg 378  Q
    ||||| |||| ||||||||||||||||||| || ||||| || |||||||    
T  28326737 ctaaagccaatggaaggccagaagcataagttactgcacagtataaaatg 28326688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 130 - 378
Target Start/End: Complemental strand, 28504572 - 28504324
Alignment:
Q  130 atatcttcaacctctcccaaatcataccctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaa 229  Q
    ||||||||||  |||  ||| ||||| || |||||||| |||||||||||||||||||||   || || ||||| ||||||||||||||||||| |||||    
T  28504572 atatcttcaagttctttcaattcatatccattgaagcagcaagcaatgtcgagaaaaacattctgctcatcttcatccaaagcatcaaagcttactttaa 28504473  T
Q  230 gtatattgtggatctctttattaggaatcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctgg-acctactaatt 328  Q
    ||||    ||||||| |||| | |||||||||||||||  || ||||| |||||| |||||| ||||||||||||||||| ||| ||| ||| |||| ||    
T  28504472 gtatcgcttggatctttttaatgggaatcctttcatactgatataatgcagatttacattctactatattctttccaaac-aagttggaacccactactt 28504374  T
Q  329 ctaaaaccaacggaaggccagaagcataagctattgcacggtctaaaatg 378  Q
    ||||| |||| ||||||||||||||||||| || ||||| || |||||||    
T  28504373 ctaaagccaatggaaggccagaagcataagttactgcacagtataaaatg 28504324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 157 - 356
Target Start/End: Original strand, 27697337 - 27697536
Alignment:
Q  157 cctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaa 256  Q
    ||||||||||||||||||||||| ||||| |||| ||| || ||||| |||||||||||| |||| | | ||||||| || |||||||||||||| ||||    
T  27697337 cctttgaagcaacaagcaatgtccagaaagacactttgctcctcttcttccaaagcatcatagctcactctaagtatcttttggatctctttattgggaa 27697436  T
Q  257 tcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctggacctactaattctaaaaccaacggaaggccagaagcata 356  Q
    |||| ||||||| ||||||| || | |||||||||||||| ||||||||||||||    | ||| |||| ||||| ||| ||||||||||||||| ||||    
T  27697437 tcctgtcatacccatctaatatatacttccattcttctatgttctttccaaacaagttagaacccactatttctataactaacggaaggccagaaacata 27697536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 157 - 380
Target Start/End: Complemental strand, 31285990 - 31285767
Alignment:
Q  157 cctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaa 256  Q
    ||||||||||||||||||||||| ||||| ||||  || || ||||| |||||||||||| |||||| ||||||||| || |||||||||||||| ||||    
T  31285990 cctttgaagcaacaagcaatgtccagaaagacactctgctcctcttcttccaaagcatcatagcttactttaagtatcttttggatctctttattgggaa 31285891  T
Q  257 tcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctggacctactaattctaaaaccaacggaaggccagaagcata 356  Q
    || | ||||||| ||||||||||   ||||||| ||||||  |||||||||||||   || ||| |||| ||||| ||| || ||||||||||||| |||    
T  31285890 tcttgtcatacccatctaatgtactcttccatttttctatgctctttccaaacaagtttgaacccactacttctataactaatggaaggccagaagaata 31285791  T
Q  357 agctattgcacggtctaaaatgtc 380  Q
     || | |||||||| |||||||||    
T  31285790 tgcaactgcacggtttaaaatgtc 31285767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 157 - 359
Target Start/End: Original strand, 27426363 - 27426565
Alignment:
Q  157 cctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaa 256  Q
    ||||||||||||||||||||||| ||||| |||| ||| || ||||||||||||| |||| |||| | |||||||||  | |||||||||||||| ||||    
T  27426363 cctttgaagcaacaagcaatgtctagaaagacactttgctcctcttcctccaaagaatcatagctcactttaagtattctttggatctctttattgggaa 27426462  T
Q  257 tcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctggacctactaattctaaaaccaacggaaggccagaagcata 356  Q
    || ||||||||| ||||||||||   || ||||||||||| ||||||||||||||    | ||| |||| ||||| ||| | ||||||||||||||||||    
T  27426463 tcttttcataccaatctaatgtattcttgcattcttctatgttctttccaaacaagttagaacccactatttctataactaccggaaggccagaagcata 27426562  T
Q  357 agc 359  Q
    |||    
T  27426563 agc 27426565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 159 - 377
Target Start/End: Original strand, 27717252 - 27717470
Alignment:
Q  159 tttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaatc 258  Q
    ||||||||||||||||||||| ||||| |||| ||| |  |||||||||||||||||| | |||| ||||||||| || |||||||||||||| ||||||    
T  27717252 tttgaagcaacaagcaatgtctagaaagacactttgctgctcttcctccaaagcatcataacttactttaagtatcttttggatctctttattgggaatc 27717351  T
Q  259 ctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctggacctactaattctaaaaccaacggaaggccagaagcataag 358  Q
    || ||||||| ||||||||||   |||||||| ||||| ||||||||| | ||    | ||| |||| ||||| ||| |||||||||||||||||||| |    
T  27717352 ctgtcatacccatctaatgtattcttccattcctctatgttctttccagataagttagaacccactatttctataactaacggaaggccagaagcatatg 27717451  T
Q  359 ctattgcacggtctaaaat 377  Q
    | | |||||||| ||||||    
T  27717452 caactgcacggtttaaaat 27717470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 56 - 386
Target Start/End: Complemental strand, 26885599 - 26885269
Alignment:
Q  56 taatctttatgagagttttttcgaccaacactccaatatgatattctatgcattgaccatgataagcacaaagaatatcttcaacctctcccaaatcata 155  Q
    ||||||||| ||||| |||||||||||||||||||| ||||| || |||||| || |||| || ||||  ||| |||||||| ||||||  | | | | |    
T  26885599 taatctttaagagagatttttcgaccaacactccaacatgatgttttatgcaatggccataatgagcatgaagtatatcttcgacctctgtccatttaca 26885500  T
Q  156 ccctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattagga 255  Q
    |||||||||||||||||| || || ||||| |||| ||| || |||||||| ||||||||| |||||| ||||||||| |  ||||||| | ||||||||    
T  26885499 ccctttgaagcaacaagctatatccagaaagacactttgctcctcttcctctaaagcatcatagcttactttaagtatctcttggatctttgtattagga 26885400  T
Q  256 atcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctgg-acctactaattctaaaaccaacggaaggccagaagca 354  Q
    ||| ||||||| | ||||| ||||   ||||||  ||||||  ||||||||||| ||| ||| ||| |||| ||||| ||| || |||||||| ||||||    
T  26885399 atcttttcatatccatctagtgtactcttccatgtttctatgctctttccaaac-aagttggaacccactatttctataactaaaggaaggcccgaagca 26885301  T
Q  355 taagctattgcacggtctaaaatgtcatcata 386  Q
    || |  | |||||||| |||||| || |||||    
T  26885300 tatgaaactgcacggtttaaaatctcttcata 26885269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 54 - 399
Target Start/End: Original strand, 28097091 - 28097436
Alignment:
Q  54 aataatctttatgagagttttttcgaccaacactccaatatgatattctatgcattgaccatgataagcacaaagaatatcttcaacctctcccaaatca 153  Q
    ||||||||| |  |||| |||||  |||||||||||||| ||||||   |||| |||||| | || ||||||||| |||||||| ||||||  ||| | |    
T  28097091 aataatcttcacaagagattttttaaccaacactccaatgtgatatctcatgcgttgaccgtaatgagcacaaagcatatcttccacctctttcaattta 28097190  T
Q  154 taccctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattag 253  Q
    |||||||||||||||||||||||||||||||||||||     || |||||||||||||||||||| || |    |||||| || || ||||||| | |||    
T  28097191 taccctttgaagcaacaagcaatgtcgagaaaaacactcctctcatcttcctccaaagcatcaaaactcacacgaagtattttttgaatctcttcactag 28097290  T
Q  254 gaatcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctgg-acctactaattctaaaaccaacggaaggccagaag 352  Q
    |||| |||||||| | ||| ||   ||| |||||||||||||||| ||||||| || ||| ||| ||||| || ||| ||  |||| |||||||||| ||    
T  28097291 gaattctttcatatcgatccaacaaagaattccattcttctatatgctttccatac-aagttggaacctaatatttccaaggccaatggaaggccagcag 28097389  T
Q  353 cataagctattgcacggtctaaaatgtcatcatagcttgaatcaact 399  Q
    |||||  ||||||||||| ||||||    ||||| ||||||||||||    
T  28097390 cataatttattgcacggtttaaaatacactcataacttgaatcaact 28097436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 157 - 380
Target Start/End: Complemental strand, 27680381 - 27680158
Alignment:
Q  157 cctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaa 256  Q
    ||||||||||| ||||| ||||| ||||| ||||  || || ||||| |||||||||||| |||| |  |||||||| || |||||||||||||| ||||    
T  27680381 cctttgaagcagcaagcgatgtcaagaaagacactctgctcctcttcttccaaagcatcatagctcaccttaagtatcttttggatctctttattgggaa 27680282  T
Q  257 tcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctggacctactaattctaaaaccaacggaaggccagaagcata 356  Q
    |||| ||||||| ||||||||||   ||||| ||||||||  |||||||||||||    | ||| |||| ||||||||| |||||||||||| |||||||    
T  27680281 tcctgtcatacccatctaatgtatgcttccaatcttctatgctctttccaaacaagttagaacccactacttctaaaactaacggaaggccaaaagcata 27680182  T
Q  357 agctattgcacggtctaaaatgtc 380  Q
     || | |||||||| |||||||||    
T  27680181 tgcaactgcacggtttaaaatgtc 27680158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 157 - 391
Target Start/End: Complemental strand, 26647910 - 26647676
Alignment:
Q  157 cctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaa 256  Q
    ||||||||||||||||||||||| ||||| ||||  || |  |||||||||||||||||| |||||| ||||||||| | |||||||| |||||| ||||    
T  26647910 cctttgaagcaacaagcaatgtctagaaagacactctgctgctcttcctccaaagcatcatagcttactttaagtatctcgtggatctttttattgggaa 26647811  T
Q  257 tcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctgg-acctactaattctaaaaccaacggaaggccagaagcat 355  Q
    || ||||||| | ||||||||||   ||||||||||||||  |||||||| |  ||| ||| ||| |||| ||||||||| || |||||||| |||||||    
T  26647810 tcttttcatatccatctaatgtacccttccattcttctatgctctttccata-taagttggaacccactatttctaaaactaagggaaggcctgaagcat 26647712  T
Q  356 aagctattgcacggtctaaaatgtcatcatagcttg 391  Q
    | |  | |||||||| ||||| ||| ||||| ||||    
T  26647711 atgaaactgcacggtttaaaacgtcttcataacttg 26647676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 157 - 391
Target Start/End: Complemental strand, 26753878 - 26753644
Alignment:
Q  157 cctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaa 256  Q
    ||||||||||||||||||||||| ||||| ||||  || |  |||||||||||||||||| |||||| ||||||||| | |||||||| |||||| ||||    
T  26753878 cctttgaagcaacaagcaatgtctagaaagacactctgctgctcttcctccaaagcatcatagcttactttaagtatctcgtggatctttttattgggaa 26753779  T
Q  257 tcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctgg-acctactaattctaaaaccaacggaaggccagaagcat 355  Q
    || ||||||| | ||||||||||   ||||||||||||||  |||||||| |  ||| ||| ||| |||| ||||||||| || |||||||| |||||||    
T  26753778 tcttttcatatccatctaatgtacccttccattcttctatgctctttccata-taagttggaacccactatttctaaaactaagggaaggcctgaagcat 26753680  T
Q  356 aagctattgcacggtctaaaatgtcatcatagcttg 391  Q
    | |  | |||||||| ||||| ||| ||||| ||||    
T  26753679 atgaaactgcacggtttaaaacgtcttcataacttg 26753644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 56 - 393
Target Start/End: Complemental strand, 26803978 - 26803641
Alignment:
Q  56 taatctttatgagagttttttcgaccaacactccaatatgatattctatgcattgaccatgataagcacaaagaatatcttcaacctctcccaaatcata 155  Q
    ||||||| ||||||| ||||||  |||||||||| | ||||| |  |||||| || |||| || | ||  ||| |||||||||| |||  || |  || |    
T  26803978 taatcttaatgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgaacatgaagtatatcttcaaactcctcccatccaca 26803879  T
Q  156 ccctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattagga 255  Q
     ||||||||||||||||||||||| ||||| ||||  || |  |||||||||||||||||| |||||| ||||||||| | |||||||| |||||| |||    
T  26803878 tcctttgaagcaacaagcaatgtctagaaagacactctgctgctcttcctccaaagcatcatagcttactttaagtatctcgtggatctttttattggga 26803779  T
Q  256 atcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctgg-acctactaattctaaaaccaacggaaggccagaagca 354  Q
    ||| ||||||| | ||||||||||   |||||||||| |||  ||||||||||| ||| ||| ||| ||||  |||||||| || ||||| || ||||||    
T  26803778 atcttttcatatccatctaatgtacccttccattcttttatgctctttccaaac-aagttggaacccactatctctaaaactaagggaagacctgaagca 26803680  T
Q  355 taagctattgcacggtctaaaatgtcatcatagcttgaa 393  Q
    || |  | |||||| | ||||||||| ||||| ||||||    
T  26803679 tatgaaactgcacgatttaaaatgtcttcataacttgaa 26803641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 156 - 376
Target Start/End: Complemental strand, 26863012 - 26862792
Alignment:
Q  156 ccctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattagga 255  Q
    ||||||||| ||||||||||| || ||||| |||| ||| |  ||||| |||||||||||| |||||| |||||||||  | |||||||||||||| |||    
T  26863012 ccctttgaaacaacaagcaatatctagaaagacactttgctgctcttcttccaaagcatcatagcttactttaagtatcctttggatctctttattggga 26862913  T
Q  256 atcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctggacctactaattctaaaaccaacggaaggccagaagcat 355  Q
    ||| ||||||||| |||||||||  ||| ||||||||| ||  |||||||||||||    | ||| |||| ||| | ||| ||||||||||| |||||||    
T  26862912 atcttttcatacccatctaatgtgcattgccattcttccatgctctttccaaacaagttagaacccactatttcgagaactaacggaaggccggaagcat 26862813  T
Q  356 aagctattgcacggtctaaaa 376  Q
    | || | |||||||| |||||    
T  26862812 atgcaactgcacggtttaaaa 26862792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 163 - 367
Target Start/End: Complemental strand, 28240778 - 28240578
Alignment:
Q  163 aagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaatccttt 262  Q
    |||||||||||||||||||||||||||| ||| || |||| |||||||||||||||    | ||||||||| || |||||||||||||| ||||||||||    
T  28240778 aagcaacaagcaatgtcgagaaaaacactttgctcatctttctccaaagcatcaaa----actttaagtatcttttggatctctttatttggaatccttt 28240683  T
Q  263 catacctatctaatgtagatttccattcttctatattctttccaaacaaagctgg-acctactaattctaaaaccaacggaaggccagaagcataagcta 361  Q
    |||||   |||||||| |||| ||||||| ||||||    ||||||| ||| ||| ||| |||| ||||||| | || || |||||||||||||||| ||    
T  28240682 catactggtctaatgtggattcccattctcctatatctaatccaaac-aagttggaaccaactacttctaaagctaatggtaggccagaagcataagtta 28240584  T
Q  362 ttgcac 367  Q
    ||||||    
T  28240583 ttgcac 28240578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 151 - 358
Target Start/End: Original strand, 28296485 - 28296692
Alignment:
Q  151 tcataccctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttat 250  Q
    ||||| ||||||||||| ||||| ||||| |||||||||  ||  || ||||||||||||||||||||||||| ||||||||| |  ||||||| | ||     
T  28296485 tcatatcctttgaagcagcaagcgatgtcaagaaaaacatttttctcatcttcctccaaagcatcaaagcttactttaagtatctcttggatctttctaa 28296584  T
Q  251 taggaatcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctgg-acctactaattctaaaaccaacggaaggccag 349  Q
    | ||  |||||||||||  |  ||||| |||||||||||||  |||||||||||||||| ||| ||| ||| |||| ||||||| |||| ||||||||||    
T  28296585 tgggtctcctttcatactgacttaatgcagatttccattctcttatattctttccaaac-aagttggaacccactacttctaaagccaatggaaggccag 28296683  T
Q  350 aagcataag 358  Q
    |||||||||    
T  28296684 aagcataag 28296692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 151 - 358
Target Start/End: Complemental strand, 28515588 - 28515381
Alignment:
Q  151 tcataccctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttat 250  Q
    ||||| ||||||||||| ||||| ||||| |||||||||  ||  || ||||||||||||||||||||||||| ||||||||| |  ||||||| | ||     
T  28515588 tcatatcctttgaagcagcaagcgatgtcaagaaaaacatttttctcatcttcctccaaagcatcaaagcttactttaagtatctcttggatctttctaa 28515489  T
Q  251 taggaatcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctgg-acctactaattctaaaaccaacggaaggccag 349  Q
    | ||  |||||||||||  |  ||||| |||||||||||||  |||||||||||||||| ||| ||| ||| |||| ||||||| |||| ||||||||||    
T  28515488 tgggtctcctttcatactgacttaatgcagatttccattctcttatattctttccaaac-aagttggaacccactacttctaaagccaatggaaggccag 28515390  T
Q  350 aagcataag 358  Q
    |||||||||    
T  28515389 aagcataag 28515381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 53 - 353
Target Start/End: Complemental strand, 26938564 - 26938264
Alignment:
Q  53 gaataatctttatgagagttttttcgaccaacactccaatatgatattctatgcattgaccatgataagcacaaagaatatcttcaacctctcccaaatc 152  Q
    |||||||||||||||||| ||| |  ||||||||||||| ||||| || |||||| ||||||| || ||||  |||  |||||||||||||  ||||       
T  26938564 gaataatctttatgagagatttattaaccaacactccaacatgattttttatgcaatgaccataatgagcatgaagtttatcttcaacctcagccaatct 26938465  T
Q  153 ataccctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttatta 252  Q
    | |||| ||||||||||| | ||| || ||||| |||| |||||| ||||| ||||||  ||||||||||| | ||||||| || || |  | |   |      
T  26938464 acacccattgaagcaacacgtaatatccagaaagacactttgttcttcttcatccaaacaatcaaagcttactctaagtatcttttgaacatgtccgtgt 26938365  T
Q  253 ggaatcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctggacctactaattctaaaaccaacggaaggccagaag 352  Q
    ||||||||||||||| || |||||||||||| ||||||| |||||  |||||||||||||   | |||||| | ||||||| | || |||||||||||||    
T  26938364 ggaatcctttcatacttagctaatgtagattcccattctgctatacactttccaaacaaatgggaacctacaacttctaaagctaatggaaggccagaag 26938265  T
Q  353 c 353  Q
    |    
T  26938264 c 26938264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 67 - 311
Target Start/End: Original strand, 27603365 - 27603609
Alignment:
Q  67 agagttttttcgaccaacactccaatatgatattctatgcattgaccatgataagcacaaagaatatcttcaacctctcccaaatcataccctttgaagc 166  Q
    |||| ||||||  |||||||||| | ||||| |  |||||| || |||| || ||||| ||| |||||||||||| || ||||  || | ||||||||||    
T  27603365 agagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagcacgaagtatatcttcaaccacttccaatccacatcctttgaagc 27603464  T
Q  167 aacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaatcctttcata 266  Q
    ||||||||||||| ||||| ||||  || |  |||||||||||||||||| |||||| |||||| || | |||||||| |||||| |||||| | |||||    
T  27603465 aacaagcaatgtctagaaagacactctgctgctcttcctccaaagcatcatagcttactttaagaatctcgtggatctttttattgggaatcttctcata 27603564  T
Q  267 cctatctaatgtagatttccattcttctatattctttccaaacaa 311  Q
     |  ||||| |||   ||||||||||||||  |||||||||||||    
T  27603565 tccttctaacgtacccttccattcttctatcctctttccaaacaa 27603609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 158 - 392
Target Start/End: Complemental strand, 26825249 - 26825015
Alignment:
Q  158 ctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaat 257  Q
    ||||||||||||||||||||||||| ||||||| |||||  ||||| |||||||||||| |||||| | ||||||| |  ||||||| ||| | ||||||    
T  26825249 ctttgaagcaacaagcaatgtcgaggaaaacactttgttgctcttcttccaaagcatcatagcttactctaagtatctcttggatctttttgtcaggaat 26825150  T
Q  258 cctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctggacctactaattctaaaaccaacggaaggccagaagcataa 357  Q
    ||||||||| | |||||||| |   ||||||  || |||  ||||||||||||||   | ||| |||| |||||| || || |||||||| ||||||||     
T  26825149 cctttcatatccatctaatgcacccttccatatttgtatgctctttccaaacaaattggaacccactatttctaatactaagggaaggcccgaagcatat 26825050  T
Q  358 gctattgcacggtctaaaatgtcatcatagcttga 392  Q
    |  | |||||||| ||||||||  ||||| |||||    
T  26825049 gaaactgcacggtttaaaatgtgttcataacttga 26825015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 155 - 279
Target Start/End: Original strand, 27530053 - 27530177
Alignment:
Q  155 accctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattagg 254  Q
    ||||||||||||||||||||||||| ||||| |||| ||| || |||| |||||||| |||| |||| | |||||||||  | |||||||||||||| ||    
T  27530053 accctttgaagcaacaagcaatgtctagaaagacactttgctcttctttctccaaagaatcatagctcactttaagtattctttggatctctttattggg 27530152  T
Q  255 aatcctttcatacctatctaatgta 279  Q
    |||   |||||||| ||||||||||    
T  27530153 aatttcttcatacccatctaatgta 27530177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 157 - 396
Target Start/End: Original strand, 27663965 - 27664204
Alignment:
Q  157 cctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaa 256  Q
    |||||||||||||||||||| || | ||| ||||  ||||  ||||| ||||||| ||||||||||| ||||||||| || ||||| |||| |   ||||    
T  27663965 cctttgaagcaacaagcaatatccaaaaagacactctgttgttcttcttccaaagtatcaaagcttactttaagtatcttttggatatcttcaggtggaa 27664064  T
Q  257 tcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctgg-acctactaattctaaaaccaacggaaggccagaagcat 355  Q
    | ||||||||| ||||||| || || |  || ||| ||||| ||||||||||| ||| ||| ||| |||| || |||| | || ||||||||||||||||    
T  27664065 ttctttcatacttatctaaggttgactcacaatctgctatactctttccaaac-aagttggaacccactacttttaaagctaatggaaggccagaagcat 27664163  T
Q  356 aagctattgcacggtctaaaatgtcatcatagcttgaatca 396  Q
    |  | | |||||||| |||||| | ||||||||| ||||||    
T  27664164 attcaactgcacggtttaaaatataatcatagctggaatca 27664204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 199 - 396
Target Start/End: Complemental strand, 25075256 - 25075059
Alignment:
Q  199 tcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaatcctttcatacctatctaatgtagatttccattcttctatat 298  Q
    ||||| |||||||| |||||||||| ||||||||| || ||||| |||| |   ||||| ||||||||| ||||||||||||| |  ||||||  | ||     
T  25075256 tcttcgtccaaagcgtcaaagcttactttaagtattttttggatatcttcaggtggaattctttcatacttatctaatgtagactcgcattctgttgtac 25075157  T
Q  299 tctttccaaacaaagctgg-acctactaattctaaaaccaacggaaggccagaagcataagctattgcacggtctaaaatgtcatcatagcttgaatca 396  Q
    || |||||||| ||| ||| ||| || | ||||||| | || |||||||||||||||||    |||||||||| |||||||| ||||||||||||||||    
T  25075156 tcattccaaac-aagttggaacccacaacttctaaagctaatggaaggccagaagcatatttaattgcacggtttaaaatgtaatcatagcttgaatca 25075059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 155 - 312
Target Start/End: Complemental strand, 27215885 - 27215728
Alignment:
Q  155 accctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattagg 254  Q
    ||||||||||||||||||||||||| ||||| ||||  |  || | |||||||| ||||||| |||| | |||||||||  | |||||||||||||| ||    
T  27215885 accctttgaagcaacaagcaatgtctagaaagacactcttctccttttcctccagagcatcatagctgactttaagtatcctttggatctctttattggg 27215786  T
Q  255 aatcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaa 312  Q
    |||| ||||||||  ||||||| ||  || ||| ||||||| | || |||||||||||    
T  27215785 aatcttttcatactcatctaatatacgttcccaatcttctacactccttccaaacaaa 27215728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 201 - 356
Target Start/End: Original strand, 25492114 - 25492269
Alignment:
Q  201 ttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaatcctttcatacctatctaatgtagatttccattcttctatattc 300  Q
    |||||||||||||||| |||| | | ||||||| || ||||||||||||||   |||| ||||||||  |||||||||| | ||||||||||||||  |     
T  25492114 ttcctccaaagcatcatagctcactctaagtatcttttggatctctttattgaaaatcttttcatactcatctaatgtacacttccattcttctatgcta 25492213  T
Q  301 tttccaaacaaagctggacctactaattctaaaaccaacggaaggccagaagcata 356  Q
    ||||||||||||  ||  |||| || | ||||| | || |||||||||||||||||    
T  25492214 tttccaaacaaatttgaccctattattactaaagctaatggaaggccagaagcata 25492269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 56 - 311
Target Start/End: Complemental strand, 26657494 - 26657239
Alignment:
Q  56 taatctttatgagagttttttcgaccaacactccaatatgatattctatgcattgaccatgataagcacaaagaatatcttcaacctctcccaaatcata 155  Q
    |||||| |||||||| |||||| ||||||||||||| ||||| || |||||| |||||||  | ||||  |||  | ||||| ||||| | |||   | |    
T  26657494 taatctctatgagagatttttcaaccaacactccaacatgatgttttatgcaatgaccatagtgagcaagaagtgtctcttcgacctcactcaatctaca 26657395  T
Q  156 ccctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattagga 255  Q
     ||||||||  ||||||| || || | ||| |||| ||| || |||||||||||| ||||| |||||| ||||||||| |  || |||| |||||| |||    
T  26657394 tcctttgaaaaaacaagctatatctaaaaagacactttgctcctcttcctccaaatcatcatagcttactttaagtatctcttgaatctttttattggga 26657295  T
Q  256 atcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaa 311  Q
    ||| ||||||| | ||||||||||   ||||||| ||| ||  |||||||||||||    
T  26657294 atcttttcatatccatctaatgtactcttccatttttcgatgctctttccaaacaa 26657239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 56 - 311
Target Start/End: Complemental strand, 26763465 - 26763210
Alignment:
Q  56 taatctttatgagagttttttcgaccaacactccaatatgatattctatgcattgaccatgataagcacaaagaatatcttcaacctctcccaaatcata 155  Q
    |||||| |||||||| |||||| ||||||||||||| ||||| || |||||| |||||||  | ||||  |||  | ||||| ||||| | |||   | |    
T  26763465 taatctctatgagagatttttcaaccaacactccaacatgatgttttatgcaatgaccatagtgagcaagaagtgtctcttcgacctcactcaatctaca 26763366  T
Q  156 ccctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattagga 255  Q
     ||||||||  ||||||| || || | ||| |||| ||| || |||||||||||| ||||| |||||| ||||||||| |  || |||| |||||| |||    
T  26763365 tcctttgaaaaaacaagctatatctaaaaagacactttgctcctcttcctccaaatcatcatagcttactttaagtatctcttgaatctttttattggga 26763266  T
Q  256 atcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaa 311  Q
    ||| ||||||| | ||||||||||   ||||||| ||| ||  |||||||||||||    
T  26763265 atcttttcatatccatctaatgtactcttccatttttcgatgctctttccaaacaa 26763210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 155 - 397
Target Start/End: Complemental strand, 26812961 - 26812719
Alignment:
Q  155 accctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattagg 254  Q
    ||||||| ||||||||  |||| || | ||||||||  | ||| ||||  ||||||||||||||||||| ||| | |||||| ||||| |||| |   ||    
T  26812961 accctttaaagcaacatacaatatccaaaaaaacactcttttcttctttgtccaaagcatcaaagcttactttgaatatattttggatatcttcaggtgg 26812862  T
Q  255 aatcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctgg-acctactaattctaaaaccaacggaaggccagaagc 353  Q
      ||||||||||| ||||||||||||||| ||| ||||| ||| ||||||||||| ||| ||| ||| |||| ||||| | | || |||||||||||||     
T  26812861 cgtcctttcatacttatctaatgtagattcccactcttcaatactctttccaaac-aagttggaacccactacttctatagctaatggaaggccagaagt 26812763  T
Q  354 ataagctattgcacggtctaaaatgtcatcatagcttgaatcaa 397  Q
    |||   || ||| || | |||||||| |||||| ||||||||||    
T  26812762 atattttactgcgcgatttaaaatgtaatcataacttgaatcaa 26812719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 199 - 396
Target Start/End: Complemental strand, 26850101 - 26849904
Alignment:
Q  199 tcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaatcctttcatacctatctaatgtagatttccattcttctatat 298  Q
    ||||| |||||||  ||| |||||||| ||||||| || || || |||  ||  ||||| ||||||||| ||||||||||||| |  ||||||||||||     
T  26850101 tcttcatccaaagagtcatagcttattctaagtatcttttgaatatctgcatgtggaattctttcatacttatctaatgtagactcgcattcttctatac 26850002  T
Q  299 tctttccaaacaaagctgg-acctactaattctaaaaccaacggaaggccagaagcataagctattgcacggtctaaaatgtcatcatagcttgaatca 396  Q
    ||||||||||| ||| ||| ||| |||| ||||||| | || |||||||||||||||||    | |||||| | |||||||| ||||||||||| ||||    
T  26850001 tctttccaaac-aagttggaacccactacttctaaagctaatggaaggccagaagcatatttaactgcacgatttaaaatgtaatcatagcttgcatca 26849904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 157 - 423
Target Start/End: Original strand, 27591772 - 27592038
Alignment:
Q  157 cctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaa 256  Q
    ||||||| |||||||||||| || | ||| ||||  || || ||||| |||||||||||| |||| | | ||||||| || ||||| |||||||  ||||    
T  27591772 cctttgatgcaacaagcaatatccaaaaagacactctgctcctcttcttccaaagcatcatagctgagtctaagtatcttttggatatctttatgtggaa 27591871  T
Q  257 tcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctggacctactaattctaaaaccaacggaaggccagaagcata 356  Q
    | ||| ||||| ||||||||||||| |  |||||| | ||| |||||||||||||    | ||| |||| |||||   | || |||||||||||||||||    
T  27591872 ttcttccatacttatctaatgtagactcacattctgcaatactctttccaaacaagttagaacccactacttctatcgctaatggaaggccagaagcata 27591971  T
Q  357 agctattgcacggtctaaaatgtcatcatagcttgaatcaactatactatttttaaaagctttccac 423  Q
      | | |||||| | ||||||||| ||||| ||||||  |||| |   |||||||||||| ||||||    
T  27591972 tacaactgcacgctttaaaatgtcttcataacttgaaggaactttctcatttttaaaagccttccac 27592038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 157 - 423
Target Start/End: Original strand, 27676371 - 27676637
Alignment:
Q  157 cctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaa 256  Q
    ||||||| |||||||||||| || | ||| ||||  || || ||||| |||||||||||| |||| | | ||||||| || ||||| |||||||  ||||    
T  27676371 cctttgatgcaacaagcaatatccaaaaagacactctgctcctcttcgtccaaagcatcatagctcagtctaagtatcttttggatatctttatgtggaa 27676470  T
Q  257 tcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctggacctactaattctaaaaccaacggaaggccagaagcata 356  Q
    | ||| ||||| ||||||||||||| |  |||||| | ||| |||||||||||||    | ||| |||| |||||   | || |||||||||||||||||    
T  27676471 ttcttccatacttatctaatgtagactcacattctgcaatactctttccaaacaagttagaacccactacttctatcgctaatggaaggccagaagcata 27676570  T
Q  357 agctattgcacggtctaaaatgtcatcatagcttgaatcaactatactatttttaaaagctttccac 423  Q
      | | |||||| | ||||||||| ||||| ||||||  |||| |   |||||||||||| ||||||    
T  27676571 tacaactgcacgctttaaaatgtcttcataacttgaaggaactttctcatttttaaaagccttccac 27676637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 63 - 312
Target Start/End: Complemental strand, 26144393 - 26144144
Alignment:
Q  63 tatgagagttttttcgaccaacactccaatatgatattctatgcattgaccatgataagcacaaagaatatcttcaacctctcccaaatcataccctttg 162  Q
    |||||||| ||||||  |||||||||||| ||||| ||||||||| || |||| || ||||  ||| || | || ||||| |  | | ||| ||||||||    
T  26144393 tatgagagatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttttttaacctttgtccattcacaccctttg 26144294  T
Q  163 aagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaatccttt 262  Q
    ||||||||||||||||| ||||| ||||  || || | ||||| |||||||||| |||||| || ||||||  | ||||| |||||||  |||||  |||    
T  26144293 aagcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatcctttggatatctttatcgggaatatttt 26144194  T
Q  263 catacctatctaatgtagatttccattcttctatattctttccaaacaaa 312  Q
    |||||   |||||||||   | ||| |||||||  ||| |||||||||||    
T  26144193 catactcgtctaatgtacgctcccaatcttctaccttccttccaaacaaa 26144144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 312
Target Start/End: Complemental strand, 25484494 - 25484335
Alignment:
Q  153 ataccctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttatta 252  Q
    ||||||||||||| ||||||||||||| ||||| ||||  || || | ||||| |||||||||| |||||| || ||||||  | ||||| |||||||      
T  25484494 ataccctttgaagtaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatcctttggatatctttatcg 25484395  T
Q  253 ggaatcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaa 312  Q
    |||||  ||||||||  ||||||||||   ||||| |||||||  ||| |||||||||||    
T  25484394 ggaatattttcatactcatctaatgtacgcttccaatcttctaccttccttccaaacaaa 25484335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 312
Target Start/End: Complemental strand, 25512326 - 25512167
Alignment:
Q  153 ataccctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttatta 252  Q
    ||||||||||||| ||||||||||||| ||||| ||||  || || | ||||| |||||||||| |||||| || ||||||  | ||||| |||||||      
T  25512326 ataccctttgaagtaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatcctttggatatctttatcg 25512227  T
Q  253 ggaatcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaa 312  Q
    |||||  ||||||||  ||||||||||   ||||| |||||||  ||| |||||||||||    
T  25512226 ggaatattttcatactcatctaatgtacgcttccaatcttctaccttccttccaaacaaa 25512167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 396
Target Start/End: Complemental strand, 26637076 - 26636838
Alignment:
Q  158 ctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaat 257  Q
    |||| ||| |||||||||| || | ||| ||||  ||||  ||||| |||||||| ||| |||| | |||||| || || ||||| |||| ||  |||||    
T  26637076 ctttaaagaaacaagcaatatctaaaaagacactctgttgttcttcatccaaagcgtcatagctaactttaagaatcttttggatatcttcatgtggaat 26636977  T
Q  258 cctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctgga-cctactaattctaaaaccaacggaaggccagaagcata 356  Q
     || |||||| ||||||||  ||| |  |||||| ||||| ||||||||||||| | |||| || |||| ||||||| | || |||||||||||||||||    
T  26636976 tctgtcatacttatctaataaagactcacattctgctatactctttccaaacaa-gttggaacccactacttctaaagctaatggaaggccagaagcata 26636878  T
Q  357 agctattgcacggtctaaaatgtcatcatagcttgaatca 396  Q
        | |||||||| |||||||| ||||||||||||||||    
T  26636877 tttaactgcacggtttaaaatgtaatcatagcttgaatca 26636838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 396
Target Start/End: Complemental strand, 26743042 - 26742804
Alignment:
Q  158 ctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaat 257  Q
    |||| ||| |||||||||| || | ||| ||||  ||||  ||||| |||||||| ||| |||| | |||||| || || ||||| |||| ||  |||||    
T  26743042 ctttaaagaaacaagcaatatctaaaaagacactctgttgttcttcatccaaagcgtcatagctaactttaagaatcttttggatatcttcatgtggaat 26742943  T
Q  258 cctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctgga-cctactaattctaaaaccaacggaaggccagaagcata 356  Q
     || |||||| ||||||||  ||| |  |||||| ||||| ||||||||||||| | |||| || |||| ||||||| | || |||||||||||||||||    
T  26742942 tctgtcatacttatctaataaagactcacattctgctatactctttccaaacaa-gttggaacccactacttctaaagctaatggaaggccagaagcata 26742844  T
Q  357 agctattgcacggtctaaaatgtcatcatagcttgaatca 396  Q
        | |||||||| |||||||| ||||||||||||||||    
T  26742843 tttaactgcacggtttaaaatgtaatcatagcttgaatca 26742804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 205 - 356
Target Start/End: Complemental strand, 26951126 - 26950975
Alignment:
Q  205 tccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaatcctttcatacctatctaatgtagatttccattcttctatattctttc 304  Q
    ||||||||||||||||||| ||||||||| || ||||| |||| ||  ||||| ||||||||| ||||||||  ||| |  |||||| ||||| ||||||    
T  26951126 tccaaagcatcaaagcttactttaagtatcttttggatatcttcatgtggaattctttcatacttatctaataaagactcacattctgctatagtctttc 26951027  T
Q  305 caaacaaagctggacctactaattctaaaaccaacggaaggccagaagcata 356  Q
    |||||||    | ||| |||| ||||||| | || |||||||||| ||||||    
T  26951026 caaacaagttagaacccactacttctaaagctaatggaaggccagcagcata 26950975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 206 - 396
Target Start/End: Complemental strand, 26960507 - 26960317
Alignment:
Q  206 ccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaatcctttcatacctatctaatgtagatttccattcttctatattctttcc 305  Q
    ||||||| ||| |||||| ||||||||| || ||||| |||| ||  ||||| || |||||| ||||||||  ||| |  |||||| ||||| |||| ||    
T  26960507 ccaaagcgtcatagcttactttaagtatcttttggatatcttcatgtggaattctgtcatacttatctaataaagactcacattctgctatactcttgcc 26960408  T
Q  306 aaacaaagctgga-cctactaattctaaaaccaacggaaggccagaagcataagctattgcacggtctaaaatgtcatcatagcttgaatca 396  Q
    |||||| | |||| || |||| ||||||| | || |||||||||||||||||    | |||||||| |||||||| ||||||||||||||||    
T  26960407 aaacaa-gttggaacccactacttctaaagctaatggaaggccagaagcatatttaactgcacggtttaaaatgtaatcatagcttgaatca 26960317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 205 - 348
Target Start/End: Complemental strand, 28228335 - 28228192
Alignment:
Q  205 tccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaatcctttcatacctatctaatgtagatttccattcttctatattctttc 304  Q
    ||||||| ||||||||||||||||||||| |    ||| | |||| | ||||||||||| | |  || ||||| ||||||||||||||| |||||||| |    
T  28228335 tccaaagtatcaaagcttattttaagtatctctatgatatttttaatgggaatcctttcttcctgatttaatgcagatttccattcttcaatattcttcc 28228236  T
Q  305 caaacaaagctggacctactaattctaaaaccaacggaaggcca 348  Q
    |||||||   || ||| |||| |||||||||||| |||| ||||    
T  28228235 caaacaagtttgaacccactacttctaaaaccaatggaatgcca 28228192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 370 - 423
Target Start/End: Complemental strand, 29823291 - 29823237
Alignment:
Q  370 tctaaaatgtcatcatagcttgaatcaactatactat-ttttaaaagctttccac 423  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||||||||    
T  29823291 tctaaaatgccaccatagcttgaatcaactatactattttttaaaagctttccac 29823237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 199 - 356
Target Start/End: Complemental strand, 26978769 - 26978612
Alignment:
Q  199 tcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaatcctttcatacctatctaatgtagatttccattcttctatat 298  Q
    ||||| ||||||||||||||||||| ||||||||| || ||||| | || |   ||||| ||| ||||| |||||||| |||| |  || ||| |||||     
T  26978769 tcttcgtccaaagcatcaaagcttactttaagtatcttttggatatgttcaggtggaattcttccatacttatctaatatagactcacactctgctatac 26978670  T
Q  299 tctttccaaacaaagctggacctactaattctaaaaccaacggaaggccagaagcata 356  Q
    |||||||||||||   || ||| |||| ||||||| | || ||||| |||||||||||    
T  26978669 tctttccaaacaagcttgaacccactacttctaaagctaatggaagaccagaagcata 26978612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 267
Target Start/End: Complemental strand, 26057355 - 26057243
Alignment:
Q  155 accctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattagg 254  Q
    ||||||||||||||||||||||||| ||||| ||||  || || | ||||| |||||||||| |||||| || ||||||  | ||||| |||||||  ||    
T  26057355 accctttgaagcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatcctttggatatctttatcggg 26057256  T
Q  255 aatcctttcatac 267  Q
    |||  ||||||||    
T  26057255 aatattttcatac 26057243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 267
Target Start/End: Complemental strand, 26077325 - 26077213
Alignment:
Q  155 accctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattagg 254  Q
    ||||||||||||||||||||||||| ||||| ||||  || || | ||||| |||||||||| |||||| || ||||||  | ||||| |||||||  ||    
T  26077325 accctttgaagcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatcctttggatatctttatcggg 26077226  T
Q  255 aatcctttcatac 267  Q
    |||  ||||||||    
T  26077225 aatattttcatac 26077213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 227 - 311
Target Start/End: Original strand, 27336916 - 27337000
Alignment:
Q  227 taagtatattgtggatctctttattaggaatcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaa 311  Q
    ||||||| || || ||||||||||| |||||||| ||||||| |||||||||    |||||| ||||||| ||||||||||||||    
T  27336916 taagtatcttttgtatctctttattgggaatcctgtcatacccatctaatgtgttcttccatacttctatgttctttccaaacaa 27337000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 227 - 311
Target Start/End: Original strand, 27397656 - 27397740
Alignment:
Q  227 taagtatattgtggatctctttattaggaatcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaa 311  Q
    ||||||| || || ||||||||||| |||||||| ||||||| |||||||||    |||||| ||||||| ||||||||||||||    
T  27397656 taagtatcttttgtatctctttattgggaatcctgtcatacccatctaatgtgttcttccatacttctatgttctttccaaacaa 27397740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 277
Target Start/End: Complemental strand, 29469643 - 29469523
Alignment:
Q  157 cctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaa 256  Q
    ||||||||||| || |||||||| |||||||||   |  || ||||||| ||||||||||||||| | ||  |||||  | ||||||| ||||| |||||    
T  29469643 cctttgaagcagcaggcaatgtcaagaaaaacagacttctcttcttcctgcaaagcatcaaagctaagttgtagtatcgtttggatctttttatcaggaa 29469544  T
Q  257 tcctttcatacctatctaatg 277  Q
    |||||||||| | ||||||||    
T  29469543 tcctttcataacgatctaatg 29469523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 480 - 568
Target Start/End: Complemental strand, 28326579 - 28326488
Alignment:
Q  480 tgacttgttagcaaatgttggtctcga---gtaatgatcactctgctaccaggaccaaaccagtcaagtccgcccgccataacttgcaattg 568  Q
    |||||| |||||||||||| |||||||   |||| ||||||||| || |||||||| ||||| |||||||| || |||| ||| ||||||||    
T  28326579 tgactttttagcaaatgtttgtctcgagtggtaacgatcactctactgccaggaccgaaccaatcaagtcctccagccaaaacctgcaattg 28326488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 480 - 568
Target Start/End: Complemental strand, 28504215 - 28504124
Alignment:
Q  480 tgacttgttagcaaatgttggtctcga---gtaatgatcactctgctaccaggaccaaaccagtcaagtccgcccgccataacttgcaattg 568  Q
    |||||| |||||||||||| |||||||   |||| ||||||||| || |||||||| ||||| |||||||| || |||| ||| ||||||||    
T  28504215 tgactttttagcaaatgtttgtctcgagtggtaacgatcactctactgccaggaccgaaccaatcaagtcctccagccaaaacctgcaattg 28504124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 342 - 378
Target Start/End: Complemental strand, 29824005 - 29823969
Alignment:
Q  342 aaggccagaagcataagctattgcacggtctaaaatg 378  Q
    |||| ||||||||||||||||||||||||||||||||    
T  29824005 aaggtcagaagcataagctattgcacggtctaaaatg 29823969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 97
Target Start/End: Complemental strand, 2186360 - 2186317
Alignment:
Q  54 aataatctttatgagagttttttcgaccaacactccaatatgat 97  Q
    ||||||||||||||| | |||||| |||||||||||||||||||    
T  2186360 aataatctttatgagtgatttttcaaccaacactccaatatgat 2186317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 233
Target Start/End: Complemental strand, 28182567 - 28182464
Alignment:
Q  130 atatcttcaacctctcccaaatcataccctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaa 229  Q
    ||||||||||| |||  ||||||||| ||||| ||| |||||| |||||| |||||||||   || || || ||||||| ||||||| |||| | |||||    
T  28182567 atatcttcaacttctttcaaatcatatccttttaagaaacaagaaatgtccagaaaaacattctgctcatcatcctccagagcatcatagctaactttaa 28182468  T
Q  230 gtat 233  Q
    ||||    
T  28182467 gtat 28182464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 28150690 - 28150644
Alignment:
Q  79 accaacactccaatatgatattctatgcattgaccatgataagcaca 125  Q
    ||||||||||||||||||||||  ||||||||||||| || ||||||    
T  28150690 accaacactccaatatgatatttcatgcattgaccataatgagcaca 28150644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 479 - 568
Target Start/End: Complemental strand, 28235667 - 28235575
Alignment:
Q  479 atgacttgttagcaaatgttggtctcgagt---aatgatcactctgctaccaggaccaaaccagtcaagtccgcccgccataacttgcaattg 568  Q
    |||||||| |||||| |||| |||||||||   |||||||||| | || |||||||||||||| |||| | | ||||||| ||| ||||||||    
T  28235667 atgacttgctagcaattgtttgtctcgagtggtaatgatcactttacttccaggaccaaaccaatcaatttctcccgccaaaacctgcaattg 28235575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 479 - 568
Target Start/End: Complemental strand, 28243897 - 28243805
Alignment:
Q  479 atgacttgttagcaaatgttggtctcgagt---aatgatcactctgctaccaggaccaaaccagtcaagtccgcccgccataacttgcaattg 568  Q
    ||||||| |||||||||||  |||||||||   || ||||||||| ||||||||||| ||||| |||||||| || || | ||| ||||||||    
T  28243897 atgactttttagcaaatgtctgtctcgagtggtaacgatcactctactaccaggaccgaaccaatcaagtcctccagctaaaacctgcaattg 28243805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 568
Target Start/End: Complemental strand, 28182189 - 28182128
Alignment:
Q  507 gtaatgatcactctgctaccaggaccaaaccagtcaagtccgcccgccataacttgcaattg 568  Q
    |||||||||||| | ||||||||||||||||| |||| ||| || |||| ||| ||||||||    
T  28182189 gtaatgatcactttactaccaggaccaaaccaatcaattcctccagccaaaacctgcaattg 28182128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 216; Significance: 1e-118; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 594 - 817
Target Start/End: Original strand, 30269993 - 30270216
Alignment:
Q  594 taatcttaataatcatacctcaggtccacctgtcattgtaaagtacaagcctttcacaggatggtttgccaaagccataggttccactggcccaatcgaa 693  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  30269993 taatcttaataatcatacctcaggtccacctgtcattgtaaagtacaagcctttcacaggatggtttgccaaagccataggttccactggcccaatcaaa 30270092  T
Q  694 ttggatatgacaacacttgaatttctcaaggtatcatagatatgtttagcaactgcccgcaaaacatgtttatatatagcaagctcaagcatttcaaaaa 793  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  30270093 ttggatatgacaacacttgaatttctcaaggtatcatagatatgtttagcaactgcctgcaaaacatgtttatatatagcaagctcaagcatttcaaaaa 30270192  T
Q  794 catgaaaaataaataaaggacttg 817  Q
    ||||||||||||||||||||||||    
T  30270193 catgaaaaataaataaaggacttg 30270216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 594 - 817
Target Start/End: Complemental strand, 30282196 - 30281973
Alignment:
Q  594 taatcttaataatcatacctcaggtccacctgtcattgtaaagtacaagcctttcacaggatggtttgccaaagccataggttccactggcccaatcgaa 693  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  30282196 taatcttaataatcatacctcaggtccacctgtcattgtaaagtacaagcctttcacaggatggtttgccaaagccataggttccactggcccaatcaaa 30282097  T
Q  694 ttggatatgacaacacttgaatttctcaaggtatcatagatatgtttagcaactgcccgcaaaacatgtttatatatagcaagctcaagcatttcaaaaa 793  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  30282096 ttggatatgacaacacttgaatttctcaaggtatcatagatatgtttagcaactgcctgcaaaacatgtttatatatagcaagctcaagcatttcaaaaa 30281997  T
Q  794 catgaaaaataaataaaggacttg 817  Q
    ||||||||||||||||||||||||    
T  30281996 catgaaaaataaataaaggacttg 30281973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 160; E-Value: 8e-85
Query Start/End: Original strand, 609 - 817
Target Start/End: Original strand, 30302340 - 30302550
Alignment:
Q  609 tacctcaggtccacctgtcattgtaaagtacaagcctttcacaggatggtttgccaaagccataggttccactggcccaatcgaattggatatgacaaca 708  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  30302340 tacctcaggtccaccggtcattgtaaagtacaagcctttaacaggatggtttgccaaagccataggttccactggcccaatcaaattggatattacaaca 30302439  T
Q  709 cttgaatttctcaaggtatcatagatatgtttagcaactgcccgc--aaaacatgtttatatatagcaagctcaagcatttcaaaaacatgaaaaataaa 806  Q
    ||||| |||||||| ||| ||||||||||||||||||| ||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30302440 cttgagtttctcaatgtaccatagatatgtttagcaacagcctgcttaaaacatgtttatatatagcaagctcaagcatttcaaaaacatgaaaaataaa 30302539  T
Q  807 taaaggacttg 817  Q
    |||| ||||||    
T  30302540 taaaagacttg 30302550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 57 - 423
Target Start/End: Original strand, 5089601 - 5089967
Alignment:
Q  57 aatctttatgagagttttttcgaccaacactccaatatgatattctatgcattgaccatgataagcacaaagaatatcttcaacctctcccaaatcatac 156  Q
    |||||||||||||| ||| || ||||||  ||| ||||||||||  ||||| | ||||| || ||||||||| |||| ||| |||||  ||||   |||     
T  5089601 aatctttatgagagatttatcaaccaactttcctatatgatatttcatgcaataaccataatgagcacaaagtatatattcgacctcatccaagctatat 5089700  T
Q  157 cctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaa 256  Q
    |||||||| ||||||||||||||||| |||||||  || || | |||  | |||  || |||||| | | ||||||| || ||||| |||||||||||||    
T  5089701 cctttgaaacaacaagcaatgtcgaggaaaacactctgctcatattcacctaaattattaaagctcactataagtatcttttggatttctttattaggaa 5089800  T
Q  257 tcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctggacctactaattctaaaaccaacggaaggccagaagcata 356  Q
    |||||||||||  ||||| |  ||||||||||| |||||||| |||||||||||||   | ||| || | ||||||| |||| |||||||||||||||||    
T  5089801 tcctttcatactcatctagtaaagatttccatttttctatatcctttccaaacaaattggaacccacaacttctaaagccaatggaaggccagaagcata 5089900  T
Q  357 agctattgcacggtctaaaatgtcatcatagcttgaatcaactatactatttttaaaagctttccac 423  Q
    || ||   |||||| ||||||  | ||||| |||| || |||  |||||||||||||||| ||||||    
T  5089901 agttaccacacggtttaaaattccttcataacttggattaacagtactatttttaaaagccttccac 5089967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 157 - 359
Target Start/End: Complemental strand, 18075192 - 18074990
Alignment:
Q  157 cctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaa 256  Q
    ||||||||||||||||||||||| ||||| |||| ||| || ||||||||||||| |||| |||| | |||||||||  | |||||||||||||| ||||    
T  18075192 cctttgaagcaacaagcaatgtctagaaagacactttgctcctcttcctccaaagaatcatagctcactttaagtattctttggatctctttattgggaa 18075093  T
Q  257 tcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctggacctactaattctaaaaccaacggaaggccagaagcata 356  Q
    || ||||||||| ||||||||||   || ||||||||||| ||||||||||||||    | ||| |||| ||||| ||| | ||||||||||||||||||    
T  18075092 tcttttcataccaatctaatgtattcttgcattcttctatgttctttccaaacaagttagaacccactatttctataactaccggaaggccagaagcata 18074993  T
Q  357 agc 359  Q
    |||    
T  18074992 agc 18074990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 609 - 760
Target Start/End: Original strand, 30262357 - 30262508
Alignment:
Q  609 tacctcaggtccacctgtcattgtaaagtacaagcctttcacaggatggtttgccaaagccataggttccactggcccaatcgaattggatatgacaaca 708  Q
    |||||||||| |||| | |||| |||| ||||||||||| || |||||||||||||||||||||||||||||||| |||||  ||||||| ||||||||     
T  30262357 tacctcaggtgcaccagacattataaaatacaagcctttaactggatggtttgccaaagccataggttccactggaccaattaaattggacatgacaacg 30262456  T
Q  709 cttgaatttctcaaggtatcatagatatgtttagcaactgcccgcaaaacat 760  Q
    ||||| |||||||| ||| |||| | |||||||||||||||| |||| ||||    
T  30262457 cttgagtttctcaatgtaccatatagatgtttagcaactgcctgcaacacat 30262508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 157 - 393
Target Start/End: Original strand, 18654224 - 18654460
Alignment:
Q  157 cctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaa 256  Q
    ||||||||  |||||||||| || | ||| |||| |||||  ||||| |||||||||||||| |||| ||||||||| || ||||| |||| ||  ||||    
T  18654224 cctttgaacaaacaagcaatatccaaaaagacactttgttgttcttcatccaaagcatcaaaacttactttaagtatcttttggatatcttcatgtggaa 18654323  T
Q  257 tcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctgg-acctactaattctaaaaccaacggaaggccagaagcat 355  Q
    | ||||||||| |||||||||||||||  |||||| | ||| ||||||||||| ||| ||| ||| || | ||||| | | || ||||||||||||||||    
T  18654324 ttctttcatacttatctaatgtagattcacattctgcaatactctttccaaac-aagttggaacccacgacttctatagctaatggaaggccagaagcat 18654422  T
Q  356 aagctattgcacggtctaaaatgtcatcatagcttgaa 393  Q
    | || | |||||||| |||||| || ||||| ||||||    
T  18654423 acgcaactgcacggtttaaaatctcttcataacttgaa 18654460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 157 - 393
Target Start/End: Original strand, 18722832 - 18723068
Alignment:
Q  157 cctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaa 256  Q
    ||||||||| |||||||||| || | ||| |||| |||||  |||||  |||||||||||||||||| ||||||||| || ||||| |||| ||  ||||    
T  18722832 cctttgaagaaacaagcaatatccaaaaagacactttgttgttcttcgcccaaagcatcaaagcttactttaagtatcttttggatatcttcatctggaa 18722931  T
Q  257 tcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctgg-acctactaattctaaaaccaacggaaggccagaagcat 355  Q
    | ||||||||| ||||||||||||| |  |||||| | ||| ||||||||||| ||| ||| ||| |||| ||||| | | || ||||||||||||||||    
T  18722932 ttctttcatacatatctaatgtagactcacattctgcaatactctttccaaac-aagttggaacccactacttctatagctaatggaaggccagaagcat 18723030  T
Q  356 aagctattgcacggtctaaaatgtcatcatagcttgaa 393  Q
    | || | ||| |||| |||||| || ||||| ||||||    
T  18723031 acgcaactgctcggtttaaaatctcttcataacttgaa 18723068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 157 - 393
Target Start/End: Original strand, 18678307 - 18678543
Alignment:
Q  157 cctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaa 256  Q
    ||||||||| |||||||||| || | ||| |||  |||||  ||||| ||||||||||||||||||| ||||||||| || ||||| |||| ||  ||||    
T  18678307 cctttgaagaaacaagcaatatccaaaaagacaatttgttgttcttcgtccaaagcatcaaagcttactttaagtatcttttggatatcttcatgtggaa 18678406  T
Q  257 tcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctgg-acctactaattctaaaaccaacggaaggccagaagcat 355  Q
    | ||||||||| ||||||||||||| |  ||||||   ||||||||||||||| ||| ||| ||| |||| ||||| | | || ||||||||||||||||    
T  18678407 ttctttcatacttatctaatgtagactcacattctgaaatattctttccaaac-aagttggaacccactacttctatagctaatggaaggccagaagcat 18678505  T
Q  356 aagctattgcacggtctaaaatgtcatcatagcttgaa 393  Q
    |  | | |||||| | |||||| || ||||| ||||||    
T  18678506 acacaactgcacgttttaaaatctcttcataacttgaa 18678543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 157 - 393
Target Start/End: Original strand, 18688373 - 18688609
Alignment:
Q  157 cctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaa 256  Q
    ||||||||| |||||||||| || | ||| |||| |||||  ||||| ||||||||||||||||||| ||||||||| || ||||| ||||  || ||||    
T  18688373 cctttgaagaaacaagcaatatccaaaaagacactttgttgttcttcgtccaaagcatcaaagcttactttaagtatcttttggatatcttcgtttggaa 18688472  T
Q  257 tcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctgg-acctactaattctaaaaccaacggaaggccagaagcat 355  Q
    | |||| |||| ||||||||||||| |  ||||||   ||| ||||||||||| ||| ||| ||| |||| ||||| | | || ||||||||||||||||    
T  18688473 ttctttgatacttatctaatgtagactcacattctgaaatactctttccaaac-aagttggaacccactacttctatagctaatggaaggccagaagcat 18688571  T
Q  356 aagctattgcacggtctaaaatgtcatcatagcttgaa 393  Q
    |  | | |||||||| |||||| || ||||| ||||||    
T  18688572 acacgactgcacggtttaaaatctcttcataacttgaa 18688609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 157 - 356
Target Start/End: Original strand, 18698147 - 18698346
Alignment:
Q  157 cctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaa 256  Q
    ||||||||| |||||||||| || | ||| |||| |||||  ||||| ||||||||||||||||||| ||||||||| || ||||| |||| ||  ||||    
T  18698147 cctttgaagaaacaagcaatatccaaaaagacactttgttgttcttcgtccaaagcatcaaagcttactttaagtatcttttggatatcttcatgtggaa 18698246  T
Q  257 tcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctgg-acctactaattctaaaaccaacggaaggccagaagcat 355  Q
    | ||||||||| ||||||||||||| |  |||||| | | | ||||||||||| ||| ||| ||| |||| ||||| | | || ||||||||||||||||    
T  18698247 ttctttcatacttatctaatgtagagtcacattctgcaaaactctttccaaac-aagttggaacccactacttctagagctaatggaaggccagaagcat 18698345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 157 - 356
Target Start/End: Original strand, 18730251 - 18730450
Alignment:
Q  157 cctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaa 256  Q
    ||||||||| |||||||||| || | ||| |||| |||||  ||||| ||||||||||||||||||| ||||||||| || ||||| |||| ||  ||||    
T  18730251 cctttgaagaaacaagcaatatccaaaaagacactttgttgttcttcgtccaaagcatcaaagcttactttaagtatcttttggatatcttcatgtggaa 18730350  T
Q  257 tcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctgg-acctactaattctaaaaccaacggaaggccagaagcat 355  Q
    | ||||||||| ||||||||||||| |  |||||| | | | ||||||||||| ||| ||| ||| |||| ||||| | | || ||||||||||||||||    
T  18730351 ttctttcatacttatctaatgtagaatcacattctgcaaaactctttccaaac-aagttggaacccactacttctagagctaatggaaggccagaagcat 18730449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 104; Significance: 2e-51; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 56 - 358
Target Start/End: Complemental strand, 16692399 - 16692097
Alignment:
Q  56 taatctttatgagagttttttcgaccaacactccaatatgatattctatgcattgaccatgataagcacaaagaatatcttcaacctctcccaaatcata 155  Q
    |||||||||| || | |||||| ||||| ||||||||||| |||| |||||||| ||||| || ||||||||| |||   ||||| ||   |||||||||    
T  16692399 taatctttataagggatttttcaaccaatactccaatatggtattttatgcatttaccataatgagcacaaagtataaactcaacttccgtcaaatcata 16692300  T
Q  156 ccctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattagga 255  Q
     ||||||||||||||||||||||| | ||||||||  | ||| ||||||||||||  |||||| |||| ||||||||| ||||| ||   ||||  ||||    
T  16692299 tcctttgaagcaacaagcaatgtccaaaaaaacactcttttcatcttcctccaaactatcaaaacttactttaagtattttgtgaattcgtttaccagga 16692200  T
Q  256 atcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctgga-cctactaattctaaaaccaacggaaggccagaagca 354  Q
    |||| |||||| | ||| |||||||||||||||||||||||||||||||||||||| | | || ||||||| ||||||| | || |||||||||||||||    
T  16692199 atccattcatatcgatcaaatgtagatttccattcttctatattctttccaaacaa-gttagatcctactacttctaaagctaatggaaggccagaagca 16692101  T
Q  355 taag 358  Q
    ||||    
T  16692100 taag 16692097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 5e-49; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 67 - 357
Target Start/End: Complemental strand, 3281180 - 3280890
Alignment:
Q  67 agagttttttcgaccaacactccaatatgatattctatgcattgaccatgataagcacaaagaatatcttcaacctctcccaaatcataccctttgaagc 166  Q
    ||||||||||  ||||| ||||||||||||||||  ||||||||||| | || | || |||| |||||||| | || |   |  | ||||||||| ||||    
T  3281180 agagtttttttaaccaaaactccaatatgatatttcatgcattgaccgtaatgatcagaaagcatatcttccatctgttttaggttataccctttaaagc 3281081  T
Q  167 aacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaatcctttcata 266  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||| || | ||||||||| || || ||||||||||||||||||||||||||    
T  3281080 aacaagcaatgtcgagaaaaacactttgctcgtcttcctccaaagcatcaaaactcactttaagtatcttctgaatctctttattaggaatcctttcata 3280981  T
Q  267 cctatctaatgtagatttccattcttctatattctttccaaacaaagctgg-acctactaattctaaaaccaacggaaggccagaagcataa 357  Q
     | ||| ||   ||| ||||| |||| |||||||||||||||| ||| ||| ||||| || ||||||  |||| ||||||||||||||||||    
T  3280980 tcgatccaacaaagaattccactcttttatattctttccaaac-aagttggaacctaatacttctaatgccaatggaaggccagaagcataa 3280890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 311
Target Start/End: Original strand, 17991967 - 17992120
Alignment:
Q  158 ctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaat 257  Q
    ||||||||||||||||||| || | ||| ||||  | ||  ||||| |||| |||||||||||||||||| |||||||| ||||| |||| |   || ||    
T  17991967 ctttgaagcaacaagcaatatccaaaaagacactcttttgttcttcatccagagcatcaaagcttatttttagtatattttggatatcttcaggtggtat 17992066  T
Q  258 cctttcatacctatctaatgtagatttccattcttctatattctttccaaacaa 311  Q
    |||||||||| |||| |||| | ||||||| ||| ||| |  ||||||||||||    
T  17992067 cctttcatacttatccaatgcacatttccaatctgctaaacactttccaaacaa 17992120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 98; Significance: 8e-48; HSPs: 5)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 58 - 367
Target Start/End: Complemental strand, 44487 - 44178
Alignment:
Q  58 atctttatgagagttttttcgaccaacactccaatatgatattctatgcattgaccatgataagcacaaagaatatcttcaacctctcccaaatcatacc 157  Q
    ||||||||||||| ||||||  ||||||| |  || |||||||  ||||| | ||||| || |||| |||| ||||||||||  |||  ||||| ||| |    
T  44487 atctttatgagagatttttcatccaacacactgatttgatatttcatgcagttaccataatgagcataaagtatatcttcaagttctttcaaattatatc 44388  T
Q  158 ctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaat 257  Q
    |||||||||| |||||||||||||||||||||   || || |||| |||||||||||||||||||| ||||||||| |  || |||| |||| | |||||    
T  44387 ctttgaagcagcaagcaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctcctgtatctttttaatcggaat 44288  T
Q  258 cctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctggacctactaattctaaaaccaacggaaggccagaagcataa 357  Q
    ||||  ||||| |||||||| ||||||||||||| ||||||| |||||||| ||   || ||| |||| ||||||| |||| ||||||||||||||||||    
T  44287 ccttctataccgatctaatgcagatttccattctcctatattatttccaaataagtttgaacccactacttctaaagccaatggaaggccagaagcataa 44188  T
Q  358 gctattgcac 367  Q
    | || |||||    
T  44187 gttactgcac 44178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 163 - 367
Target Start/End: Complemental strand, 40940 - 40740
Alignment:
Q  163 aagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaatccttt 262  Q
    |||||||||||||||||||||||||||| ||| || |||| |||||||||||||||    | ||||||||| || |||||||||||||| ||||||||||    
T  40940 aagcaacaagcaatgtcgagaaaaacactttgctcatctttctccaaagcatcaaa----actttaagtatcttttggatctctttatttggaatccttt 40845  T
Q  263 catacctatctaatgtagatttccattcttctatattctttccaaacaaagctgg-acctactaattctaaaaccaacggaaggccagaagcataagcta 361  Q
    |||||   |||||||| |||| ||||||| ||||||    ||||||| ||| ||| ||| |||| ||||||| | || || |||||||||||||||| ||    
T  40844 catactggtctaatgtggattcccattctcctatatctaatccaaac-aagttggaaccaactacttctaaagctaatggtaggccagaagcataagtta 40746  T
Q  362 ttgcac 367  Q
    ||||||    
T  40745 ttgcac 40740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 205 - 348
Target Start/End: Complemental strand, 28833 - 28690
Alignment:
Q  205 tccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaatcctttcatacctatctaatgtagatttccattcttctatattctttc 304  Q
    ||||||| ||||||||||||||||||||| |    ||| | |||| | ||||||||||| | |  || ||||| ||||||||||||||| |||||||| |    
T  28833 tccaaagtatcaaagcttattttaagtatctctatgatatttttaatgggaatcctttcttcctgatttaatgcagatttccattcttcaatattcttcc 28734  T
Q  305 caaacaaagctggacctactaattctaaaaccaacggaaggcca 348  Q
    |||||||   || ||| |||| |||||||||||| |||| ||||    
T  28733 caaacaagtttgaacccactacttctaaaaccaatggaatgcca 28690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 479 - 568
Target Start/End: Complemental strand, 35829 - 35737
Alignment:
Q  479 atgacttgttagcaaatgttggtctcgagt---aatgatcactctgctaccaggaccaaaccagtcaagtccgcccgccataacttgcaattg 568  Q
    |||||||| |||||| |||| |||||||||   |||||||||| | || |||||||||||||| |||| | | ||||||| ||| ||||||||    
T  35829 atgacttgctagcaattgtttgtctcgagtggtaatgatcactttacttccaggaccaaaccaatcaatttctcccgccaaaacctgcaattg 35737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 479 - 568
Target Start/End: Complemental strand, 44059 - 43967
Alignment:
Q  479 atgacttgttagcaaatgttggtctcgagt---aatgatcactctgctaccaggaccaaaccagtcaagtccgcccgccataacttgcaattg 568  Q
    ||||||| |||||||||||  |||||||||   || ||||||||| ||||||||||| ||||| |||||||| || || | ||| ||||||||    
T  44059 atgactttttagcaaatgtctgtctcgagtggtaacgatcactctactaccaggaccgaaccaatcaagtcctccagctaaaacctgcaattg 43967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 83; Significance: 7e-39; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 159 - 377
Target Start/End: Original strand, 2292 - 2510
Alignment:
Q  159 tttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaatc 258  Q
    ||||||||||||||||||||| ||||| |||| ||| |  |||||||||||||||||| | |||| ||||||||| || |||||||||||||| ||||||    
T  2292 tttgaagcaacaagcaatgtctagaaagacactttgctgctcttcctccaaagcatcataacttactttaagtatcttttggatctctttattgggaatc 2391  T
Q  259 ctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctggacctactaattctaaaaccaacggaaggccagaagcataag 358  Q
    || ||||||| ||||||||||   |||||||| ||||| ||||||||| | ||    | ||| |||| ||||| ||| |||||||||||||||||||| |    
T  2392 ctgtcatacccatctaatgtattcttccattcctctatgttctttccagataagttagaacccactatttctataactaacggaaggccagaagcatatg 2491  T
Q  359 ctattgcacggtctaaaat 377  Q
    | | |||||||| ||||||    
T  2492 caactgcacggtttaaaat 2510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 83; Significance: 7e-39; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 157 - 359
Target Start/End: Complemental strand, 61000 - 60798
Alignment:
Q  157 cctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaa 256  Q
    ||||||||||||||||||||||| ||||| |||| ||| || ||||||||||||| |||| |||| | |||||||||  | |||||||||||||| ||||    
T  61000 cctttgaagcaacaagcaatgtctagaaagacactttgctcctcttcctccaaagaatcatagctcactttaagtattctttggatctctttattgggaa 60901  T
Q  257 tcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctggacctactaattctaaaaccaacggaaggccagaagcata 356  Q
    || ||||||||| ||||||||||   || ||||||||||| ||||||||||||||    | ||| |||| ||||| ||| | ||||||||||||||||||    
T  60900 tcttttcataccaatctaatgtattcttgcattcttctatgttctttccaaacaagttagaacccactatttctataactaccggaaggccagaagcata 60801  T
Q  357 agc 359  Q
    |||    
T  60800 agc 60798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1870 (Bit Score: 82; Significance: 3e-38; HSPs: 1)
Name: scaffold1870
Description:

Target: scaffold1870; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 56 - 356
Target Start/End: Complemental strand, 301 - 1
Alignment:
Q  56 taatctttatgagagttttttcgaccaacactccaatatgatattctatgcattgaccatgataagcacaaagaatatcttcaacctctcccaaatcata 155  Q
    ||||||| | ||||| ||||||  |||||||||| | ||||| || |||||| || |||| || |||||  || |||||||||| |||   | |  || |    
T  301 taatcttaacgagagatttttcagccaacactcctagatgatgttttatgcaatggccataatgagcacgtagtatatcttcaaactccttccatccaca 202  T
Q  156 ccctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattagga 255  Q
     |||||||||||||| |||||||| |||||||||| ||| |  |||||||||||||||||| |||||| ||||||||| | |||||||| |||||| |||    
T  201 tcctttgaagcaacaggcaatgtctagaaaaacactttgctgctcttcctccaaagcatcatagcttactttaagtatctcgtggatctttttattggga 102  T
Q  256 atcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctgg-acctactaattctaaaaccaacggaaggccagaagca 354  Q
    ||| ||||||| | ||||||||||   ||||||||||||||  ||||||||||| ||| ||| ||| |||| ||||||||| || |||||||| ||||||    
T  101 atcttttcatatccatctaatgtacccttccattcttctatcgtctttccaaac-aagttggaacccactatttctaaaactaagggaaggcccgaagca 3  T
Q  355 ta 356  Q
    ||    
T  2 ta 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 82; Significance: 3e-38; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 157 - 393
Target Start/End: Original strand, 3463 - 3699
Alignment:
Q  157 cctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaa 256  Q
    |||||||||||||| |||||||| |||||||||| ||| |  |||||||||||||||||| |||||| ||||||||| | |||||||| |||||| ||||    
T  3463 cctttgaagcaacaggcaatgtctagaaaaacactttgctgctcttcctccaaagcatcatagcttactttaagtatctggtggatctttttattgggaa 3562  T
Q  257 tcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctgg-acctactaattctaaaaccaacggaaggccagaagcat 355  Q
    || ||||||| | ||||||||||   ||||||||||||||  ||||||||||| ||| ||| ||| |||| ||||||||| || |||||||| |||||||    
T  3563 tcttttcatatccatctaatgtacccttccattcttctatcgtctttccaaac-aagttggaacccactatttctaaaactaagggaaggcccgaagcat 3661  T
Q  356 aagctattgcacggtctaaaatgtcatcatagcttgaa 393  Q
    | |  | |||||| | ||||| ||| ||||| ||||||    
T  3662 atgaaactgcacgatttaaaacgtcttcataacttgaa 3699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 157 - 393
Target Start/End: Original strand, 12426 - 12662
Alignment:
Q  157 cctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaa 256  Q
    |||||||||||||| |||||||| |||||||||| ||| |  |||||||||||||||||| |||||| ||||||||| | |||||||| |||||| ||||    
T  12426 cctttgaagcaacaggcaatgtctagaaaaacactttgctgctcttcctccaaagcatcatagcttactttaagtatctcgtggatctttttattgggaa 12525  T
Q  257 tcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctgg-acctactaattctaaaaccaacggaaggccagaagcat 355  Q
    || ||||||| | ||||||||||   ||||||||||||||  ||||||||||| ||| ||| ||| |||| ||||||||| || |||||||| |||||||    
T  12526 tcttttcatatccatctaatgtacccttccattcttctatcgtctttccaaac-aagttggaacccactatttctaaaactaagggaaggcccgaagcat 12624  T
Q  356 aagctattgcacggtctaaaatgtcatcatagcttgaa 393  Q
    | |  | |||||| | ||||| ||| ||||| ||||||    
T  12625 atgaaactgcacgatttaaaacgtcttcataacttgaa 12662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 79; Significance: 2e-36; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 56 - 393
Target Start/End: Complemental strand, 9019 - 8682
Alignment:
Q  56 taatctttatgagagttttttcgaccaacactccaatatgatattctatgcattgaccatgataagcacaaagaatatcttcaacctctcccaaatcata 155  Q
    ||||||| | ||||| ||||||  |||||||||| | ||||| || |||||| || |||| || |||||  || |||||||||| |||   | |  || |    
T  9019 taatcttaacgagagatttttcagccaacactcctagatgatgttttatgcaatggccataatgagcacgtagtatatcttcaaactccttccatccaca 8920  T
Q  156 ccctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattagga 255  Q
     |||||||||||||| |||||||| |||||||||| ||| |  |||||||||||||||||| | |||| ||||||||| | |||||||| |||||| |||    
T  8919 tcctttgaagcaacaggcaatgtctagaaaaacactttgctgctcttcctccaaagcatcataacttactttaagtatctcgtggatctttttattggga 8820  T
Q  256 atcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctgg-acctactaattctaaaaccaacggaaggccagaagca 354  Q
    ||| ||||||| | ||||||||||   ||||||||||||||  ||||||||||| ||| ||| ||| |||| ||||||||| || |||||||| ||||||    
T  8819 atcttttcatatccatctaatgtacccttccattcttctatcgtctttccaaac-aagttggaacccactatttctaaaactaagggaaggcccgaagca 8721  T
Q  355 taagctattgcacggtctaaaatgtcatcatagcttgaa 393  Q
    || |  | |||||| | ||||| ||| ||||| ||||||    
T  8720 tatgaaactgcacgatttaaaacgtcttcataacttgaa 8682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 79; Significance: 2e-36; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 58 - 376
Target Start/End: Original strand, 56946 - 57264
Alignment:
Q  58 atctttatgagagttttttcgaccaacactccaatatgatattctatgcattgaccatgataagcacaaagaatatcttcaacctctcccaaatcatacc 157  Q
    ||||||||||||| ||||||   |||||||| ||| |||| ||  |||||   ||||| || ||||  ||| ||||||||||| |||   |||||| | |    
T  56946 atctttatgagagatttttcatgcaacactctaatttgatgtttcatgcagctaccataatgagcatgaagtatatcttcaacttcttttaaatcacatc 57045  T
Q  158 ctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaat 257  Q
    |||  ||| |||||| ||||||||||||||||   |  || ||||||||||||||||||||||||| ||||||||| |  ||||||| |||| | |||||    
T  57046 cttctaagaaacaagaaatgtcgagaaaaacattcttctcatcttcctccaaagcatcaaagcttactttaagtatctcttggatctttttaatgggaat 57145  T
Q  258 cctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctggacctactaattctaaaaccaacggaaggccagaagcataa 357  Q
    ||||||||||  || ||||| ||||||||||||| |||||||||||||||||||    | ||| |||| ||||||  |||| |||||||| |||||||||    
T  57146 cctttcatactgatttaatgcagatttccattctcctatattctttccaaacaagttcgaacccactacttctaaggccaatggaaggcctgaagcataa 57245  T
Q  358 gctattgcacggtctaaaa 376  Q
    | || |||| ||| |||||    
T  57246 gttactgcaaggtgtaaaa 57264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 479 - 568
Target Start/End: Original strand, 57374 - 57466
Alignment:
Q  479 atgacttgttagcaaatgttggtctcgagt---aatgatcactctgctaccaggaccaaaccagtcaagtccgcccgccataacttgcaattg 568  Q
    ||||| || |||||| |||| |||||||||   |||||||||| | ||||||||||||||||| |||||||| || |||| ||| || |||||    
T  57374 atgacctgctagcaattgttcgtctcgagtggtaatgatcactttactaccaggaccaaaccaatcaagtcctccagccaaaacctgtaattg 57466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 7e-36; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 151 - 368
Target Start/End: Original strand, 267085 - 267302
Alignment:
Q  151 tcataccctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttat 250  Q
    ||||| ||||||||||||||||||||||| | ||| ||||  || || ||||| |||||| ||||| |||| | ||||||||| || |||||||||||||    
T  267085 tcatatcctttgaagcaacaagcaatgtctaaaaagacactctgctcctcttcttccaaaccatcatagctcactttaagtatcttttggatctctttat 267184  T
Q  251 taggaatcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctggacctactaattctaaaaccaacggaaggccaga 350  Q
    | |||||| | ||||||| ||||||||||   ||||||||||||||  |||||||||||||    | ||| || | ||||||||| ||||||||||||||    
T  267185 tgggaatcttatcatacccatctaatgtacccttccattcttctatgctctttccaaacaagttagaacccacaatttctaaaactaacggaaggccaga 267284  T
Q  351 agcataagctattgcacg 368  Q
    ||||||||| | ||||||    
T  267285 agcataagcaactgcacg 267302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 64 - 393
Target Start/End: Original strand, 28126333 - 28126662
Alignment:
Q  64 atgagagttttttcgaccaacactccaatatgatattctatgcattgaccatgataagcacaaagaatatcttcaacctctcccaaatcataccctttga 163  Q
    ||||||| |||||| ||||||||||||| |||||  | |||||| || |||| || ||||  ||| || | ||||||||||  |||   |||||||||||    
T  28126333 atgagagatttttcaaccaacactccaacatgatgctttatgcaatggccataatgagcatgaagtatcttttcaacctctgtcaatctataccctttga 28126432  T
Q  164 agcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaatcctttc 263  Q
    |||| ||||| || |||||||| |||| ||| || |||||||||||||||||| |||||| ||||| ||| |  ||||||| |||||| |||||| ||||    
T  28126433 agcagcaagctatatcgagaaagacactttgctcatcttcctccaaagcatcatagcttagtttaaatatctcttggatctttttatttggaatcttttc 28126532  T
Q  264 atacctatctaatgtagatttccattcttctatattctttccaaacaaagctgg-acctactaattctaaaaccaacggaaggccagaagcataagctat 362  Q
    ||| | ||||||||||   ||||||||||||||  ||||||||||  ||| ||| ||| |||| ||||| ||| || |||||||| |||||||| |  |     
T  28126533 atatccatctaatgtacccttccattcttctatgctctttccaaa-taagttggaacccactatttctataactaagggaaggcctgaagcatatgaaac 28126631  T
Q  363 tgcacggtctaaaatgtcatcatagcttgaa 393  Q
    ||| |||| |||||  |||||||| ||||||    
T  28126632 tgcccggtttaaaacatcatcataacttgaa 28126662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 56 - 308
Target Start/End: Original strand, 28132151 - 28132403
Alignment:
Q  56 taatctttatgagagttttttcgaccaacactccaatatgatattctatgcattgaccatgataagcacaaagaatatcttcaacctctcccaaatcata 155  Q
    |||||| |||||||| |||||||||||||||||||| ||||| || |||||| || |||| || ||||  ||| || ||||| |||  |  |||   |||    
T  28132151 taatctctatgagagatttttcgaccaacactccaacatgatgttttatgcaatggccattatgagcatgaagtatctcttcgaccattgtcaatctata 28132250  T
Q  156 ccctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattagga 255  Q
    ||| |||||||||||||| || || ||||| |||| ||| || |||||||||||||||||  | |||| ||||| ||| |  ||||||| ||||||||||    
T  28132251 ccccttgaagcaacaagctatatccagaaagacactttgctcctcttcctccaaagcatcgtaacttactttaaatatctcatggatctttttattagga 28132350  T
Q  256 atcctttcatacctatctaatgtagatttccattcttctatattctttccaaa 308  Q
    ||| ||||||| | |||||||||| | ||||||||||||||  ||||||||||    
T  28132351 atcttttcatatccatctaatgtacacttccattcttctatgctctttccaaa 28132403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 155 - 356
Target Start/End: Complemental strand, 26137321 - 26137120
Alignment:
Q  155 accctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattagg 254  Q
    |||||||||||||||||||||| || | ||| |||| |||||  ||||| |||||||||||| |||||| | ||||||| || ||||| |||| ||  ||    
T  26137321 accctttgaagcaacaagcaatatccaaaaatacactttgttgttcttcgtccaaagcatcatagcttactctaagtatgttttggatatcttcatgtgg 26137222  T
Q  255 aatcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctgg-acctactaattctaaaaccaacggaaggccagaagc 353  Q
    ||||||||||||| | | ||||||||||| |||||||  | ||  |||||||||| ||||||| ||| |||| ||||||| | |||||||||||||||||    
T  26137221 aatcctttcatacttctgtaatgtagattcccattctgttgtacactttccaaac-aagctggaacccactacttctaaagctaacggaaggccagaagc 26137123  T
Q  354 ata 356  Q
    |||    
T  26137122 ata 26137120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 147 - 295
Target Start/End: Original strand, 5922210 - 5922358
Alignment:
Q  147 caaatcataccctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctct 246  Q
    ||||||||| |||||||||||||||||||| || |||||||||| ||  || ||||| ||||||||||||||||| | ||| || |   | || |||| |    
T  5922210 caaatcatatcctttgaagcaacaagcaatatcaagaaaaacacttttctcttcttcttccaaagcatcaaagctcacttttagcaacgtttgcatcttt 5922309  T
Q  247 ttattaggaatcctttcatacctatctaatgtagatttccattcttcta 295  Q
    |||| ||||||||||||||| | ||||||||||||||| |||| |||||    
T  5922310 ttatcaggaatcctttcataacgatctaatgtagatttacattgttcta 5922358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 6e-33; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 157 - 356
Target Start/End: Original strand, 29272589 - 29272788
Alignment:
Q  157 cctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaa 256  Q
    ||||||||||||||||||||||| ||||| |||| |||||  ||||| |||||||||||| | |||| ||||||||| | |||||||  |||||| ||||    
T  29272589 cctttgaagcaacaagcaatgtccagaaagacactttgttgctcttcttccaaagcatcataacttactttaagtatctggtggatccttttattgggaa 29272688  T
Q  257 tcctttcatacctatctaatgtagatttccattcttctatattctttccaaacaaagctgg-acctactaattctaaaaccaacggaaggccagaagcat 355  Q
    || ||||||| | ||||||||||   ||||||||||||||  ||||||||||| ||| ||| ||| |||| ||||||||| || |||||||| |||||||    
T  29272689 tcttttcatatccatctaatgtacccttccattcttctatcctctttccaaac-aagttggaacccactatttctaaaactaagggaaggcccgaagcat 29272787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 168 - 308
Target Start/End: Complemental strand, 31906474 - 31906334
Alignment:
Q  168 acaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaatcctttcatac 267  Q
    |||||| ||||| |||||||||| ||  || |||||||||||||||||||| |||| ||| |||||||| |||||||||||||| |||||  |||||||     
T  31906474 acaagccatgtcaagaaaaacacttttctcatcttcctccaaagcatcaaaacttactttgagtatattttggatctctttatttggaatgatttcatat 31906375  T
Q  268 ctatctaatgtagatttccattcttctatattctttccaaa 308  Q
    | || ||||| ||||| |||||||| |||||||||||||||    
T  31906374 cgatgtaatgcagattcccattcttgtatattctttccaaa 31906334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 167 - 268
Target Start/End: Complemental strand, 35984720 - 35984619
Alignment:
Q  167 aacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtatattgtggatctctttattaggaatcctttcata 266  Q
    ||||||||||||| |||||||||| ||| || |||||||| ||||||||||| |||| ||||||||| || ||||| ||||||||||||||  |||||||    
T  35984720 aacaagcaatgtcaagaaaaacactttgctcatcttcctctaaagcatcaaaacttactttaagtatcttttggatgtctttattaggaatggtttcata 35984621  T
Q  267 cc 268  Q
    ||    
T  35984620 cc 35984619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 31906592 - 31906548
Alignment:
Q  56 taatctttatgagagttttttcgaccaacactccaatatgatatt 100  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||||    
T  31906592 taatctttatgagagatttttcaaccaatactccaatatgatatt 31906548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 35984837 - 35984793
Alignment:
Q  56 taatctttatgagagttttttcgaccaacactccaatatgatatt 100  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||||    
T  35984837 taatctttatgagagatttttcaaccaatactccaatatgatatt 35984793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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