View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: F9295-LTR4-TNT-insertion-8 (Length: 747)
Name: F9295-LTR4-TNT-insertion-8
Description: F9295-LTR4
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] F9295-LTR4-TNT-insertion-8 |
 | |
|
| [»] chr4 (5 HSPs) |
| |
|
| [»] chr7 (4 HSPs) |
| |
|
| [»] scaffold0246 (1 HSPs) |
| | |
|
| [»] scaffold0002 (1 HSPs) |
| | |
|
| [»] scaffold0010 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 491; Significance: 0; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 491; E-Value: 0
Query Start/End: Original strand, 228 - 747
Target Start/End: Complemental strand, 512342 - 511823
Alignment:
| Q |
228 |
caattgttatttcaattcatttgataaccttattagtcaatgaaattgtaggattatatgatttgtccaaaaaagccatgataataacttttttctgtgt |
327 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
512342 |
caattgttatttcaattcatttgataaccttattagtcaatgaaattgtaggattatatgatttgtccaaaaaagccatgataataacttttttctgtgt |
512243 |
T |
|
| Q |
328 |
aacgggattgttaattactcgttggnnnnnnncgggccatttaccatttagtgatttatatgaatcactaatctttctttcatggggtttttccgttttt |
427 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
512242 |
aacgggattgttaattactcgttggtttttttcgggccatttaccatttagtgatttatatgaatcactaatctttctttcatggggtttttccattttt |
512143 |
T |
|
| Q |
428 |
catatggttccgtgttttaaaaaggagaaaaaccttttaagtacaataatcgcaccaagtgttatttttacccaaggctttgcgacttcgggtcttttaa |
527 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
512142 |
catatggttccgtgttttaaaaaggagaaaaaccttttaagtacaataatcgcaccaagtgttatttttacccaaggctttgcgacttcgggtcttttaa |
512043 |
T |
|
| Q |
528 |
ccaaaatgcatcaatctgtaatattagtacccgctctacaatcccattggctaatgatgcacgtaagtatgatgatattggcctatgcagctcttttatg |
627 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
512042 |
ccaaaatgcatcaatctgtaatattagtacccgctctacaatcccattggctaatgatgcacgtaagtatgatgatattggcctatgcagctcttttatg |
511943 |
T |
|
| Q |
628 |
tggatcattattatcagtagctattttagtcattacgtttcaagaagccatccaaattcttgcttttaccaagaatttggattttttaaataaatcagtt |
727 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
511942 |
tggatcattattatcagtagctattttagtcattacgtttcaagaagccatccaaattcttgcttttaccaagaatttggattttttaaataaatcagtt |
511843 |
T |
|
| Q |
728 |
gattttgtcgagataaaata |
747 |
Q |
| |
|
||||||||||| |||||||| |
|
|
| T |
511842 |
gattttgtcgaaataaaata |
511823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 491; E-Value: 0
Query Start/End: Original strand, 228 - 747
Target Start/End: Original strand, 18085595 - 18086114
Alignment:
| Q |
228 |
caattgttatttcaattcatttgataaccttattagtcaatgaaattgtaggattatatgatttgtccaaaaaagccatgataataacttttttctgtgt |
327 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18085595 |
caattgttatttcaattcatttgataaccttattagtcaatgaaattgtaggattatatgatttgtccaaaaaagccatgataataacttttttctgtgt |
18085694 |
T |
|
| Q |
328 |
aacgggattgttaattactcgttggnnnnnnncgggccatttaccatttagtgatttatatgaatcactaatctttctttcatggggtttttccgttttt |
427 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
18085695 |
aacgggattgttaattactcgttggtttttttcgggccatttaccatttagtgatttatatgaatcactaatctttctttcatggggtttttccattttt |
18085794 |
T |
|
| Q |
428 |
catatggttccgtgttttaaaaaggagaaaaaccttttaagtacaataatcgcaccaagtgttatttttacccaaggctttgcgacttcgggtcttttaa |
527 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18085795 |
catatggttccgtgttttaaaaaggagaaaaaccttttaagtacaataatcgcaccaagtgttatttttacccaaggctttgcgacttcgggtcttttaa |
18085894 |
T |
|
| Q |
528 |
ccaaaatgcatcaatctgtaatattagtacccgctctacaatcccattggctaatgatgcacgtaagtatgatgatattggcctatgcagctcttttatg |
627 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18085895 |
ccaaaatgcatcaatctgtaatattagtacccgctctacaatcccattggctaatgatgcacgtaagtatgatgatattggcctatgcagctcttttatg |
18085994 |
T |
|
| Q |
628 |
tggatcattattatcagtagctattttagtcattacgtttcaagaagccatccaaattcttgcttttaccaagaatttggattttttaaataaatcagtt |
727 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18085995 |
tggatcattattatcagtagctattttagtcattacgtttcaagaagccatccaaattcttgcttttaccaagaatttggattttttaaataaatcagtt |
18086094 |
T |
|
| Q |
728 |
gattttgtcgagataaaata |
747 |
Q |
| |
|
||||||||||| |||||||| |
|
|
| T |
18086095 |
gattttgtcgaaataaaata |
18086114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 228 - 480
Target Start/End: Complemental strand, 40479409 - 40479157
Alignment:
| Q |
228 |
caattgttatttcaattcatttgataaccttattagtcaatgaaattgtaggattatatgatttgtccaaaaaagccatgataataacttttttctgtgt |
327 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40479409 |
caattgttatttcaattcatttgataaccttattagtcaattaaattgtaggattatatgatttgtccaaaaaagccatgataataacttttttctgtgt |
40479310 |
T |
|
| Q |
328 |
aacgggattgttaattactcgttggnnnnnnncgggccatttaccatttagtgatttatatgaatcactaatctttctttcatggggtttttccgttttt |
427 |
Q |
| |
|
||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
40479309 |
aacgggattgttaattactcgttggtttttttctggccatttaccatttagtgatttatatgaatcactaatctttctttcatggggtttttccattttt |
40479210 |
T |
|
| Q |
428 |
catatggttccgtgttttaaaaaggagaaaaaccttttaagtacaataatcgc |
480 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40479209 |
catatggttccgtgttttaaaaaggagaaaaaccttttaagtacaataatcgc |
40479157 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 371 - 626
Target Start/End: Original strand, 45446334 - 45446584
Alignment:
| Q |
371 |
ccatttagtgatttatatgaatcactaatctttctttcatggggtttttccgtttttcatatggttccgtgttttaaaaaggagaaaaaccttttaagta |
470 |
Q |
| |
|
||||||| | |||||| ||||||||||||||| ||||||| ||||||||| |||||||||||||| |||||| |||| | ||||||||||| ||||| |
|
|
| T |
45446334 |
ccatttactaatttatttgaatcactaatcttactttcatcgggtttttcaatttttcatatggtt--gtgtttcaaaa-gcagaaaaaccttg-aagta |
45446429 |
T |
|
| Q |
471 |
caataatcgcaccaagtgttatttttacccaaggctttgcgactt-cgggtcttttaaccaaaatgcatcaatctgtaatattagtacccgc-tctacaa |
568 |
Q |
| |
|
||||| |||||| |||||||||||||||||| |||||| | || ||||||||||| |||||||||||||| || ||||||||||||| | ||||||| |
|
|
| T |
45446430 |
caata---gcaccacgtgttatttttacccaagactttgcaattttcgggtcttttagccaaaatgcatcaacttgcaatattagtacccccctctacaa |
45446526 |
T |
|
| Q |
569 |
tcccattggctaatgatgcacgtaagtatgatgatattggcctatgcagctcttttat |
626 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
45446527 |
tcccgttggctaatgatgcacgtaagtatgatgatattgggctatgcagctcttttat |
45446584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 625 - 747
Target Start/End: Original strand, 524695 - 524817
Alignment:
| Q |
625 |
atgtggatcattattatcagtagctattttagtcattacgtttcaagaagccatccaaattcttgcttttaccaagaatttggattttttaaataaatca |
724 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
524695 |
atgtggatcattattatcagtagctattttagtcattacgtttcaagaagccatccaaattcttacttttaccaagaatttggattttttaaataaatca |
524794 |
T |
|
| Q |
725 |
gttgattttgtcgagataaaata |
747 |
Q |
| |
|
|||||||||||||| |||||||| |
|
|
| T |
524795 |
gttgattttgtcgaaataaaata |
524817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 480; Significance: 0; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 480; E-Value: 0
Query Start/End: Original strand, 228 - 747
Target Start/End: Complemental strand, 6936281 - 6935761
Alignment:
| Q |
228 |
caattgttatttcaattcatttgataaccttattagtcaatgaaattgtaggattatatgatttgtccaaaaaagccatgataataacttttttctgtgt |
327 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6936281 |
caattgttatttcaattcatttgataaccttattagtcaatgaaattgtaggattatatgatttgtccaaaaaagccatgataataacttttttctgtgt |
6936182 |
T |
|
| Q |
328 |
aacgggattgttaattactcgttggnnnnnnncgggccatttaccatttagtgatttatatgaatcactaatctttctttcatggggtttttccgttttt |
427 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
6936181 |
aacgggattgttaattactcgttggtttttttcgggccatttaccatttagtgatttatatgaatcactaatctttctttcatggggtttttccattttt |
6936082 |
T |
|
| Q |
428 |
catatggttccgtgttttaaaaaggagaaaaaccttttaagtacaataatcgcaccaagtgttatttttacccaaggctttgcgacttcgggtcttttaa |
527 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6936081 |
catatggttccgtgttttaaaaaggagaaaaaccttttaagtacaataatcgcaccaagtgttatttttacccaaggctttgcgacttcgggtcttttaa |
6935982 |
T |
|
| Q |
528 |
ccaaaatgcatcaatctgtaatattagtacccgctctacaatcccattggctaatgatgcacgtaagtatgatgatattggcctatgcagctcttttatg |
627 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6935981 |
ccaaaatgcatcaatctgtaatattagtacccactctacaatcccattggctaatgatgcacgtaagtatgatgatattggcctatgcagctcttttatg |
6935882 |
T |
|
| Q |
628 |
tggatcattattatcagtagctattttagtcattacgtttcaagaagccatccaaattcttgcttttaccaagaatttggatt-ttttaaataaatcagt |
726 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
6935881 |
tggatcattattatcagtagctattttagtcattacgtttcaagaagccatccaaattcttgcttttaccaagaatttggatttttttaaataaatcagt |
6935782 |
T |
|
| Q |
727 |
tgattttgtcgagataaaata |
747 |
Q |
| |
|
|||||||||||| |||||||| |
|
|
| T |
6935781 |
tgattttgtcgaaataaaata |
6935761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 234 - 320
Target Start/End: Complemental strand, 46545046 - 46544960
Alignment:
| Q |
234 |
ttatttcaattcatttgataaccttattagtcaatgaaattgtaggattatatgatttgtccaaaaaagccatgataataacttttt |
320 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46545046 |
ttatttcaattcatttgataactttattagtcaatgaaaccgtaggattatatgatttgtccaaaaaagccatgataataacttttt |
46544960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 294 - 419
Target Start/End: Complemental strand, 6098212 - 6098087
Alignment:
| Q |
294 |
ccaaaaaagccatgataataacttttttctgtgtaacgggattgttaattactcgttggnnnnnnncgggccatttaccatttagtgatttatatgaatc |
393 |
Q |
| |
|
||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||| | |||||||||||||||||||||| ||||||||| |
|
|
| T |
6098212 |
ccaaaaaagtcatgataataactttttcgtgtgtaacgggattgttaattactcattgatttttttcaggccatttaccatttagtgattcatatgaatc |
6098113 |
T |
|
| Q |
394 |
actaatctttctttcatggggttttt |
419 |
Q |
| |
|
|||||||||||||||||| ||||||| |
|
|
| T |
6098112 |
actaatctttctttcatgaggttttt |
6098087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 486 - 557
Target Start/End: Complemental strand, 24981930 - 24981859
Alignment:
| Q |
486 |
gtgttatttttacccaaggctttgcgacttcgggtcttttaaccaaaatgcatcaatctgtaatattagtac |
557 |
Q |
| |
|
||||||||||||| ||| ||||| ||||||| |||||||| |||||||||| ||| |||||||||||||| |
|
|
| T |
24981930 |
gtgttatttttactcaatgctttatgacttcgagtcttttattcaaaatgcattaatatgtaatattagtac |
24981859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0246 (Bit Score: 290; Significance: 1e-162; HSPs: 1)
Name: scaffold0246
Description:
Target: scaffold0246; HSP #1
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 228 - 554
Target Start/End: Complemental strand, 17348 - 17022
Alignment:
| Q |
228 |
caattgttatttcaattcatttgataaccttattagtcaatgaaattgtaggattatatgatttgtccaaaaaagccatgataataacttttttctgtgt |
327 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17348 |
caattgttatttcaattcatttgataaccttattagtcaattaaattgtaggattatatgatttgtccaaaaaagccatgataataacttttttctgtgt |
17249 |
T |
|
| Q |
328 |
aacgggattgttaattactcgttggnnnnnnncgggccatttaccatttagtgatttatatgaatcactaatctttctttcatggggtttttccgttttt |
427 |
Q |
| |
|
||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
17248 |
aacgggattgttaattactcgttggtttttttctggccatttaccatttagtgatttatatgaatcactaatctttctttcatggggtttttccattttt |
17149 |
T |
|
| Q |
428 |
catatggttccgtgttttaaaaaggagaaaaaccttttaagtacaataatcgcaccaagtgttatttttacccaaggctttgcgacttcgggtcttttaa |
527 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17148 |
catatggttccgtgttttaaaaaggagataaaccttttaagtacaataatcgcaccaagtgttatttttacccaaggctttgcgacttcgggtcttttaa |
17049 |
T |
|
| Q |
528 |
ccaaaatgcatcaatctgtaatattag |
554 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
17048 |
ccaaaatgcatcaatctgtaatattag |
17022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 227; Significance: 1e-125; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 7 - 233
Target Start/End: Original strand, 30986332 - 30986558
Alignment:
| Q |
7 |
aattaagacatttagttgttttcaactaagaggtatcactttccttcctgactcacaatttctccatctcttttgacgatatagaactgtgattattctc |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30986332 |
aattaagacatttagttgttttcaactaagaggtatcactttccttcctgactcacaatttctccatctcttttgacgatatagaactgtgattattctc |
30986431 |
T |
|
| Q |
107 |
attctatttggaaaaagggttgatagaggttatgaactgctatcttggtaagtagaaatattatcttgatgacttaaaaagaaaagtcttctagatgggt |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30986432 |
attctatttggaaaaagggttgatagaggttatgaactgctatcttggtaagtagaaatattatcttgatgacttaaaaagaaaagtcttctagatgggt |
30986531 |
T |
|
| Q |
207 |
taagaaaggttttggaaattacaattg |
233 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
30986532 |
taagaaaggttttggaaattacaattg |
30986558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 522 - 661
Target Start/End: Complemental strand, 40923614 - 40923475
Alignment:
| Q |
522 |
ttttaaccaaaatgcatcaatctgtaatattagtacccgctctacaatcccattggctaatgatgcacgtaagtatgatgatattggcctatgcagctct |
621 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
40923614 |
ttttaaccaaaatgcatcaatctgtaatattagtacccgctctacaatcccattggctaatgatgcacgtaagtatgatgatattgggctatgcagctct |
40923515 |
T |
|
| Q |
622 |
tttatgtggatcattattatcagtagctattttagtcatt |
661 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40923514 |
tttatgtggatcattattatcagtagctattttagtcatt |
40923475 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 490 - 642
Target Start/End: Complemental strand, 174274 - 174122
Alignment:
| Q |
490 |
tatttttacccaaggctttgcgacttcgggtcttttaaccaaaatgcatcaatctgtaatattagtacccgctctacaatcccattggctaatgatgcac |
589 |
Q |
| |
|
|||||| || ||||||||||| || |||||||||||||| ||||||||||||| ||| ||||||| ||||||||||| || ||| |||||||||| |
|
|
| T |
174274 |
tattttaacgcaaggctttgccacgtcgggtcttttaactgaaatgcatcaatccacgatactagtacctgctctacaatctcagtggttaatgatgcat |
174175 |
T |
|
| Q |
590 |
gtaagtatgatgatattggcctatgcagctcttttatgtggatcattattatc |
642 |
Q |
| |
|
|| ||||||||| |||| |||||| ||||||| || ||||| |||||||| |
|
|
| T |
174174 |
gtcagtatgatgttattaagttatgcaactcttttgtgcggatccttattatc |
174122 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0010 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0010
Description:
Target: scaffold0010; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 228 - 292
Target Start/End: Complemental strand, 225136 - 225072
Alignment:
| Q |
228 |
caattgttatttcaattcatttgataaccttattagtcaatgaaattgtaggattatatgatttg |
292 |
Q |
| |
|
||||||| ||||||||||||||||||| ||||||| ||||| |||| ||| |||| ||| ||||| |
|
|
| T |
225136 |
caattgtcatttcaattcatttgataatcttattactcaataaaatcgtatgattttataatttg |
225072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 237 - 301
Target Start/End: Complemental strand, 46060793 - 46060729
Alignment:
| Q |
237 |
tttcaattcatttgataaccttattagtcaatgaaattgtaggattatatgatttgtccaaaaaa |
301 |
Q |
| |
|
||||||||||||||||||||||||| ||||| |||| | | ||||||| |||||||||||||| |
|
|
| T |
46060793 |
tttcaattcatttgataaccttatttgtcaaagaaacggcaacattatatcatttgtccaaaaaa |
46060729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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