View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: F9302-LTR4-TNT-insertion-1 (Length: 386)
Name: F9302-LTR4-TNT-insertion-1
Description: F9302-LTR4
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] F9302-LTR4-TNT-insertion-1 |
 | |
|
| [»] scaffold0302 (1 HSPs) |
| | |
|
| [»] scaffold0266 (1 HSPs) |
| | |
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| [»] scaffold0008 (3 HSPs) |
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| [»] scaffold0011 (2 HSPs) |
| | |
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| [»] scaffold1140 (1 HSPs) |
| | |
|
| [»] scaffold0615 (1 HSPs) |
| | |
|
| [»] scaffold0225 (1 HSPs) |
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| [»] scaffold0022 (1 HSPs) |
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| [»] scaffold0467 (2 HSPs) |
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| [»] scaffold0673 (1 HSPs) |
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| [»] scaffold0465 (1 HSPs) |
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| [»] scaffold0120 (1 HSPs) |
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| [»] scaffold0462 (1 HSPs) |
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| [»] scaffold0610 (1 HSPs) |
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| [»] scaffold0162 (1 HSPs) |
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| [»] scaffold0021 (2 HSPs) |
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| [»] scaffold0009 (1 HSPs) |
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| [»] scaffold0218 (1 HSPs) |
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| [»] scaffold0138 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 342; Significance: 0; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 342; E-Value: 0
Query Start/End: Original strand, 35 - 376
Target Start/End: Original strand, 15943014 - 15943355
Alignment:
| Q |
35 |
aattgcgcaagctttagcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggagg |
134 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15943014 |
aattgcgcaagctttagcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggagg |
15943113 |
T |
|
| Q |
135 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgag |
234 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15943114 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgag |
15943213 |
T |
|
| Q |
235 |
ctatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggcttgagtt |
334 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15943214 |
ctatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggcttgagtt |
15943313 |
T |
|
| Q |
335 |
ggaaggtgatgtggtgacctgggctaagttcaaggttgaatt |
376 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15943314 |
ggaaggtgatgtggtgacctgggctaagttcaaggttgaatt |
15943355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 35 - 376
Target Start/End: Original strand, 6149272 - 6149613
Alignment:
| Q |
35 |
aattgcgcaagctttagcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggagg |
134 |
Q |
| |
|
|||||||||||| |||||||||||| | ||||| |||||||||||||||||||||||| ||||||| ||||||||||| |||||||| |||||||||||| |
|
|
| T |
6149272 |
aattgcgcaagccttagcgactatgcctcaagtgttggcccagtcgaatgagaatgcgatggctaatcgtaggaatgagggtgaggctgaagagaggagg |
6149371 |
T |
|
| Q |
135 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgag |
234 |
Q |
| |
|
|| ||||||||||||||||||||||||| || ||||||||||||||| |||||| |||| ||||| ||||||||||| || ||||||| ||||||||||| |
|
|
| T |
6149372 |
cttgataggttcttgaggaacaatccactgaatttcaaagggaggtttgatccatagggagcacaaacttgggtgcagggtatggagcggattttccgag |
6149471 |
T |
|
| Q |
235 |
ctatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggcttgagtt |
334 |
Q |
| |
|
||||||| ||||||| |||||| ||||| || || |||||||||||| | |||||||||| |||||||||||||| |||||||| ||||| |||||| | |
|
|
| T |
6149472 |
ctatggtgacaggaggtgaccagaaggtcaggctagcgactcatatgcttgctgaggaagcagagcactggtggactaatgccaaaggaagacttgagat |
6149571 |
T |
|
| Q |
335 |
ggaaggtgatgtggtgacctgggctaagttcaaggttgaatt |
376 |
Q |
| |
|
|| ||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
6149572 |
gggaggtgatgtggtgacctgggcgaagtttaaggttgaatt |
6149613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 36 - 252
Target Start/End: Complemental strand, 5225169 - 5224953
Alignment:
| Q |
36 |
attgcgcaagctttagcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggaggc |
135 |
Q |
| |
|
|||||| |||||||||| ||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5225169 |
attgcggaagctttagcagctatggcacaagttttggctcaagcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggaggc |
5225070 |
T |
|
| Q |
136 |
tcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgagc |
235 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| ||||| ||||| |||||||| ||| ||||||||||||| |||||||||| |||||||| ||| |
|
|
| T |
5225069 |
tcgataggttcttgaggaacaatccaccaactttcaaggggagattcgacccagagggagcatagacttgggtgcaggggatggagcggattttccaagc |
5224970 |
T |
|
| Q |
236 |
tatggttacaggagatg |
252 |
Q |
| |
|
||||||||| ||||||| |
|
|
| T |
5224969 |
tatggttacgggagatg |
5224953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 48 - 367
Target Start/End: Complemental strand, 25768923 - 25768604
Alignment:
| Q |
48 |
ttagcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggaggctcgataggttct |
147 |
Q |
| |
|
|||||| | ||||| || || ||||| |||||||||||||||| |||||||| ||| |||| ||||| || || || ||| ||||||||||| |||||| |
|
|
| T |
25768923 |
ttagcggcgatggctcaggtgttggctcagtcgaatgagaatgtggtggctagtcgtcggaacgaaggggaagctgaggagcggaggctcgatcggttct |
25768824 |
T |
|
| Q |
148 |
tgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgagctatggttacagg |
247 |
Q |
| |
|
|| |||||||||| |||| ||||| || |||||| |||| ||||| || || ||||||||||| || || ||| ||| ||||| |||||||| || | |
|
|
| T |
25768823 |
tggggaacaatccgtcgacgttcaagggaaggttcaatccggagggagctcatacttgggtgcagggcatagagaggatattccgtgctatggtgacgag |
25768724 |
T |
|
| Q |
248 |
agatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggcttgagttggaaggtgatgtg |
347 |
Q |
| |
|
|||||||||||||| ||| |||||||||||||| | ||||||| || || || |||||||| |||||||| ||||| |||||||||| ||| || || |
|
|
| T |
25768723 |
tgatgaccaaaaggtcagattggcgactcatatgcttgctgaggaggccgaacattggtggactaatgccaaaggaagacttgagttgggaggagaagtt |
25768624 |
T |
|
| Q |
348 |
gtgacctgggctaagttcaa |
367 |
Q |
| |
|
||||||||||| |||||||| |
|
|
| T |
25768623 |
gtgacctgggcgaagttcaa |
25768604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 74 - 369
Target Start/End: Original strand, 22149204 - 22149499
Alignment:
| Q |
74 |
ccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggaggctcgataggttcttgaggaacaatccaccgactttcaaa |
173 |
Q |
| |
|
|||||||| ||||||||| ||||||||| | |||| ||||| ||||| || ||| ||| ||||||| ||||||||||||||||||| || || || ||| |
|
|
| T |
22149204 |
ccagtcgagtgagaatgcaatggctaaccatcggaacgaaggagaggcggaggagcggatgctcgatcggttcttgaggaacaatccgcctacgttaaaa |
22149303 |
T |
|
| Q |
174 |
gggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgagctatggttacaggagatgaccaaaaggttagactggcga |
273 |
Q |
| |
|
||||||||||| || || || || |||| ||||||| | || || ||| ||| || | || |||| || || |||||||| |||||||| |||| | |
|
|
| T |
22149304 |
gggaggttcgacccggaaggagctcagatttgggtgtagggcatagagaggatctttcatgcggtggtgactggcgatgaccagaaggttaggttggcta |
22149403 |
T |
|
| Q |
274 |
ctcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggcttgagttggaaggtgatgtggtgacctgggctaagttcaagg |
369 |
Q |
| |
|
|||||||| | ||||||| || ||| | | |||||| |||||||| ||||| |||||| |||| || || |||||||| ||||| | |||||||| |
|
|
| T |
22149404 |
ctcatatgcttgctgaggaggcagagtattagtggactaatgccaaaggaagacttgagatggagggggaggtggtgacttgggcaaggttcaagg |
22149499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 153 - 332
Target Start/End: Original strand, 8270936 - 8271115
Alignment:
| Q |
153 |
aacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgagctatggttacaggagatg |
252 |
Q |
| |
|
||||||||||| || ||||| || |||||||| || || || || ||||| ||| ||||||| |||||| ||| || || |||||||| || | |||| |
|
|
| T |
8270936 |
aacaatccacctacgttcaagggaaggttcgacccggatggagctcagacatggttgcaaggcatggagaggatctttcgtgctatggtgactagtgatg |
8271035 |
T |
|
| Q |
253 |
accaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggcttgag |
332 |
Q |
| |
|
| |||||||| || |||| |||| ||| | ||||||| || ||| | |||||||||||||| |||||||| |||||| |
|
|
| T |
8271036 |
atcaaaaggtgaggttggctactcgcatgcttgctgaggaggctgagtattggtggaccaatgctaagggaagacttgag |
8271115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 332
Target Start/End: Complemental strand, 30150983 - 30150781
Alignment:
| Q |
130 |
ggaggctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagatttt |
229 |
Q |
| |
|
||||||| ||| | |||||| | ||||||||||| || ||||| || |||||||| || || || || || || ||| ||||||| |||||| ||| || |
|
|
| T |
30150983 |
ggaggcttgatcgtttcttgcgaaacaatccacctacgttcaagggaaggttcgacccggatggagctcaaacatggttgcaaggcatggagaggatctt |
30150884 |
T |
|
| Q |
230 |
ccgagctatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggctt |
329 |
Q |
| |
|
|| |||||||| || | ||||| || ||||| || |||| ||||| ||| | ||||||| || ||| | |||||||||||||| |||||||| ||| |
|
|
| T |
30150883 |
tcgtgctatggtgactagtgatgatcagaaggtgaggttggctactcacatgcttgctgaggaggctgagtattggtggaccaatgctaagggaagactt |
30150784 |
T |
|
| Q |
330 |
gag |
332 |
Q |
| |
|
||| |
|
|
| T |
30150783 |
gag |
30150781 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0302 (Bit Score: 306; Significance: 1e-172; HSPs: 1)
Name: scaffold0302
Description:
Target: scaffold0302; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 35 - 376
Target Start/End: Complemental strand, 3531 - 3190
Alignment:
| Q |
35 |
aattgcgcaagctttagcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggagg |
134 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3531 |
aattgcgcaagccttagcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggagg |
3432 |
T |
|
| Q |
135 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgag |
234 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||| |
|
|
| T |
3431 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggagcacagacttgggtgcaggggatggagcggattttccgag |
3332 |
T |
|
| Q |
235 |
ctatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggcttgagtt |
334 |
Q |
| |
|
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
3331 |
ctatggttacgggagatgaccagaaggttagactggcgactcatatgttgactgaggaagcagagcattggtggaccaatgccaagggaaggcttgagtt |
3232 |
T |
|
| Q |
335 |
ggaaggtgatgtggtgacctgggctaagttcaaggttgaatt |
376 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3231 |
gggaggtgatgtggtgacctgggctaagttcaaggttgaatt |
3190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 282; Significance: 1e-158; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 35 - 376
Target Start/End: Complemental strand, 23509681 - 23509340
Alignment:
| Q |
35 |
aattgcgcaagctttagcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggagg |
134 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23509681 |
aattgcgcaagctttagcgactatggcgcgtgttttggcctagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggagg |
23509582 |
T |
|
| Q |
135 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgag |
234 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||| ||||||||||| |
|
|
| T |
23509581 |
ctcgataggtttttgaggaacaatccaccgactttcaaagggaggttcaatccagagggagcacagacttgggtgcaggggatggagcggattttccgag |
23509482 |
T |
|
| Q |
235 |
ctatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggcttgagtt |
334 |
Q |
| |
|
|||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||| |
|
|
| T |
23509481 |
ctatggttacgggagatgaccagaaggtcagactggcgactcatatgttgactgaggaagcagagcactggtggaccaatgccaaaggaaggcttaagtt |
23509382 |
T |
|
| Q |
335 |
ggaaggtgatgtggtgacctgggctaagttcaaggttgaatt |
376 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23509381 |
gggaggtgatgtggtgacctgggctaagttcaaggttgaatt |
23509340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 153 - 332
Target Start/End: Complemental strand, 24585088 - 24584909
Alignment:
| Q |
153 |
aacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgagctatggttacaggagatg |
252 |
Q |
| |
|
||||||||||| || ||||| || |||||||| || || || || ||||| ||| ||||||| |||||| ||| || || |||||||| || | |||| |
|
|
| T |
24585088 |
aacaatccacctacgttcaagggaaggttcgacccggatggagctcagacatggttgcaaggcatggagaggatctttcgtgctatggtgactagtgatg |
24584989 |
T |
|
| Q |
253 |
accaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggcttgag |
332 |
Q |
| |
|
| || ||||| || |||| ||||| ||| | ||||||| || ||| | |||||||||||||| |||||||| |||||| |
|
|
| T |
24584988 |
atcagaaggtgaggttggctactcagatgcttgctgaggaggctgagtattggtggaccaatgctaagggaagacttgag |
24584909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0266 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: scaffold0266
Description:
Target: scaffold0266; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 36 - 376
Target Start/End: Original strand, 6041 - 6381
Alignment:
| Q |
36 |
attgcgcaagctttagcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggaggc |
135 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6041 |
attgcgcaagctttagcaactatggcgcaagttttggcccagtcgaatgagaatgcgatggctaaccgtaggaatgaaggtgaggccgaagagaggaggc |
6140 |
T |
|
| Q |
136 |
tcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgagc |
235 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||| |||||||||||| |
|
|
| T |
6141 |
tcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatctagagggggcacagacttgggtgcagggaatggagcggattttccgagc |
6240 |
T |
|
| Q |
236 |
tatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggcttgagttg |
335 |
Q |
| |
|
||||||||| ||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
6241 |
tatggttacgggagatgaccagaaggtcagactagcgactcatatgttgactgaggaagcagagcactagtggaccaatgccaagggaaggcttgagttg |
6340 |
T |
|
| Q |
336 |
gaaggtgatgtggtgacctgggctaagttcaaggttgaatt |
376 |
Q |
| |
|
| | |||||||||||||||||||||||||||||||||||| |
|
|
| T |
6341 |
ggaaatgatgtggtgacctgggctaagttcaaggttgaatt |
6381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0008 (Bit Score: 274; Significance: 1e-153; HSPs: 3)
Name: scaffold0008
Description:
Target: scaffold0008; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 35 - 376
Target Start/End: Original strand, 130669 - 131010
Alignment:
| Q |
35 |
aattgcgcaagctttagcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggagg |
134 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
130669 |
aattgcgcaagctttagcgactatggcgcaagttttggcccagtcgaatgagaatacggtgggtaaccgtaggaatgaaggtgaggccgaagagaggagg |
130768 |
T |
|
| Q |
135 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgag |
234 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| || ||||||| ||||||| ||| |
|
|
| T |
130769 |
ctcgataggttcttgaggaacaatccactgactttcaaagggaggttcgatttagagggggcacagacttgggtgcagggaatggagcggattttctgag |
130868 |
T |
|
| Q |
235 |
ctatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggcttgagtt |
334 |
Q |
| |
|
|||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| || |
|
|
| T |
130869 |
ctattgttacggaagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcagagcactagtggaccaatgccaagggaaggcttgaatt |
130968 |
T |
|
| Q |
335 |
ggaaggtgatgtggtgacctgggctaagttcaaggttgaatt |
376 |
Q |
| |
|
|| || |||||||||||||||||||||||||||||||||||| |
|
|
| T |
130969 |
gggagatgatgtggtgacctgggctaagttcaaggttgaatt |
131010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0008; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 175 - 367
Target Start/End: Complemental strand, 27757 - 27565
Alignment:
| Q |
175 |
ggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgagctatggttacaggagatgaccaaaaggttagactggcgac |
274 |
Q |
| |
|
||||||||||||||||||| ||||| ||||||||||| |||||||||| |||||||||||||| ||| || |||||||||| ||||| ||||| ||||| |
|
|
| T |
27757 |
ggaggttcgatccagagggagcacaaacttgggtgcaggggatggagcggattttccgagctacggtcacgagagatgaccagaaggtcagactagcgac |
27658 |
T |
|
| Q |
275 |
tcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggcttgagttggaaggtgatgtggtgacctgggctaagttcaa |
367 |
Q |
| |
|
| ||||| | |||||||||| ||||||||||||| |||||||| ||||| |||||| ||| ||||||||||| |||||||||||||||||| |
|
|
| T |
27657 |
ttatatgcttgctgaggaagcaaagcactggtggactaatgccaaaggaagacttgagatgggaggtgatgtggggacctgggctaagttcaa |
27565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0008; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 35 - 140
Target Start/End: Complemental strand, 27852 - 27747
Alignment:
| Q |
35 |
aattgcgcaagctttagcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggagg |
134 |
Q |
| |
|
|||||| | |||||||| ||| ||||| ||||| ||||| ||||||||||||||| | |||||||| ||||| || |||||||||||||| ||| ||||| |
|
|
| T |
27852 |
aattgcactagctttagtgacgatggcacaagtgttggctcagtcgaatgagaatacagtggctaatcgtagtaacgaaggtgaggccgaggagcggagg |
27753 |
T |
|
| Q |
135 |
ctcgat |
140 |
Q |
| |
|
||||| |
|
|
| T |
27752 |
ttcgat |
27747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0011 (Bit Score: 262; Significance: 1e-146; HSPs: 2)
Name: scaffold0011
Description:
Target: scaffold0011; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 35 - 376
Target Start/End: Original strand, 72908 - 73249
Alignment:
| Q |
35 |
aattgcgcaagctttagcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggagg |
134 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
72908 |
aattgcgcaagctttagcgactatggcgcaagttttggcccagtcgtatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggagg |
73007 |
T |
|
| Q |
135 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgag |
234 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||| |
|
|
| T |
73008 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggagcacagacttgggtgcagggtatagcgcggattttccgag |
73107 |
T |
|
| Q |
235 |
ctatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggcttgagtt |
334 |
Q |
| |
|
|||||||||| ||||||||||| ||||| ||||| |||||||||||| | | |||||||| |||||||||||||| || ||||| |||||||||||||| |
|
|
| T |
73108 |
ctatggttacgggagatgaccagaaggtcagactagcgactcatatgctagccgaggaagcagagcactggtggactaacgccaaaggaaggcttgagtt |
73207 |
T |
|
| Q |
335 |
ggaaggtgatgtggtgacctgggctaagttcaaggttgaatt |
376 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
73208 |
gggaggtgatgtggtgacctgggctaagttcaaggttgaatt |
73249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0011; HSP #2
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 35 - 376
Target Start/End: Original strand, 77289 - 77630
Alignment:
| Q |
35 |
aattgcgcaagctttagcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggagg |
134 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
77289 |
aattgcgcaagctttagcgactatggcgcaagttttggcccagtcgtatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggagg |
77388 |
T |
|
| Q |
135 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgag |
234 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||| |
|
|
| T |
77389 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggagcacagacttgggtgcagggtatagcgcggattttccgag |
77488 |
T |
|
| Q |
235 |
ctatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggcttgagtt |
334 |
Q |
| |
|
|||||||||| ||||||||||| ||||| ||||| |||||||||||| | | |||||||| |||||||||||||| || ||||| |||||||||||||| |
|
|
| T |
77489 |
ctatggttacgggagatgaccagaaggtcagactagcgactcatatgctagccgaggaagcagagcactggtggactaacgccaaaggaaggcttgagtt |
77588 |
T |
|
| Q |
335 |
ggaaggtgatgtggtgacctgggctaagttcaaggttgaatt |
376 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
77589 |
gggaggtgatgtggtgacctgggctaagttcaaggttgaatt |
77630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 262; Significance: 1e-146; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 35 - 376
Target Start/End: Complemental strand, 20529160 - 20528819
Alignment:
| Q |
35 |
aattgcgcaagctttagcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggagg |
134 |
Q |
| |
|
|||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20529160 |
aattgcacaagctttagcgactatggcacaagttttggcccagtcgaatgagaatgcagtggctaaccgtaggaatgaaggtgaggccgaagagaggagg |
20529061 |
T |
|
| Q |
135 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgag |
234 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||| |||||||| || |
|
|
| T |
20529060 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatctagagggatcacagacttgggtgcagaggatggagcggattttccaag |
20528961 |
T |
|
| Q |
235 |
ctatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggcttgagtt |
334 |
Q |
| |
|
|||||||||| | ||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||| | |
|
|
| T |
20528960 |
ctatggttacggaagatgaccagaaggttagactagcgactcatatgttgactgaggaagcagagcactggtggactaatgccaaaggaaggcttgagat |
20528861 |
T |
|
| Q |
335 |
ggaaggtgatgtggtgacctgggctaagttcaaggttgaatt |
376 |
Q |
| |
|
|| || |||||||||||||||||||||||||||||||||||| |
|
|
| T |
20528860 |
gggagatgatgtggtgacctgggctaagttcaaggttgaatt |
20528819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 35 - 376
Target Start/End: Complemental strand, 20929160 - 20928820
Alignment:
| Q |
35 |
aattgcgcaagctttagcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggagg |
134 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
20929160 |
aattgcgcaaactttagcgactatggcgcaagttttggctcagtcgaatgagaatgcggtgactaaccgtaggaatgaaggtgagaccgaagagaggagg |
20929061 |
T |
|
| Q |
135 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgag |
234 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||| | || ||||| | ||||||||||| |
|
|
| T |
20929060 |
ctcgataggttcttgaggaacaatccagtgactttcaaagg-aggttcgatctagagggggcacagacttgggtgtagggaatggaacggattttccgag |
20928962 |
T |
|
| Q |
235 |
ctatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggcttgagtt |
334 |
Q |
| |
|
|||||||||| ||||||||||| ||||| |||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||| | |
|
|
| T |
20928961 |
ctatggttacgggagatgaccagaaggtcagactggcgactcataagttgactgaggaagcagagcattggtggaccaatgccaagggaaggcttgagat |
20928862 |
T |
|
| Q |
335 |
ggaaggtgatgtggtgacctgggctaagttcaaggttgaatt |
376 |
Q |
| |
|
|| || |||||||||||||||||||||||||||||||||||| |
|
|
| T |
20928861 |
gggagatgatgtggtgacctgggctaagttcaaggttgaatt |
20928820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 69 - 211
Target Start/End: Original strand, 20959622 - 20959764
Alignment:
| Q |
69 |
ttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggaggctcgataggttcttgaggaacaatccaccgactt |
168 |
Q |
| |
|
||||| |||| |||||||||||||||||||| ||| |||| || || || || || ||| |||| |||||| ||||| || |||||||||| ||||| | |
|
|
| T |
20959622 |
ttggctcagtggaatgagaatgcggtggctagtcgtcggaacgagggagaagctgaggagcggagactcgatcggttcctgcggaacaatccgccgacgt |
20959721 |
T |
|
| Q |
169 |
tcaaagggaggttcgatccagagggggcacagacttgggtgca |
211 |
Q |
| |
|
|||| ||||||||||| || || || || |||||||||||||| |
|
|
| T |
20959722 |
tcaaggggaggttcgacccggaaggagctcagacttgggtgca |
20959764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 69 - 321
Target Start/End: Original strand, 22128724 - 22128976
Alignment:
| Q |
69 |
ttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggaggctcgataggttcttgaggaacaatccaccgactt |
168 |
Q |
| |
|
||||| |||||||||||| |||||| | | ||| |||||||||| || || || ||| ||||||| ||| | |||||| | ||||||||||| || | |
|
|
| T |
22128724 |
ttggctcagtcgaatgagcatgcggcgattggtcgtcggaatgaaggggaagctgaggagcggaggcttgatcgtttcttgcgaaacaatccacctacgt |
22128823 |
T |
|
| Q |
169 |
tcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgagctatggttacaggagatgaccaaaaggttagact |
268 |
Q |
| |
|
|||| |||||||| || || ||||| || ||||| ||||||||||| |||||| ||| || ||| ||||||| || | ||||| |||||||| || | |
|
|
| T |
22128824 |
tcaaggggaggtttgacccggagggagctcagacgtgggtgcaaggcatggagaggatctttcgaactatggtgactagtgatgatcaaaaggtcaggtt |
22128923 |
T |
|
| Q |
269 |
ggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagg |
321 |
Q |
| |
|
||| ||||||||| | ||||||| || ||| | |||||||| ||||| |||| |
|
|
| T |
22128924 |
ggctactcatatgattgctgaggaggccgagtattggtggactaatgctaagg |
22128976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 332
Target Start/End: Original strand, 20827739 - 20827941
Alignment:
| Q |
130 |
ggaggctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagatttt |
229 |
Q |
| |
|
||||||| ||| | |||||| | ||||||||||| || ||||| || |||||||| || || || || || || ||| ||||||| |||||| ||| || |
|
|
| T |
20827739 |
ggaggcttgatcgtttcttgcgaaacaatccacctacgttcaagggaaggttcgacccggatggagctcaaacatggttgcaaggcatggagaggatctt |
20827838 |
T |
|
| Q |
230 |
ccgagctatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggctt |
329 |
Q |
| |
|
|| |||||||| || | ||||| || ||||| || |||| ||||| ||| | ||||||| || ||| | |||||||||||||| |||||||| ||| |
|
|
| T |
20827839 |
tcgtgctatggtgactagtgatgatcagaaggtgaggttggctactcacatgcttgctgaggaggctgagtattggtggaccaatgctaagggaagactt |
20827938 |
T |
|
| Q |
330 |
gag |
332 |
Q |
| |
|
||| |
|
|
| T |
20827939 |
gag |
20827941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1140 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: scaffold1140
Description:
Target: scaffold1140; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 35 - 376
Target Start/End: Complemental strand, 712 - 371
Alignment:
| Q |
35 |
aattgcgcaagctttagcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggagg |
134 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
712 |
aattgcgcaagctttagcgactatggcataagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaataaaggtgaggccaaagagaggagg |
613 |
T |
|
| Q |
135 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgag |
234 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| || ||||||| ||||||||||| |
|
|
| T |
612 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggagcacatacttgggtgcagggtatggagcggattttccgag |
513 |
T |
|
| Q |
235 |
ctatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggcttgagtt |
334 |
Q |
| |
|
|||||||||| ||||||||||| ||||| ||||| |||||||||||| | |||||||||| |||||||| ||||| |||||||| |||||||||||||| |
|
|
| T |
512 |
ctatggttacgggagatgaccagaaggtcagactagcgactcatatgctagctgaggaagcagagcactgatggactaatgccaaaggaaggcttgagtt |
413 |
T |
|
| Q |
335 |
ggaaggtgatgtggtgacctgggctaagttcaaggttgaatt |
376 |
Q |
| |
|
|| |||| |||||||||| ||||||||||||||||||||||| |
|
|
| T |
412 |
gggaggttatgtggtgacgtgggctaagttcaaggttgaatt |
371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 246; Significance: 1e-136; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 35 - 376
Target Start/End: Original strand, 1660168 - 1660509
Alignment:
| Q |
35 |
aattgcgcaagctttagcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggagg |
134 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| || |||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1660168 |
aattgcgcaagctttagcgactatggcgcaggttttggctcaagggaatgagaatacggcggctaaccgtaggaatgaaggtgaggccgaagagaggagg |
1660267 |
T |
|
| Q |
135 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgag |
234 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||| ||||||||||| |
|
|
| T |
1660268 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggagcacagacttgggtgcagggaatggagcggattttccgag |
1660367 |
T |
|
| Q |
235 |
ctatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggcttgagtt |
334 |
Q |
| |
|
|||||||||| ||||||||||| ||||| ||||| |||||||||||||| |||||||||| ||| ||||||||| |||||||||||| ||||||||||| |
|
|
| T |
1660368 |
ctatggttacgggagatgaccagaaggtcagactagcgactcatatgtttgctgaggaagcagagtactggtggatcaatgccaagggcaggcttgagtt |
1660467 |
T |
|
| Q |
335 |
ggaaggtgatgtggtgacctgggctaagttcaaggttgaatt |
376 |
Q |
| |
|
|| |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
1660468 |
gggcggtgatgtggtgacctgggccaagttcaaggttgaatt |
1660509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 35 - 376
Target Start/End: Complemental strand, 17787153 - 17786811
Alignment:
| Q |
35 |
aattgcgcaagctttagcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggagg |
134 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
17787153 |
aattgcgcaagctttagcgactatggcacaagtgttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagatgagg |
17787054 |
T |
|
| Q |
135 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgag |
234 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||| || ||||| | ||||||||||| |
|
|
| T |
17787053 |
ctcgataggttcttgaggaacaatccaccgactttaaaagggaggttcgacccagagggagcacagacttgggtgcagggtatggaacggattttccgag |
17786954 |
T |
|
| Q |
235 |
ctatggttacaggagatgaccaaaagg-ttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggcttgagt |
333 |
Q |
| |
|
|||||||||| ||| ||||||| |||| | ||||| |||||||||||| | ||||||||| | |||||||||||| |||||||| ||||| |||||| |
|
|
| T |
17786953 |
ctatggttacgggaaatgaccagaaggctcagactagcgactcatatgctagctgaggaagaagggcactggtggactaatgccaaaggaagacttgaga |
17786854 |
T |
|
| Q |
334 |
tggaaggtgatgtggtgacctgggctaagttcaaggttgaatt |
376 |
Q |
| |
|
||| ||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
17786853 |
tgggaggtgatgtggtgacctaggctaagttcaaggtcgaatt |
17786811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 35 - 376
Target Start/End: Complemental strand, 16104261 - 16103920
Alignment:
| Q |
35 |
aattgcgcaagctttagcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggagg |
134 |
Q |
| |
|
|||||||||||| |||||||| ||||| ||||| ||||||||||||||||||||||| |||| ||| ||||||||||| ||||||||||| |||||||| |
|
|
| T |
16104261 |
aattgcgcaagccttagcgacgatggcacaagtgttggcccagtcgaatgagaatgcagtgggtaatcgtaggaatgagggtgaggccgaggagaggaga |
16104162 |
T |
|
| Q |
135 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgag |
234 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||| ||||||||||| || ||||||| |||||||| || |
|
|
| T |
16104161 |
ctcgataggttcttgaggaacaatccatcgactttcaaagggaggttcgatccagagggagtacaaacttgggtgcagggtatggagcggattttccaag |
16104062 |
T |
|
| Q |
235 |
ctatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggcttgagtt |
334 |
Q |
| |
|
||||||| || ||||||||||| ||||| ||||| ||||||||| || | ||||||||||||||||||||||||| |||||||| ||||| ||||| | |
|
|
| T |
16104061 |
ctatggtgacgggagatgaccagaaggtcagactagcgactcatgtgcttgctgaggaagcggagcactggtggactaatgccaaaggaagacttgaaat |
16103962 |
T |
|
| Q |
335 |
ggaaggtgatgtggtgacctgggctaagttcaaggttgaatt |
376 |
Q |
| |
|
|| |||||||||||||||||||||||||||||| | |||||| |
|
|
| T |
16103961 |
gggaggtgatgtggtgacctgggctaagttcaaagctgaatt |
16103920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 35 - 376
Target Start/End: Complemental strand, 18421520 - 18421179
Alignment:
| Q |
35 |
aattgcgcaagctttagcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggagg |
134 |
Q |
| |
|
||||| ||||||||||||||||||||| ||||| || ||||| | |||||||||||||||||||| | |||||| ||||| |||||||||||||||||| |
|
|
| T |
18421520 |
aattgtgcaagctttagcgactatggcacaagtgttagcccaattaaatgagaatgcggtggctaatcataggaaggaaggagaggccgaagagaggagg |
18421421 |
T |
|
| Q |
135 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgag |
234 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| || ||||||| |||||||||| |
|
|
| T |
18421420 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccaaagggagcacagacttgggtgcagggaatggagcggattttccgat |
18421321 |
T |
|
| Q |
235 |
ctatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggcttgagtt |
334 |
Q |
| |
|
||||||| || | |||||||| ||||| ||||| |||||||||||| | || ||||||| |||||||||||||| |||||||| ||||| |||||| | |
|
|
| T |
18421320 |
ctatggtgacgagggatgaccagaaggtcagactagcgactcatatgcttgctaaggaagcagagcactggtggactaatgccaaaggaagacttgagat |
18421221 |
T |
|
| Q |
335 |
ggaaggtgatgtggtgacctgggctaagttcaaggttgaatt |
376 |
Q |
| |
|
|| ||||||||| |||||||||||||||||| |||||||||| |
|
|
| T |
18421220 |
gggaggtgatgttgtgacctgggctaagttccaggttgaatt |
18421179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 35 - 367
Target Start/End: Original strand, 21411851 - 21412183
Alignment:
| Q |
35 |
aattgcgcaagctttagcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggagg |
134 |
Q |
| |
|
|||||| ||||| |||||| | ||||| || || |||| ||||||||||||||||||||||||| ||| | || || || || || || ||| ||||| |
|
|
| T |
21411851 |
aattgcacaagccttagcggcgatggctcaggtgttggttcagtcgaatgagaatgcggtggctagtcgtcgaaacgagggggaagctgaggagcggagg |
21411950 |
T |
|
| Q |
135 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgag |
234 |
Q |
| |
|
|||||| |||||||| ||||||||| ||||| |||||||||||||||| | |||||| || |||||||||||||| || ||||||| ||| || || | |
|
|
| T |
21411951 |
ctcgatcggttcttgcggaacaatctgccgacgatcaaagggaggttcgacctagagggagctcagacttgggtgcagggcatggagcggatatttcgtg |
21412050 |
T |
|
| Q |
235 |
ctatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggcttgagtt |
334 |
Q |
| |
|
||||||| || |||||||||||||||| ||| |||||||||||||| | ||||||| || ||| |||||||||| |||| ||| ||||| ||||| | |
|
|
| T |
21412051 |
ctatggtgacgggagatgaccaaaaggccagattggcgactcatatgcttgctgaggaggctgagtactggtggactaatgtcaaaggaagatttgagat |
21412150 |
T |
|
| Q |
335 |
ggaaggtgatgtggtgacctgggctaagttcaa |
367 |
Q |
| |
|
|| ||| || || ||||||||||| |||||||| |
|
|
| T |
21412151 |
gggaggagaagttgtgacctgggcgaagttcaa |
21412183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 332
Target Start/End: Original strand, 16378793 - 16378995
Alignment:
| Q |
130 |
ggaggctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagatttt |
229 |
Q |
| |
|
||||||| ||| | |||||| | ||||||||||| || ||||| || |||||||| || || || || || || ||| ||||||| |||||| ||| || |
|
|
| T |
16378793 |
ggaggcttgatcgtttcttgcgaaacaatccacctacgttcaagggaaggttcgacccggatggagctcaaacatggttgcaaggcatggagaggatctt |
16378892 |
T |
|
| Q |
230 |
ccgagctatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggctt |
329 |
Q |
| |
|
|| |||||||| || | ||||| || ||||| || |||| ||||| ||| | ||||||| || ||| | |||||||||||||| |||||||| ||| |
|
|
| T |
16378893 |
tcgtgctatggtgactagtgatgatcagaaggtgaggttggctactcacatgcttgctgaggaggctgagtattggtggaccaatgctaagggaagactt |
16378992 |
T |
|
| Q |
330 |
gag |
332 |
Q |
| |
|
||| |
|
|
| T |
16378993 |
gag |
16378995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 238; Significance: 1e-131; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 35 - 376
Target Start/End: Complemental strand, 15000745 - 15000404
Alignment:
| Q |
35 |
aattgcgcaagctttagcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggagg |
134 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||| ||||||||||||||||||||| |||||||||| ||||||| |
|
|
| T |
15000745 |
aattgcgcaagctttagcgactatggcacaagttttggctcaagcgaatgagaatacggcggctaaccgtaggaatgaaggcgaggccgaagggaggagg |
15000646 |
T |
|
| Q |
135 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgag |
234 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||| ||||||||||| |
|
|
| T |
15000645 |
ctcgataggttcttaaggaacaatccaccgactttcaaagggaggttcgatccagagggagcacagacttgggtgcagggaatggagcggattttccgag |
15000546 |
T |
|
| Q |
235 |
ctatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggcttgagtt |
334 |
Q |
| |
|
|||||||||| ||||||||| | ||||| ||||| |||||||||||||| |||||||||| ||| |||||||||||||||||||||| ||||||||||| |
|
|
| T |
15000545 |
ctatggttacgggagatgactagaaggtcagactagcgactcatatgttagctgaggaagcagagtactggtggaccaatgccaagggcaggcttgagtt |
15000446 |
T |
|
| Q |
335 |
ggaaggtgatgtggtgacctgggctaagttcaaggttgaatt |
376 |
Q |
| |
|
|| |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
15000445 |
ggggggtgatgtggtgacctgggccaagttcaaggttgaatt |
15000404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 332
Target Start/End: Original strand, 15289433 - 15289635
Alignment:
| Q |
130 |
ggaggctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagatttt |
229 |
Q |
| |
|
||||||| ||| | |||||| | ||||||||||| || ||||| || |||||||| ||||| || || ||||| ||| ||||||| |||||| ||| || |
|
|
| T |
15289433 |
ggaggcttgatcgtttcttgcgaaacaatccacctacgttcaagggaaggttcgacccagatggagctcagacatggttgcaaggcatggagaggatctt |
15289532 |
T |
|
| Q |
230 |
ccgagctatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggctt |
329 |
Q |
| |
|
|| |||||||| || | ||||| || ||||| || |||| ||||| ||| | ||||||| || ||| | ||| |||||||||| |||||||| ||| |
|
|
| T |
15289533 |
tcgtgctatggtgactagtgatgatcagaaggtgaggttggctactcacatgcttgctgaggaggctgagtattggcggaccaatgctaagggaagactt |
15289632 |
T |
|
| Q |
330 |
gag |
332 |
Q |
| |
|
||| |
|
|
| T |
15289633 |
gag |
15289635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 38
Target Start/End: Original strand, 421452 - 421483
Alignment:
| Q |
7 |
aattcttacattgtatcagccagtgttgaatt |
38 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
421452 |
aattcttacattgtatcagccagtgttgaatt |
421483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0615 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: scaffold0615
Description:
Target: scaffold0615; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 35 - 376
Target Start/End: Original strand, 8572 - 8913
Alignment:
| Q |
35 |
aattgcgcaagctttagcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggagg |
134 |
Q |
| |
|
|||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
8572 |
aattgcgcaagccttggcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccataggaatgaaggtgaggcctaagagaggaga |
8671 |
T |
|
| Q |
135 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgag |
234 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| || ||||||| ||||||||||| |
|
|
| T |
8672 |
ctagataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccaaggggggcacagacttggatgcagggtatggagcggattttccgag |
8771 |
T |
|
| Q |
235 |
ctatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggcttgagtt |
334 |
Q |
| |
|
|||||||||| | ||||||||| ||||| || || ||||||||||||||||||||||| || |||||||||||||| | ||||| ||||| | |||||| |
|
|
| T |
8772 |
ctatggttacggaagatgaccagaaggtcaggctagcgactcatatgttgactgaggaggcagagcactggtggactagcgccaaaggaagacatgagtt |
8871 |
T |
|
| Q |
335 |
ggaaggtgatgtggtgacctgggctaagttcaaggttgaatt |
376 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8872 |
gggaggtgatgtggtgacctgggctaagttcaaggttgaatt |
8913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0225 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: scaffold0225
Description:
Target: scaffold0225; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 35 - 376
Target Start/End: Complemental strand, 27517 - 27176
Alignment:
| Q |
35 |
aattgcgcaagctttagcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggagg |
134 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
27517 |
aattgcgcaagctttagcgactatggcgcaagttttggctcaagcgaatgagaatacggcagctaaccataggaatgaaggtgaggccgaagagaggagg |
27418 |
T |
|
| Q |
135 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgag |
234 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||| |||||||||| ||||||||||| |
|
|
| T |
27417 |
ctcgatagattcttgaggaacaatccaccgactttcaatgggaggttcgatccagagggaggacagacttgggtgcaggggatggagcggattttccgag |
27318 |
T |
|
| Q |
235 |
ctatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggcttgagtt |
334 |
Q |
| |
|
|||||||||| ||||||||||| ||||| ||| | |||||||||||| | |||||||||| ||| ||||||||||||||||||| ||||| |||||| | |
|
|
| T |
27317 |
ctatggttacgggagatgaccagaaggtcagattagcgactcatatgctagctgaggaagcagagtactggtggaccaatgccaaaggaagacttgagat |
27218 |
T |
|
| Q |
335 |
ggaaggtgatgtggtgacctgggctaagttcaaggttgaatt |
376 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
27217 |
gggaggtgatgtggtgacctgggctaagttcaagtttgaatt |
27176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 35 - 376
Target Start/End: Original strand, 7619 - 7960
Alignment:
| Q |
35 |
aattgcgcaagctttagcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggagg |
134 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||| || ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7619 |
aattccgcaagctttagcgactatggcgcaagttttggctcaagcgaatgagaatacggcggctaaccgtaggaatgaaggtgaggccgaagagaggagg |
7718 |
T |
|
| Q |
135 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgag |
234 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| | |||||||||| ||||||||||| |
|
|
| T |
7719 |
ctcgataggttcttaaggaacaatccaccgactttcaaagggaggttcgatccaaagggagcacagacttgggtgtaggggatggagcggattttccgag |
7818 |
T |
|
| Q |
235 |
ctatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggcttgagtt |
334 |
Q |
| |
|
|||||||||| ||||||||||| ||||| | ||| |||||||||||| | |||||||||| |||||| ||||||||||||||| || ||||||||||| |
|
|
| T |
7819 |
ctatggttacgggagatgaccagaaggtcaaactagcgactcatatgctagctgaggaagcatagcactagtggaccaatgccaaaggcaggcttgagtt |
7918 |
T |
|
| Q |
335 |
ggaaggtgatgtggtgacctgggctaagttcaaggttgaatt |
376 |
Q |
| |
|
|| |||||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
7919 |
gggaggtgatgaggtgacctgggctatgttcaaggttgaatt |
7960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0467 (Bit Score: 221; Significance: 1e-121; HSPs: 2)
Name: scaffold0467
Description:
Target: scaffold0467; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 36 - 376
Target Start/End: Original strand, 12515 - 12855
Alignment:
| Q |
36 |
attgcgcaagctttagcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggaggc |
135 |
Q |
| |
|
|||||||||||||||||| ||||||| ||||||||||| || | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
12515 |
attgcgcaagctttagcggctatggcacaagttttggctcaagcaaatgagaatgcggtggctaaccgtaggaatgaaggtggggccgaagagaggaggc |
12614 |
T |
|
| Q |
136 |
tcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgagc |
235 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| || ||||| |||||||||||||| |||||||||||||| | |||||||||| |||||||||||| |
|
|
| T |
12615 |
tcgatagcttcttgaggaacaatccaccgactttaaaggggagattcgatccagagggagcacagacttgggtctaggggatggagcggattttccgagc |
12714 |
T |
|
| Q |
236 |
tatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggcttgagttg |
335 |
Q |
| |
|
||||||||| ||||||||||| ||||| |||||||||||||||||| | |||||||||| |||||||||||| | |||||||| ||||| |||||| || |
|
|
| T |
12715 |
tatggttacgggagatgaccagaaggtcagactggcgactcatatgctagctgaggaagcagagcactggtgggctaatgccaaaggaagacttgagatg |
12814 |
T |
|
| Q |
336 |
gaaggtgatgtggtgacctgggctaagttcaaggttgaatt |
376 |
Q |
| |
|
| |||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
12815 |
ggaggtgatgtggtgaactgggctaagttcaaggttgaatt |
12855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0467; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 232 - 376
Target Start/End: Original strand, 1 - 145
Alignment:
| Q |
232 |
gagctatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggcttga |
331 |
Q |
| |
|
||||||||||||| ||||||||||| ||||| |||||||||||||||||| | |||||||||| |||||||||||| | |||||||| ||||| ||||| |
|
|
| T |
1 |
gagctatggttacgggagatgaccagaaggtcagactggcgactcatatgctagctgaggaagcagagcactggtgggctaatgccaaaggaagacttga |
100 |
T |
|
| Q |
332 |
gttggaaggtgatgtggtgacctgggctaagttcaaggttgaatt |
376 |
Q |
| |
|
| ||| |||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
101 |
gatgggaggtgatgtggtgaactgggctaagttcaaggttgaatt |
145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 36 - 376
Target Start/End: Original strand, 21846961 - 21847301
Alignment:
| Q |
36 |
attgcgcaagctttagcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggaggc |
135 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||||| | || ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21846961 |
attgcacaagctttagcgactatggcacaagttttgactcaagcgaatgagaatacggcggctaaccgtaggaatgaaggtgaggccgaagagaggaggc |
21847060 |
T |
|
| Q |
136 |
tcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgagc |
235 |
Q |
| |
|
| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| || ||||||| |||||||| ||| |
|
|
| T |
21847061 |
ttgataggttcttaaggaacaatccaccgactttcaaggggaggttcgatccagagggagcacagacttgggtgcagggaatggagcggattttccaagc |
21847160 |
T |
|
| Q |
236 |
tatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggcttgagttg |
335 |
Q |
| |
|
||||||||| || |||||||| ||||| ||| |||||||||||||| | |||||||||| ||| |||||||||||||||||||||| || ||||||||| |
|
|
| T |
21847161 |
tatggttactggtgatgaccagaaggtcagattggcgactcatatgctagctgaggaagcagagtactggtggaccaatgccaagggcagacttgagttg |
21847260 |
T |
|
| Q |
336 |
gaaggtgatgtggtgacctgggctaagttcaaggttgaatt |
376 |
Q |
| |
|
||||||| ||| ||||||||||| ||||||||||||||||| |
|
|
| T |
21847261 |
gaaggtggtgttgtgacctgggccaagttcaaggttgaatt |
21847301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 121 - 376
Target Start/End: Original strand, 20649064 - 20649319
Alignment:
| Q |
121 |
ccgaagagaggaggctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatgga |
220 |
Q |
| |
|
|||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||| |
|
|
| T |
20649064 |
ccgatgaggggaggctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggagcacagacttgggtgcagggcatgga |
20649163 |
T |
|
| Q |
221 |
gcagattttccgagctatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaag |
320 |
Q |
| |
|
|| | |||| ||||||||||| || ||||||||||| ||||| |||||||||||||||||| | |||||||||| ||||||| |||||| |||||||| |
|
|
| T |
20649164 |
gcgggtttttcgagctatggtgacgggagatgaccagaaggtcagactggcgactcatatgcttgctgaggaagcagagcacttgtggactaatgccaaa |
20649263 |
T |
|
| Q |
321 |
ggaaggcttgagttggaaggtgatgtggtgacctgggctaagttcaaggttgaatt |
376 |
Q |
| |
|
||||| |||||||||| ||||||||| ||||||||||| |||||||| |||||||| |
|
|
| T |
20649264 |
ggaagacttgagttgggaggtgatgttgtgacctgggcgaagttcaaagttgaatt |
20649319 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 35 - 232
Target Start/End: Original strand, 9951000 - 9951197
Alignment:
| Q |
35 |
aattgcgcaagctttagcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggagg |
134 |
Q |
| |
|
|||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
9951000 |
aattgcacaagctttagcgactatggcacaagtgttggcccagtcgaatgagaatgcggtggctaaccgtagaaatgaaggtgaggccgaagagaggagg |
9951099 |
T |
|
| Q |
135 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccg |
232 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||| || ||||| ||||||||||| |
|
|
| T |
9951100 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccaaagggagtacagacttgggtgcagggtatggaacagattttccg |
9951197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 130 - 332
Target Start/End: Original strand, 21193270 - 21193472
Alignment:
| Q |
130 |
ggaggctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagatttt |
229 |
Q |
| |
|
||||||||||| | |||||| |||||||||| ||||| | ||| ||||||||||| || ||||| || || ||||||||||| || |||||| ||| || |
|
|
| T |
21193270 |
ggaggctcgatcgtttcttgcggaacaatccgccgacgtacaatgggaggttcgacccggagggagctcaaacttgggtgcagggcatggagaggatatt |
21193369 |
T |
|
| Q |
230 |
ccgagctatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggctt |
329 |
Q |
| |
|
| |||||||| || | |||||||| ||||| ||| || ||||||||||| | ||||||| || || | ||||||||||||||||||||||| ||| |
|
|
| T |
21193370 |
ttgtgctatggtgacgagtgatgaccagaaggtcagattgacgactcatatgcttgctgaggaggccgaatattggtggaccaatgccaagggaagactt |
21193469 |
T |
|
| Q |
330 |
gag |
332 |
Q |
| |
|
||| |
|
|
| T |
21193470 |
gag |
21193472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 343 - 376
Target Start/End: Complemental strand, 16415935 - 16415902
Alignment:
| Q |
343 |
atgtggtgacctgggctaagttcaaggttgaatt |
376 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| |
|
|
| T |
16415935 |
atgtggtgacctcggctaagttcaaggttgaatt |
16415902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 43 - 376
Target Start/End: Complemental strand, 22281803 - 22281487
Alignment:
| Q |
43 |
aagctttagcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggaggctcgatag |
142 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||| | ||| |||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
22281803 |
aagctttagcgactatggcgcaagttttggcccagtcgattgagaatgtgatggttaaccgtaggaatgaaggtgaggctgaagagaggaggctcgatag |
22281704 |
T |
|
| Q |
143 |
gttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgagctatggtt |
242 |
Q |
| |
|
||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||| |
|
|
| T |
22281703 |
gttcttgaggaacaatccaccgaatttcaaaggg-----------------ggcacagacttgggtgcaggggatggagcggattttccgagctatggtt |
22281621 |
T |
|
| Q |
243 |
acaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggcttgagttggaaggtg |
342 |
Q |
| |
|
|| ||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||| ||||| |
|
|
| T |
22281620 |
acgggagatgaccagaaggtcagactggcgactcatatgttgactgaggaagcagagcactggtggaccaatgccaaaggaaggcttgagatgggaggtg |
22281521 |
T |
|
| Q |
343 |
atgtggtgacctgggctaagttcaaggttgaatt |
376 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| |
|
|
| T |
22281520 |
atgtggtaacctgggctaagttcaaggttgaatt |
22281487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0673 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: scaffold0673
Description:
Target: scaffold0673; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 35 - 376
Target Start/End: Original strand, 4554 - 4894
Alignment:
| Q |
35 |
aattgcgcaagctttagcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggagg |
134 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||| || | ||||||||||||||||||||||||||||||| |
|
|
| T |
4554 |
aattgcgcaagctttagctactatggcgcaagtgttggcccagtcgaatgagaatgtggtggcaaatcataggaatgaaggtgaggccgaagagaggagg |
4653 |
T |
|
| Q |
135 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgag |
234 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||| ||||||||||| || ||||| ||||||||| ||| |
|
|
| T |
4654 |
ctcgataggttcttgaggaacaatccaccgactttcaaatggaggttcaatccagagggagcacgaacttgggtgcagggcatggaacagattttctgag |
4753 |
T |
|
| Q |
235 |
ctatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggcttgagtt |
334 |
Q |
| |
|
|| |||| |||||||||||||| ||||| |||||||||||||| ||| | |||||||||| ||||||| || ||| |||| ||| |||||| ||||| | |
|
|
| T |
4754 |
ctgtggtcacaggagatgaccagaaggtcagactggcgactcaaatgcttgctgaggaagcagagcactagttgactaatgtcaaaggaagg-ttgagat |
4852 |
T |
|
| Q |
335 |
ggaaggtgatgtggtgacctgggctaagttcaaggttgaatt |
376 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4853 |
gggaggtgatgtggtgacctgggctaagttcaaggttgaatt |
4894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0465 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: scaffold0465
Description:
Target: scaffold0465; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 35 - 314
Target Start/End: Original strand, 11842 - 12121
Alignment:
| Q |
35 |
aattgcgcaagctttagcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggagg |
134 |
Q |
| |
|
|||||||||| |||||||||||||| |||| |||||||| ||||| |||||||||| ||||||||||||||||||||| |||||||||||||||| |||| |
|
|
| T |
11842 |
aattgcgcaaactttagcgactatgacgcatgttttggcacagtcaaatgagaatgtggtggctaaccgtaggaatgatggtgaggccgaagagaagagg |
11941 |
T |
|
| Q |
135 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgag |
234 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||| |||| |||||||||||| |||||||||| ||||||||||| |
|
|
| T |
11942 |
ctcgataggttcttgaggaacaatccaccgactttcaaggggaggttagatttagagggagcacggacttgggtgcaggggatggagcggattttccgag |
12041 |
T |
|
| Q |
235 |
ctatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaat |
314 |
Q |
| |
|
|||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
12042 |
ctatggttacgggagatgaccagaaggtcagactggcgactcatatgttgactgaggaagcagagcactggtggaccaat |
12121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0120 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: scaffold0120
Description:
Target: scaffold0120; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 35 - 376
Target Start/End: Complemental strand, 26299 - 25958
Alignment:
| Q |
35 |
aattgcgcaagctttagcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggagg |
134 |
Q |
| |
|
|||||||||||| |||||||| ||||| ||||| |||||||||||||||||||||||||||||||| | ||||| || ||||||| ||| |||||||| |
|
|
| T |
26299 |
aattgcgcaagccttagcgacgatggcacaagtgttggcccagtcgaatgagaatgcggtggctaattgcaggaacgagggtgaggtcgaggagaggaga |
26200 |
T |
|
| Q |
135 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgag |
234 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| || |||| | ||||||||||| |
|
|
| T |
26199 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggtttgatccagagggagcacagacttgggtgcagggtatggggtggattttccgag |
26100 |
T |
|
| Q |
235 |
ctatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggcttgagtt |
334 |
Q |
| |
|
||||||| |||||||||||||| ||||| ||||| |||||||||||| | ||||||||| |||||||||||||| |||||||| ||||| |||||| | |
|
|
| T |
26099 |
ctatggtgacaggagatgaccagaaggtcagactagcgactcatatgcttgttgaggaagcagagcactggtggactaatgccaaaggaagacttgagat |
26000 |
T |
|
| Q |
335 |
ggaaggtgatgtggtgacctgggctaagttcaaggttgaatt |
376 |
Q |
| |
|
|| |||| |||||||||| |||||||||||||| |||||||| |
|
|
| T |
25999 |
gggaggtaatgtggtgacttgggctaagttcaaagttgaatt |
25958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0462 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: scaffold0462
Description:
Target: scaffold0462; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 35 - 367
Target Start/End: Complemental strand, 3832 - 3500
Alignment:
| Q |
35 |
aattgcgcaagctttagcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggagg |
134 |
Q |
| |
|
||||||| |||| |||||||| ||| | ||||| |||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||| |||||||| |
|
|
| T |
3832 |
aattgcgaaagccttagcgacgatgacacaagtgttggcccagtcgaatgagaatgcgatggctaatcgtaggaatgagggtgaggccgatgagaggaga |
3733 |
T |
|
| Q |
135 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgag |
234 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||| ||||| ||||||||||| || ||||||| ||||||||||| |
|
|
| T |
3732 |
ctcgataggttcttgacgaacaatccactgactttcaaagggaggttcgatctagagggagcacaaacttgggtgcagggtatggagcggattttccgag |
3633 |
T |
|
| Q |
235 |
ctatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggcttgagtt |
334 |
Q |
| |
|
||||||| || ||||||||||| ||||| ||||| |||||||||||| | |||||||||| ||| ||| |||||| |||||||| ||||| |||||| | |
|
|
| T |
3632 |
ctatggtgacgggagatgaccagaaggtcagactagcgactcatatgcttgctgaggaagcagagaactagtggactaatgccaaaggaagacttgagat |
3533 |
T |
|
| Q |
335 |
ggaaggtgatgtggtgacctgggctaagttcaa |
367 |
Q |
| |
|
|| |||||||||||||||||||||||||||||| |
|
|
| T |
3532 |
gggaggtgatgtggtgacctgggctaagttcaa |
3500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0610 (Bit Score: 182; Significance: 3e-98; HSPs: 1)
Name: scaffold0610
Description:
Target: scaffold0610; HSP #1
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 35 - 376
Target Start/End: Original strand, 3109 - 3450
Alignment:
| Q |
35 |
aattgcgcaagctttagcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggagg |
134 |
Q |
| |
|
|||||| ||||| |||||| | ||||| ||||| ||||||||||| ||||||||||| |||||||| ||| |||||||||| ||||| || ||| ||||| |
|
|
| T |
3109 |
aattgcacaagccttagcggcgatggctcaagtgttggcccagtctaatgagaatgcagtggctaatcgtcggaatgaaggcgaggctgaggagcggagg |
3208 |
T |
|
| Q |
135 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgag |
234 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| || ||||||| ||| |||| | |
|
|
| T |
3209 |
ctcgatcggttcttgaggaacaatccaccgattttcaaagggaggttcgatccagagggagcacagacttgggtgcagggcatggagcggatattccatg |
3308 |
T |
|
| Q |
235 |
ctatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggcttgagtt |
334 |
Q |
| |
|
||||||| || ||||||||||| ||||||||| |||||||||||||| | |||||||||||||||||||||||||| |||||||||||||| ||||| | |
|
|
| T |
3309 |
ctatggtgacgggagatgaccagaaggttagattggcgactcatatgcttactgaggaagcggagcactggtggactaatgccaagggaagacttgatat |
3408 |
T |
|
| Q |
335 |
ggaaggtgatgtggtgacctgggctaagttcaaggttgaatt |
376 |
Q |
| |
|
|| |||||| || |||||||||| |||||||| | |||||| |
|
|
| T |
3409 |
gggaggtgaagttgtgacctgggaaaagttcaaagctgaatt |
3450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0162 (Bit Score: 170; Significance: 4e-91; HSPs: 1)
Name: scaffold0162
Description:
Target: scaffold0162; HSP #1
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 35 - 308
Target Start/End: Complemental strand, 16910 - 16637
Alignment:
| Q |
35 |
aattgcgcaagctttagcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggagg |
134 |
Q |
| |
|
||||||| ||||||||||||||||||| ||||||||||||||| | ||||||||||| |||||||| || |||||||| ||||||||| ||||||||||| |
|
|
| T |
16910 |
aattgcggaagctttagcgactatggcacaagttttggcccaggcaaatgagaatgcagtggctaatcggaggaatgagggtgaggccaaagagaggagg |
16811 |
T |
|
| Q |
135 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgag |
234 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| || ||||||| ||||||||||| |
|
|
| T |
16810 |
cttgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatctagagggagcacagacttgggtgcagggtatggagcggattttccgag |
16711 |
T |
|
| Q |
235 |
ctatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtgg |
308 |
Q |
| |
|
|||||||||| ||||||||||| ||||| ||||| || ||||||||| | |||| | ||||||||||||||| |
|
|
| T |
16710 |
ctatggttacgggagatgaccataaggtcagactagcaactcatatgctaggtgagaaggcggagcactggtgg |
16637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 119; Significance: 1e-60; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 35 - 281
Target Start/End: Original strand, 16574962 - 16575208
Alignment:
| Q |
35 |
aattgcgcaagctttagcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggagg |
134 |
Q |
| |
|
|||||| ||||| |||| | | ||||| ||||| ||||||||||||||||||||||| |||||||| ||| |||| ||||| || ||||| ||| ||||| |
|
|
| T |
16574962 |
aattgcacaagccttagtggcgatggctcaagtgttggcccagtcgaatgagaatgcagtggctaatcgtcggaacgaaggagaagccgaggagcggagg |
16575061 |
T |
|
| Q |
135 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgag |
234 |
Q |
| |
|
|||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||| || ||||||| ||| |||| | |
|
|
| T |
16575062 |
ctcgatcggttcttgaggaaaaatccaccgactttcaaagggaggttcgatccagagggagcacagacttaggtgcagggcatggagcggatattccatg |
16575161 |
T |
|
| Q |
235 |
ctatggttacaggagatgaccaaaaggttagactggcgactcatatg |
281 |
Q |
| |
|
| ||||| | ||||||||||| ||||| |||||||| ||||||||| |
|
|
| T |
16575162 |
ccatggtgatgggagatgaccagaaggtcagactggcaactcatatg |
16575208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 35 - 281
Target Start/End: Complemental strand, 16590700 - 16590454
Alignment:
| Q |
35 |
aattgcgcaagctttagcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggagg |
134 |
Q |
| |
|
|||||| ||||| |||| | | ||||| ||||| ||||||||||||||||||||||| |||||||| ||| |||| ||||| || ||||| ||| ||||| |
|
|
| T |
16590700 |
aattgcacaagccttagtggcgatggctcaagtgttggcccagtcgaatgagaatgcagtggctaatcgtcggaacgaaggagaagccgaggagcggagg |
16590601 |
T |
|
| Q |
135 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgag |
234 |
Q |
| |
|
|||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||| || ||||||| ||| |||| | |
|
|
| T |
16590600 |
ctcgatcggttcttgaggaaaaatccaccgactttcaaagggaggttcgatccagagggagcacagacttaggtgcagggcatggagcggatattccatg |
16590501 |
T |
|
| Q |
235 |
ctatggttacaggagatgaccaaaaggttagactggcgactcatatg |
281 |
Q |
| |
|
| ||||| | ||||||||||| ||||| |||||||| ||||||||| |
|
|
| T |
16590500 |
ccatggtgatgggagatgaccagaaggtcagactggcaactcatatg |
16590454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 332
Target Start/End: Complemental strand, 7827886 - 7827684
Alignment:
| Q |
130 |
ggaggctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagatttt |
229 |
Q |
| |
|
||||||| ||| | |||||| | ||||||||||| || ||||| || |||||||| || || || || || || ||| ||||||| |||||| ||| || |
|
|
| T |
7827886 |
ggaggcttgatcgtttcttgcgaaacaatccacctacgttcaagggaaggttcgacccggatggagctcaaacatggttgcaaggcatggagaggatctt |
7827787 |
T |
|
| Q |
230 |
ccgagctatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggctt |
329 |
Q |
| |
|
|| |||||||| || | ||||| || ||||| || |||| ||||| ||| | ||||||| || ||| | |||||||||||||| |||||||| ||| |
|
|
| T |
7827786 |
tcgtgctatggtgactagtgatgatcagaaggtgaggttggctactcacatgcttgctgaggaggctgagtattggtggaccaatgctaagggaagactt |
7827687 |
T |
|
| Q |
330 |
gag |
332 |
Q |
| |
|
||| |
|
|
| T |
7827686 |
gag |
7827684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 332
Target Start/End: Original strand, 27104058 - 27104260
Alignment:
| Q |
130 |
ggaggctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagatttt |
229 |
Q |
| |
|
||||||| ||| | |||||| | ||||||||||| || ||||| || |||||||| || || || || || || ||| ||||||| |||||| ||| || |
|
|
| T |
27104058 |
ggaggcttgatcgtttcttgcgaaacaatccacctacgttcaagggaaggttcgacccggatggagctcaaacatggttgcaaggcatggagaggatctt |
27104157 |
T |
|
| Q |
230 |
ccgagctatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggctt |
329 |
Q |
| |
|
|| |||||||| || | ||||| || ||||| || |||| ||||| ||| | ||||||| || ||| | |||||||||||||| |||||||| ||| |
|
|
| T |
27104158 |
tcgtgctatggtgactagtgatgatcagaaggtgaggttggctactcacatgcttgctgaggaggctgagtattggtggaccaatgctaagggaagactt |
27104257 |
T |
|
| Q |
330 |
gag |
332 |
Q |
| |
|
||| |
|
|
| T |
27104258 |
gag |
27104260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0021 (Bit Score: 118; Significance: 4e-60; HSPs: 2)
Name: scaffold0021
Description:
Target: scaffold0021; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 35 - 376
Target Start/End: Complemental strand, 9278 - 8937
Alignment:
| Q |
35 |
aattgcgcaagctttagcgactatggcgcaagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggagg |
134 |
Q |
| |
|
|||||| ||||| ||| |||| ||||| || || ||||||||||||| ||||||||| ||||| || ||| |||| ||||| |||||||| ||| ||||| |
|
|
| T |
9278 |
aattgcacaagccttaccgacgatggctcaggtgttggcccagtcgattgagaatgcagtggcgaatcgtcggaacgaaggggaggccgaggagcggagg |
9179 |
T |
|
| Q |
135 |
ctcgataggttcttgaggaacaatccaccgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgag |
234 |
Q |
| |
|
|||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||| || |||||||| || | ||||| ||| ||| | | |
|
|
| T |
9178 |
ctcgatcggttcttgaggaacaatccatcgactttcagagggaggttcgatccagagggagcacaaacgtgggtgcagggcacggagcggatattcggtg |
9079 |
T |
|
| Q |
235 |
ctatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggcttgagtt |
334 |
Q |
| |
|
||||||| || |||| ||| || ||||| | ||||||||||| |||| | ||||||||| ||||||| ||||| |||||||| ||||| ||||| | |
|
|
| T |
9078 |
ctatggtgacgggaggtgatcagaaggtcaaactggcgactcgtatgcttgttgaggaagctgagcactattggactaatgccaaaggaagaattgagat |
8979 |
T |
|
| Q |
335 |
ggaaggtgatgtggtgacctgggctaagttcaaggttgaatt |
376 |
Q |
| |
|
|| |||| | || ||||||||||| |||||||| | |||||| |
|
|
| T |
8978 |
gggaggtaaagttgtgacctgggcgaagttcaaagctgaatt |
8937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0021; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 338 - 376
Target Start/End: Complemental strand, 91320 - 91282
Alignment:
| Q |
338 |
aggtgatgtggtgacctgggctaagttcaaggttgaatt |
376 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
91320 |
aggtgatgtggtgacctgggctaagttcaaggttgaatt |
91282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0009 (Bit Score: 104; Significance: 9e-52; HSPs: 1)
Name: scaffold0009
Description:
Target: scaffold0009; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 63 - 334
Target Start/End: Complemental strand, 97618 - 97347
Alignment:
| Q |
63 |
caagttttggcccagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggaggctcgataggttcttgaggaacaatccac |
162 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||||| ||| ||| ||||| ||||| || ||| | || || ||| ||||||||||||||||||||| |
|
|
| T |
97618 |
caagtgttggcccagtcgaatgagaatgcagtggctagtcgtcagaacgaaggggaggctgaggagcgaagtcttgatcggttcttgaggaacaatccac |
97519 |
T |
|
| Q |
163 |
cgactttcaaagggaggttcgatccagagggggcacagacttgggtgcaagggatggagcagattttccgagctatggttacaggagatgaccaaaaggt |
262 |
Q |
| |
|
|||| ||| | |||||||| ||||||||||| || ||||||||||| || | ||||||| ||| ||||| |||||||| || ||||||||||| ||||| |
|
|
| T |
97518 |
cgacattcgaggggaggtttgatccagagggagcccagacttgggtacagagcatggagcggatattccgtgctatggtgacgggagatgaccagaaggt |
97419 |
T |
|
| Q |
263 |
tagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatgccaagggaaggcttgagtt |
334 |
Q |
| |
|
||| |||||||||||||| | |||||||||| ||||| |||||||| |||||||| |||| |||||||| |
|
|
| T |
97418 |
cagattggcgactcatatgcttgctgaggaagctgagcagtggtggactaatgccaaaagaagacttgagtt |
97347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0218 (Bit Score: 89; Significance: 8e-43; HSPs: 1)
Name: scaffold0218
Description:
Target: scaffold0218; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 216 - 376
Target Start/End: Original strand, 315 - 475
Alignment:
| Q |
216 |
atggagcagattttccgagctatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaagcggagcactggtggaccaatg |
315 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||||||||| | ||||| | ||| || ||||||||| | |||| ||||| |||||||||||||| || | |
|
|
| T |
315 |
atggagcggattttccgagctatggttacgggagatgactagaaggtcaaacttgcaactcatatgctagctgaagaagcagagcactggtggacaaacg |
414 |
T |
|
| Q |
316 |
ccaagggaaggcttgagttggaaggtgatgtggtgacctgggctaagttcaaggttgaatt |
376 |
Q |
| |
|
|||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
415 |
ccaaaggaaggcttgagttgggaggtgatgtggtgacctgggctacgttcaaggttgaatt |
475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0138 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0138
Description:
Target: scaffold0138; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 219
Target Start/End: Original strand, 24924 - 25068
Alignment:
| Q |
75 |
cagtcgaatgagaatgcggtggctaaccgtaggaatgaaggtgaggccgaagagaggaggctcgataggttcttgaggaacaatccaccgactttcaaag |
174 |
Q |
| |
|
||||| ||||| |||||||| |||| ||| |||||| || || || || ||| ||||||| ||| | |||||| | ||||||||||| || ||||| | |
|
|
| T |
24924 |
cagtccaatgaaaatgcggtagctagtcgtcagaatgagggagaagctgaggagcggaggcttgatcgtttcttgcgaaacaatccacctacgttcaagg |
25023 |
T |
|
| Q |
175 |
ggaggttcgatccagagggggcacagacttgggtgcaagggatgg |
219 |
Q |
| |
|
| ||||| || || ||||| || ||||| ||||||||||| |||| |
|
|
| T |
25024 |
gaaggtttgacccggagggagctcagacatgggtgcaaggcatgg |
25068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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