View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: F9319-LTR4-TNT-insertion-1 (Length: 304)

Name: F9319-LTR4-TNT-insertion-1
Description: F9319-LTR4
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] F9319-LTR4-TNT-insertion-1
F9319-LTR4-TNT-insertion-1
[»] chr7 (43 HSPs)
chr7 (10-241)||(6697112-6697343)
chr7 (114-215)||(8150016-8150117)
chr7 (110-220)||(14648861-14648974)
chr7 (106-223)||(32346567-32346684)
chr7 (120-223)||(3667832-3667935)
chr7 (118-223)||(2849304-2849409)
chr7 (117-167)||(32971969-32972019)
chr7 (118-226)||(23058865-23058972)
chr7 (111-223)||(32776032-32776145)
chr7 (109-216)||(43007950-43008059)
chr7 (111-223)||(9658887-9658999)
chr7 (116-224)||(33773994-33774102)
chr7 (115-226)||(5724658-5724768)
chr7 (117-223)||(23111040-23111147)
chr7 (117-223)||(29996980-29997087)
chr7 (117-223)||(47238266-47238373)
chr7 (117-179)||(21446530-21446592)
chr7 (116-224)||(37490569-37490677)
chr7 (111-223)||(34064264-34064376)
chr7 (111-174)||(17494445-17494508)
chr7 (111-174)||(17558706-17558769)
chr7 (110-223)||(40023672-40023785)
chr7 (111-182)||(22617981-22618050)
chr7 (137-226)||(2842023-2842113)
chr7 (116-224)||(7425828-7425937)
chr7 (112-224)||(11616610-11616721)
chr7 (112-221)||(27234554-27234662)
chr7 (111-223)||(37264362-37264473)
chr7 (111-175)||(3105101-3105165)
chr7 (117-173)||(27621937-27621993)
chr7 (158-224)||(1643330-1643397)
chr7 (117-168)||(49100455-49100505)
chr7 (188-226)||(17266073-17266111)
chr7 (110-223)||(29645179-29645292)
chr7 (119-177)||(37157254-37157311)
chr7 (118-223)||(45218111-45218216)
chr7 (101-167)||(45890794-45890859)
chr7 (117-178)||(30463111-30463171)
chr7 (109-162)||(37496339-37496392)
chr7 (116-168)||(9602966-9603018)
chr7 (116-168)||(9830537-9830589)
chr7 (106-180)||(39498766-39498842)
chr7 (139-175)||(40038082-40038118)
[»] chr5 (43 HSPs)
chr5 (117-223)||(5147448-5147555)
chr5 (111-223)||(35988683-35988795)
chr5 (117-224)||(11099430-11099537)
chr5 (117-173)||(15564845-15564901)
chr5 (117-223)||(31196368-31196475)
chr5 (111-224)||(4475294-4475405)
chr5 (112-221)||(4576358-4576466)
chr5 (111-224)||(6629342-6629452)
chr5 (117-223)||(13016316-13016422)
chr5 (117-223)||(13087694-13087800)
chr5 (117-223)||(31090353-31090460)
chr5 (117-223)||(36469047-36469153)
chr5 (112-222)||(41594795-41594904)
chr5 (111-223)||(25111096-25111207)
chr5 (111-223)||(25170187-25170298)
chr5 (128-177)||(35012812-35012861)
chr5 (101-224)||(16283524-16283647)
chr5 (112-223)||(39060370-39060481)
chr5 (117-223)||(39060903-39061013)
chr5 (116-226)||(7613753-7613863)
chr5 (111-223)||(39212501-39212610)
chr5 (101-174)||(72057-72128)
chr5 (118-167)||(4195038-4195088)
chr5 (117-167)||(42819009-42819059)
chr5 (120-224)||(35646045-35646149)
chr5 (112-224)||(39183575-39183687)
chr5 (117-224)||(3725234-3725341)
chr5 (112-223)||(5357765-5357876)
chr5 (110-166)||(16883875-16883931)
chr5 (117-223)||(25108622-25108727)
chr5 (117-223)||(25167714-25167819)
chr5 (117-223)||(25344693-25344797)
chr5 (117-223)||(6172933-6173039)
chr5 (106-145)||(15898605-15898644)
chr5 (121-223)||(36446644-36446746)
chr5 (120-182)||(15254856-15254917)
chr5 (117-175)||(28057783-28057840)
chr5 (117-167)||(38979010-38979060)
chr5 (109-173)||(17700033-17700098)
chr5 (111-223)||(22982993-22983105)
chr5 (117-178)||(41184755-41184815)
chr5 (129-185)||(4438016-4438072)
chr5 (111-226)||(8692765-8692880)
[»] chr1 (62 HSPs)
chr1 (109-223)||(34813966-34814080)
chr1 (117-179)||(10587534-10587596)
chr1 (117-226)||(32587811-32587920)
chr1 (106-200)||(39420659-39420754)
chr1 (117-221)||(26583779-26583884)
chr1 (106-241)||(34332139-34332276)
chr1 (106-216)||(7224457-7224567)
chr1 (117-167)||(26760382-26760432)
chr1 (111-223)||(3718797-3718908)
chr1 (116-223)||(37541064-37541172)
chr1 (115-226)||(50267389-50267500)
chr1 (117-224)||(52830367-52830474)
chr1 (120-223)||(2571412-2571514)
chr1 (117-223)||(3160639-3160746)
chr1 (117-223)||(26924072-26924179)
chr1 (117-223)||(29756094-29756201)
chr1 (117-223)||(37925194-37925305)
chr1 (117-226)||(42926180-42926289)
chr1 (158-223)||(25819340-25819405)
chr1 (112-224)||(27391395-27391507)
chr1 (111-174)||(13409724-13409787)
chr1 (120-221)||(40061860-40061961)
chr1 (106-223)||(46273209-46273327)
chr1 (119-224)||(13500682-13500789)
chr1 (118-222)||(27209921-27210025)
chr1 (106-179)||(35946960-35947032)
chr1 (117-223)||(46363362-46363470)
chr1 (117-178)||(49494116-49494176)
chr1 (106-178)||(4659526-4659597)
chr1 (117-168)||(14090743-14090792)
chr1 (106-223)||(29225346-29225467)
chr1 (111-226)||(36037051-36037170)
chr1 (112-226)||(40019805-40019919)
chr1 (117-164)||(40754366-40754413)
chr1 (112-226)||(49944978-49945092)
chr1 (117-223)||(50926796-50926903)
chr1 (117-167)||(16956649-16956699)
chr1 (130-223)||(29225802-29225896)
chr1 (112-185)||(42309518-42309589)
chr1 (117-178)||(27698899-27698959)
chr1 (117-178)||(36467148-36467208)
chr1 (158-223)||(45305902-45305967)
chr1 (112-223)||(11425817-11425928)
chr1 (112-223)||(16040126-16040237)
chr1 (118-217)||(28706577-28706676)
chr1 (111-167)||(40988456-40988512)
chr1 (115-223)||(1861605-1861710)
chr1 (112-167)||(4466102-4466156)
chr1 (112-226)||(7785219-7785336)
chr1 (117-226)||(19532873-19532981)
chr1 (117-156)||(24131354-24131393)
chr1 (101-221)||(25983570-25983685)
chr1 (119-173)||(705303-705357)
chr1 (114-177)||(28908183-28908247)
chr1 (117-163)||(50773301-50773347)
chr1 (139-224)||(51749157-51749243)
chr1 (117-162)||(2886323-2886368)
chr1 (137-177)||(84335-84375)
chr1 (117-153)||(5503538-5503574)
chr1 (158-241)||(27831877-27831961)
chr1 (137-216)||(36232761-36232841)
chr1 (111-173)||(49662704-49662765)
[»] chr8 (52 HSPs)
chr8 (110-223)||(2797089-2797202)
chr8 (112-224)||(42412330-42412442)
chr8 (120-223)||(2195517-2195620)
chr8 (117-223)||(14690009-14690116)
chr8 (109-239)||(26570096-26570226)
chr8 (110-223)||(2875033-2875144)
chr8 (106-223)||(27868266-27868383)
chr8 (129-223)||(44225885-44225979)
chr8 (112-224)||(5392097-5392209)
chr8 (101-221)||(7258303-7258423)
chr8 (111-223)||(15559077-15559188)
chr8 (111-223)||(27973632-27973744)
chr8 (111-223)||(28030901-28031013)
chr8 (117-167)||(45420890-45420940)
chr8 (117-178)||(33746171-33746231)
chr8 (117-223)||(1494199-1494306)
chr8 (116-167)||(33743882-33743933)
chr8 (117-167)||(32231337-32231387)
chr8 (117-224)||(138652-138758)
chr8 (120-224)||(32241379-32241483)
chr8 (117-224)||(22324907-22325014)
chr8 (109-223)||(26677122-26677237)
chr8 (120-223)||(40077705-40077808)
chr8 (109-224)||(10728863-10728981)
chr8 (117-168)||(14748655-14748706)
chr8 (117-223)||(39998212-39998318)
chr8 (117-223)||(8394204-8394313)
chr8 (117-167)||(8566065-8566115)
chr8 (117-175)||(29615896-29615953)
chr8 (115-224)||(31410558-31410667)
chr8 (112-221)||(36649664-36649772)
chr8 (107-177)||(37703083-37703152)
chr8 (115-224)||(44790372-44790481)
chr8 (101-178)||(12957916-12957993)
chr8 (111-223)||(27875088-27875200)
chr8 (117-161)||(886399-886443)
chr8 (112-224)||(4480417-4480528)
chr8 (110-224)||(5423108-5423223)
chr8 (158-224)||(2119764-2119831)
chr8 (117-156)||(8840444-8840483)
chr8 (111-223)||(29451398-29451511)
chr8 (118-223)||(29638350-29638455)
chr8 (111-201)||(36011939-36012029)
chr8 (109-155)||(36610912-36610958)
chr8 (117-178)||(12653782-12653842)
chr8 (117-178)||(25174536-25174597)
chr8 (112-223)||(29730841-29730954)
chr8 (136-180)||(1185989-1186033)
chr8 (134-222)||(14401041-14401128)
chr8 (116-180)||(37219712-37219775)
chr8 (114-224)||(39171591-39171700)
chr8 (117-145)||(41756286-41756314)
[»] chr2 (55 HSPs)
chr2 (111-223)||(12949910-12950022)
chr2 (98-216)||(19264573-19264691)
chr2 (101-185)||(13026657-13026742)
chr2 (98-223)||(19515930-19516053)
chr2 (117-223)||(43950400-43950506)
chr2 (106-223)||(6213791-6213908)
chr2 (106-223)||(10069526-10069643)
chr2 (129-226)||(2882031-2882129)
chr2 (117-165)||(6972492-6972540)
chr2 (119-167)||(13222174-13222222)
chr2 (137-223)||(8550613-8550700)
chr2 (132-223)||(40710626-40710717)
chr2 (111-218)||(5425911-5426020)
chr2 (111-217)||(8385130-8385236)
chr2 (114-221)||(3123697-3123804)
chr2 (120-223)||(18181168-18181271)
chr2 (120-223)||(31592599-31592703)
chr2 (117-223)||(314476-314583)
chr2 (117-223)||(2048341-2048447)
chr2 (117-223)||(2756723-2756829)
chr2 (117-223)||(9724927-9725033)
chr2 (111-167)||(14384057-14384113)
chr2 (112-223)||(37529018-37529129)
chr2 (117-224)||(41436127-41436233)
chr2 (117-156)||(928490-928529)
chr2 (109-184)||(6075565-6075640)
chr2 (142-221)||(25604412-25604490)
chr2 (100-223)||(29937849-29937972)
chr2 (117-178)||(435028-435090)
chr2 (111-173)||(733957-734019)
chr2 (117-226)||(23685005-23685114)
chr2 (141-223)||(44424240-44424321)
chr2 (117-178)||(13375140-13375200)
chr2 (117-178)||(28108327-28108387)
chr2 (117-178)||(40965109-40965169)
chr2 (111-156)||(44024824-44024869)
chr2 (137-224)||(565137-565225)
chr2 (109-173)||(19009951-19010015)
chr2 (106-240)||(20027090-20027225)
chr2 (115-226)||(43077676-43077787)
chr2 (118-217)||(43182327-43182426)
chr2 (162-224)||(4794621-4794684)
chr2 (112-182)||(10394232-10394299)
chr2 (112-175)||(45464162-45464224)
chr2 (137-226)||(24775779-24775869)
chr2 (112-177)||(32556268-32556330)
chr2 (106-156)||(38872862-38872912)
chr2 (112-178)||(44736961-44737026)
chr2 (156-221)||(9937070-9937135)
chr2 (117-178)||(28925800-28925860)
chr2 (119-167)||(3200001-3200049)
chr2 (139-226)||(28301480-28301568)
chr2 (122-178)||(36155608-36155664)
chr2 (111-178)||(39159714-39159779)
chr2 (111-178)||(39209415-39209480)
[»] chr4 (55 HSPs)
chr4 (119-220)||(4485918-4486019)
chr4 (115-226)||(35909523-35909634)
chr4 (101-223)||(35027433-35027555)
chr4 (112-224)||(4360355-4360467)
chr4 (111-221)||(18872600-18872708)
chr4 (117-223)||(20964239-20964346)
chr4 (112-224)||(22872333-22872447)
chr4 (111-179)||(1920823-1920890)
chr4 (98-185)||(3502990-3503078)
chr4 (111-223)||(13529911-13530023)
chr4 (111-179)||(10309199-10309269)
chr4 (101-216)||(29990406-29990523)
chr4 (101-164)||(46958828-46958891)
chr4 (117-167)||(28330900-28330950)
chr4 (117-167)||(42132921-42132971)
chr4 (117-167)||(49218734-49218784)
chr4 (110-223)||(52676976-52677089)
chr4 (116-185)||(43125887-43125956)
chr4 (111-223)||(47277627-47277740)
chr4 (112-223)||(49448890-49448999)
chr4 (111-179)||(5499378-5499446)
chr4 (106-212)||(38838681-38838791)
chr4 (120-223)||(41436530-41436633)
chr4 (98-184)||(3511925-3512012)
chr4 (107-216)||(25104200-25104310)
chr4 (119-224)||(54729434-54729543)
chr4 (106-167)||(12619793-12619853)
chr4 (112-224)||(17237091-17237203)
chr4 (119-223)||(38319960-38320065)
chr4 (117-166)||(54217478-54217527)
chr4 (117-224)||(43334975-43335082)
chr4 (112-222)||(28974356-28974466)
chr4 (110-223)||(53848695-53848809)
chr4 (109-201)||(9778878-9778970)
chr4 (112-226)||(21240939-21241054)
chr4 (112-223)||(34021086-34021197)
chr4 (112-180)||(38534943-38535010)
chr4 (111-167)||(41594793-41594849)
chr4 (152-223)||(44633205-44633277)
chr4 (98-152)||(7117249-7117304)
chr4 (117-156)||(25902413-25902452)
chr4 (112-221)||(40020892-40021004)
chr4 (117-223)||(48400583-48400689)
chr4 (117-167)||(37315873-37315923)
chr4 (137-226)||(38160123-38160213)
chr4 (112-177)||(8295125-8295189)
chr4 (117-154)||(36046002-36046039)
chr4 (109-217)||(40202656-40202761)
chr4 (144-185)||(53101869-53101910)
chr4 (101-173)||(9051913-9051984)
chr4 (112-140)||(14452065-14452093)
chr4 (119-226)||(18849713-18849820)
chr4 (117-165)||(22020463-22020511)
chr4 (111-167)||(32324366-32324422)
chr4 (116-215)||(34790902-34791001)
[»] chr3 (43 HSPs)
chr3 (120-223)||(9218194-9218297)
chr3 (117-226)||(9017847-9017956)
chr3 (109-223)||(39329694-39329808)
chr3 (117-226)||(39866505-39866614)
chr3 (98-223)||(44218967-44219091)
chr3 (136-223)||(38524263-38524350)
chr3 (116-226)||(54122175-54122285)
chr3 (112-224)||(10855042-10855154)
chr3 (120-221)||(42547061-42547162)
chr3 (153-221)||(31650962-31651030)
chr3 (111-178)||(24618873-24618940)
chr3 (112-224)||(2868622-2868734)
chr3 (107-156)||(45267165-45267214)
chr3 (119-223)||(51165001-51165105)
chr3 (106-223)||(53583501-53583618)
chr3 (115-226)||(32827254-32827365)
chr3 (117-224)||(33994705-33994812)
chr3 (111-162)||(39144770-39144822)
chr3 (119-167)||(46194160-46194208)
chr3 (117-167)||(1923193-1923241)
chr3 (116-226)||(11251078-11251188)
chr3 (112-179)||(22756182-22756248)
chr3 (112-214)||(51636843-51636945)
chr3 (111-224)||(30261449-30261560)
chr3 (98-156)||(47684857-47684915)
chr3 (139-223)||(21296476-21296561)
chr3 (112-223)||(14756061-14756172)
chr3 (119-175)||(22202321-22202376)
chr3 (133-223)||(41287311-41287402)
chr3 (120-226)||(43639471-43639577)
chr3 (112-166)||(11529023-11529076)
chr3 (117-167)||(36790772-36790822)
chr3 (116-224)||(54458259-54458368)
chr3 (101-142)||(8769353-8769394)
chr3 (112-224)||(17776941-17777053)
chr3 (112-224)||(19078242-19078354)
chr3 (189-226)||(27668351-27668388)
chr3 (117-178)||(54783058-54783118)
chr3 (115-151)||(26479818-26479854)
chr3 (110-216)||(36315679-36315784)
chr3 (106-179)||(40614071-40614139)
chr3 (112-180)||(49408602-49408669)
chr3 (136-223)||(53754034-53754122)
[»] chr6 (24 HSPs)
chr6 (115-223)||(15371813-15371921)
chr6 (113-226)||(8569589-8569698)
chr6 (111-223)||(16126260-16126373)
chr6 (115-223)||(15355624-15355732)
chr6 (117-220)||(15351335-15351438)
chr6 (131-216)||(20027638-20027724)
chr6 (136-223)||(3874020-3874108)
chr6 (119-223)||(15321179-15321283)
chr6 (117-165)||(15325254-15325302)
chr6 (111-167)||(31075870-31075926)
chr6 (110-217)||(20383900-20384007)
chr6 (110-224)||(31265827-31265941)
chr6 (116-226)||(4238467-4238575)
chr6 (112-223)||(33921416-33921527)
chr6 (112-224)||(34915758-34915872)
chr6 (117-167)||(4553006-4553057)
chr6 (119-224)||(7301036-7301139)
chr6 (137-239)||(14312619-14312722)
chr6 (106-156)||(7167869-7167919)
chr6 (137-175)||(31133312-31133350)
chr6 (130-184)||(33413712-33413766)
chr6 (117-167)||(34803656-34803706)
chr6 (117-178)||(15081518-15081578)
chr6 (136-223)||(3166078-3166166)
[»] scaffold0576 (1 HSPs)
scaffold0576 (115-223)||(614-722)
[»] scaffold0034 (1 HSPs)
scaffold0034 (112-178)||(98920-98985)
[»] scaffold0227 (1 HSPs)
scaffold0227 (117-182)||(8957-9021)
[»] scaffold0491 (1 HSPs)
scaffold0491 (105-209)||(11757-11865)
[»] scaffold0262 (1 HSPs)
scaffold0262 (117-223)||(12387-12494)
[»] scaffold0155 (1 HSPs)
scaffold0155 (117-178)||(7873-7932)
[»] scaffold0221 (1 HSPs)
scaffold0221 (117-223)||(10741-10849)
[»] scaffold0003 (1 HSPs)
scaffold0003 (117-223)||(352415-352519)
[»] scaffold0006 (1 HSPs)
scaffold0006 (111-224)||(229871-229983)


Alignment Details
Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 10 - 241
Target Start/End: Complemental strand, 6697343 - 6697112
Alignment:
Q  10 gactaagcatgacttcatacttatttcattcatattattcactcttatttcttagaaaaataaagaaaaataagactttctcatccagtaataacggagt 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6697343 gactaagcatgacttcatacttatttcattcatattattcactcttatttcttagaaaaataaagaaaaataagactttctcatccagtaataacggagt 6697244  T
Q  110 tttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattat 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6697243 tttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattat 6697144  T
Q  210 cataaatgcaaagtgaagggtgttgaattggg 241  Q
    ||||||||||||||||||||||||||||||||    
T  6697143 cataaatgcaaagtgaagggtgttgaattggg 6697112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 114 - 215
Target Start/End: Complemental strand, 8150117 - 8150016
Alignment:
Q  114 tgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattatcata 213  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||   |||| ||||||||| ||||||||||    
T  8150117 tgttcatttcacacatattaagaaaaaatgtataagtgaaagagagagaaaaatggttttaagtgttttgtcaaatatttgtgcattttccattatcata 8150018  T
Q  214 aa 215  Q
    ||    
T  8150017 aa 8150016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 110 - 220
Target Start/End: Original strand, 14648861 - 14648974
Alignment:
Q  110 tttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataatttta---agtgttttgtcgtgtattggtgcatttttcat 206  Q
    |||||| ||||||| ||| |||   ||||||||||||||||||||||||||||||||| ||||||   ||||| |||||   ||||||||||||| ||||    
T  14648861 tttttgctcatttcgcacatatattgaaaaaatgtataagtgaaagaaagagaaaaatgattttaattagtgtcttgtcaattattggtgcatttctcat 14648960  T
Q  207 tatcataaatgcaa 220  Q
    ||||||||||||||    
T  14648961 tatcataaatgcaa 14648974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 32346684 - 32346567
Alignment:
Q  106 gagttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttca 205  Q
    |||| ||||||||||||||||| |||||||||||| |  |||||||||||| ||||| | ||| |||| ||||  ||||| | ||| ||||||||| ||     
T  32346684 gagtattttgttcatttcacacatattaagaaaaagtaaataagtgaaagacagagagagatagttttgagtgacttgtcatttatcggtgcatttctcc 32346585  T
Q  206 ttatcataaatgcaaagt 223  Q
    ||||||||||||||||||    
T  32346584 ttatcataaatgcaaagt 32346567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 223
Target Start/End: Original strand, 3667832 - 3667935
Alignment:
Q  120 tttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattatcataaatgca 219  Q
    |||||||| |||||||||| | ||||||||||||| |||||||||||||||||| ||||| || ||  ||||| ||||||| ||  |||||||||||| |    
T  3667832 tttcacacatattaagaaatagtgtataagtgaaaaaaagagaaaaataattttgagtgtcttatcaagtattagtgcattatttcttatcataaatgta 3667931  T
Q  220 aagt 223  Q
    ||||    
T  3667932 aagt 3667935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 118 - 223
Target Start/End: Complemental strand, 2849409 - 2849304
Alignment:
Q  118 catttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatcataaat 216  Q
    |||||||||| |||||||||||| ||||||| ||||||| ||||||||||| ||||  |||| ||||||  ||||||||||||| ||| |||||||||||    
T  2849409 catttcacacatattaagaaaaa-tgtataaatgaaagagagagaaaaatagttttgcgtgtctttgtcaagtattggtgcattcttctttatcataaat 2849311  T
Q  217 gcaaagt 223  Q
    | |||||    
T  2849310 gtaaagt 2849304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 117 - 167
Target Start/End: Original strand, 32971969 - 32972019
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaat 167  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  32971969 tcatttcacacttattaagaaaaaatgtataagtgaaagagagagaaaaat 32972019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 118 - 226
Target Start/End: Complemental strand, 23058972 - 23058865
Alignment:
Q  118 catttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtt-ttgtcgtgtattggtgcatttttcattatcataaat 216  Q
    |||||||||| |||||||||||| | ||||| ||||||| ||||||||||| ||||||||||| ||||   ||||||||||||| | || ||||||||||    
T  23058972 catttcacacgtattaagaaaaa-tatataaatgaaagagagagaaaaatagttttaagtgttcttgt-tagtattggtgcattctccactatcataaat 23058875  T
Q  217 gcaaagtgaa 226  Q
    ||||||||||    
T  23058874 gcaaagtgaa 23058865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 223
Target Start/End: Complemental strand, 32776145 - 32776032
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattat 209  Q
    ||||| ||||||||||| |||||||||||| |||||||||||| || ||||||||||  |||| ||||  |||||   ||||||||||||| ||| ||||    
T  32776145 ttttgctcatttcacacatattaagaaaaagtgtataagtgaaggagagagaaaaatggttttgagtgcctttgttaagtattggtgcattcttctttat 32776046  T
Q  210 cataaatgcaaagt 223  Q
    |||||||| |||||    
T  32776045 cataaatgtaaagt 32776032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 109 - 216
Target Start/End: Complemental strand, 43008059 - 43007950
Alignment:
Q  109 ttttttgttcatttcacacttattaagaaaaaat-gtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcat 206  Q
    ||||||| ||||||||||| | |||||||||||  |||||||||||||| || |||||||| |||| ||||| ||||||  ||||| ||||||||||| |    
T  43008059 ttttttgctcatttcacacatgttaagaaaaaaacgtataagtgaaagagagggaaaaatagttttgagtgtctttgtcaagtatttgtgcatttttctt 43007960  T
Q  207 tatcataaat 216  Q
    ||||||||||    
T  43007959 tatcataaat 43007950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 223
Target Start/End: Complemental strand, 9658999 - 9658887
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattatc 210  Q
    |||| |||||||||||| ||||||||||||||||| ||| |||||| ||||||||||  |||| ||||| ||||    |||||||||||||| | ||||     
T  9658999 ttttattcatttcacacatattaagaaaaaatgtacaagcgaaagagagagaaaaatggttttgagtgtcttgtgaactattggtgcattttcccttatg 9658900  T
Q  211 ataaatgcaaagt 223  Q
    ||||||| |||||    
T  9658899 ataaatgtaaagt 9658887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 224
Target Start/End: Original strand, 33773994 - 33774102
Alignment:
Q  116 ttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    |||||||||||  |||||||||||| ||||||||||||||| ||||||||||| |||| ||||| ||||   |||||| || ||| | || ||||||| |    
T  33773994 ttcatttcacatatattaagaaaaagtgtataagtgaaagagagagaaaaatagttttgagtgtcttgttaagtattgatgtattctccactatcataga 33774093  T
Q  216 tgcaaagtg 224  Q
    |||||||||    
T  33774094 tgcaaagtg 33774102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 115 - 226
Target Start/End: Original strand, 5724658 - 5724768
Alignment:
Q  115 gttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattatcataa 214  Q
    ||||||||||||| ||||||||||| |||||||| |||| || ||||||||||| |||||||||  ||||   ||||| ||||||| | || ||||||||    
T  5724658 gttcatttcacacgtattaagaaaa-atgtataaatgaaggagagagaaaaatagttttaagtgccttgttaagtattagtgcattctccactatcataa 5724756  T
Q  215 atgcaaagtgaa 226  Q
    ||| ||||||||    
T  5724757 atgtaaagtgaa 5724768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 23111040 - 23111147
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    |||||||| ||||||||||||||||||||||| ||||| | |||||||||| ||||| | ||| ||| ||   |||||||||||| ||| ||||||||||    
T  23111040 tcatttcatacttattaagaaaaaatgtataaatgaaatagagagaaaaatgattttgaatgtctttatcaactattggtgcattcttctttatcataaa 23111139  T
Q  216 tgcaaagt 223  Q
    || |||||    
T  23111140 tgtaaagt 23111147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 29996980 - 29997087
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    |||||||||||||||||||||||| ||||||||||||||| | ||||||||  |||| | |||  ||||    |||||||||||| ||| ||||||||||    
T  29996980 tcatttcacacttattaagaaaaagtgtataagtgaaagagaaagaaaaatggttttgaatgtccttgttaattattggtgcattcttctttatcataaa 29997079  T
Q  216 tgcaaagt 223  Q
    ||||||||    
T  29997080 tgcaaagt 29997087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 47238373 - 47238266
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||  |||| ||||   || ||    ||||||||||| ||| ||||||||||    
T  47238373 tcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatggttttgagtgcccttatcaacaattggtgcattcttctttatcataaa 47238274  T
Q  216 tgcaaagt 223  Q
    ||||||||    
T  47238273 tgcaaagt 47238266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 179
Target Start/End: Complemental strand, 21446592 - 21446530
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt 179  Q
    |||||| | ||||||||||||||| ||||||||||||||| |||||||||||||||| |||||    
T  21446592 tcattttatacttattaagaaaaattgtataagtgaaagagagagaaaaataattttgagtgt 21446530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 116 - 224
Target Start/End: Original strand, 37490569 - 37490677
Alignment:
Q  116 ttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgt-gtattggtgcatttttcattatcataa 214  Q
    |||||||||||| | |||||||||| ||||||| |||| || |||||||||| |||||||||||||| |    ||||||||||||| | || ||||||||    
T  37490569 ttcatttcacacatgttaagaaaaa-tgtataaatgaaggagagagaaaaatgattttaagtgttttttttaagtattggtgcattctccactatcataa 37490667  T
Q  215 atgcaaagtg 224  Q
    ||||||||||    
T  37490668 atgcaaagtg 37490677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 111 - 223
Target Start/End: Complemental strand, 34064376 - 34064264
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattatc 210  Q
    |||| ||| |||||||| |||||| ||||| ||||||| ||||| | ||||||||||| |||| ||||| ||||   ||||||||||||| ||  |||||    
T  34064376 tttttttcttttcacacatattaaaaaaaagtgtataaatgaaatagagagaaaaatagttttgagtgtcttgttaagtattggtgcattctttcttatc 34064277  T
Q  211 ataaatgcaaagt 223  Q
    ||||||| |||||    
T  34064276 ataaatgtaaagt 34064264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 174
Target Start/End: Complemental strand, 17494508 - 17494445
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataatttta 174  Q
    |||| |||||||||||| |||||||||||||||||||||| ||||||||| |||| || |||||    
T  17494508 ttttattcatttcacacatattaagaaaaaatgtataagtaaaagaaagaaaaaattattttta 17494445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 174
Target Start/End: Original strand, 17558706 - 17558769
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataatttta 174  Q
    |||| |||||||||||| |||||||||||||||||||||| ||||||||| |||| || |||||    
T  17558706 ttttattcatttcacacatattaagaaaaaatgtataagtaaaagaaagaaaaaattattttta 17558769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 223
Target Start/End: Original strand, 40023672 - 40023785
Alignment:
Q  110 tttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattat 209  Q
    |||||||| ||||||||  |||||||||||||| ||||| ||||| | ||||||||||  |||| ||||| |||||   |||| | |||||| || |||     
T  40023672 tttttgttaatttcacatgtattaagaaaaaatatataattgaaaaagagagaaaaattgttttgagtgtcttgtcaaatattagagcatttctccttac 40023771  T
Q  210 cataaatgcaaagt 223  Q
    ||||||||||||||    
T  40023772 cataaatgcaaagt 40023785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 22617981 - 22618050
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtttt 182  Q
    ||||| |||||| |||| ||||||  ||||||||||||||||||||||||| |||||  |||||||||||||    
T  22617981 ttttgatcatttgacacatattaa--aaaaatgtataagtgaaagaaagaggaaaatcgttttaagtgtttt 22618050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 226
Target Start/End: Original strand, 2842023 - 2842113
Alignment:
Q  137 aaaaatgtataagtgaaagaaagagaaaaataattttaagtgtt-ttgtcgtgtattggtgcatttttcattatcataaatgcaaagtgaa 226  Q
    |||||||||||| |||| || ||||||||||  | ||||||||| |||||  |||||| |||||| | || ||||||||||||||||||||    
T  2842023 aaaaatgtataaatgaaggagagagaaaaatggtgttaagtgttattgtcaagtattgatgcattctccactatcataaatgcaaagtgaa 2842113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 224
Target Start/End: Original strand, 7425828 - 7425937
Alignment:
Q  116 ttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtt-ttg-tcgtgtattggtgcatttttcattatcata 213  Q
    |||||||||||| |||||||| ||| ||||||| |||| || ||||||||||  ||||||||||| ||| |   ||||||||||||| | || |||||||    
T  7425828 ttcatttcacacgtattaagacaaa-tgtataaatgaatgagagagaaaaatggttttaagtgttcttgtttaagtattggtgcattctccactatcata 7425926  T
Q  214 aatgcaaagtg 224  Q
    |||||||||||    
T  7425927 aatgcaaagtg 7425937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 224
Target Start/End: Complemental strand, 11616721 - 11616610
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatc 210  Q
    |||| ||||||||||| ||||||  |||||||||||| |||| || ||||||||||  ||||||||| | ||||   ||||||||||||| | || ||||    
T  11616721 tttgctcatttcacacatattaa--aaaaatgtataaatgaaggagagagaaaaatggttttaagtgctcttgttaagtattggtgcattctccactatc 11616624  T
Q  211 ataaatgcaaagtg 224  Q
    ||| ||||||||||    
T  11616623 atatatgcaaagtg 11616610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 221
Target Start/End: Complemental strand, 27234662 - 27234554
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatc 210  Q
    |||||||||||||||| |||||||| ||||||||||| |||| || |||| |||||  ||||||||| ||||||   |||||| |||||| | || ||||    
T  27234662 tttgttcatttcacacatattaaga-aaaatgtataaatgaatgacagag-aaaattgttttaagtgtttttgttaagtattgatgcattctccactatc 27234565  T
Q  211 ataaatgcaaa 221  Q
    |||||||||||    
T  27234564 ataaatgcaaa 27234554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 223
Target Start/End: Complemental strand, 37264473 - 37264362
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattat 209  Q
    ||||| ||||||||||| |||||||||||| | ||||||||||||  ||||||||||  |||| ||||   |||||  |||||| ||||||  || ||||    
T  37264473 ttttgctcatttcacacatattaagaaaaagtatataagtgaaag--agagaaaaatggttttgagtgcccttgtcaagtattgatgcattgctctttat 37264376  T
Q  210 cataaatgcaaagt 223  Q
    ||||||||||||||    
T  37264375 cataaatgcaaagt 37264362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 3105165 - 3105101
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaa 175  Q
    ||||||||| ||| ||  |||||| | ||||||||||||||||| |||||||||||| |||||||    
T  3105165 ttttgttcagttctcatatattaaaagaaaatgtataagtgaaaaaaagagaaaaatgattttaa 3105101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 173
Target Start/End: Complemental strand, 27621993 - 27621937
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataatttt 173  Q
    ||||||||||||||||||||||||||||||||   ||||| | |||||||| |||||    
T  27621993 tcatttcacacttattaagaaaaaatgtataatgaaaagagaaagaaaaatgatttt 27621937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 224
Target Start/End: Original strand, 1643330 - 1643397
Alignment:
Q  158 agagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcataaatgcaaagtg 224  Q
    ||||||||||||||| ||||| |||| |   ||||||||||||| ||||| |||||||||||||||||    
T  1643330 agagaaaaataatttaaagtgcttttattaagtattggtgcattcttcataatcataaatgcaaagtg 1643397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 168
Target Start/End: Original strand, 49100455 - 49100505
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaata 168  Q
    ||||||||||| ||||||||||| |||||||| ||||||| |||||||||||    
T  49100455 tcatttcacacgtattaagaaaa-atgtataaatgaaagacagagaaaaata 49100505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 226
Target Start/End: Complemental strand, 17266111 - 17266073
Alignment:
Q  188 gtattggtgcatttttcattatcataaatgcaaagtgaa 226  Q
    ||||||||||||| |||| ||||||||||||||||||||    
T  17266111 gtattggtgcattcttcactatcataaatgcaaagtgaa 17266073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 223
Target Start/End: Original strand, 29645179 - 29645292
Alignment:
Q  110 tttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtt-ttgtcgtgtattggtgcatttttcatta 208  Q
    |||||||| |||||| | ||||||||||||| |  ||  ||||| || |||||||| |||||||||||||| ||||   |||||||||||||| |||| |    
T  29645179 tttttgtttatttcataattattaagaaaaatttaatg-gtgaaggagagagaaaattaattttaagtgttcttgttaagtattggtgcatttgtcataa 29645277  T
Q  209 tcataaatgcaaagt 223  Q
     |||||| |||||||    
T  29645278 acataaacgcaaagt 29645292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 177
Target Start/End: Complemental strand, 37157311 - 37157254
Alignment:
Q  119 atttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagt 177  Q
    ||||||||| |||||||||||| ||||||  |||| || ||||||||||||||||||||    
T  37157311 atttcacacgtattaagaaaaa-tgtatagatgaaggagagagaaaaataattttaagt 37157254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 223
Target Start/End: Original strand, 45218111 - 45218216
Alignment:
Q  118 catttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatcataaat 216  Q
    ||||||||||  ||||||||||  |||||||  |||||| ||||||||||| |||| ||||  ||| ||  ||||||||||||| ||| |||||||||||    
T  45218111 catttcacacaaattaagaaaag-tgtataaaggaaagagagagaaaaatagttttgagtgcctttttcaagtattggtgcattcttctttatcataaat 45218209  T
Q  217 gcaaagt 223  Q
    | |||||    
T  45218210 gtaaagt 45218216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 167
Target Start/End: Original strand, 45890794 - 45890859
Alignment:
Q  101 taacggagttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaat 167  Q
    |||| ||||| |||||||||||||||| ||||||| ||||||||||||  ||| || ||||||||||    
T  45890794 taactgagttatttgttcatttcacacgtattaag-aaaaatgtataaaagaaggagagagaaaaat 45890859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 30463171 - 30463111
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg 178  Q
    ||||||||| | |||||||||||| ||||||| |||| || ||||||||||| |||||||||    
T  30463171 tcatttcacgcgtattaagaaaaa-tgtataaatgaatgagagagaaaaatagttttaagtg 30463111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 162
Target Start/End: Original strand, 37496339 - 37496392
Alignment:
Q  109 ttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagaga 162  Q
    |||||| ||| ||| |||| |||||||||||| ||||||||||||||| |||||    
T  37496339 tttttttttctttttacacatattaagaaaaagtgtataagtgaaagagagaga 37496392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 9603018 - 9602966
Alignment:
Q  116 ttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaata 168  Q
    ||||||||||||||||||| ||||| || ||||||| |||| ||| |||||||    
T  9603018 ttcatttcacacttattaaaaaaaagtgcataagtggaagagagaaaaaaata 9602966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 9830589 - 9830537
Alignment:
Q  116 ttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaata 168  Q
    ||||||||||||||||||| ||||| || ||||||| |||| ||| |||||||    
T  9830589 ttcatttcacacttattaaaaaaaagtgcataagtggaagagagaaaaaaata 9830537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 180
Target Start/End: Complemental strand, 39498842 - 39498766
Alignment:
Q  106 gagttttttgttcatttcacacttattaagaaaaa-at-gtataagtgaaagaaagagaaaaataattttaagtgtt 180  Q
    |||| ||||| |||||||||||||||||| ||||| || |||| |||||| || ||||||||||| |||||| ||||    
T  39498842 gagtcttttgctcatttcacacttattaaaaaaaatatagtattagtgaatgagagagaaaaatagttttaaatgtt 39498766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 175
Target Start/End: Original strand, 40038082 - 40038118
Alignment:
Q  139 aaatgtataagtgaaagaaagagaaaaataattttaa 175  Q
    |||||||||| |||| |||||||||||||||||||||    
T  40038082 aaatgtataaatgaaggaaagagaaaaataattttaa 40038118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 5147448 - 5147555
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||  || ||   |||||||||||| ||| ||||||||||    
T  5147448 tcatttcacacttattaagaaaaaatatataagtgaaagaaagagaaaaatgattttgagtgtccttatcaactattggtgcattcttctttatcataaa 5147547  T
Q  216 tgcaaagt 223  Q
    ||||||||    
T  5147548 tgcaaagt 5147555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 111 - 223
Target Start/End: Complemental strand, 35988795 - 35988683
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattatc 210  Q
    |||| |||||||||||  |||||||||||||| ||||||||||| | ||||||||||| |||||||||| |||||  |||||||||||||  |  |||||    
T  35988795 tttttttcatttcacatatattaagaaaaaatttataagtgaaacagagagaaaaatagttttaagtgtgttgtcaagtattggtgcattcattcttatc 35988696  T
Q  211 ataaatgcaaagt 223  Q
    |||||||||||||    
T  35988695 ataaatgcaaagt 35988683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 117 - 224
Target Start/End: Original strand, 11099430 - 11099537
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    ||||||||||| ||||||||||| |||||||| ||||||| ||||||||||| ||||||||| ||||||   ||||||||||||| | || |||||||||    
T  11099430 tcatttcacacatattaagaaaa-atgtataaatgaaagagagagaaaaatagttttaagtgtttttgttaagtattggtgcattctccactatcataaa 11099528  T
Q  216 tgcaaagtg 224  Q
    | |||||||    
T  11099529 tacaaagtg 11099537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 117 - 173
Target Start/End: Original strand, 15564845 - 15564901
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataatttt 173  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  15564845 tcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaataatttt 15564901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 31196475 - 31196368
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    ||||||||||||||||||||||| |||||||| ||||||| | ||||||||| |||| |||||  ||||| | ||||| |||||||||| |||| ||| |    
T  31196475 tcatttcacacttattaagaaaatatgtataaatgaaagagatagaaaaatagttttgagtgtccttgtcatttattgctgcatttttctttattataca 31196376  T
Q  216 tgcaaagt 223  Q
    ||||||||    
T  31196375 tgcaaagt 31196368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 111 - 224
Target Start/End: Complemental strand, 4475405 - 4475294
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattat 209  Q
    ||||||||||| ||||| |||||||||||  ||||||||||||||||||||||||||  | || |||||  |||||  |||||||||||||   ||||||    
T  4475405 ttttgttcattgcacacatattaagaaaag-tgtataagtgaaagaaagagaaaaat--tgttgagtgtccttgtcaagtattggtgcattcaccattat 4475309  T
Q  210 cataaatgcaaagtg 224  Q
    |||||||||||||||    
T  4475308 cataaatgcaaagtg 4475294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 221
Target Start/End: Original strand, 4576358 - 4576466
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtt-ttgtcgtgtattggtgcatttttcattatc 210  Q
    |||| ||||||||||| |||||||||||| ||||||| ||||| ||||||||||| | ||||||||||| |||||  ||||||||||||    |||||||    
T  4576358 tttgctcatttcacacatattaagaaaaa-tgtataaatgaaaaaaagagaaaaacagttttaagtgttcttgtcaagtattggtgcatcac-cattatc 4576455  T
Q  211 ataaatgcaaa 221  Q
    |||||||||||    
T  4576456 ataaatgcaaa 4576466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 224
Target Start/End: Original strand, 6629342 - 6629452
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattatc 210  Q
    |||| ||| |||||||| |||||||||||| ||||||| ||||||| ||   |||||| |||| ||||| |||||  ||||||||||||| ||  ||||     
T  6629342 tttttttcttttcacacatattaagaaaaagtgtataaatgaaagagag---aaaatagttttgagtgtcttgtcaagtattggtgcattcttttttatt 6629438  T
Q  211 ataaatgcaaagtg 224  Q
    ||||||||||||||    
T  6629439 ataaatgcaaagtg 6629452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 13016316 - 13016422
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||||||| | ||| |||||  || ||   |||||||||| || || ||||||||||    
T  13016316 tcatttcacacttattaagaaaaagtgtaaaagtgaaagagagagaaaaatgagtttgagtgtccttatcaactattggtgca-ttctctttatcataaa 13016414  T
Q  216 tgcaaagt 223  Q
    ||||||||    
T  13016415 tgcaaagt 13016422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 13087694 - 13087800
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||||||| | ||| |||||  || ||   |||||||||| || || ||||||||||    
T  13087694 tcatttcacacttattaagaaaaagtgtaaaagtgaaagagagagaaaaatgagtttgagtgtccttatcaactattggtgca-ttctctttatcataaa 13087792  T
Q  216 tgcaaagt 223  Q
    ||||||||    
T  13087793 tgcaaagt 13087800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 31090460 - 31090353
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    |||||| ||| ||||||||||||||||||||||||||| | |||||||||| ||||| ||||   || ||   |||||||||||| ||| ||||||||||    
T  31090460 tcattttacatttattaagaaaaaatgtataagtgaaaaagagagaaaaatgattttgagtgcccttatcaactattggtgcattcttctttatcataaa 31090361  T
Q  216 tgcaaagt 223  Q
     |||||||    
T  31090360 cgcaaagt 31090353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 36469047 - 36469153
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtttt-gtcgtgtattggtgcatttttcattatcataaa 215  Q
    ||||||||||| |||||||||||| ||||||| |||| || | | |||||| ||| |||||||||| ||  |||||||||||||| | || |||||||||    
T  36469047 tcatttcacacatattaagaaaaa-tgtataaatgaaggagataaaaaaatgattataagtgtttttgttatgtattggtgcattctccactatcataaa 36469145  T
Q  216 tgcaaagt 223  Q
    ||||||||    
T  36469146 tgcaaagt 36469153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 222
Target Start/End: Original strand, 41594795 - 41594904
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatc 210  Q
    |||| |||||||| || |||||||||||| | |||||||||| || |||||||||||||||||| || |||||||  |||||||| ||||   |||||||    
T  41594795 tttgctcatttcatacatattaagaaaaa-tatataagtgaatgagagagaaaaataattttaaatgtttttgtcaagtattggt-cattcaccattatc 41594892  T
Q  211 ataaatgcaaag 222  Q
    ||||||||||||    
T  41594893 ataaatgcaaag 41594904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 223
Target Start/End: Original strand, 25111096 - 25111207
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattat 209  Q
    ||||| ||||||||||| |||||||||||   ||| |||||||||  ||||||||||| |||| ||||| ||||||  |||||| |||||| ||| ||||    
T  25111096 ttttgctcatttcacacatattaagaaaaggagtaaaagtgaaag--agagaaaaatagttttgagtgtctttgtcaagtattgctgcattcttctttat 25111193  T
Q  210 cataaatgcaaagt 223  Q
    |||||||| |||||    
T  25111194 cataaatgtaaagt 25111207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 223
Target Start/End: Original strand, 25170187 - 25170298
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattat 209  Q
    ||||| ||||||||||| |||||||||||   ||| |||||||||  ||||||||||| |||| ||||| ||||||  |||||| |||||| ||| ||||    
T  25170187 ttttgctcatttcacacatattaagaaaaggagtaaaagtgaaag--agagaaaaatagttttgagtgtctttgtcaagtattgctgcattcttctttat 25170284  T
Q  210 cataaatgcaaagt 223  Q
    |||||||| |||||    
T  25170285 cataaatgtaaagt 25170298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 177
Target Start/End: Original strand, 35012812 - 35012861
Alignment:
Q  128 ttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagt 177  Q
    ||||||||||||| ||||||||||||||| | ||||||||||||||||||    
T  35012812 ttattaagaaaaagtgtataagtgaaagagaaagaaaaataattttaagt 35012861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 101 - 224
Target Start/End: Original strand, 16283524 - 16283647
Alignment:
Q  101 taacggagttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcat 199  Q
    |||| ||||| |||| ||||||||||  |||||| ||||||||||||| |||| || ||| ||||||  |||||| || ||||||  |||||||||||||    
T  16283524 taactgagttatttgatcatttcacatgtattaa-aaaaaatgtataaatgaaggagagaaaaaaatggttttaaatgattttgttatgtattggtgcat 16283622  T
Q  200 ttttcattatcataaatgcaaagtg 224  Q
    | |  | ||||||||||||||||||    
T  16283623 tctcaactatcataaatgcaaagtg 16283647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 39060370 - 39060481
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatc 210  Q
    |||| ||||||||||||||||||| |||||| ||| |||||| || ||||||||||  |||| ||||  |||||   |||||||| |||| ||| |||||    
T  39060370 tttgctcatttcacacttattaag-aaaaatatattagtgaaggagagagaaaaatggttttgagtgcatttgttaagtattggtccattcttctttatc 39060468  T
Q  211 ataaatgcaaagt 223  Q
    |||||||||||||    
T  39060469 ataaatgcaaagt 39060481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 39060903 - 39061013
Alignment:
Q  117 tcatttcacacttattaagaaaaaat---gtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatcat 212  Q
    ||||||||||||||||||||||||||   |||||||||||||| |||||||||| | ||| |||||  |||||    | | ||||||| ||| |||||||    
T  39060903 tcatttcacacttattaagaaaaaatgtagtataagtgaaagagagagaaaaatgagtttgagtgtccttgtcaaccactagtgcattcttctttatcat 39061002  T
Q  213 aaatgcaaagt 223  Q
    |||||||||||    
T  39061003 aaatgcaaagt 39061013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 226
Target Start/End: Complemental strand, 7613863 - 7613753
Alignment:
Q  116 ttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcataa 214  Q
    ||||||| |||| |||||||||||| ||||||| | || |||||||||||||| |||||||||   ||||   ||||||||||||| | || ||||||||    
T  7613863 ttcatttaacacatattaagaaaaa-tgtataaattaaggaaagagaaaaatagttttaagtgcacttgttaagtattggtgcattctccactatcataa 7613765  T
Q  215 atgcaaagtgaa 226  Q
    ||| ||||||||    
T  7613764 atgtaaagtgaa 7613753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 223
Target Start/End: Original strand, 39212501 - 39212610
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatt-tttcattat 209  Q
    ||||||||||||||| | |||||||||||| ||||||||||||||  ||||||||||  | || ||||  |||||  |||||||||||||    ||||||    
T  39212501 ttttgttcatttcacgcatattaagaaaaattgtataagtgaaag--agagaaaaat--tgttgagtgccttgtcaagtattggtgcattcccccattat 39212596  T
Q  210 cataaatgcaaagt 223  Q
    ||||||||||||||    
T  39212597 cataaatgcaaagt 39212610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 174
Target Start/End: Original strand, 72057 - 72128
Alignment:
Q  101 taacggagttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataatttta 174  Q
    |||| ||| ||| ||||||||||||||  |||||||||||||||| |||| |||||||||| |||||| |||||    
T  72057 taactgaggtttatgttcatttcacac--attaagaaaaaatgtacaagtaaaagaaagagtaaaatagtttta 72128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 167
Target Start/End: Complemental strand, 4195088 - 4195038
Alignment:
Q  118 catttcacacttattaagaaaaaa-tgtataagtgaaagaaagagaaaaat 167  Q
    |||||||||||||||||||||||| ||||||||| ||||| ||||||||||    
T  4195088 catttcacacttattaagaaaaaagtgtataagtaaaagagagagaaaaat 4195038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 42819059 - 42819009
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaat 167  Q
    |||||||||||||||||||||||| ||||||||| ||||| | ||||||||    
T  42819059 tcatttcacacttattaagaaaaagtgtataagtaaaagagaaagaaaaat 42819009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 224
Target Start/End: Original strand, 35646045 - 35646149
Alignment:
Q  120 tttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtt-ttgtcgtgtattggtgcatttttcattatcataaatgc 218  Q
    |||||||| |||||||| ||| | ||||| |||| || |||||||||| |||||||||| | ||||   ||||||||||||| | || ||||||||||||    
T  35646045 tttcacacatattaagacaaa-tatataaatgaatgagagagaaaaatgattttaagtgatcttgttaagtattggtgcattctccactatcataaatgc 35646143  T
Q  219 aaagtg 224  Q
    ||||||    
T  35646144 aaagtg 35646149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 224
Target Start/End: Original strand, 39183575 - 39183687
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatc 210  Q
    ||||| |||||||||| ||||||||||| |||||||| ||||| | ||| |||||| |||||||||| ||| ||   |||||| || ||| | || ||||    
T  39183575 tttgtccatttcacacatattaagaaaa-atgtataaatgaaaaagagataaaaatgattttaagtgctttcgttaagtattgatgaattctccactatc 39183673  T
Q  211 ataaatgcaaagtg 224  Q
    ||||||||||||||    
T  39183674 ataaatgcaaagtg 39183687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 224
Target Start/End: Complemental strand, 3725341 - 3725234
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtt-ttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    ||||||||||| |||||||||||| |||||||  ||| || ||||||||||  ||||||||| | ||||   ||||||||||||| | || |||||||||    
T  3725341 tcatttcacacatattaagaaaaa-tgtataaaggaaggagagagaaaaatggttttaagtgctattgttaagtattggtgcattctccactatcataaa 3725243  T
Q  216 tgcaaagtg 224  Q
    |||| ||||    
T  3725242 tgcatagtg 3725234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 5357765 - 5357876
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatc 210  Q
    |||| ||||| ||||||||||||| |||||| ||| |||||| || ||||||||||  |||| ||||| |||||   |||||||| |||| ||| |||||    
T  5357765 tttgctcattacacacttattaag-aaaaatatattagtgaaggagagagaaaaatggttttgagtgtctttgttaagtattggttcattcttctttatc 5357863  T
Q  211 ataaatgcaaagt 223  Q
    ||||||| |||||    
T  5357864 ataaatgtaaagt 5357876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 16883875 - 16883931
Alignment:
Q  110 tttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaa 166  Q
    |||||||||||||||  | |||||||||||||| ||| ||||||||| |||||||||    
T  16883875 tttttgttcatttcatgcatattaagaaaaaatttatgagtgaaagagagagaaaaa 16883931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 25108727 - 25108622
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    ||||||||||| |||||||||||   ||| ||||||||||  |||||||||| |||| ||||| |||||   |||||| |||||| ||| ||||||||||    
T  25108727 tcatttcacacatattaagaaaaggagtaaaagtgaaaga--gagaaaaatagttttgagtgtctttgttaagtattgctgcattcttctttatcataaa 25108630  T
Q  216 tgcaaagt 223  Q
    || |||||    
T  25108629 tgtaaagt 25108622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 25167819 - 25167714
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    ||||||||||| |||||||||||   ||| ||||||||||  |||||||||| |||| ||||| |||||   |||||| |||||| ||| ||||||||||    
T  25167819 tcatttcacacatattaagaaaaggagtaaaagtgaaaga--gagaaaaatagttttgagtgtctttgttaagtattgctgcattcttctttatcataaa 25167722  T
Q  216 tgcaaagt 223  Q
    || |||||    
T  25167721 tgtaaagt 25167714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 25344693 - 25344797
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataatttt-aagtgttttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    ||||||||||| || ||||||||| ||||||||||||||| ||||||||||| |||| |||||||  |||   |||| |||||||   ||||||||||||    
T  25344693 tcatttcacacatactaagaaaaa-tgtataagtgaaagagagagaaaaatattttttaagtgtt--gtcaaatattagtgcattcaccattatcataaa 25344789  T
Q  216 tgcaaagt 223  Q
    || |||||    
T  25344790 tgtaaagt 25344797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 6172933 - 6173039
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    ||||||||||||||||||| |||||||||| ||||||  | ||| ||||||| ||||||||| | || ||   ||||  |||||||  ||||||||||||    
T  6172933 tcatttcacacttattaag-aaaaatgtattagtgaagaagagataaaaatagttttaagtgctcttatcaaatattaatgcatttaccattatcataaa 6173031  T
Q  216 tgcaaagt 223  Q
    ||||||||    
T  6173032 tgcaaagt 6173039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 145
Target Start/End: Complemental strand, 15898644 - 15898605
Alignment:
Q  106 gagttttttgttcatttcacacttattaagaaaaaatgta 145  Q
    |||| ||| |||||||||||||||||||||||||||||||    
T  15898644 gagtctttagttcatttcacacttattaagaaaaaatgta 15898605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 223
Target Start/End: Original strand, 36446644 - 36446746
Alignment:
Q  121 ttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtttt-gtcgtgtattggtgcatttttcattatcataaatgca 219  Q
    ||||||| |||||||||||| ||||||| |||| || | | |||||| ||| |||||||||| ||  |||||| ||||||| | || |||||||||||||    
T  36446644 ttcacacatattaagaaaaa-tgtataaatgaaggagataaaaaaatgattataagtgtttttgttatgtatttgtgcattctccactatcataaatgca 36446742  T
Q  220 aagt 223  Q
    ||||    
T  36446743 aagt 36446746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 182
Target Start/End: Complemental strand, 15254917 - 15254856
Alignment:
Q  120 tttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtttt 182  Q
    |||||||| |||||||||||| ||||||| || | |||| |||||||| ||||||||||||||    
T  15254917 tttcacacgtattaagaaaaa-tgtataaatggaggaaaaagaaaaatgattttaagtgtttt 15254856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 175
Target Start/End: Original strand, 28057783 - 28057840
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaa 175  Q
    ||||||||||| || |||||||| |||||||| |||| || ||||||||||||||||||    
T  28057783 tcatttcacacgtactaagaaaa-atgtataaatgaaggagagagaaaaataattttaa 28057840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 38979060 - 38979010
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaat 167  Q
    |||||||||||||||||||||||| |||| ||| |||||| | ||||||||    
T  38979060 tcatttcacacttattaagaaaaagtgtacaagggaaagagatagaaaaat 38979010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 173
Target Start/End: Complemental strand, 17700098 - 17700033
Alignment:
Q  109 ttttttgttcatttcacacttattaagaaaaaa-tgtataagtgaaagaaagagaaaaataatttt 173  Q
    ||||||| ||||||| ||  ||||||||||||| ||||||||||||| | |||||||||| |||||    
T  17700098 ttttttgctcatttcgcatatattaagaaaaaaatgtataagtgaaatagagagaaaaatgatttt 17700033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 223
Target Start/End: Complemental strand, 22983105 - 22982993
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaa-tgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattat 209  Q
    ||||||||||||||||| ||||||||||||| | ||||| ||||||| || ||||| || ||| ||| || || ||  ||||| |||||||  |  ||||    
T  22983105 ttttgttcatttcacacatattaagaaaaaaatatataaatgaaagagagggaaaa-tattttaaagagtcttttcaagtattagtgcattcctgcttat 22983007  T
Q  210 cataaatgcaaagt 223  Q
    ||||||||||||||    
T  22983006 cataaatgcaaagt 22982993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 41184815 - 41184755
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg 178  Q
    ||||||||||| |||||||||||| ||||||| |||| || | ||||||||| |||||||||    
T  41184815 tcatttcacacgtattaagaaaaa-tgtataaatgaaggagaaagaaaaatagttttaagtg 41184755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 4438016 - 4438072
Alignment:
Q  129 tattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtc 185  Q
    |||||||||||||| || |||| ||||| ||| ||||||| ||||||||| ||||||    
T  4438016 tattaagaaaaaatttagaagtaaaagagagataaaaatagttttaagtgatttgtc 4438072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 226
Target Start/End: Original strand, 8692765 - 8692880
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtt-ttgtcgtgtattggtgcatttttcattat 209  Q
    |||| ||| |||||||| |||||||| ||| | ||||| |||| ||  |||||||||  ||||||||||| ||||   ||||||||||||| | || |||    
T  8692765 tttttttcttttcacacatattaagacaaa-tatataaatgaaggagggagaaaaatggttttaagtgttcttgttaagtattggtgcattctccactat 8692863  T
Q  210 cataaatgcaaagtgaa 226  Q
    |||||||||||| ||||    
T  8692864 cataaatgcaaaatgaa 8692880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 109 - 223
Target Start/End: Complemental strand, 34814080 - 34813966
Alignment:
Q  109 ttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtt-ttgtcgtgtattggtgcatttttcatt 207  Q
    ||||||| |||||||||||||||||||||||| ||||| |||||| || ||||||||||| ||||||||||| ||||   ||||| |||||||| |||||    
T  34814080 ttttttgctcatttcacacttattaagaaaaa-tgtattagtgaaggagagagaaaaatagttttaagtgttcttgttaagtattagtgcatttatcatt 34813982  T
Q  208 atcataaatgcaaagt 223  Q
    ||||||||||||||||    
T  34813981 atcataaatgcaaagt 34813966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 179
Target Start/End: Original strand, 10587534 - 10587596
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt 179  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  10587534 tcatttcacacttattaagaaaaagtgcataagtgaaagaaagagaaaaataattttaagtgt 10587596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 226
Target Start/End: Complemental strand, 32587920 - 32587811
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtttt-gtcgtgtattggtgcatttttcattatcataaa 215  Q
    ||||||||||| |||||||||||| ||||||| |||| |  ||||||||||||||||||||||||| ||   |||||| |||||||| ||||||||||||    
T  32587920 tcatttcacacatattaagaaaaa-tgtataaatgaaggtgagagaaaaataattttaagtgtttttgttaagtattgatgcattttccattatcataaa 32587822  T
Q  216 tgcaaagtgaa 226  Q
    |||||||||||    
T  32587821 tgcaaagtgaa 32587811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 106 - 200
Target Start/End: Complemental strand, 39420754 - 39420659
Alignment:
Q  106 gagttttttgttcatttcacacttattaagaaaaaa-tgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatt 200  Q
    |||| ||||||||||||||| | ||||||||||||| ||||||| ||||||| |||||||||||||||| ||||| |||||  |||||||||||||    
T  39420754 gagtcttttgttcatttcacgcatattaagaaaaaagtgtataaatgaaagagagagaaaaataattttgagtgtcttgtcaagtattggtgcatt 39420659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 117 - 221
Target Start/End: Complemental strand, 26583884 - 26583779
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| | ||| ||||  ||| ||   |||||||||||| ||| ||||||||||    
T  26583884 tcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgagtttgagtgcctttatcaactattggtgcattcttctttatcataaa 26583785  T
Q  216 tgcaaa 221  Q
    ||||||    
T  26583784 tgcaaa 26583779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 241
Target Start/End: Complemental strand, 34332276 - 34332139
Alignment:
Q  106 gagttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaa--taattttaagtgt-tttgtcgtgtattggtgcatttt 202  Q
    |||| ||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||  | ||||| ||| | ||| ||  ||||| |||||||      
T  34332276 gagtcttttgttcatttcacacatattaaga-aaaatgtataagtgaaagagagagaaaaaagtgatttttagtatctttatcaagtattagtgcattca 34332178  T
Q  203 tcattatcataaatgcaaagtgaagggtgttgaattggg 241  Q
     |||||||||||||||||| || ||| ||||||||||||    
T  34332177 ccattatcataaatgcaaaatggaggatgttgaattggg 34332139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 106 - 216
Target Start/End: Complemental strand, 7224567 - 7224457
Alignment:
Q  106 gagttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttca 205  Q
    |||| ||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||  |||| ||| | ||| |  |||||| ||||||  ||     
T  7224567 gagtcttttgttcatttcacacatattaaaaaaaaatgtataagtgaaagaaagcgaaaaatggttttgagtttcttgacaagtattgatgcattcctcc 7224468  T
Q  206 ttatcataaat 216  Q
    |||||||||||    
T  7224467 ttatcataaat 7224457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 26760432 - 26760382
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaat 167  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26760432 tcatttcacacttattaagaaaaaatgtataagtgaaagagagagaaaaat 26760382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 223
Target Start/End: Original strand, 3718797 - 3718908
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattat 209  Q
    ||||| ||||||||||||||||||| |||||||||| | || |||| ||||||||||| ||||||||| | |||||  ||||| |||||||| |||||||    
T  3718797 ttttgctcatttcacacttattaag-aaaaatgtattaatg-aagagagagaaaaatagttttaagtgctcttgtcaagtatttgtgcatttatcattat 3718894  T
Q  210 cataaatgcaaagt 223  Q
    |||||||| |||||    
T  3718895 cataaatgtaaagt 3718908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 223
Target Start/End: Original strand, 37541064 - 37541172
Alignment:
Q  116 ttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatcataa 214  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||  |||| | ||| ||| ||   |||||||||||| ||| |||| ||||    
T  37541064 ttcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatggttttgaatgtctttatcaactattggtgcattcttctttattataa 37541163  T
Q  215 atgcaaagt 223  Q
    ||| |||||    
T  37541164 atgtaaagt 37541172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 115 - 226
Target Start/End: Original strand, 50267389 - 50267500
Alignment:
Q  115 gttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcata 213  Q
    ||||||||||||| ||||||||||| |||||||| ||||||  ||||||||||| |||||||||   ||||   ||||||||||||| | ||||||||||    
T  50267389 gttcatttcacacgtattaagaaaa-atgtataaatgaaagtgagagaaaaatagttttaagtgcacttgttaagtattggtgcattctccattatcata 50267487  T
Q  214 aatgcaaagtgaa 226  Q
    |||| ||||||||    
T  50267488 aatgtaaagtgaa 50267500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 224
Target Start/End: Original strand, 52830367 - 52830474
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    ||||||||||| |||||| ||||||||||||| |||| || |||||||||||||||| ||||  |||||   ||||||||||||||| || |||||||||    
T  52830367 tcatttcacacgtattaa-aaaaaatgtataaatgaaggagagagaaaaataattttgagtgcatttgttaagtattggtgcattttccactatcataaa 52830465  T
Q  216 tgcaaagtg 224  Q
    || ||||||    
T  52830466 tgtaaagtg 52830474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 120 - 223
Target Start/End: Complemental strand, 2571514 - 2571412
Alignment:
Q  120 tttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattatcataaatgca 219  Q
    |||||||| |||||||||||||||||||| ||||||| |||| |||||| |||| ||||| ||||   ||||||||||||| ||  ||||| ||||||||    
T  2571514 tttcacacatattaagaaaaaatgtataaatgaaagagagag-aaaatagttttgagtgtcttgttaagtattggtgcattatttcttatcctaaatgca 2571416  T
Q  220 aagt 223  Q
    ||||    
T  2571415 aagt 2571412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 3160639 - 3160746
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    |||||||||||||||||||||||| ||||||||||||||| | ||||||||   ||| ||||   |||||   |||||||||||| ||| ||||||||||    
T  3160639 tcatttcacacttattaagaaaaagtgtataagtgaaagagaaagaaaaatgggtttgagtgcccttgtcaactattggtgcattattctttatcataaa 3160738  T
Q  216 tgcaaagt 223  Q
    ||||||||    
T  3160739 tgcaaagt 3160746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 26924072 - 26924179
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||||||| | ||| ||||   || ||   |||||||||||| ||| ||||||||||    
T  26924072 tcatttcacacttattaagaaaaagtgtaaaagtgaaagagagagaaaaatgagtttgagtgcccttatcaactattggtgcattcttctttatcataaa 26924171  T
Q  216 tgcaaagt 223  Q
    ||||||||    
T  26924172 tgcaaagt 26924179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 29756094 - 29756201
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||   ||| ||||   || ||   |||||||||||| ||| ||||||||||    
T  29756094 tcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgggtttgagtgcccttatcaactattggtgcattcttctttatcataaa 29756193  T
Q  216 tgcaaagt 223  Q
    ||||||||    
T  29756194 tgcaaagt 29756201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 37925194 - 37925305
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaa----agaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatca 211  Q
    |||||| ||||||||||||||||| ||||||||||||    ||| |||||||||| ||||| |||| | || ||   |||||||||||||||| ||||||    
T  37925194 tcatttaacacttattaagaaaaagtgtataagtgaaagagagagagagaaaaatgatttttagtgctcttatcaattattggtgcatttttctttatca 37925293  T
Q  212 taaatgcaaagt 223  Q
    ||||||||||||    
T  37925294 taaatgcaaagt 37925305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 226
Target Start/End: Complemental strand, 42926289 - 42926180
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    |||||| |||| |||||||||||| ||||||| |||| ||||||||||||| |||||||||| ||||||   |||| |||||||| | || |||||||||    
T  42926289 tcatttgacacatattaagaaaaa-tgtataaatgaatgaaagagaaaaatgattttaagtgtttttgttaagtatcggtgcattctccactatcataaa 42926191  T
Q  216 tgcaaagtgaa 226  Q
    |||||| ||||    
T  42926190 tgcaaaatgaa 42926180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 25819340 - 25819405
Alignment:
Q  158 agagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattatcataaatgcaaagt 223  Q
    |||||||||||||||| ||||||||||| | ||||||||||||  || ||||||||||||||||||    
T  25819340 agagaaaaataattttgagtgttttgtcatttattggtgcattcctccttatcataaatgcaaagt 25819405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 112 - 224
Target Start/End: Complemental strand, 27391507 - 27391395
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatc 210  Q
    |||||||| ||||||||||||| |||||| |||||||||||| || |||||||||| |||||||||| | || |   |||||||| |||||   ||||||    
T  27391507 tttgttcaattcacacttattacgaaaaa-tgtataagtgaaggagagagaaaaatgattttaagtgctcttattaagtattggttcatttactattatc 27391409  T
Q  211 ataaatgcaaagtg 224  Q
    ||||||||||||||    
T  27391408 ataaatgcaaagtg 27391395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 174
Target Start/End: Original strand, 13409724 - 13409787
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataatttta 174  Q
    |||| |||||||||||  |||||||||||||| |||||||||||| |||||||||||| |||||    
T  13409724 ttttattcatttcacatatattaagaaaaaatatataagtgaaaggaagagaaaaatagtttta 13409787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 221
Target Start/End: Complemental strand, 40061961 - 40061860
Alignment:
Q  120 tttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtt-ttgtcgtgtattggtgcatttttcattatcataaatgc 218  Q
    ||||||||||||||| || ||||||||||| |||  | |||||||||| ||||||| |||| || ||  |||||| | ||||||||||||||||||||||    
T  40061961 tttcacacttattaa-aagaaatgtataagcgaagaagagagaaaaatgattttaaatgttcttatcaagtattgttacatttttcattatcataaatgc 40061863  T
Q  219 aaa 221  Q
    |||    
T  40061862 aaa 40061860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 46273327 - 46273209
Alignment:
Q  106 gagttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttc 204  Q
    |||||||||||| |||| |||  |||||||||||||||||||| ||||  | | |||||||||||||| | || |||||||  |||||| |||||| |||    
T  46273327 gagttttttgttaatttgacaaatattaagaaaaaatgtataaatgaataagatagaaaaataattttgaatgtttttgtcaagtattgatgcattcttc 46273228  T
Q  205 attatcataaatgcaaagt 223  Q
     ||||| |||||| |||||    
T  46273227 tttatcttaaatgtaaagt 46273209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 224
Target Start/End: Original strand, 13500682 - 13500789
Alignment:
Q  119 atttcacacttattaagaaaaaatgtataagtgaaagaaaga--gaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    |||| |||| |||||||||||| ||||||| |||| || |||  || |||| |||||||||| ||||||  |||||||||||||| |||| |||||||||    
T  13500682 attttacacatattaagaaaaa-tgtataaatgaatgagagaaagagaaatgattttaagtgcttttgttatgtattggtgcattcttcactatcataaa 13500780  T
Q  216 tgcaaagtg 224  Q
    |||||||||    
T  13500781 tgcaaagtg 13500789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 222
Target Start/End: Original strand, 27209921 - 27210025
Alignment:
Q  118 catttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatcataaat 216  Q
    ||||| |||| |||||||||||  ||||||| ||||||| |||||||||| ||||| ||||| |||| |  ||||||||||||| ||| |||||||||||    
T  27209921 cattttacacatattaagaaaag-tgtataaatgaaagagagagaaaaatgattttgagtgtctttgacaagtattggtgcattcttctttatcataaat 27210019  T
Q  217 gcaaag 222  Q
    | ||||    
T  27210020 gtaaag 27210025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 179
Target Start/End: Original strand, 35946960 - 35947032
Alignment:
Q  106 gagttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt 179  Q
    |||| |||||||||||| | |  |||||| |||||||||||||||||||||| ||||||||||||||| |||||    
T  35946960 gagtcttttgttcattttataaatattaa-aaaaaatgtataagtgaaagaacgagaaaaataattttgagtgt 35947032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 46363362 - 46363470
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg--ttttgtcgtgtattggtgcatttttcattatcataa 214  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||| ||||   ||| ||||   ||| ||   |||||||||||| ||| |||||||||    
T  46363362 tcatttcacacttattaagaaaaagtgtataagtgagagagagagagaaatgtgtttgagtgcactttatcaactattggtgcattcttctttatcataa 46363461  T
Q  215 atgcaaagt 223  Q
    |||||||||    
T  46363462 atgcaaagt 46363470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 49494116 - 49494176
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg 178  Q
    ||||||||||| ||||||||||| |||||||| ||||||| ||||||||||| |||||||||    
T  49494116 tcatttcacacgtattaagaaaa-atgtataaatgaaagagagagaaaaatagttttaagtg 49494176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 178
Target Start/End: Complemental strand, 4659597 - 4659526
Alignment:
Q  106 gagttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg 178  Q
    |||| |||||| ||||||||||||||||||| ||||||||| |||||| |  ||||||||||| |||||||||    
T  4659597 gagtcttttgtccatttcacacttattaaga-aaaatgtattagtgaaggggagagaaaaatagttttaagtg 4659526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 117 - 168
Target Start/End: Complemental strand, 14090792 - 14090743
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaata 168  Q
    |||||||||||||||||||| ||||||||||||||||||  |||||||||||    
T  14090792 tcatttcacacttattaagacaaaatgtataagtgaaag--agagaaaaata 14090743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 29225346 - 29225467
Alignment:
Q  106 gagttttttgttcatttcacacttattaagaaaaaat---gtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcattt 201  Q
    |||| ||||| ||||||||||| |||||||||||| |   ||||||||||||||  ||||||||| ||||| ||||  |||||   |||||||||||||     
T  29225346 gagtcttttgctcatttcacacatattaagaaaaagtgtagtataagtgaaagagtgagaaaaatgattttgagtgcctttgttaagtattggtgcattc 29225445  T
Q  202 ttcattatcataaatgcaaagt 223  Q
    ||  |||||||||||| |||||    
T  29225446 ttttttatcataaatggaaagt 29225467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 226
Target Start/End: Original strand, 36037051 - 36037170
Alignment:
Q  111 ttttgttcatttcacacttattaa----gaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtt-ttgtcgtgtattggtgcatttttca 205  Q
    ||||||||||||||||| ||||||    |||||| |||||||||||||||  |||||||||| |||| ||| |  |||||  ||||| ||| ||| ||||    
T  36037051 ttttgttcatttcacacatattaattatgaaaaagtgtataagtgaaagagtgagaaaaata-ttttcagtatccttgtcaagtattagtgtattcttca 36037149  T
Q  206 ttatcataaatgcaaagtgaa 226  Q
    |||||||||||| ||||||||    
T  36037150 ttatcataaatgtaaagtgaa 36037170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 40019919 - 40019805
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatc 210  Q
    ||||||||||| ||||| ||||||||||| |||||||||||| || ||||||||||  ||||||||| | |||||  ||||| ||| |||   |||||||    
T  40019919 tttgttcattttacactgattaagaaaaa-tgtataagtgaatgagagagaaaaattgttttaagtgctcttgtcaagtatttgtgtattcaccattatc 40019821  T
Q  211 ataaatgcaaagtgaa 226  Q
    |||||  |||||||||    
T  40019820 ataaagacaaagtgaa 40019805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 164
Target Start/End: Original strand, 40754366 - 40754413
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaa 164  Q
    |||||||| ||||||||||||||| ||||||||||||||| |||||||    
T  40754366 tcatttcatacttattaagaaaaagtgtataagtgaaagagagagaaa 40754413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 49945092 - 49944978
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtt-ttgtcgtgtattggtgcatttttcattatc 210  Q
    |||| ||||||||||| |||||||||||| ||||||| ||||  | ||||||||||  ||||||||| | ||||   ||||| ||||||| |||  ||||    
T  49945092 tttgctcatttcacacatattaagaaaaa-tgtataaatgaagaagagagaaaaatggttttaagtgctcttgttaagtatttgtgcattcttctctatc 49944994  T
Q  211 ataaatgcaaagtgaa 226  Q
    ||||||||||||||||    
T  49944993 ataaatgcaaagtgaa 49944978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 50926903 - 50926796
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    ||||||||||  |||||||||||| ||||||||  ||||| ||||||||||  |||| | ||  ||||||  ||||||||||||| ||| ||||||||||    
T  50926903 tcatttcacatatattaagaaaaattgtataagaaaaagagagagaaaaatggttttgaatgcatttgtcaagtattggtgcattcttctttatcataaa 50926804  T
Q  216 tgcaaagt 223  Q
    || |||||    
T  50926803 tgtaaagt 50926796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 16956699 - 16956649
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaat 167  Q
    |||||| |||| |||||||||||| |||||||||||||| |||||||||||    
T  16956699 tcatttgacacatattaagaaaaagtgtataagtgaaaggaagagaaaaat 16956649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 29225896 - 29225802
Alignment:
Q  130 attaagaaaaaatgtataagtgaaagaaagaga-aaaataattttaagtgttttgtcgtgtattggtgcatttttcattatcataaatgcaaagt 223  Q
    ||||||||||| |||| |||||||||| ||||| ||||||  ||| ||||| |||||  |||||||||||||  |  ||||||||||||||||||    
T  29225896 attaagaaaaagtgtacaagtgaaagagagagagaaaataggtttgagtgtcttgtcaagtattggtgcattcattcttatcataaatgcaaagt 29225802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 42309589 - 42309518
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtc 185  Q
    |||||||||||||||  |||||||||||||| ||||||||||||  || |||||||  |||||||||| |||||    
T  42309589 tttgttcatttcacatatattaagaaaaaatatataagtgaaag--agtgaaaaatggttttaagtgtgttgtc 42309518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 27698959 - 27698899
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg 178  Q
    ||||||||||| |||||||||||| ||||||| |||| |||| | |||||||||||||||||    
T  27698959 tcatttcacacgtattaagaaaaa-tgtataaatgaaggaaataaaaaaataattttaagtg 27698899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 36467148 - 36467208
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg 178  Q
    ||||||||||| ||||||||||| |||||||| |||| || ||||||||||| |||||||||    
T  36467148 tcatttcacacgtattaagaaaa-atgtataaatgaatgagagagaaaaatagttttaagtg 36467208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 45305967 - 45305902
Alignment:
Q  158 agagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattatcataaatgcaaagt 223  Q
    |||| ||||||||||| ||||| |||||  |||||  |||||| ||||||||||||||||||||||    
T  45305967 agaggaaaataattttgagtgtcttgtcaagtatttatgcattcttcattatcataaatgcaaagt 45305902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 11425817 - 11425928
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatc 210  Q
    |||| |||||||||  ||||||||||||| | ||| |||||| || ||||||||||| |||| ||||| |||||   |||||||| |||| ||| |||||    
T  11425817 tttgctcatttcacgtttattaagaaaaa-tatattagtgaaggagagagaaaaatagttttgagtgtctttgttaagtattggtccattcttctttatc 11425915  T
Q  211 ataaatgcaaagt 223  Q
    ||||||| |||||    
T  11425916 ataaatgtaaagt 11425928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 223
Target Start/End: Complemental strand, 16040237 - 16040126
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatc 210  Q
    |||| |||||||||| ||||||||| ||||| ||| ||| || || ||||||||||  |||||||||| |||||   |||||||| |||| ||| |||||    
T  16040237 tttgctcatttcacatttattaaga-aaaatatattagtcaaggagagagaaaaatggttttaagtgtctttgttaagtattggttcattcttctttatc 16040139  T
Q  211 ataaatgcaaagt 223  Q
    ||||||| |||||    
T  16040138 ataaatgtaaagt 16040126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 217
Target Start/End: Original strand, 28706577 - 28706676
Alignment:
Q  118 catttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatcataaat 216  Q
    |||||||||| |||||| ||||||||||||| ||||  | ||||||||||  |||| ||||  ||||||  |||||| |||||||||| |||||||||||    
T  28706577 catttcacacatattaa-aaaaaatgtataaatgaataagagagaaaaatggttttgagtgcctttgtcaagtattgatgcatttttctttatcataaat 28706675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 167
Target Start/End: Complemental strand, 40988512 - 40988456
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaat 167  Q
    |||| |||||||||||| ||||||||||||  |||||||||||||| ||||| ||||    
T  40988512 tttttttcatttcacacatattaagaaaaatagtataagtgaaagagagagacaaat 40988456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 115 - 223
Target Start/End: Complemental strand, 1861710 - 1861605
Alignment:
Q  115 gttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtttt-gtcgtgtattggtgcatttttcattatcata 213  Q
    |||||||| |||| |||||| |||||||| ||||||||| ||||   |||||||||||||||| |||| |||  |||||| ||||||  | |||||||||    
T  1861710 gttcattttacacatattaataaaaaatgcataagtgaa-gaaa---aaaaataattttaagtatttttgtctagtattgatgcattcattattatcata 1861615  T
Q  214 aatgcaaagt 223  Q
    |||| |||||    
T  1861614 aatgtaaagt 1861605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 112 - 167
Target Start/End: Original strand, 4466102 - 4466156
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaat 167  Q
    |||||||||||||||||||||||| |||||| ||| |||||| || ||||||||||    
T  4466102 tttgttcatttcacacttattaag-aaaaatatattagtgaatgagagagaaaaat 4466156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 7785219 - 7785336
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaa-agagaaaaataattttaagtgtt-ttgtcgt--gtattggtgcatttttcatt 207  Q
    |||| ||||||||||| || ||||||||| ||||||| ||||| || ||||||||||| ||||||||||| ||||  |  |||||| |||||| | || |    
T  7785219 tttgctcatttcacacatactaagaaaaa-tgtataaatgaaataagagagaaaaatagttttaagtgttattgttataagtattgatgcattctccact 7785317  T
Q  208 atcataaatgcaaagtgaa 226  Q
    |||||||||| ||||||||    
T  7785318 atcataaatgtaaagtgaa 7785336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 226
Target Start/End: Original strand, 19532873 - 19532981
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    ||||||||||| ||||||  |||||| ||||| |||| || ||||||||||| ||||||||||  ||||   |||||||| |||| | || |||||||||    
T  19532873 tcatttcacacctattaa--aaaaatatataaatgaaggatagagaaaaatagttttaagtgtacttgttaagtattggttcattctccactatcataaa 19532970  T
Q  216 tgcaaagtgaa 226  Q
    || ||||||||    
T  19532971 tgtaaagtgaa 19532981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 156
Target Start/End: Original strand, 24131354 - 24131393
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaaga 156  Q
    ||||||||||||||||||||||||  ||||||||||||||    
T  24131354 tcatttcacacttattaagaaaaagcgtataagtgaaaga 24131393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 221
Target Start/End: Original strand, 25983570 - 25983685
Alignment:
Q  101 taacggagttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatt 200  Q
    |||| |||| ||||||||||| ||||| |||||||||||| |||||||||||||||    | |||||  |||||||||| || |   |||||||||||||    
T  25983570 taactgagtcttttgttcatt-cacacatattaagaaaaagtgtataagtgaaaga----gtaaaattgttttaagtgtcttattaagtattggtgcatt 25983664  T
Q  201 tttcattatcataaatgcaaa 221  Q
      |  ||||||||||||||||    
T  25983665 catttttatcataaatgcaaa 25983685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 705303 - 705357
Alignment:
Q  119 atttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataatttt 173  Q
    |||||| || |||||||||||||||||||||| ||||| | |||||||| |||||    
T  705303 atttcatacatattaagaaaaaatgtataagttaaagagaaagaaaaatgatttt 705357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 177
Target Start/End: Complemental strand, 28908247 - 28908183
Alignment:
Q  114 tgttcatttcacacttattaagaaaaaatgtataagtgaa--agaaagagaaaaataattttaagt 177  Q
    |||||||||||||| |||||||| ||||||||||| ||||  ||| |||||||||| |||||||||    
T  28908247 tgttcatttcacacatattaaga-aaaatgtataaatgaaggagagagagaaaaatgattttaagt 28908183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 163
Target Start/End: Original strand, 50773301 - 50773347
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaa 163  Q
    ||||||| |||||||||||||||  ||||||||||||||| ||||||    
T  50773301 tcatttcgcacttattaagaaaacgtgtataagtgaaagagagagaa 50773347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 51749157 - 51749243
Alignment:
Q  139 aaatgtataagtgaaagaaagagaaaaataattttaagtgtt-ttgtcgtgtattggtgcatttttcattatcataaatgcaaagtg 224  Q
    |||||||||| |||| || |||||||| | |||||||||||| ||||   ||||||||  ||| | |||||||||||||||||||||    
T  51749157 aaatgtataaatgaaggagagagaaaactgattttaagtgttcttgttaagtattggtttattctccattatcataaatgcaaagtg 51749243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 162
Target Start/End: Complemental strand, 2886368 - 2886323
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagaga 162  Q
    |||||||| ||||||||||||||| ||||||||||| ||| |||||    
T  2886368 tcatttcatacttattaagaaaaagtgtataagtgagagagagaga 2886323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 177
Target Start/End: Complemental strand, 84375 - 84335
Alignment:
Q  137 aaaaatgtataagtgaaagaaagagaaaaataattttaagt 177  Q
    ||||||||| |||||||||| ||||||||||| ||||||||    
T  84375 aaaaatgtagaagtgaaagatagagaaaaatagttttaagt 84335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 5503574 - 5503538
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaa 153  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  5503574 tcatttcacacttattaagaaaaagtgtataaatgaa 5503538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 241
Target Start/End: Complemental strand, 27831961 - 27831877
Alignment:
Q  158 agagaaaaataattttaagtgtt-ttgtcgtgtattggtgcatttttcattatcataaatgcaaagtgaagggtgttgaattggg 241  Q
    ||||||||||| |||||||||   |||||  |||||||||||||   ||||||||||||||||||||| | | | ||||||||||    
T  27831961 agagaaaaatagttttaagtgcccttgtcaagtattggtgcattcaccattatcataaatgcaaagtggaagatattgaattggg 27831877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 216
Target Start/End: Original strand, 36232761 - 36232841
Alignment:
Q  137 aaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatcataaat 216  Q
    |||| |||||||  |||||| |||||||||| ||||| ||||| |||| |  ||||||||||||| ||| |||||||||||    
T  36232761 aaaagtgtataaacgaaagagagagaaaaatgattttgagtgtctttgacaagtattggtgcattcttctttatcataaat 36232841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 49662704 - 49662765
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaa-aatgtataagtgaaagaaagagaaaaataatttt 173  Q
    ||||||| ||||||||  ||||||||||| ||||||||||||||||  |||||||||| |||||    
T  49662704 ttttgtttatttcacaaatattaagaaaaaaatgtataagtgaaag--agagaaaaatgatttt 49662765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 110 - 223
Target Start/End: Complemental strand, 2797202 - 2797089
Alignment:
Q  110 tttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattat 209  Q
    |||||||||||||||||  |||||||||||| || |||||||||||||||||||||||  |||| ||||||||||| | || || |||||| ||  ||||    
T  2797202 tttttgttcatttcacaactattaagaaaaagtgaataagtgaaagaaagagaaaaatggttttgagtgttttgtcatttactgatgcattcttacttat 2797103  T
Q  210 cataaatgcaaagt 223  Q
    ||||||||||||||    
T  2797102 cataaatgcaaagt 2797089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 112 - 224
Target Start/End: Original strand, 42412330 - 42412442
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatc 210  Q
    |||| ||||||||||| ||||||||||| ||||||||||||| || ||||||||||| ||||||||| | ||||| | |||||||||||| | |||||||    
T  42412330 tttgctcatttcacacatattaagaaaa-atgtataagtgaatgagagagaaaaatagttttaagtgctcttgtcatatattggtgcattctccattatc 42412428  T
Q  211 ataaatgcaaagtg 224  Q
    ||||||||||||||    
T  42412429 ataaatgcaaagtg 42412442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 120 - 223
Target Start/End: Complemental strand, 2195620 - 2195517
Alignment:
Q  120 tttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattatcataaatgca 219  Q
    |||||||| |||||||||||| ||||||||||||||| ||||||||||| |||| ||||| ||||   ||||||||||||| ||  ||||||||||||||    
T  2195620 tttcacacatattaagaaaaagtgtataagtgaaagagagagaaaaatagttttgagtgtcttgttaagtattggtgcattctttcttatcataaatgca 2195521  T
Q  220 aagt 223  Q
    ||||    
T  2195520 aagt 2195517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 14690116 - 14690009
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||  |||| |||||  || ||   |||||||||||| ||  ||||||||||    
T  14690116 tcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatggttttgagtgtccttatcaactattggtgcattcttttttatcataaa 14690017  T
Q  216 tgcaaagt 223  Q
    ||||||||    
T  14690016 tgcaaagt 14690009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 109 - 239
Target Start/End: Original strand, 26570096 - 26570226
Alignment:
Q  109 ttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcatt 207  Q
    |||||| ||||||||| || |||||||| ||||  ||||||||||  | ||||| |||||||||| |||| |||||||  |||||| ||||||  |||||    
T  26570096 ttttttattcatttcatacatattaagataaaaa-tataagtgaataagagagagaaataattttgagtgattttgtcaagtattgatgcattcgtcatt 26570194  T
Q  208 atcataaatgcaaagtgaagggtgttgaattg 239  Q
    ||||||||||||||||| ||| ||||||||||    
T  26570195 atcataaatgcaaagtggaggatgttgaattg 26570226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 110 - 223
Target Start/End: Original strand, 2875033 - 2875144
Alignment:
Q  110 tttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattat 209  Q
    |||||||||||||||||  |||||||||||  || |||||||||||||||||||||||    || ||||||||||| | ||||| | |||| ||| ||||    
T  2875033 tttttgttcatttcacaactattaagaaaaggtgaataagtgaaagaaagagaaaaat--ggttcagtgttttgtcatttattgatacattcttccttat 2875130  T
Q  210 cataaatgcaaagt 223  Q
    ||||||||||||||    
T  2875131 cataaatgcaaagt 2875144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 27868266 - 27868383
Alignment:
Q  106 gagttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtt-ttgtcgtgtattggtgcatttttc 204  Q
    |||| ||||| ||||||||||||||||||| |||||||||| |||||| ||  |||||||||  ||||| ||||| |||||  |||||| | ||||| ||    
T  27868266 gagtattttgctcatttcacacttattaag-aaaaatgtattagtgaatgatggagaaaaatggttttacgtgttcttgtcaagtattgatccatttatc 27868364  T
Q  205 attatcataaatgcaaagt 223  Q
    |||||||||||||||||||    
T  27868365 attatcataaatgcaaagt 27868383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 44225885 - 44225979
Alignment:
Q  129 tattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattatcataaatgcaaagt 223  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||| | ||||||   |||||||||||||  |  | ||||||||||||||||    
T  44225885 tattaagaaaaagtgtatacgtgaaagaaagagaaaaataattttaaatattttgttaagtattggtgcattcattttcatcataaatgcaaagt 44225979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 112 - 224
Target Start/End: Complemental strand, 5392209 - 5392097
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatc 210  Q
    |||| ||||||||||| |||||||| ||| ||||||| |||| || ||||||||||  ||||||||| |||||||  ||||||||||||| | || ||||    
T  5392209 tttgctcatttcacacctattaagacaaa-tgtataaatgaaggagagagaaaaatggttttaagtgcttttgtcaagtattggtgcattctccactatc 5392111  T
Q  211 ataaatgcaaagtg 224  Q
    ||||||||||||||    
T  5392110 ataaatgcaaagtg 5392097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 101 - 221
Target Start/End: Original strand, 7258303 - 7258423
Alignment:
Q  101 taacggagttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtt-ttgtcgtgtattggtgcat 199  Q
    |||| ||||| |||| | |||||||||||||||| ||||||| ||| | |||| |||||||||||||  ||||||| | | |||||  ||||||||||||    
T  7258303 taactgagttctttgcttatttcacacttattaa-aaaaaatatattaatgaaggaaagagaaaaatggttttaagcgctcttgtcaagtattggtgcat 7258401  T
Q  200 ttttcattatcataaatgcaaa 221  Q
    || |||||||||||||||||||    
T  7258402 ttatcattatcataaatgcaaa 7258423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 223
Target Start/End: Original strand, 15559077 - 15559188
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtt-ttgtcgtgtattggtgcatttttcattat 209  Q
    ||||||||||| |||| ||||||||||||| ||||| |||||| || ||| |||||| |||||||||||| |||||  ||||||||| ||||  ||||||    
T  15559077 ttttgttcatt-cacatttattaagaaaaa-tgtattagtgaaggagagacaaaaatgattttaagtgttcttgtcaagtattggtgtatttaccattat 15559174  T
Q  210 cataaatgcaaagt 223  Q
    ||||||||||||||    
T  15559175 cataaatgcaaagt 15559188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 223
Target Start/End: Original strand, 27973632 - 27973744
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtt-ttgtcgtgtattggtgcatttttcattat 209  Q
    ||||| ||||||||||||||||||| |||||||||| |||||| ||  |||||||||  ||||||||||| |||||  |||||| | |||||  ||||||    
T  27973632 ttttgctcatttcacacttattaag-aaaaatgtattagtgaaggatggagaaaaatggttttaagtgttcttgtcaagtattgatccatttaccattat 27973730  T
Q  210 cataaatgcaaagt 223  Q
    ||||||||||||||    
T  27973731 cataaatgcaaagt 27973744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 223
Target Start/End: Original strand, 28030901 - 28031013
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtt-ttgtcgtgtattggtgcatttttcattat 209  Q
    ||||| ||||||||||||||||||| |||||||||| |||||| ||  |||||||||  ||||||||||| |||||  |||||| | |||||  ||||||    
T  28030901 ttttgctcatttcacacttattaag-aaaaatgtattagtgaaggatggagaaaaatggttttaagtgttcttgtcaagtattgatccatttaccattat 28030999  T
Q  210 cataaatgcaaagt 223  Q
    ||||||||||||||    
T  28031000 cataaatgcaaagt 28031013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 167
Target Start/End: Original strand, 45420890 - 45420940
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaat 167  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  45420890 tcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaat 45420940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 33746171 - 33746231
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg 178  Q
    ||||||||||| |||||| ||||||||||||| ||||||||| |||||||||||||||||||    
T  33746171 tcatttcacacgtattaa-aaaaaatgtataaatgaaagaaaaagaaaaataattttaagtg 33746231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 1494199 - 1494306
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    ||||||||||||||||||| ||||||||||| ||||||||  ||||||||| ||||| ||||   || ||   ||||| |||||| ||| ||||||||||    
T  1494199 tcatttcacacttattaaggaaaaatgtatatgtgaaagagtgagaaaaatgattttgagtgcccttatcaattattgatgcattcttctttatcataaa 1494298  T
Q  216 tgcaaagt 223  Q
    ||||||||    
T  1494299 tgcaaagt 1494306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 167
Target Start/End: Complemental strand, 33743933 - 33743882
Alignment:
Q  116 ttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaat 167  Q
    ||||||||||||||||||||||||| ||||||| ||||||| ||||||||||    
T  33743933 ttcatttcacacttattaagaaaaagtgtataaatgaaagagagagaaaaat 33743882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 167
Target Start/End: Original strand, 32231337 - 32231387
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaat 167  Q
    |||||||||| ||||||||||||||||||||||||||||| |||| |||||    
T  32231337 tcatttcacatttattaagaaaaaatgtataagtgaaagagagaggaaaat 32231387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 224
Target Start/End: Original strand, 138652 - 138758
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    ||||||||||   ||||||||||||||||||| ||||   ||||||||||| |||||||||| ||||||  |||||||||| |||||    |||||||||    
T  138652 tcatttcacatacattaagaaaaaatgtataaatgaag--aagagaaaaatgattttaagtgtttttgttatgtattggtggattttcttctatcataaa 138749  T
Q  216 tgcaaagtg 224  Q
    |||||||||    
T  138750 tgcaaagtg 138758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 224
Target Start/End: Original strand, 32241379 - 32241483
Alignment:
Q  120 tttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtt-ttgtcgtgtattggtgcatttttcattatcataaatgc 218  Q
    |||||||| |||||||| ||| ||||||| |||| || ||| |||||| |||||||||||| ||||   |||||| |||||| |||| ||||||||||||    
T  32241379 tttcacacatattaagacaaa-tgtataaatgaaggagagataaaaatgattttaagtgttcttgttaagtattgatgcattcttcactatcataaatgc 32241477  T
Q  219 aaagtg 224  Q
    ||||||    
T  32241478 aaagtg 32241483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 117 - 224
Target Start/End: Original strand, 22324907 - 22325014
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    ||||||||||  ||||||||||| |||||||| |||| || ||||||||||||||||||||||  ||||    |||| ||||||||| || |||||||||    
T  22324907 tcatttcacaagtattaagaaaa-atgtataaatgaaggagagagaaaaataattttaagtgtacttgttaaatattagtgcattttccactatcataaa 22325005  T
Q  216 tgcaaagtg 224  Q
    || ||||||    
T  22325006 tgtaaagtg 22325014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 109 - 223
Target Start/End: Complemental strand, 26677237 - 26677122
Alignment:
Q  109 ttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaa-taattttaagtgt-tttgtcgtgtattggtgcatttttcat 206  Q
    ||||| ||| ||||||||| |||||||||||| ||||||||||||||| ||||||||| |  ||||||||||  ||||    ||||||||||||   |||    
T  26677237 tttttcgtttatttcacacatattaagaaaaa-tgtataagtgaaagagagagaaaaatttgttttaagtgtcattgtaaaatattggtgcattcaccat 26677139  T
Q  207 tatcataaatgcaaagt 223  Q
    |||||||||||||||||    
T  26677138 tatcataaatgcaaagt 26677122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 223
Target Start/End: Original strand, 40077705 - 40077808
Alignment:
Q  120 tttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatcataaatgc 218  Q
    |||||| | |||||||||||  ||||||| ||||||| ||| |||||| ||||| ||||| ||||||  ||||||||||||| ||| ||||||||||||     
T  40077705 tttcactcatattaagaaaag-tgtataaatgaaagagagaaaaaaatgattttgagtgtctttgtcaagtattggtgcattcttctttatcataaatgt 40077803  T
Q  219 aaagt 223  Q
    |||||    
T  40077804 aaagt 40077808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 224
Target Start/End: Original strand, 10728863 - 10728981
Alignment:
Q  109 ttttttgttcatttcacactta-ttaagaaaaaatgtataagtgaaagaaag--agaaaaataattttaagtgttttgtcgtgtattggtgcatttttca 205  Q
    |||||| ||| |||||||| || |||||||||| ||||||||||||||| ||  | ||||||| |||| ||||| ||||   ||||| ||||||| ||      
T  10728863 tttttttttcttttcacacataattaagaaaaagtgtataagtgaaagagagaaaaaaaaatagttttgagtgtcttgttaagtatttgtgcattctttc 10728962  T
Q  206 ttatcataaatgcaaagtg 224  Q
    |||||||||||||||||||    
T  10728963 ttatcataaatgcaaagtg 10728981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 168
Target Start/End: Original strand, 14748655 - 14748706
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaata 168  Q
    |||||| ||||||||||||||||| ||||||||||||||| ||||| |||||    
T  14748655 tcattttacacttattaagaaaaagtgtataagtgaaagagagagagaaata 14748706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 39998318 - 39998212
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    |||||||| || ||||||||||| | |||||| ||||||| |||||||||| ||||||||||| ||| ||  ||||| | ||||| ||| ||||||||||    
T  39998318 tcatttcatacatattaagaaaaga-gtataaatgaaagagagagaaaaatgattttaagtgtctttatcaagtatttgagcattcttctttatcataaa 39998220  T
Q  216 tgcaaagt 223  Q
    || |||||    
T  39998219 tgtaaagt 39998212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 8394204 - 8394313
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataag--tgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcata 213  Q
    |||||||||||||||||||||||| ||||||||  | | |||||||||||||| | ||||| || | || ||   |||||||||||| ||| ||||||||    
T  8394204 tcatttcacacttattaagaaaaagtgtataagtataagagaaagagaaaaatgagtttaaatgctcttatcaactattggtgcattattctttatcata 8394303  T
Q  214 aatgcaaagt 223  Q
    ||| ||||||    
T  8394304 aatacaaagt 8394313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 167
Target Start/End: Original strand, 8566065 - 8566115
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaat 167  Q
    |||||||||||||||||||||||  |||||||||||||||  |||||||||    
T  8566065 tcatttcacacttattaagaaaacgtgtataagtgaaagagggagaaaaat 8566115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 175
Target Start/End: Complemental strand, 29615953 - 29615896
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaa 175  Q
    ||||||||||| |||||||||||| ||||||| |||| || ||||||||||||||||||    
T  29615953 tcatttcacacgtattaagaaaaa-tgtataaatgaaggagagagaaaaataattttaa 29615896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 224
Target Start/End: Original strand, 31410558 - 31410667
Alignment:
Q  115 gttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtttt-gtcgtgtattggtgcatttttcattatcata 213  Q
    ||||||||||||| |||||||||||| |  |||| |||| || ||||||||| | ||||||||||||| ||    |||||||||||| | || |||||||    
T  31410558 gttcatttcacacatattaagaaaaatta-ataaatgaaggagagagaaaaacagttttaagtgtttttgttaaatattggtgcattatacactatcata 31410656  T
Q  214 aatgcaaagtg 224  Q
    |||||||||||    
T  31410657 aatgcaaagtg 31410667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 221
Target Start/End: Original strand, 36649664 - 36649772
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtt-ttgtcgtgtattggtgcatttttcattatc 210  Q
    ||||||||||| |||||||||||| ||||||||| |||||||||| |||| ||| || ||||||||||| || ||   ||||||  |||||| |||||||    
T  36649664 tttgttcattttacacttattaag-aaaaatgtaaaagtgaaagagagag-aaattagttttaagtgttcttatcaaatattggaccattttccattatc 36649761  T
Q  211 ataaatgcaaa 221  Q
    |||||| ||||    
T  36649762 ataaatacaaa 36649772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 37703152 - 37703083
Alignment:
Q  107 agttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagt 177  Q
    |||| |||| ||||||||||| |||||||||||| |||||||| |||| | |||||||||| |||||||||    
T  37703152 agttatttgatcatttcacacatattaagaaaaa-tgtataagcgaaaaagagagaaaaatgattttaagt 37703083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 224
Target Start/End: Original strand, 44790372 - 44790481
Alignment:
Q  115 gttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcata 213  Q
    ||||||||||||| |||||||| ||| ||||||| |||| || ||||||||||| |||||||||   ||||   ||||||||||||| | || |||||||    
T  44790372 gttcatttcacacgtattaagacaaa-tgtataaatgaaggagagagaaaaatagttttaagtgcacttgttaagtattggtgcattctccactatcata 44790470  T
Q  214 aatgcaaagtg 224  Q
    |||| ||||||    
T  44790471 aatgtaaagtg 44790481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 12957916 - 12957993
Alignment:
Q  101 taacggagttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg 178  Q
    |||| ||||| |||||||||||||||| |||||| ||||||||||||| ||   |||| ||||||||  |||||||||    
T  12957916 taaccgagttatttgttcatttcacacatattaaaaaaaaatgtataaatgttggaaatagaaaaatggttttaagtg 12957993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 223
Target Start/End: Original strand, 27875088 - 27875200
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtt-ttgtcgtgtattggtgcatttttcattat 209  Q
    |||||||||||||||| ||||||| ||||||||||| ||||||  |  |||||||||  |||||| |||| |||||  |||||| | |||||   |||||    
T  27875088 ttttgttcatttcacatttattaa-aaaaaatgtattagtgaagaatggagaaaaatggttttaaatgttcttgtcaagtattgatccatttactattat 27875186  T
Q  210 cataaatgcaaagt 223  Q
    ||||||||||||||    
T  27875187 cataaatgcaaagt 27875200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 161
Target Start/End: Original strand, 886399 - 886443
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagag 161  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||    
T  886399 tcatttcacacttattaagaaaaagtgtacaagtgaaagagagag 886443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 224
Target Start/End: Original strand, 4480417 - 4480528
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattatca 211  Q
    |||| |||||| |||  ||||||||||| |||||||| ||||||| ||||||||||| ||| ||   ||||||  |||||||||||||| | || |||||    
T  4480417 tttgctcatttaacatatattaagaaaa-atgtataaatgaaagagagagaaaaatattttaaatacttttgttatgtattggtgcattctccagtatca 4480515  T
Q  212 taaatgcaaagtg 224  Q
    ||||  |||||||    
T  4480516 taaacacaaagtg 4480528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 224
Target Start/End: Original strand, 5423108 - 5423223
Alignment:
Q  110 tttttgttcatttc-acacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcatt 207  Q
    ||||| |||||||| |||| |||||||| ||| || |||||||||||| |||||||||| ||||| |||||  |||||  | ||||||| ||||  ||||    
T  5423108 ttttttttcatttccacacatattaagataaa-tgcataagtgaaagagagagaaaaatgattttgagtgtccttgtcaagcattggtgtatttaccatt 5423206  T
Q  208 atcataaatgcaaagtg 224  Q
    ||||||||| |||||||    
T  5423207 atcataaatacaaagtg 5423223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 224
Target Start/End: Complemental strand, 2119831 - 2119764
Alignment:
Q  158 agagaaaaataattttaagtgttt-tgtcgtgtattggtgcatttttcattatcataaatgcaaagtg 224  Q
    |||||||||||||||||||||||  |||  | ||||||| |||| |||||||||||||||| ||||||    
T  2119831 agagaaaaataattttaagtgttcctgttatatattggtacattcttcattatcataaatgtaaagtg 2119764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 156
Target Start/End: Complemental strand, 8840483 - 8840444
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaaga 156  Q
    ||||||||||| |||||||||||| |||||||||||||||    
T  8840483 tcatttcacacatattaagaaaaattgtataagtgaaaga 8840444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 223
Target Start/End: Complemental strand, 29451511 - 29451398
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaa---atgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcatt 207  Q
    ||||||||||||||||| ||||||||||||   |||||||| ||||||  ||||||||||| |||| |   |||||||  ||||| ||| ||| ||  ||    
T  29451511 ttttgttcatttcacacatattaagaaaaaatgatgtataaatgaaag--agagaaaaatagttttgaacattttgtcaagtattagtgtattctttctt 29451414  T
Q  208 atcataaatgcaaagt 223  Q
    ||||||||| ||||||    
T  29451413 atcataaatccaaagt 29451398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 223
Target Start/End: Complemental strand, 29638455 - 29638350
Alignment:
Q  118 catttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcataaat 216  Q
    ||||||||||  ||||||||||  ||||||| ||||||||||||||||||  |||| | ||  ||||||  |||||||| |||| ||| |||||||||||    
T  29638455 catttcacacagattaagaaaag-tgtataaatgaaagaaagagaaaaatggttttgaatgcctttgtcaagtattggttcattattctttatcataaat 29638357  T
Q  217 gcaaagt 223  Q
    | |||||    
T  29638356 gtaaagt 29638350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 201
Target Start/End: Original strand, 36011939 - 36012029
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcattt 201  Q
    ||||||||||||||||  | |||||||||  ||||||||||||||| | ||| ||||  |||| ||||| |||||  |||||| |||||||    
T  36011939 ttttgttcatttcacatatgttaagaaaatgtgtataagtgaaagagaaagagaaatggttttgagtgtcttgtcaagtattgatgcattt 36012029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 155
Target Start/End: Complemental strand, 36610958 - 36610912
Alignment:
Q  109 ttttttgttcatttcacacttattaagaaaaaatgtataagtgaaag 155  Q
    ||||||||| ||||||||| || |||||||||| |||||||||||||    
T  36610958 ttttttgtttatttcacacataataagaaaaaacgtataagtgaaag 36610912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 12653842 - 12653782
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg 178  Q
    ||||||||||| |||||||||||| ||||||| ||||  | ||||||||||| |||||||||    
T  12653842 tcatttcacacgtattaagaaaaa-tgtataaatgaagtagagagaaaaatagttttaagtg 12653782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 25174536 - 25174597
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg 178  Q
    |||||||| | ||||||||||||||||||||||| ||||| ||| || ||| ||||| ||||    
T  25174536 tcatttcatatttattaagaaaaaatgtataagtaaaagagagaaaagaatgattttgagtg 25174597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 29730841 - 29730954
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaa-tgtataagtgaaagaaagagaaaaataattttaagtgtt-ttgtcgtgtattggtgcatttttcattat 209  Q
    |||| |||||| |||  ||||||||||||| | ||||| |||| || |||||||| |  ||||||||||| ||||   ||||||||||||| | || |||    
T  29730841 tttgctcattttacatgtattaagaaaaaaatatataaatgaaggagagagaaaagtggttttaagtgttcttgttaagtattggtgcattctccactat 29730940  T
Q  210 cataaatgcaaagt 223  Q
    ||||||||||||||    
T  29730941 cataaatgcaaagt 29730954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 1186033 - 1185989
Alignment:
Q  136 aaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtt 180  Q
    |||||||||| |||||||||| | |||||||| ||||||||||||    
T  1186033 aaaaaatgtacaagtgaaagagatagaaaaattattttaagtgtt 1185989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 222
Target Start/End: Complemental strand, 14401128 - 14401041
Alignment:
Q  134 agaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattatcataaatgcaaag 222  Q
    ||||||||| ||||||||||||| |||||||||| | ||| | ||| |||| | ||||||||  |||| || ||||| |||||||||||    
T  14401128 agaaaaaatatataagtgaaagagagagaaaaatga-tttgattgtcttgttgagtattggtttatttctcgttatcttaaatgcaaag 14401041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 37219712 - 37219775
Alignment:
Q  116 ttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtt 180  Q
    |||||||||||| |||||||| ||| ||||||| |||| || ||||||| || ||||||||||||    
T  37219712 ttcatttcacacatattaagacaaa-tgtataaatgaaggagagagaaatatgattttaagtgtt 37219775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 224
Target Start/End: Complemental strand, 39171700 - 39171591
Alignment:
Q  114 tgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcat 212  Q
    |||||||||||||| ||||||  |||||| ||||| |||| || ||||||||||  ||||||||  ||||||   |||||| |||||| |  | ||||||    
T  39171700 tgttcatttcacacctattaa--aaaaatatataaatgaaggagagagaaaaatggttttaagtacttttgttaagtattgatgcattatctactatcat 39171603  T
Q  213 aaatgcaaagtg 224  Q
    ||||||||||||    
T  39171602 aaatgcaaagtg 39171591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 41756286 - 41756314
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgta 145  Q
    |||||||||||||||||||||||||||||    
T  41756286 tcatttcacacttattaagaaaaaatgta 41756314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 8e-24; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 111 - 223
Target Start/End: Original strand, 12949910 - 12950022
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattatc 210  Q
    ||||||||||||||||  ||||| |||||||||||||||||||||| ||| |||||||||||| ||||| |||||  ||||||||| |||  |  |||||    
T  12949910 ttttgttcatttcacatatattacgaaaaaatgtataagtgaaagagagaaaaaaataattttgagtgtcttgtcaagtattggtgaattcctttttatc 12950009  T
Q  211 ataaatgcaaagt 223  Q
    |||||||||||||    
T  12950010 ataaatgcaaagt 12950022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 98 - 216
Target Start/End: Complemental strand, 19264691 - 19264573
Alignment:
Q  98 taataacggagttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgc 197  Q
    ||||||| ||||||||| ||||||||||| | |||||||||||||||||||||||   | | ||||||||| |||||||||| |||||   ||||  |||    
T  19264691 taataactgagttttttattcatttcacattcattaagaaaaaatgtataagtgatgaagaaagaaaaatagttttaagtgtcttgtcaaatattaatgc 19264592  T
Q  198 atttttcattatcataaat 216  Q
    |||||||||||||||||||    
T  19264591 atttttcattatcataaat 19264573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 101 - 185
Target Start/End: Complemental strand, 13026742 - 13026657
Alignment:
Q  101 taacggagttttttgttcatttcacacttattaagaaaaaat-gtataagtgaaagaaagagaaaaataattttaagtgttttgtc 185  Q
    |||| ||| ||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||| ||||| |||||    
T  13026742 taactgaggtttttgttcatttcacatttattaagaaaaaattgtataagtgaaagaaaaagaaaaataattttgagtgtcttgtc 13026657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 98 - 223
Target Start/End: Complemental strand, 19516053 - 19515930
Alignment:
Q  98 taataacggagttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgc 197  Q
    ||||||||||||  ||| ||||||| ||| ||||||| ||||||||||| |  |||||| ||||||||||| ||||| |||| |||||  |||||||| |    
T  19516053 taataacggagtcatttattcattttacatttattaa-aaaaaatgtatgaaggaaagagagagaaaaatagtttta-gtgtcttgtcaagtattggttc 19515956  T
Q  198 atttttcattatcataaatgcaaagt 223  Q
    ||||||||||||||||||||||||||    
T  19515955 atttttcattatcataaatgcaaagt 19515930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 43950400 - 43950506
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||| || ||||||   |||||| || ||||| ||||| ||||||    
T  43950400 tcatttcacacttattaa-aaaaaatgtataagtgaaagagagagaaaaatagttttaaatgtttttgttaagtattgatgtattttccattaacataaa 43950498  T
Q  216 tgcaaagt 223  Q
    ||||||||    
T  43950499 tgcaaagt 43950506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 6213791 - 6213908
Alignment:
Q  106 gagttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtt-ttgtcgtgtattggtgcatttttc 204  Q
    |||| ||||| |||||||||||||||||||||||| || || |||||| ||||||||||||| |||||||||||| | |||  |||||| | |||||  |    
T  6213791 gagtcttttgctcatttcacacttattaagaaaaa-tgaattagtgaatgaaagagaaaaatgattttaagtgttctcgtcaagtattgcttcatttacc 6213889  T
Q  205 attatcataaatgcaaagt 223  Q
    |||||||||||||||||||    
T  6213890 attatcataaatgcaaagt 6213908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 10069526 - 10069643
Alignment:
Q  106 gagttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagt-gttttgtcgtgtattggtgcatttttc 204  Q
    |||| ||||| |||||||||||| ||||||||||| | ||||||||||||| ||| |||||| |||||||||  |||||||  ||||| ||||||||  |    
T  10069526 gagtcttttgctcatttcacactcattaagaaaaa-tatataagtgaaagagagataaaaatgattttaagtacttttgtcaagtatttgtgcatttacc 10069624  T
Q  205 attatcataaatgcaaagt 223  Q
    |||||||||||||||||||    
T  10069625 attatcataaatgcaaagt 10069643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 2882129 - 2882031
Alignment:
Q  129 tattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcataaatgcaaagtgaa 226  Q
    |||||||||||||||||||| ||||||| | |||||||| |||||||||| | ||||   ||||||||||||| | || ||||||||||||||||||||    
T  2882129 tattaagaaaaaatgtataaatgaaagagatagaaaaatgattttaagtgctcttgttaagtattggtgcattctccactatcataaatgcaaagtgaa 2882031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 165
Target Start/End: Original strand, 6972492 - 6972540
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaa 165  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6972492 tcatttcacacttattaagaaaaaatgtataagtgaaagagagagaaaa 6972540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 13222222 - 13222174
Alignment:
Q  119 atttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaat 167  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13222222 atttcacacttattaagaaaaaatgtataagtgaaagagagagaaaaat 13222174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 8550613 - 8550700
Alignment:
Q  137 aaaaatgtataagtgaaagaaagagaaaaataattttaagtgtt-ttgtcgtgtattggtgcatttttcattatcataaatgcaaagt 223  Q
    |||||||||||||||||||| |||||||| |  ||||||||||| |||||  ||||| ||||||| | ||||||||||||||||||||    
T  8550613 aaaaatgtataagtgaaagagagagaaaagtggttttaagtgttcttgtcaagtatttgtgcattctccattatcataaatgcaaagt 8550700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 132 - 223
Target Start/End: Complemental strand, 40710717 - 40710626
Alignment:
Q  132 taagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattatcataaatgcaaagt 223  Q
    ||||||||||| ||||||||||| | ||||||||||| |||| |||||||||||   |||| ||||||| ||| |||||||| |||||||||    
T  40710717 taagaaaaaatctataagtgaaaaagagagaaaaatagttttgagtgttttgtcaaatattcgtgcattcttccttatcatacatgcaaagt 40710626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 5426020 - 5425911
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaa--agaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcatta 208  Q
    ||||||||||||||||| |||||||||||| ||||||||||||  ||| |||||| |||| |||| ||||| |||||  ||||||||| |||| ||  |     
T  5426020 ttttgttcatttcacacgtattaagaaaaagtgtataagtgaaagagagagagaataatagttttgagtgtattgtcaagtattggtgtatttctccctg 5425921  T
Q  209 tcataaatgc 218  Q
    ||||||||||    
T  5425920 tcataaatgc 5425911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 217
Target Start/End: Complemental strand, 8385236 - 8385130
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattatc 210  Q
    ||||||||||||||| | |||||||||||||||||||| |||||   ||| ||||||  |||| ||||| |||||  |||||| | ||||| ||||||||    
T  8385236 ttttgttcatttcacgcgtattaagaaaaaatgtataaatgaaaagtagaaaaaaattgttttgagtgtcttgtcaagtattgtttcatttctcattatc 8385137  T
Q  211 ataaatg 217  Q
    |||||||    
T  8385136 ataaatg 8385130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 114 - 221
Target Start/End: Complemental strand, 3123804 - 3123697
Alignment:
Q  114 tgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcat 212  Q
    |||||||||||||| |||||||||||| ||||||| ||||  | ||||||||||||||||||||| |||  |   ||||||||||||| |||| ||||||    
T  3123804 tgttcatttcacacatattaagaaaaa-tgtataactgaagtagagagaaaaataattttaagtgctttcattaagtattggtgcattcttcactatcat 3123706  T
Q  213 aaatgcaaa 221  Q
    |||| ||||    
T  3123705 aaatacaaa 3123697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 120 - 223
Target Start/End: Original strand, 18181168 - 18181271
Alignment:
Q  120 tttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcataaatgc 218  Q
    ||||||||  ||||||||||  ||||||||||| ||| ||||||||||  ||||||||| ||||||  |||||||||||||| | || ||||||||||||    
T  18181168 tttcacacagattaagaaaag-tgtataagtgagagagagagaaaaatggttttaagtgcttttgttatgtattggtgcattctccactatcataaatgc 18181266  T
Q  219 aaagt 223  Q
    |||||    
T  18181267 aaagt 18181271  T

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Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 120 - 223
Target Start/End: Complemental strand, 31592703 - 31592599
Alignment:
Q  120 tttcacacttattaagaaaaaa-tgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattatcataaatgc 218  Q
    |||||||| |||||| |||||| ||||||||||||||| ||||||||||| |||  ||||| |||||  |||||| |||||| ||  ||||||||||| |    
T  31592703 tttcacacatattaataaaaaagtgtataagtgaaagagagagaaaaatagtttcgagtgtcttgtcaagtattgctgcattctttcttatcataaatac 31592604  T
Q  219 aaagt 223  Q
    |||||    
T  31592603 aaagt 31592599  T

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Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 314583 - 314476
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    |||||||||||||||||||||||| ||||||||||||||| |||| |||||  |||| ||||   || ||   ||||| |||||| ||| ||||||||||    
T  314583 tcatttcacacttattaagaaaaagtgtataagtgaaagagagaggaaaatggttttgagtgcccttatcaactattgatgcattcttctttatcataaa 314484  T
Q  216 tgcaaagt 223  Q
    ||||||||    
T  314483 tgcaaagt 314476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 2048447 - 2048341
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||  || | |||| | || ||   |||||||||||| ||  ||||||||||    
T  2048447 tcatttcacacttattaa-aaaaaatgtataagtgaaagagagagaaaaatggttatgagtgctcttatcaactattggtgcattcttgtttatcataaa 2048349  T
Q  216 tgcaaagt 223  Q
    ||||||||    
T  2048348 tgcaaagt 2048341  T

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Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 2756829 - 2756723
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    |||||||||||||||||||| ||||||||| | ||||  | |||||||||| |||||||||| | |||||  ||||| ||||||||  ||||||||||||    
T  2756829 tcatttcacacttattaaga-aaaatgtattaatgaagaagagagaaaaattattttaagtgctcttgtcaagtattagtgcatttaccattatcataaa 2756731  T
Q  216 tgcaaagt 223  Q
    || |||||    
T  2756730 tgtaaagt 2756723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 9725033 - 9724927
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    ||||||||||| |||||||||||  ||||||| ||||||| ||||| |||| ||||| |||| |||| ||  ||||||||||||| ||| ||||||||||    
T  9725033 tcatttcacacatattaagaaaag-tgtataaatgaaagagagagagaaatgattttgagtgcttttatcaagtattggtgcattcttctttatcataaa 9724935  T
Q  216 tgcaaagt 223  Q
    || |||||    
T  9724934 tgtaaagt 9724927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 111 - 167
Target Start/End: Original strand, 14384057 - 14384113
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaat 167  Q
    |||||||||||||| || |||||||||||||| ||||| ||||||| ||||||||||    
T  14384057 ttttgttcatttcatacatattaagaaaaaatatataaatgaaagagagagaaaaat 14384113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 37529018 - 37529129
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatc 210  Q
    ||||||||||||||||||||||| ||||||| ||| ||| || || ||||||||||  |||| ||||| |||||   ||||||||  ||||||| |||||    
T  37529018 tttgttcatttcacacttattaa-aaaaaatatattagtaaaggatagagaaaaatggttttgagtgtctttgttaagtattggtctatttttctttatc 37529116  T
Q  211 ataaatgcaaagt 223  Q
    ||||||| |||||    
T  37529117 ataaatgtaaagt 37529129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 117 - 224
Target Start/End: Complemental strand, 41436233 - 41436127
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtttt-gtcgtgtattggtgcatttttcattatcataaa 215  Q
    ||||||||||| |||||||||||| ||||||| ||||  | |||||||| |||||||||||||||| ||   |||||| || ||| |||| |||||||||    
T  41436233 tcatttcacacatattaagaaaaa-tgtataaatgaattagagagaaaa-taattttaagtgtttttgttaagtattgatgtattcttcactatcataaa 41436136  T
Q  216 tgcaaagtg 224  Q
    |||||||||    
T  41436135 tgcaaagtg 41436127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 156
Target Start/End: Original strand, 928490 - 928529
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaaga 156  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  928490 tcatttcacacttattaagaaaaaacgtataagtgaaaga 928529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 184
Target Start/End: Complemental strand, 6075640 - 6075565
Alignment:
Q  109 ttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgt 184  Q
    |||||| ||| |||||||| |||||| ||||||||| ||||||||||| | ||||||||| |||| ||||| ||||    
T  6075640 tttttttttcttttcacacatattaaaaaaaaatgtctaagtgaaagagaaagaaaaatagttttgagtgtcttgt 6075565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 25604490 - 25604412
Alignment:
Q  142 tgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattatcataaatgcaaa 221  Q
    ||||||||||||||| ||||||||||| |||| ||||| ||||   ||||||||||||| ||  ||||||||||||||||    
T  25604490 tgtataagtgaaagagagagaaaaatagttttgagtgtcttgt-aagtattggtgcattctttcttatcataaatgcaaa 25604412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 223
Target Start/End: Original strand, 29937849 - 29937972
Alignment:
Q  100 ataacggagttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcat 199  Q
    |||||||||| ||||||||||||||||| |||| | |||| |||||||||| ||| | ||| ||||||| |||| ||| | | ||   ||||| ||||||    
T  29937849 ataacggagtattttgttcatttcacacgtatttaaaaaatatgtataagtaaaaaagagaaaaaaatagttttgagtatctagttaagtattagtgcat 29937948  T
Q  200 ttttcattatcataaatgcaaagt 223  Q
    || |  ||||||||||| ||||||    
T  29937949 ttcttcttatcataaatacaaagt 29937972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 435028 - 435090
Alignment:
Q  117 tcatttcacacttattaagaaaaa-atgtataagtgaaagaaagagaaaaataattttaagtg 178  Q
    ||||||||||| |||||||||||| |||||||| ||||||| ||| ||||||| |||||||||    
T  435028 tcatttcacacgtattaagaaaaatatgtataaatgaaagagagacaaaaatagttttaagtg 435090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 733957 - 734019
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataatttt 173  Q
    |||||||||||| |||| ||||| || ||||||||||| ||||||| |||||||||| |||||    
T  733957 ttttgttcattttacacgtattacgataaaatgtataaatgaaagagagagaaaaatgatttt 734019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 226
Target Start/End: Complemental strand, 23685114 - 23685005
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtttt-gtcgtgtattggtgcatttttcattatcataaa 215  Q
    ||||||||| | |||||||||||| ||||||| | || || |||||||| || ||||||||||||| ||   ||||| ||||||| | || |||||||||    
T  23685114 tcatttcacgcatattaagaaaaa-tgtataaataaaggagagagaaaattagttttaagtgtttttgttaagtattagtgcattctccactatcataaa 23685016  T
Q  216 tgcaaagtgaa 226  Q
    |||||||||||    
T  23685015 tgcaaagtgaa 23685005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 223
Target Start/End: Original strand, 44424240 - 44424321
Alignment:
Q  141 atgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattatcataaatgcaaagt 223  Q
    |||||||||||||||| |||||||| |  |||| | ||| |||||  |||||| ||||||||| |||||||||||||||||||    
T  44424240 atgtataagtgaaagagagagaaaa-tggttttgaatgtcttgtcaagtattgatgcattttttattatcataaatgcaaagt 44424321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 13375140 - 13375200
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg 178  Q
    ||||||||||| ||||||||||| |||||||| |||| || ||||| |||||||||||||||    
T  13375140 tcatttcacacgtattaagaaaa-atgtataaatgaaggagagagataaataattttaagtg 13375200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 28108327 - 28108387
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg 178  Q
    ||||||||||| |||||||||||||| ||||| |||| || ||||||||||| |||||||||    
T  28108327 tcatttcacacgtattaagaaaaaat-tataaatgaaggagagagaaaaatagttttaagtg 28108387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 40965169 - 40965109
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg 178  Q
    ||||||||||| |||||||||||| ||||||| |||| || ||||||||||| |||||||||    
T  40965169 tcatttcacacgtattaagaaaaa-tgtataaatgaaggagagagaaaaatagttttaagtg 40965109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 156
Target Start/End: Complemental strand, 44024869 - 44024824
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaaga 156  Q
    ||||||||| ||||||| |||||||||||||| |||||||||||||    
T  44024869 ttttgttcacttcacacgtattaagaaaaaatctataagtgaaaga 44024824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 224
Target Start/End: Complemental strand, 565225 - 565137
Alignment:
Q  137 aaaaatgtataagtgaaagaaagagaaaaataattttaagtgtt-ttgtcgtgtattggtgcatttttcattatcataaatgcaaagtg 224  Q
    |||||||||||  |||| || | |||||||| |||||||||||| ||||   ||||||||||||| | || ||||||||||||||||||    
T  565225 aaaaatgtatatatgaaggagaaagaaaaatgattttaagtgttcttgttaagtattggtgcattctccactatcataaatgcaaagtg 565137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 173
Target Start/End: Complemental strand, 19010015 - 19009951
Alignment:
Q  109 ttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataatttt 173  Q
    |||||| |||| ||||||| |||||||||||||||||||| | ||| | | ||||||||||||||    
T  19010015 ttttttattcaattcacacatattaagaaaaaatgtataaattaaaaagaaagaaaaataatttt 19009951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 240
Target Start/End: Original strand, 20027090 - 20027225
Alignment:
Q  106 gagttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataatttt-aagtgtttt-gtcgtgtattggtgcattttt 203  Q
    ||||| |||| |||||||| || |||||||||||  | |||||| ||| || ||||||||||| |||| ||||||||| |||  |||||| ||||||       
T  20027090 gagttatttgctcatttcagacatattaagaaaag-tatataagcgaatgagagagaaaaatagtttttaagtgtttttgtcaagtattgctgcattcac 20027188  T
Q  204 cattatcataaatgcaaagtgaagggtgttgaattgg 240  Q
    ||||||||||||| ||||||| ||| | |||||||||    
T  20027189 cattatcataaatacaaagtggaggatattgaattgg 20027225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 226
Target Start/End: Original strand, 43077676 - 43077787
Alignment:
Q  115 gttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatcata 213  Q
    ||||||||||||| |||||||| ||| ||||||| |||| || ||||||||||| |||||| |||  ||||    |||||||||||||| || | |||||    
T  43077676 gttcatttcacacgtattaagacaaa-tgtataaatgaatgagagagaaaaatagttttaaatgtacttgttaactattggtgcattttccactgtcata 43077774  T
Q  214 aatgcaaagtgaa 226  Q
    |||| ||||||||    
T  43077775 aatgtaaagtgaa 43077787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 217
Target Start/End: Complemental strand, 43182426 - 43182327
Alignment:
Q  118 catttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatcataaat 216  Q
    ||||||||||  ||||||||||| |||||||  |||||| ||| |||||||||||| ||||| ||||||   |||||||||||| ||| |||| ||||||    
T  43182426 catttcacacagattaagaaaaa-tgtataaaggaaagagagaaaaaaataattttgagtgtctttgtcaaatattggtgcattcttctttattataaat 43182328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 4794684 - 4794621
Alignment:
Q  162 aaaaataattttaagtgtt-ttgtcgtgtattggtgcatttttcattatcataaatgcaaagtg 224  Q
    |||||||||||| |||||| |||||   ||||| ||||||||| ||||||||||||||||||||    
T  4794684 aaaaataattttgagtgttcttgtcaaatattgatgcattttttattatcataaatgcaaagtg 4794621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 112 - 182
Target Start/End: Original strand, 10394232 - 10394299
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtttt 182  Q
    ||||||||||||||||  |||||||||| ||||||||  ||| || |||||||||||||||||| ||||||    
T  10394232 tttgttcatttcacac--attaagaaaa-atgtataaaagaaggagagagaaaaataattttaaatgtttt 10394299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 112 - 175
Target Start/End: Original strand, 45464162 - 45464224
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaa 175  Q
    |||| ||||||||||| ||||||||||| ||||||||||||| || ||| |||||| |||||||    
T  45464162 tttgctcatttcacacatattaagaaaa-atgtataagtgaatgagagaaaaaaatgattttaa 45464224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 226
Target Start/End: Original strand, 24775779 - 24775869
Alignment:
Q  137 aaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcataaatgcaaagtgaa 226  Q
    |||||||||||| |||| || |||||||||||||||||||||   ||||   ||||||||| ||| | || ||||||||||| ||||||||    
T  24775779 aaaaatgtataaatgaaggagagagaaaaataattttaagtgcacttgttaagtattggtgtattctccactatcataaatgtaaagtgaa 24775869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 177
Target Start/End: Complemental strand, 32556330 - 32556268
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagt 177  Q
    |||||||||||||||| ||||||| |||| ||||||||||||||  ||||||||||  ||||||||    
T  32556330 tttgttcatttcacacatattaag-aaaagtgtataagtgaaag--agagaaaaatggttttaagt 32556268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 156
Target Start/End: Original strand, 38872862 - 38872912
Alignment:
Q  106 gagttttttgttcatttcacacttattaagaaaaaatgtataagtgaaaga 156  Q
    |||||||||| |||||||| ||||||||||||||| |||| ||||| ||||    
T  38872862 gagttttttgctcatttcatacttattaagaaaaagtgtaaaagtggaaga 38872912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 44737026 - 44736961
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg 178  Q
    |||| ||||||||||| |||||||||||| ||||||||| || || ||| |||||| ||||||||||    
T  44737026 tttgctcatttcacacatattaagaaaaa-tgtataagttaatgagagataaaaatgattttaagtg 44736961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 9937135 - 9937070
Alignment:
Q  156 aaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattatcataaatgcaaa 221  Q
    |||||| |||||| |||| ||||| |||||   ||||| ||||||| |||||||||||||||||||    
T  9937135 aaagagtaaaatagttttgagtgtcttgtcaaatattgttgcatttctcattatcataaatgcaaa 9937070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 28925800 - 28925860
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg 178  Q
    ||||||||||| ||||||||||| |||||||| | || || ||||||||||| |||||||||    
T  28925800 tcatttcacacgtattaagaaaa-atgtataaataaaggagagagaaaaatagttttaagtg 28925860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 3200049 - 3200001
Alignment:
Q  119 atttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaat 167  Q
    |||||| | |||||||||||| |||||||| ||||||| ||||||||||    
T  3200049 atttcatatttattaagaaaagatgtataaatgaaagagagagaaaaat 3200001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 28301568 - 28301480
Alignment:
Q  139 aaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcataaatgcaaagtgaa 226  Q
    |||||||||| |||| |||||||||||||  ||||||||| | ||||   ||||||||  ||| | || ||||||||||||||||||||    
T  28301568 aaatgtataaatgaaggaaagagaaaaatggttttaagtgctcttgttaagtattggtctattctccactatcataaatgcaaagtgaa 28301480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 178
Target Start/End: Complemental strand, 36155664 - 36155608
Alignment:
Q  122 tcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg 178  Q
    |||||| |||||||| ||||||||||| |||| || ||| |||||| ||||||||||    
T  36155664 tcacacatattaagataaaatgtataaatgaaggagagaaaaaaatgattttaagtg 36155608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 39159779 - 39159714
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg 178  Q
    ||||| |||||||||||||||||   |||||||||  ||||| ||| |||||||||| ||||||||||    
T  39159779 ttttgctcatttcacacttatta--gaaaaatgtaatagtgatagagagagaaaaatgattttaagtg 39159714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 39209415 - 39209480
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg 178  Q
    ||||| |||||||||||||||||   |||||||||  ||||| ||| |||||||||| ||||||||||    
T  39209415 ttttgctcatttcacacttatta--gaaaaatgtaatagtgatagagagagaaaaatgattttaagtg 39209480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 5e-22; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 119 - 220
Target Start/End: Complemental strand, 4486019 - 4485918
Alignment:
Q  119 atttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattatcataaatgc 218  Q
    ||||||||  |||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||   ||||  | |||||| |||||||||||||||    
T  4486019 atttcacaaatattaagaaaaaatatataagtgaaagaaagagaaaaatagttttgagtgttttgtcaaatattaattcattttccattatcataaatgc 4485920  T
Q  219 aa 220  Q
    ||    
T  4485919 aa 4485918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 115 - 226
Target Start/End: Original strand, 35909523 - 35909634
Alignment:
Q  115 gttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatcata 213  Q
    ||||||||||||| ||||||||||| |||||||| |||| |||||| |||||||||||||||||| |||||   ||||||||||||||| || ||| |||    
T  35909523 gttcatttcacacgtattaagaaaa-atgtataaatgaatgaaagataaaaataattttaagtgtatttgttaagtattggtgcattttccactattata 35909621  T
Q  214 aatgcaaagtgaa 226  Q
    |||| ||||||||    
T  35909622 aatgtaaagtgaa 35909634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 101 - 223
Target Start/End: Original strand, 35027433 - 35027555
Alignment:
Q  101 taacggagttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatt 200  Q
    |||| |||| ||||||| ||||||||| |||||| ||||| ||||||| ||||| |  ||||||||||||||||| ||| |||||   ||||||||||||    
T  35027433 taactgagtattttgtttatttcacacatattaaaaaaaagtgtataattgaaaaagggagaaaaataattttaaatgtcttgtcaaatattggtgcatt 35027532  T
Q  201 tttcattatcataaatgcaaagt 223  Q
    | | ||||||||||| |||||||    
T  35027533 tattattatcataaacgcaaagt 35027555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 112 - 224
Target Start/End: Original strand, 4360355 - 4360467
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatc 210  Q
    |||||||||||||||| ||||||||||||| |||||| |||| |||||||||||||  ||||||||| ||||||   ||||||||||||| | || || |    
T  4360355 tttgttcatttcacacatattaagaaaaaa-gtataaatgaatgaaagagaaaaatggttttaagtgcttttgttaagtattggtgcattctccactagc 4360453  T
Q  211 ataaatgcaaagtg 224  Q
    ||||||||||||||    
T  4360454 ataaatgcaaagtg 4360467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 221
Target Start/End: Original strand, 18872600 - 18872708
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattatc 210  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||| || ||||||||   || ||||| || ||  |||||| ||||||| || |||||    
T  18872600 ttttgttcatttcacacgtattaagaaaaagtgtataagtgaaagagagcgaaaaata--gttgagtgtcttatcaagtattgatgcatttctccttatc 18872697  T
Q  211 ataaatgcaaa 221  Q
    |||||||||||    
T  18872698 ataaatgcaaa 18872708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 20964239 - 20964346
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| | |||  |||| ||| ||   |||||||||||| ||| ||||| ||||    
T  20964239 tcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgagtttgcgtgtctttatcaactattggtgcattcttctttatcgtaaa 20964338  T
Q  216 tgcaaagt 223  Q
    ||||||||    
T  20964339 tgcaaagt 20964346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 112 - 224
Target Start/End: Original strand, 22872333 - 22872447
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtt---ttgtcgtgtattggtgcatttttcatta 208  Q
    |||| ||||||||||| |||||||||||| ||||||||||||  | ||||||||||  ||||||||| |   |||||  ||||||||||||| | |||||    
T  22872333 tttgctcatttcacacatattaagaaaaa-tgtataagtgaagaagagagaaaaatggttttaagtgctcgtttgtcaagtattggtgcattctccatta 22872431  T
Q  209 tcataaatgcaaagtg 224  Q
    ||||||||||||||||    
T  22872432 tcataaatgcaaagtg 22872447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 1920890 - 1920823
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt 179  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||| |||||    
T  1920890 ttttattcatttcacacatattaagaaaaaatgtataagtgaaagaaaga-aaaaatgatttttagtgt 1920823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 185
Target Start/End: Original strand, 3502990 - 3503078
Alignment:
Q  98 taataacggagttttttgttcatttcacacttattaagaaaa-aatgtataagtgaaagaaagagaaaaataattttaagtgttttgtc 185  Q
    ||||||| |||  |||| |||||||||||  ||||||||||| |||||||||||||||||||||||||||| ||||| |||| ||||||    
T  3502990 taataactgagcattttattcatttcacaaatattaagaaaaaaatgtataagtgaaagaaagagaaaaatgattttgagtgctttgtc 3503078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 223
Target Start/End: Complemental strand, 13530023 - 13529911
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattatc 210  Q
    |||| |||||||||||| ||||||||||||||||| ||| |||||| ||||||||||  |||| ||||| ||||    |||||||||||||| | ||||     
T  13530023 ttttattcatttcacacatattaagaaaaaatgtacaagcgaaagagagagaaaaatggttttgagtgtcttgtgaactattggtgcattttcccttatg 13529924  T
Q  211 ataaatgcaaagt 223  Q
    ||||||| |||||    
T  13529923 ataaatgtaaagt 13529911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 10309199 - 10309269
Alignment:
Q  111 ttttgttcatttcacacttat--taagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt 179  Q
    ||||||||||||||||| |||  ||||||||| ||||||| | ||||||||||||||||||||||||||||    
T  10309199 ttttgttcatttcacacatataataagaaaaagtgtataaattaaagaaagagaaaaataattttaagtgt 10309269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 101 - 216
Target Start/End: Original strand, 29990406 - 29990523
Alignment:
Q  101 taacggagttttttgttcatttcacacttattaaga--aaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgca 198  Q
    ||||||||| ||||||||||||||||  ||||||||  |||||||||||||||||||| ||| |||||||  ||| ||||| |||||  |||||| ||||    
T  29990406 taacggagtcttttgttcatttcacatatattaagataaaaaatgtataagtgaaagagagaaaaaaatagatttgagtgtcttgtcaagtattgatgca 29990505  T
Q  199 tt-tttcattatcataaat 216  Q
    || ||||| ||||||||||    
T  29990506 ttctttca-tatcataaat 29990523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 101 - 164
Target Start/End: Complemental strand, 46958891 - 46958828
Alignment:
Q  101 taacggagttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaa 164  Q
    |||| |||| ||||||||||||||||| |||||||||||| ||||||||||||||| |||||||    
T  46958891 taactgagtattttgttcatttcacacatattaagaaaaagtgtataagtgaaagatagagaaa 46958828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 28330950 - 28330900
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaat 167  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  28330950 tcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaat 28330900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 42132971 - 42132921
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaat 167  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  42132971 tcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaat 42132921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 167
Target Start/End: Original strand, 49218734 - 49218784
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaat 167  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  49218734 tcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaat 49218784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 223
Target Start/End: Original strand, 52676976 - 52677089
Alignment:
Q  110 tttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcatta 208  Q
    |||||| |||||||| | ||||||||||||| ||||| |||||| ||||||||||||| |||||||||| | |||    |||||| ||||||| ||||||    
T  52676976 tttttgctcatttcatatttattaagaaaaa-tgtattagtgaatgaaagagaaaaatgattttaagtgctcttgataagtattgatgcatttatcatta 52677074  T
Q  209 tcataaatgcaaagt 223  Q
    ||||||||| |||||    
T  52677075 tcataaatgtaaagt 52677089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 43125956 - 43125887
Alignment:
Q  116 ttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtc 185  Q
    |||||||||||| |||||| ||||||||||||||  ||||| | |||||||||||||||| |||||||||    
T  43125956 ttcatttcacacatattaaaaaaaaatgtataagcaaaagagaaagaaaaataattttaaatgttttgtc 43125887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 111 - 223
Target Start/End: Original strand, 47277627 - 47277740
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattat 209  Q
    ||||| ||||||||||| |||||||||||||||||||||| ||||| ||| ||||||| |||| | ||   |||||  ||||| || |||||||| ||||    
T  47277627 ttttgctcatttcacacatattaagaaaaaatgtataagtaaaagatagataaaaatatttttcaatgcccttgtcaggtatttgtacatttttctttat 47277726  T
Q  210 cataaatgcaaagt 223  Q
    |||||||| |||||    
T  47277727 cataaatgtaaagt 47277740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 112 - 223
Target Start/End: Complemental strand, 49448999 - 49448890
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatc 210  Q
    |||||||||||||||  |||||||||||| |||||||||||| || ||||||||||  ||||||||| | |||||  ||||| ||||||| |  ||||||    
T  49448999 tttgttcatttcaca--tattaagaaaaa-tgtataagtgaaggagagagaaaaatggttttaagtgctcttgtcaagtatttgtgcattctctattatc 49448903  T
Q  211 ataaatgcaaagt 223  Q
    |||||||||||||    
T  49448902 ataaatgcaaagt 49448890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 5499378 - 5499446
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt 179  Q
    |||||||||||| |||| |||||||||||| ||||||||||||||| | ||||||||| |||| |||||    
T  5499378 ttttgttcatttgacacatattaagaaaaagtgtataagtgaaagagaaagaaaaatagttttgagtgt 5499446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 38838791 - 38838681
Alignment:
Q  106 gagttttttgttcatttcacacttat--taagaaaaaatgtataagtgaaaga--aagagaaaaataattttaagtgttttgtcgtgtattggtgcattt 201  Q
    |||| ||||| ||||||||||| |||  ||||||||| ||| |||||||||||  |||||||||||  |||||||||| |||||  ||||||||||||||    
T  38838791 gagtcttttgctcatttcacacatatattaagaaaaagtgtctaagtgaaagataaagagaaaaattgttttaagtgtgttgtcaagtattggtgcattt 38838692  T
Q  202 ttcattatcat 212  Q
     ||| ||||||    
T  38838691 ctcaatatcat 38838681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 120 - 223
Target Start/End: Complemental strand, 41436633 - 41436530
Alignment:
Q  120 tttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcataaatgc 218  Q
    |||||||| |||||||||||  ||||||||||| ||| ||| ||||||  ||||||||| ||||||  |||||||||||||| | || ||||||||||||    
T  41436633 tttcacacatattaagaaaag-tgtataagtgagagagagaaaaaaatggttttaagtgcttttgttatgtattggtgcattctccactatcataaatgc 41436535  T
Q  219 aaagt 223  Q
    |||||    
T  41436534 aaagt 41436530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 184
Target Start/End: Original strand, 3511925 - 3512012
Alignment:
Q  98 taataacggagttttttgttcatttcacacttattaagaaaaaatgt-ataagtgaaagaaagagaaaaataattttaagtgttttgt 184  Q
    ||||||| |||  ||||||||||||||||  |||||||||||||  | ||||||||||||||||| ||||| ||||| ||||||||||    
T  3511925 taataactgagcattttgttcatttcacaaatattaagaaaaaaaattataagtgaaagaaagaggaaaatgattttgagtgttttgt 3512012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 216
Target Start/End: Complemental strand, 25104310 - 25104200
Alignment:
Q  107 agttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaa-taattttaagtgttttg-tcgtgtattggtgcatttttc 204  Q
    |||| ||| |||||||||||| |||||| |||||| ||||||||||| |||||| ||||| | ||||||||||||||  ||  |||||| ||||||| ||    
T  25104310 agttatttattcatttcacacatattaataaaaaa-gtataagtgaatgaaagaaaaaaaatgattttaagtgtttttatctagtattgatgcatttatc 25104212  T
Q  205 attatcataaat 216  Q
    ||||||||||||    
T  25104211 attatcataaat 25104200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 224
Target Start/End: Original strand, 54729434 - 54729543
Alignment:
Q  119 atttcacacttattaagaaa---aaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcataa 214  Q
    ||||||||| ||||||||||   |||||||||| ||||||| ||||||||||| ||||||||| ||||||   ||||| ||| ||| | || ||||||||    
T  54729434 atttcacacatattaagaaagaaaaatgtataaatgaaagagagagaaaaatagttttaagtgtttttgttaagtattagtgtattctccactatcataa 54729533  T
Q  215 atgcaaagtg 224  Q
    ||||||||||    
T  54729534 atgcaaagtg 54729543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 167
Target Start/End: Complemental strand, 12619853 - 12619793
Alignment:
Q  106 gagttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaat 167  Q
    ||||| ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||||    
T  12619853 gagttatttgttcatttcatacttattaaga-aaaatgtataagtgaaagagcgagaaaaat 12619793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 224
Target Start/End: Complemental strand, 17237203 - 17237091
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatc 210  Q
    |||| ||||||||||| |||||||||||| | ||||| |||| || ||||||||||| ||||||||| ||||||   ||||| ||| ||| || | ||||    
T  17237203 tttgctcatttcacacctattaagaaaaa-tatataaatgaaggagagagaaaaatagttttaagtgattttgttaagtattagtggattctttactatc 17237105  T
Q  211 ataaatgcaaagtg 224  Q
    ||||||||||||||    
T  17237104 ataaatgcaaagtg 17237091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 223
Target Start/End: Complemental strand, 38320065 - 38319960
Alignment:
Q  119 atttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcataaatg 217  Q
    |||||||| ||||||||||||| ||||||||||||||| ||||||||||   ||| ||||   || ||   |||||||||||| ||| ||||||||||||    
T  38320065 atttcacatttattaagaaaaagtgtataagtgaaagagagagaaaaatgggtttgagtgcccttatcaactattggtgcattcttctttatcataaatg 38319966  T
Q  218 caaagt 223  Q
    ||||||    
T  38319965 caaagt 38319960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 54217527 - 54217478
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaa 166  Q
    |||||||| ||||||||||||||| ||||||||||||||| |||||||||    
T  54217527 tcatttcatacttattaagaaaaagtgtataagtgaaagagagagaaaaa 54217478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 117 - 224
Target Start/End: Original strand, 43334975 - 43335082
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtt-ttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    ||||||||||| ||||||||||| |||||||| |||| | || ||||||||||||||||||||| |||||   |||| ||||||| | ||||||  ||||    
T  43334975 tcatttcacacatattaagaaaa-atgtataaatgaatgtaatagaaaaataattttaagtgttcttgtcaaatattagtgcattctccattattttaaa 43335073  T
Q  216 tgcaaagtg 224  Q
    || ||||||    
T  43335074 tggaaagtg 43335082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 222
Target Start/End: Complemental strand, 28974466 - 28974356
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtt-ttgtcgtgtattggtgcatttttcattatc 210  Q
    |||||| ||||||||| |||||||| ||| ||||||| ||||||  ||| |||| |  ||||||||||| ||||   ||||||||||||| | |||||||    
T  28974466 tttgtttatttcacacatattaagacaaa-tgtataaatgaaagggagataaaagtggttttaagtgttgttgttaagtattggtgcattctccattatc 28974368  T
Q  211 ataaatgcaaag 222  Q
    ||||||||||||    
T  28974367 ataaatgcaaag 28974356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 223
Target Start/End: Complemental strand, 53848809 - 53848695
Alignment:
Q  110 tttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcatta 208  Q
    |||| |||||||||||  ||||||||||||| |||||||||| |||| ||| |||||| ||||| ||||   || ||   |||||||||||| ||  |||    
T  53848809 ttttggttcatttcacgtttattaagaaaaagtgtataagtgtaagagagaaaaaaatgattttgagtgcccttatcaactattggtgcattattattta 53848710  T
Q  209 tcataaatgcaaagt 223  Q
    |||||||||||||||    
T  53848709 tcataaatgcaaagt 53848695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 201
Target Start/End: Original strand, 9778878 - 9778970
Alignment:
Q  109 ttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcattt 201  Q
    |||||| |||||||||||||||||||| |||| | ||| |||||| |||||||||||||  |||||||| | ||||||  ||||| ||||||||    
T  9778878 tttttttttcatttcacacttattaag-aaaagtatattagtgaaggaaagagaaaaattgttttaagtctctttgtcaagtattagtgcattt 9778970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 21241054 - 21240939
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaa-taattttaagtgtt-ttgtcgtgtattggtgcatttttcattat 209  Q
    ||||||||||| | || |||||||||||| |||||| ||||| || ||||||||| || ||||||||| | |||||  ||||||||  |||   ||||||    
T  21241054 tttgttcatttgaaacatattaagaaaaa-tgtataggtgaaggagagagaaaaaatagttttaagtgctcttgtcaagtattggtcaattcaccattat 21240956  T
Q  210 cataaatgcaaagtgaa 226  Q
    |||||||||||||||||    
T  21240955 cataaatgcaaagtgaa 21240939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 223
Target Start/End: Complemental strand, 34021197 - 34021086
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtt-ttgtcgtgtattggtgcatttttcattatc 210  Q
    |||| ||||||||||| |||| ||| ||| ||||||| | || || |||||||||||||||| |||||| ||||   ||||||||||||| |  | ||||    
T  34021197 tttgctcatttcacacatattgagacaaa-tgtataaataaaggagagagaaaaataattttcagtgttcttgttcggtattggtgcattctctactatc 34021099  T
Q  211 ataaatgcaaagt 223  Q
    |||||||||||||    
T  34021098 ataaatgcaaagt 34021086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 38534943 - 38535010
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtt 180  Q
    ||||||||||||||||||||| | |||||||||||||  |||||| |||| |||||  |||||||||||    
T  38534943 tttgttcatttcacacttattca-aaaaaatgtataaacgaaagagagaggaaaattgttttaagtgtt 38535010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 167
Target Start/End: Original strand, 41594793 - 41594849
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaat 167  Q
    ||||||||||||||||  |||| ||||||| ||| ||||||||||| ||||||||||    
T  41594793 ttttgttcatttcacatatattgagaaaaagtgtttaagtgaaagagagagaaaaat 41594849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 223
Target Start/End: Complemental strand, 44633277 - 44633205
Alignment:
Q  152 aaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatcataaatgcaaagt 223  Q
    ||||||||||||||||| |||| ||||| ||||||  ||||||||||||| ||| |||| ||||||| |||||    
T  44633277 aaagaaagagaaaaatagttttgagtgtctttgtcaagtattggtgcattcttctttatgataaatgtaaagt 44633205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 7117304 - 7117249
Alignment:
Q  98 taataacggagtt-ttttgttcatttcacacttattaagaaaaaatgtataagtga 152  Q
    ||||||||||||| |||||||| |||||||| |||||| ||||||||| |||||||    
T  7117304 taataacggagtttttttgttcgtttcacacatattaataaaaaatgtgtaagtga 7117249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 156
Target Start/End: Original strand, 25902413 - 25902452
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaaga 156  Q
    ||||||||||| |||||||||||| |||||||||||||||    
T  25902413 tcatttcacacatattaagaaaaagtgtataagtgaaaga 25902452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 112 - 221
Target Start/End: Original strand, 40020892 - 40021004
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtata---agtgaaagaaagagaaaaataattttaagtgtttt-gtcgtgtattggtgcatttttcatt 207  Q
    |||| ||||||||||| |||||||||||| ||||||   |||||| || ||||||||||  |||| | |||||| |||  ||||||||||||||  ||||    
T  40020892 tttggtcatttcacacatattaagaaaaa-tgtatactaagtgaatgagagagaaaaatggttttgaatgtttttgtcaagtattggtgcatttaccatt 40020990  T
Q  208 atcataaatgcaaa 221  Q
    |||||| |||||||    
T  40020991 atcatagatgcaaa 40021004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 48400583 - 48400689
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    |||||||||||  |||||||||| |||||||| ||||||| |||||||||| ||||| | || |||| ||  |||||| || ||| ||| ||||||||||    
T  48400583 tcatttcacacagattaagaaaa-atgtataaatgaaagagagagaaaaatgatttttaatgcttttatcaagtattgatgtattcttctttatcataaa 48400681  T
Q  216 tgcaaagt 223  Q
    || |||||    
T  48400682 tgtaaagt 48400689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 167
Target Start/End: Original strand, 37315873 - 37315923
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaat 167  Q
    |||||| ||||||||||||||||||   |||||||||||| ||||||||||    
T  37315873 tcatttaacacttattaagaaaaaagtgataagtgaaagagagagaaaaat 37315923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 226
Target Start/End: Original strand, 38160123 - 38160213
Alignment:
Q  137 aaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatcataaatgcaaagtgaa 226  Q
    |||||||||||| | || || ||||||||||  |||||||||| ||||||   ||||| |||||| | ||||||||||||| |||||||||    
T  38160123 aaaaatgtataaataaaggagagagaaaaattgttttaagtgtctttgtcaaatattgatgcattctccattatcataaatacaaagtgaa 38160213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 177
Target Start/End: Complemental strand, 8295189 - 8295125
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagt 177  Q
    |||| |||||||||||  ||||||||||| ||||||| ||||||| ||||||||||  ||||||||    
T  8295189 tttgctcatttcacacaaattaagaaaaa-tgtataaatgaaagagagagaaaaattgttttaagt 8295125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 154
Target Start/End: Original strand, 36046002 - 36046039
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaa 154  Q
    |||||||||||||||||||||||| |||||||| ||||    
T  36046002 tcatttcacacttattaagaaaaagtgtataagagaaa 36046039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 217
Target Start/End: Complemental strand, 40202761 - 40202656
Alignment:
Q  109 ttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcatta 208  Q
    |||||| ||||||||| || |||||| ||||||| ||||| ||||||| |||||||  |||||| ||||||||||     ||||| ||||||||  ||||    
T  40202761 ttttttcttcatttcatacatattaacaaaaaatatataaatgaaagatagagaaa--taattt-aagtgttttgataaatattgatgcattttctatta 40202665  T
Q  209 tcataaatg 217  Q
    |||||||||    
T  40202664 tcataaatg 40202656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 53101869 - 53101910
Alignment:
Q  144 tataagtgaaagaaagagaaaaataattttaagtgttttgtc 185  Q
    |||||||||||||||||||||||| ||||| ||||| |||||    
T  53101869 tataagtgaaagaaagagaaaaatgattttgagtgtcttgtc 53101910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 173
Target Start/End: Original strand, 9051913 - 9051984
Alignment:
Q  101 taacggagttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataatttt 173  Q
    |||| ||| |||||||||||||||||  ||||||| |||||| ||||| |  ||||||||||||||| |||||    
T  9051913 taaccgagctttttgttcatttcacatgtattaag-aaaaatatataaatataagaaagagaaaaatgatttt 9051984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 14452093 - 14452065
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaa 140  Q
    |||||||||||||||||||||||||||||    
T  14452093 tttgttcatttcacacttattaagaaaaa 14452065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 226
Target Start/End: Original strand, 18849713 - 18849820
Alignment:
Q  119 atttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtt-ttgtcgtgtattggtgcatttttcattatcataaatg 217  Q
    ||||||||| |||||||| ||| ||||||| |||| || | ||||| ||  ||||||||| | ||||   ||||||||||||| | || |||||||||||    
T  18849713 atttcacacatattaagacaaa-tgtataaatgaaggagaaagaaatatggttttaagtgctcttgttaagtattggtgcattctccactatcataaatg 18849811  T
Q  218 caaagtgaa 226  Q
    |||||||||    
T  18849812 caaagtgaa 18849820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 165
Target Start/End: Original strand, 22020463 - 22020511
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaa 165  Q
    |||||||||||||||||||||||| ||||||| ||| ||  ||||||||    
T  22020463 tcatttcacacttattaagaaaaagtgtataaatgagagtgagagaaaa 22020511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 167
Target Start/End: Complemental strand, 32324422 - 32324366
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaat 167  Q
    ||||||| ||||| ||| |||||||||||||| || |||||||| | ||||||||||    
T  32324422 ttttgttaatttcgcacatattaagaaaaaatatacaagtgaaatagagagaaaaat 32324366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 215
Target Start/End: Original strand, 34790902 - 34791001
Alignment:
Q  116 ttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcataa 214  Q
    |||||| ||||| ||||||| |||| ||||||| ||||||  |||||||||| ||||| |||| |||| ||  ||||| ||||||| ||| |||||||||    
T  34790902 ttcattgcacacatattaag-aaaagtgtataaatgaaagtgagagaaaaatgattttgagtgcttttatcaagtatttgtgcattcttctttatcataa 34791000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 8e-21; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 120 - 223
Target Start/End: Complemental strand, 9218297 - 9218194
Alignment:
Q  120 tttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattatcataaatgca 219  Q
    |||||||| |||||||||||| ||||||||||||||| ||||||||||| |||| ||||| | ||   ||||||||||||| ||  ||||||||||||||    
T  9218297 tttcacacatattaagaaaaagtgtataagtgaaagagagagaaaaatagttttgagtgtctcgttaagtattggtgcattctttcttatcataaatgca 9218198  T
Q  220 aagt 223  Q
    ||||    
T  9218197 aagt 9218194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 117 - 226
Target Start/End: Complemental strand, 9017956 - 9017847
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    ||||||||||| |||||| ||||||||||||| ||||||| ||||||||||| ||||||||| ||||||   ||||||||||||| | || ||| |||||    
T  9017956 tcatttcacacatattaa-aaaaaatgtataaatgaaagagagagaaaaatagttttaagtgcttttgttaagtattggtgcattctccactattataaa 9017858  T
Q  216 tgcaaagtgaa 226  Q
    |||||||||||    
T  9017857 tgcaaagtgaa 9017847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 109 - 223
Target Start/End: Original strand, 39329694 - 39329808
Alignment:
Q  109 ttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcatta 208  Q
    |||||| ||| |||||||| |||||||||||||||||||||||||||| | ||| ||||| |||| | ||| ||||   ||||||||||||| ||  |||    
T  39329694 tttttttttcttttcacacatattaagaaaaaatgtataagtgaaagagaaagataaatagttttgaatgtcttgttaagtattggtgcattctttctta 39329793  T
Q  209 tcataaatgcaaagt 223  Q
    |||||||||||||||    
T  39329794 tcataaatgcaaagt 39329808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 117 - 226
Target Start/End: Original strand, 39866505 - 39866614
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    ||||||||||| ||||||||||| |||||||| |||| |||||||||||||| ||||||||| ||||||   ||||||||| ||| | || |||||||||    
T  39866505 tcatttcacacatattaagaaaa-atgtataaatgaaggaaagagaaaaatagttttaagtgattttgttaagtattggtgtattctccactatcataaa 39866603  T
Q  216 tgcaaagtgaa 226  Q
    |||||||||||    
T  39866604 tgcaaagtgaa 39866614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 98 - 223
Target Start/End: Original strand, 44218967 - 44219091
Alignment:
Q  98 taataacggagttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgc 197  Q
    |||||||  ||| ||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||  |||| ||||| ||||   || |||||||    
T  44218967 taataacccagtcttttgttcatttcacacatattaagaaaaagtgtataagtcaaagaaagagaaaaatggttttgagtgtcttgt-aagtgttggtgc 44219065  T
Q  198 atttttcattatcataaatgcaaagt 223  Q
    |||   ||||||||||||| ||||||    
T  44219066 attccccattatcataaatacaaagt 44219091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 136 - 223
Target Start/End: Original strand, 38524263 - 38524350
Alignment:
Q  136 aaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattatcataaatgcaaagt 223  Q
    ||||||||||||||||||||||| ||||||||| |||| | |||||| ||  |||||| || ||||||||| ||||||||| ||||||    
T  38524263 aaaaaatgtataagtgaaagaaaaagaaaaatagttttgaatgttttatcaagtattgatgtatttttcatcatcataaatacaaagt 38524350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 116 - 226
Target Start/End: Original strand, 54122175 - 54122285
Alignment:
Q  116 ttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtttt-gtcgtgtattggtgcatttttcattatcataa 214  Q
    |||||||||||| |||||||| ||| ||||||| |||| || ||||||||||| |||||| |||||| ||   ||||||||||||| | || ||||||||    
T  54122175 ttcatttcacacatattaagacaaa-tgtataaatgaaggagagagaaaaatagttttaaatgtttttgttaagtattggtgcattctccactatcataa 54122273  T
Q  215 atgcaaagtgaa 226  Q
    ||||||||||||    
T  54122274 atgcaaagtgaa 54122285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 112 - 224
Target Start/End: Complemental strand, 10855154 - 10855042
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatc 210  Q
    |||| ||||||||||| |||||||| ||| ||||||| |||| || ||||||||||| ||||||||| |||| |  |||||||||||||| | || | ||    
T  10855154 tttgatcatttcacacgtattaagataaa-tgtataaatgaaggagagagaaaaatagttttaagtgtttttattatgtattggtgcattatccactctc 10855056  T
Q  211 ataaatgcaaagtg 224  Q
    ||||||||||||||    
T  10855055 ataaatgcaaagtg 10855042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 120 - 221
Target Start/End: Original strand, 42547061 - 42547162
Alignment:
Q  120 tttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattatcataaatgca 219  Q
    |||||||| |||||||||||||| ||||||| ||||| ||| ||||||| |||| | ||| ||||   ||||||||||||| ||  ||||||||||||||    
T  42547061 tttcacacatattaagaaaaaatttataagtaaaagagagaaaaaaatagttttgaatgtcttgttaagtattggtgcattctttcttatcataaatgca 42547160  T
Q  220 aa 221  Q
    ||    
T  42547161 aa 42547162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 153 - 221
Target Start/End: Complemental strand, 31651030 - 31650962
Alignment:
Q  153 aagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattatcataaatgcaaa 221  Q
    ||||| ||||||||| ||||||||||| |||||  ||||| ||||||||||||||||||||||| ||||    
T  31651030 aagaatgagaaaaatgattttaagtgtcttgtcaagtatttgtgcatttttcattatcataaatacaaa 31650962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 24618873 - 24618940
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg 178  Q
    ||||| || ||||||||||||||||||||| ||||||||||||||  ||||||||||  |||||||||    
T  24618873 ttttgctcgtttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaagtg 24618940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 224
Target Start/End: Complemental strand, 2868734 - 2868622
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaag-tgttttgtcgtgtattggtgcatttttcattatc 210  Q
    |||| ||||||||||| |||||||||||| ||||||| |||| || ||||||||||  ||||||| | ||||||  ||||||| |||||| | || | ||    
T  2868734 tttgctcatttcacacatattaagaaaaa-tgtataaatgaaggagagagaaaaatggttttaagttcttttgttatgtattgctgcattctccactgtc 2868636  T
Q  211 ataaatgcaaagtg 224  Q
    ||||||||||||||    
T  2868635 ataaatgcaaagtg 2868622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 45267165 - 45267214
Alignment:
Q  107 agttttttgttcatttcacacttattaagaaaaaatgtataagtgaaaga 156  Q
    ||||||| ||||||||||||| ||||||||||||||||| ||||||||||    
T  45267165 agtttttggttcatttcacacatattaagaaaaaatgtacaagtgaaaga 45267214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 223
Target Start/End: Complemental strand, 51165105 - 51165001
Alignment:
Q  119 atttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatcataaatg 217  Q
    |||||||||  ||||||||||  ||||||| | ||||| |||||||||||||||| ||||| ||| ||  ||||||||||||| ||| ||||||||||||    
T  51165105 atttcacacaaattaagaaaag-tgtataaataaaagagagagaaaaataattttgagtgtctttatcaagtattggtgcattcttctttatcataaatg 51165007  T
Q  218 caaagt 223  Q
     |||||    
T  51165006 taaagt 51165001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 53583501 - 53583618
Alignment:
Q  106 gagttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttca 205  Q
    |||| |||||| ||||||||   || ||||||||| |||||||  |||||| | ||||||||| |||| | ||| |||||  |||||| |||||| ||||    
T  53583501 gagtcttttgtccatttcacgtgtactaagaaaaagtgtataaaagaaagagatagaaaaatagttttgaatgtgttgtcaagtattgatgcattcttca 53583600  T
Q  206 ttatcataaatgcaaagt 223  Q
    |||| |||||||||||||    
T  53583601 ttattataaatgcaaagt 53583618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 115 - 226
Target Start/End: Original strand, 32827254 - 32827365
Alignment:
Q  115 gttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcata 213  Q
    ||||||||||||| ||||||| |||||||||||| |||| || ||| ||||||| |||||||||   ||||   ||||||||||||| | || |||||||    
T  32827254 gttcatttcacacgtattaag-aaaaatgtataaatgaaggagagaaaaaaatagttttaagtgcacttgttacgtattggtgcattctccactatcata 32827352  T
Q  214 aatgcaaagtgaa 226  Q
    |||| ||||||||    
T  32827353 aatgtaaagtgaa 32827365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 117 - 224
Target Start/End: Complemental strand, 33994812 - 33994705
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    ||||||||||| ||| |||||||| ||||||| |||| || |||||||||||||||||||||   ||||   ||||||||||||| | || |||||||||    
T  33994812 tcatttcacacgtatcaagaaaaa-tgtataaatgaaggagagagaaaaataattttaagtgcacttgttaagtattggtgcattctccactatcataaa 33994714  T
Q  216 tgcaaagtg 224  Q
    || ||||||    
T  33994713 tgtaaagtg 33994705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 111 - 162
Target Start/End: Complemental strand, 39144822 - 39144770
Alignment:
Q  111 ttttgttcatttcacacttattaagaa-aaaatgtataagtgaaagaaagaga 162  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||| |||||    
T  39144822 ttttgttcatttcacacatattaagaaaaaaatgtataagtgaaagagagaga 39144770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 119 - 167
Target Start/End: Original strand, 46194160 - 46194208
Alignment:
Q  119 atttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaat 167  Q
    |||||||||||||||||||||| ||||||||| ||||| ||||||||||    
T  46194160 atttcacacttattaagaaaaagtgtataagttaaagagagagaaaaat 46194208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 1923241 - 1923193
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaat 167  Q
    |||||||||||||||||||||||| ||||||||||||  ||||||||||||    
T  1923241 tcatttcacacttattaagaaaaagtgtataagtgaa--aaagagaaaaat 1923193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 226
Target Start/End: Original strand, 11251078 - 11251188
Alignment:
Q  116 ttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtt-ttgtcgtgtattggtgcatttttcattatcataa 214  Q
    |||||||||||  |||||||||||| ||||||| |||| || ||| |||||| |||||||||| | ||||   ||||||||||||| | || ||||||||    
T  11251078 ttcatttcacatatattaagaaaaa-tgtataaatgaatgagagaaaaaaatgattttaagtgctcttgttaagtattggtgcattctccactatcataa 11251176  T
Q  215 atgcaaagtgaa 226  Q
    ||||||| ||||    
T  11251177 atgcaaattgaa 11251188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 22756182 - 22756248
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt 179  Q
    |||| ||||||||||| ||||||| |||  ||||||| ||||||||| ||||||||||||||||||||    
T  22756182 tttgatcatttcacacatattaaggaaat-tgtataaatgaaagaaatagaaaaataattttaagtgt 22756248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 51636843 - 51636945
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaag-tgttttgtcgtgtattggtgcatttttcattatc 210  Q
    ||||||||||||| | |||||||| |||||||| |||||||| || ||||||||||  ||||||| ||| ||| |  ||||||||||||||  |||||||    
T  51636843 tttgttcatttcataattattaag-aaaaatgtttaagtgaaggagagagaaaaatggttttaagttgtcttgccaagtattggtgcatttaccattatc 51636941  T
Q  211 ataa 214  Q
    ||||    
T  51636942 ataa 51636945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 224
Target Start/End: Original strand, 30261449 - 30261560
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattatc 210  Q
    ||||||||||||||| | |||||||||| | ||||  ||||||||| ||||||||||| |||| | ||  |||||  |||||||||||||  |  |||||    
T  30261449 ttttgttcatttcacgcatattaagaaagagtgta--agtgaaagagagagaaaaatagttttgactggcttgtcaagtattggtgcattccttcttatc 30261546  T
Q  211 ataaatgcaaagtg 224  Q
    ||||||| ||||||    
T  30261547 ataaatgtaaagtg 30261560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 156
Target Start/End: Complemental strand, 47684915 - 47684857
Alignment:
Q  98 taataacggagttttttgttcatttcacacttattaagaaaaaatgtataagtgaaaga 156  Q
    ||||||| |||| ||||||||||||||||| |||||||||||  |||| ||||||||||    
T  47684915 taataaccgagtcttttgttcatttcacacatattaagaaaaggtgtacaagtgaaaga 47684857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 223
Target Start/End: Original strand, 21296476 - 21296561
Alignment:
Q  139 aaatgtataagtgaaagaaagagaaaaataattttaagtgtt-ttgtcgtgtattggtgcatttttcattatcataaatgcaaagt 223  Q
    |||||||||| |||| || |||| ||||| ||||||| || | ||||   |||||||||||||||||| |||||||||||||||||    
T  21296476 aaatgtataaatgaaggagagaggaaaatgattttaaatgctcttgttaagtattggtgcatttttcactatcataaatgcaaagt 21296561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 14756061 - 14756172
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatc 210  Q
    |||| |||||| |||| ||||||||||| |||||||| | || || ||||||||||||||||||||| | ||||   ||| |||| |||| | || ||||    
T  14756061 tttgctcattttacacatattaagaaaa-atgtataattaaaggagagagaaaaataattttaagtgctcttgttaagtactggtacattctccactatc 14756159  T
Q  211 ataaatgcaaagt 223  Q
    |||||||||||||    
T  14756160 ataaatgcaaagt 14756172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 22202321 - 22202376
Alignment:
Q  119 atttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaa 175  Q
    ||||||||| |||||||| ||| ||||||| |||| |||||||||||||||||||||    
T  22202321 atttcacacatattaagataaa-tgtataaatgaaggaaagagaaaaataattttaa 22202376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 223
Target Start/End: Complemental strand, 41287402 - 41287311
Alignment:
Q  133 aagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatcataaatgcaaagt 223  Q
    ||||||| |||||||||||||||| ||||||||||  |||| | | | ||||||  |||||| |||||| ||| |||||||||||| |||||    
T  41287402 aagaaaacatgtataagtgaaagagagagaaaaatggttttgactatctttgtcaagtattgatgcattattctttatcataaatgtaaagt 41287311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 226
Target Start/End: Original strand, 43639471 - 43639577
Alignment:
Q  120 tttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtt-ttgtcgtgtattggtgcatttttcattatcataaatgc 218  Q
    |||||||| |||||||| ||| | ||||| |||| || ||||||||||  ||||||||| | ||||   |||||| |||||||| || ||||||||||||    
T  43639471 tttcacacatattaagacaaa-tatataaatgaaggagagagaaaaatggttttaagtgctgttgttaagtattgatgcattttccactatcataaatgc 43639569  T
Q  219 aaagtgaa 226  Q
    ||||||||    
T  43639570 aaagtgaa 43639577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 166
Target Start/End: Original strand, 11529023 - 11529076
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaa 166  Q
    |||| ||||||||||| |||||||||||| | ||||| |||||||||||||||||    
T  11529023 tttgctcatttcacacatattaagaaaaa-tatataaatgaaagaaagagaaaaa 11529076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 167
Target Start/End: Original strand, 36790772 - 36790822
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaat 167  Q
    |||||| ||| ||||||| ||||| ||||||||||||||| ||||||||||    
T  36790772 tcattttacatttattaaaaaaaattgtataagtgaaagagagagaaaaat 36790822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 224
Target Start/End: Original strand, 54458259 - 54458368
Alignment:
Q  116 ttcatttcacacttattaagaaaaaatgtataagtgaaagaa-agagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatcata 213  Q
    ||||||||| |  |||||||||||| ||||||| | |||||| | |||||||| |||||||||| ||||||   |||| |||||||| | ||||||||||    
T  54458259 ttcatttcataaatattaagaaaaattgtataaat-aaagaagatagaaaaatgattttaagtgattttgttaagtatgggtgcattctccattatcata 54458357  T
Q  214 aatgcaaagtg 224  Q
    |||| ||||||    
T  54458358 aatgtaaagtg 54458368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 142
Target Start/End: Complemental strand, 8769394 - 8769353
Alignment:
Q  101 taacggagttttttgttcatttcacacttattaagaaaaaat 142  Q
    |||| ||||||||||||||||||| || ||||||||||||||    
T  8769394 taactgagttttttgttcatttcatacatattaagaaaaaat 8769353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 224
Target Start/End: Original strand, 17776941 - 17777053
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatc 210  Q
    |||| ||||||||||| |||||| ||||||||||||| |||| || ||||||||||  ||||| ||| |||| |   ||||| ||||||| | || || |    
T  17776941 tttgctcatttcacacgtattaa-aaaaaatgtataaatgaatgagagagaaaaatggttttaggtgctttttttaagtatttgtgcattctccactacc 17777039  T
Q  211 ataaatgcaaagtg 224  Q
    ||||||||||||||    
T  17777040 ataaatgcaaagtg 17777053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 224
Target Start/End: Original strand, 19078242 - 19078354
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcattatc 210  Q
    |||| ||||||||||| |||||| ||||||||||||| |||| || ||||||||||  ||||| ||| |||| |   ||||| ||||||| | || || |    
T  19078242 tttgctcatttcacacgtattaa-aaaaaatgtataaatgaatgagagagaaaaatggttttaggtgctttttttaagtatttgtgcattctccactacc 19078340  T
Q  211 ataaatgcaaagtg 224  Q
    ||||||||||||||    
T  19078341 ataaatgcaaagtg 19078354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 27668351 - 27668388
Alignment:
Q  189 tattggtgcatttttcattatcataaatgcaaagtgaa 226  Q
    ||||| || |||||||||||||||||||||||||||||    
T  27668351 tattgatgtatttttcattatcataaatgcaaagtgaa 27668388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 54783118 - 54783058
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg 178  Q
    ||||| ||||| |||||||||||| ||||||| |||| || ||||||||||| |||||||||    
T  54783118 tcattgcacacgtattaagaaaaa-tgtataaatgaatgagagagaaaaatagttttaagtg 54783058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 151
Target Start/End: Original strand, 26479818 - 26479854
Alignment:
Q  115 gttcatttcacacttattaagaaaaaatgtataagtg 151  Q
    |||||||||||||||||||||||||| | ||||||||    
T  26479818 gttcatttcacacttattaagaaaaagtatataagtg 26479854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 216
Target Start/End: Original strand, 36315679 - 36315784
Alignment:
Q  110 tttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcatta 208  Q
    |||||| ||||| ||||| |||||||||||| ||||||||| ||||  |||||||||  ||||  ||||| |||||   |||||||| |||| ||| |||    
T  36315679 tttttgctcattccacacatattaagaaaaagtgtataagtaaaag--agagaaaaacgatttcgagtgtctttgttaagtattggtacattcttcttta 36315776  T
Q  209 tcataaat 216  Q
    ||||||||    
T  36315777 tcataaat 36315784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 179
Target Start/End: Original strand, 40614071 - 40614139
Alignment:
Q  106 gagttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt 179  Q
    |||| ||||||||||||||||| |||||| |||| || |||||||||||||||    ||||||||||| |||||    
T  40614071 gagtcttttgttcatttcacacatattaa-aaaatatatataagtgaaagaaa----aaaataattttgagtgt 40614139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 49408669 - 49408602
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtt 180  Q
    |||| |||||||| || ||||||||| || | ||||| |||| |||||||||||||| |||||||||||    
T  49408669 tttgctcatttcatacatattaagaataatt-tataaatgaaggaaagagaaaaatagttttaagtgtt 49408602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 223
Target Start/End: Original strand, 53754034 - 53754122
Alignment:
Q  136 aaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatcataaatgcaaagt 223  Q
    ||||| ||||||| ||||| | |||||||||| ||||| ||||| ||||    ||||||||||||| ||| |||||||||||| |||||    
T  53754034 aaaaagtgtataaatgaaatagagagaaaaatgattttgagtgtctttggtaagtattggtgcattcttctttatcataaatgtaaagt 53754122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 5e-19; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 115 - 223
Target Start/End: Original strand, 15371813 - 15371921
Alignment:
Q  115 gttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattatcataa 214  Q
    |||||||||||| ||||||||||||| ||||||||||||||  ||||||||||  |||| ||||| || ||   |||| ||||||| ||| |||||||||    
T  15371813 gttcatttcacaattattaagaaaaagtgtataagtgaaagcgagagaaaaatggttttgagtgtcttatcaactattagtgcattcttctttatcataa 15371912  T
Q  215 atgcaaagt 223  Q
    |||||||||    
T  15371913 atgcaaagt 15371921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 226
Target Start/End: Original strand, 8569589 - 8569698
Alignment:
Q  113 ttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattatcat 212  Q
    ||||||||||||||| ||||||  ||||||||||||||||| || | |||||||| |||||||||||||  | ||||||||||| |||   || ||||||    
T  8569589 ttgttcatttcacacgtattaa--aaaaatgtataagtgaatgagaaagaaaaatgattttaagtgttt--ttgtgtattggtgtattcaccactatcat 8569684  T
Q  213 aaatgcaaagtgaa 226  Q
    ||||||||||||||    
T  8569685 aaatgcaaagtgaa 8569698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 111 - 223
Target Start/End: Complemental strand, 16126373 - 16126260
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaag-agaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattat 209  Q
    ||||||||||||||||| |||||||||||| |||| ||| |||||| || | ||||| | |||| ||||| ||||   |||||||||||||| |  ||||    
T  16126373 ttttgttcatttcacacgtattaagaaaaagtgtaaaagcgaaagagagaaaaaaaacagttttgagtgtcttgtaaagtattggtgcatttattcttat 16126274  T
Q  210 cataaatgcaaagt 223  Q
    ||||||||||||||    
T  16126273 cataaatgcaaagt 16126260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 115 - 223
Target Start/End: Complemental strand, 15355732 - 15355624
Alignment:
Q  115 gttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattatcataa 214  Q
    |||||||| ||| ||||||||||||| ||||||||||||| | |||||||| |  |||| ||||| || ||   |||||||||||| ||| |||||||||    
T  15355732 gttcattttacaattattaagaaaaagtgtataagtgaaaaagagagaaaattggttttgagtgtcttatcaactattggtgcattcttctttatcataa 15355633  T
Q  215 atgcaaagt 223  Q
    || ||||||    
T  15355632 atccaaagt 15355624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 220
Target Start/End: Original strand, 15351335 - 15351438
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattatcataaat 216  Q
    |||||||||| |||||||||||||||||||||||||| || |||||||| | ||||| ||||  || ||   ||||| ||| || ||| |||||||||||    
T  15351335 tcatttcacaattattaagaaaaaatgtataagtgaatgagagagaaaattgatttttagtgccttatcaactattgatgcgttcttctttatcataaat 15351434  T
Q  217 gcaa 220  Q
    ||||    
T  15351435 gcaa 15351438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 20027724 - 20027638
Alignment:
Q  131 ttaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatcataaat 216  Q
    |||||||||| ||||||||||||||||| || ||||| ||||| ||||| |||||   ||||||||||||| ||| |||||||||||    
T  20027724 ttaagaaaaagtgtataagtgaaagaaatagcaaaatgattttgagtgtctttgttaagtattggtgcattcttctttatcataaat 20027638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 136 - 223
Target Start/End: Original strand, 3874020 - 3874108
Alignment:
Q  136 aaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatcataaatgcaaagt 223  Q
    ||||| ||||||| ||||||| ||| |||||| ||||| ||||| ||||||  ||||||||||||| ||| |||||||||||| |||||    
T  3874020 aaaaagtgtataaatgaaagagagaaaaaaatgattttgagtgtctttgtcaagtattggtgcattattctttatcataaatgtaaagt 3874108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 119 - 223
Target Start/End: Original strand, 15321179 - 15321283
Alignment:
Q  119 atttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattatcataaatgc 218  Q
    |||||||| ||||||||||||| ||||||| ||||||| |||||||| |  |||| ||||| || |    ||||||||| || ||| |||||||||||||    
T  15321179 atttcacaattattaagaaaaagtgtataactgaaagagagagaaaattggttttcagtgtcttataaactattggtgcgttcttctttatcataaatgc 15321278  T
Q  219 aaagt 223  Q
    |||||    
T  15321279 aaagt 15321283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 15325302 - 15325254
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaa 165  Q
    |||||||||| ||||||||||||| ||||||||||||||| ||||||||    
T  15325302 tcatttcacaattattaagaaaaagtgtataagtgaaagagagagaaaa 15325254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 111 - 167
Target Start/End: Original strand, 31075870 - 31075926
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaat 167  Q
    ||||||||||||||| |  |||||||||||||||| |||||||||| ||||||||||    
T  31075870 ttttgttcatttcacccacattaagaaaaaatgtacaagtgaaagagagagaaaaat 31075926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 20384007 - 20383900
Alignment:
Q  110 tttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattat 209  Q
    ||||||||| ||| |||| |||||||||||  | | ||||||||||| ||| ||||||  |||| ||||| |||||  |||||||||||||  |||||||    
T  20384007 tttttgttcctttaacacatattaagaaaaggtatgtaagtgaaagagagaaaaaaatggttttgagtgtcttgtcaagtattggtgcattcctcattat 20383908  T
Q  210 cataaatg 217  Q
    | ||||||    
T  20383907 cttaaatg 20383900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 31265941 - 31265827
Alignment:
Q  110 tttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg-ttttgtcgtgtattggtgcatttttcatta 208  Q
    ||||| || ||||||||| |||||||| ||| ||||||| |||| || ||||||||||| ||||||||| | ||||   ||||||||||||| | || ||    
T  31265941 tttttttttatttcacacatattaagacaaa-tgtataaatgaaggagagagaaaaatagttttaagtgctcttgttaagtattggtgcattctccacta 31265843  T
Q  209 tcataaatgcaaagtg 224  Q
    ||||||||| ||||||    
T  31265842 tcataaatgtaaagtg 31265827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 226
Target Start/End: Complemental strand, 4238575 - 4238467
Alignment:
Q  116 ttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtt-ttgtcgtgtattggtgcatttttcattatcataa 214  Q
    |||||||||||| ||| |||| ||| ||||||| |||||||  |||||| ||| ||||||||| | ||||   ||||||||||||| |||| ||||||||    
T  4238575 ttcatttcacacatatcaagataaa-tgtataaatgaaaga--gagaaatatagttttaagtgctcttgttaagtattggtgcattcttcactatcataa 4238479  T
Q  215 atgcaaagtgaa 226  Q
    ||| ||||||||    
T  4238478 atgtaaagtgaa 4238467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 33921416 - 33921527
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatc 210  Q
    |||| ||||||| ||||||||||| |||||| ||| |||||| || ||||||||||  |||| ||||| |||||   |||||||| |||| ||| |||||    
T  33921416 tttgctcatttcgcacttattaag-aaaaatatattagtgaaggagagagaaaaatggttttgagtgtgtttgttaagtattggtccattcttctttatc 33921514  T
Q  211 ataaatgcaaagt 223  Q
    ||||||| |||||    
T  33921515 ataaatgtaaagt 33921527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 224
Target Start/End: Original strand, 34915758 - 34915872
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaa--aataattttaagtgtttt-gtcgtgtattggtgcatttttcatta 208  Q
    |||| ||||||||||  |||||||||||| |||||||  |||||| ||||| |  ||| |||||||||||||  ||   ||||||||||||| | |||||    
T  34915758 tttgctcatttcacatatattaagaaaaa-tgtataaacgaaagagagagagagaaatgattttaagtgtttacgttaagtattggtgcattctccatta 34915856  T
Q  209 tcataaatgcaaagtg 224  Q
    ||||||||||||||||    
T  34915857 tcataaatgcaaagtg 34915872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 4553057 - 4553006
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagt-gaaagaaagagaaaaat 167  Q
    ||||||||||||||||||||||| ||||||||||  ||||| ||||||||||    
T  4553057 tcatttcacacttattaagaaaatatgtataagtaaaaagagagagaaaaat 4553006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 224
Target Start/End: Original strand, 7301036 - 7301139
Alignment:
Q  119 atttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatcataaatg 217  Q
    ||||||||| |||||||||||| ||||||| | || ||  |||||||||| |||||||||| |||||   ||||| ||||||| | ||||||||||||||    
T  7301036 atttcacacgtattaagaaaaa-tgtataaataaatga--gagaaaaatagttttaagtgtgtttgttaagtatttgtgcattctccattatcataaatg 7301132  T
Q  218 caaagtg 224  Q
     ||||||    
T  7301133 taaagtg 7301139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 14312619 - 14312722
Alignment:
Q  137 aaaaatgtataagtgaaagaaagagaaaaataattttaagtgtttt-gtcgtgtattggtgcatttttcattatcataaatgcaaagtgaagggtgttga 235  Q
    ||||||| |||| |||| || | ||||||||  ||||||||||||| ||   ||||||||||||| | |||||||||||||| ||||||||  || ||||    
T  14312619 aaaaatgcataaatgaaggacatagaaaaatggttttaagtgtttttgttaagtattggtgcattctccattatcataaatgtaaagtgaaatgtattga 14312718  T
Q  236 attg 239  Q
    ||||    
T  14312719 attg 14312722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 156
Target Start/End: Complemental strand, 7167919 - 7167869
Alignment:
Q  106 gagttttttgttcatttcacacttattaagaaaaaatgtataagtgaaaga 156  Q
    |||| |||||||  |||||||| |||||||||||||| |||||||||||||    
T  7167919 gagtattttgttagtttcacacgtattaagaaaaaatatataagtgaaaga 7167869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 175
Target Start/End: Complemental strand, 31133350 - 31133312
Alignment:
Q  137 aaaaatgtataagtgaaagaaagagaaaaataattttaa 175  Q
    |||| ||||||||||||||||| ||||||||||||||||    
T  31133350 aaaagtgtataagtgaaagaaaaagaaaaataattttaa 31133312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 33413712 - 33413766
Alignment:
Q  130 attaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgt 184  Q
    ||||| ||||||||||||||| ||  ||||||||||||| |||||||| ||||||    
T  33413712 attaaaaaaaaatgtataagtaaagaaaagagaaaaatagttttaagttttttgt 33413766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 167
Target Start/End: Original strand, 34803656 - 34803706
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaat 167  Q
    |||||||||||||||||||||||| |||||||  |||||| |||| |||||    
T  34803656 tcatttcacacttattaagaaaaagtgtataaaggaaagagagaggaaaat 34803706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 15081578 - 15081518
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg 178  Q
    ||||||||||| |||||||||||| ||||||| |||| |  ||||||||||| |||||||||    
T  15081578 tcatttcacacgtattaagaaaaa-tgtataaatgaaggtgagagaaaaatagttttaagtg 15081518  T

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Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 223
Target Start/End: Original strand, 3166078 - 3166166
Alignment:
Q  136 aaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatcataaatgcaaagt 223  Q
    ||||| ||||||| ||||||| ||||||||||| |||| ||||| |||  |  |||||| || ||||||| |||||||||||| |||||    
T  3166078 aaaaagtgtataaatgaaagagagagaaaaatagttttgagtgtctttaacaagtattgatgtatttttctttatcataaatgtaaagt 3166166  T

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Target: scaffold0576 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 115 - 223
Target Start/End: Complemental strand, 722 - 614
Alignment:
Q  115 gttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgttttgtcgtgtattggtgcatttttcattatcataa 214  Q
    |||||||| ||| ||||||||||||| ||||||||||||| | |||||||| |  |||| ||||| || ||   |||||||||||| ||| |||||||||    
T  722 gttcattttacaattattaagaaaaagtgtataagtgaaaaagagagaaaattggttttgagtgtcttatcaactattggtgcattcttctttatcataa 623  T
Q  215 atgcaaagt 223  Q
    || ||||||    
T  622 atccaaagt 614  T

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Target: scaffold0034 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 98985 - 98920
Alignment:
Q  112 tttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg 178  Q
    |||||||||||||||| |||||||||||| ||||||| |||| || |||||||||| ||||||||||    
T  98985 tttgttcatttcacacatattaagaaaaa-tgtataaatgaatgagagagaaaaatgattttaagtg 98920  T

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Target: scaffold0227 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 9021 - 8957
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtttt 182  Q
    ||||||||||| |||||||||||| ||||||| ||||  | |||||||||||||||||||||||||    
T  9021 tcatttcacacatattaagaaaaa-tgtataaatgaagaagagagaaaaataattttaagtgtttt 8957  T

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Target: scaffold0491 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 11865 - 11757
Alignment:
Q  105 ggagttttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaat----aattttaagtgttttgtcgtgtattggtgcatt 200  Q
    |||| |||||||||||||||| | ||||||||||||   ||||| ||||||| ||||||||||    | |||| ||||| |||| | |||||||||||||    
T  11865 ggagctttttgttcatttcacgcatattaagaaaaatgatataactgaaagagagagaaaaatgatcagttttgagtgtcttgtagagtattggtgcatt 11766  T
Q  201 tttcattat 209  Q
    || ||||||    
T  11765 ttccattat 11757  T

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Target: scaffold0262 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 12387 - 12494
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    ||||||||||| ||||||||||||| |||||| ||||||| || ||| |||  |||| ||||| ||||||  ||||| ||||||| ||| |||| |||||    
T  12387 tcatttcacacgtattaagaaaaaacgtataaatgaaagagagtgaataatggttttgagtgtctttgtcaagtattagtgcattcttctttattataaa 12486  T
Q  216 tgcaaagt 223  Q
    || |||||    
T  12487 tgtaaagt 12494  T

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Target: scaffold0155 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 7873 - 7932
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtg 178  Q
    |||||||||| ||||||||||||||||||||| ||||||  |||||||||| ||||| ||||    
T  7873 tcatttcacatttattaagaaaaaatgtataaatgaaag--agagaaaaattattttgagtg 7932  T

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Target: scaffold0221 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 10741 - 10849
Alignment:
Q  117 tcatttcacacttattaagaaaaaa-tgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatcataa 214  Q
    |||||||||| |||||||||||||| ||| ||||||||||| ||||||||||   ||| |||||  || ||   ||||||| |||| ||| |||||||||    
T  10741 tcatttcacagttattaagaaaaaaatgtgtaagtgaaagagagagaaaaatgggtttgagtgtccttatcaactattggttcattcttctttatcataa 10840  T
Q  215 atgcaaagt 223  Q
    |||||||||    
T  10841 atgcaaagt 10849  T

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Target: scaffold0003 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 352415 - 352519
Alignment:
Q  117 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgt-tttgtcgtgtattggtgcatttttcattatcataaa 215  Q
    |||||||||||  ||||||||||  ||||||| | |||||  ||||||||||||||| ||||| |||||   ||||||||||||| ||| ||||||||||    
T  352415 tcatttcacacagattaagaaaag-tgtataaataaaaga--gagaaaaataattttgagtgtctttgttaagtattggtgcattcttctttatcataaa 352511  T
Q  216 tgcaaagt 223  Q
    || |||||    
T  352512 tgtaaagt 352519  T

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Target: scaffold0006 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 224
Target Start/End: Complemental strand, 229983 - 229871
Alignment:
Q  111 ttttgttcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaataattttaagtgtt-ttgtcgtgtattggtgcatttttcattat 209  Q
    |||| ||| |||||||| |||||||| ||| ||||||| |||| || | ||||||||  ||||||||| | ||||   ||||||||||||| | ||||||    
T  229983 tttttttcttttcacacgtattaagacaaa-tgtataaatgaaggagatagaaaaatg-ttttaagtgctcttgttaagtattggtgcattctccattat 229886  T
Q  210 cataaatgcaaagtg 224  Q
    |||||||||||||||    
T  229885 cataaatgcaaagtg 229871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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