View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: F9327-LTR4-TNT-insertion-2 (Length: 393)

Name: F9327-LTR4-TNT-insertion-2
Description: F9327-LTR4
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] F9327-LTR4-TNT-insertion-2
F9327-LTR4-TNT-insertion-2
[»] chr3 (55 HSPs)
chr3 (11-383)||(31999518-31999890)
chr3 (30-194)||(32007791-32007955)
chr3 (302-381)||(22981393-22981472)
chr3 (307-381)||(50935459-50935533)
chr3 (306-381)||(42167543-42167618)
chr3 (310-381)||(55135197-55135268)
chr3 (308-381)||(7041569-7041641)
chr3 (308-381)||(37178242-37178315)
chr3 (310-381)||(38698796-38698867)
chr3 (308-379)||(43860468-43860539)
chr3 (310-381)||(54410692-54410763)
chr3 (307-377)||(36465584-36465654)
chr3 (320-381)||(39132432-39132493)
chr3 (308-381)||(48071722-48071795)
chr3 (314-381)||(3890777-3890844)
chr3 (310-381)||(6488922-6488993)
chr3 (309-381)||(41889698-41889772)
chr3 (307-381)||(31311665-31311739)
chr3 (327-381)||(50938513-50938567)
chr3 (320-381)||(22977839-22977900)
chr3 (310-381)||(44841226-44841298)
chr3 (313-381)||(50535960-50536028)
chr3 (329-380)||(2229437-2229488)
chr3 (307-381)||(11123632-11123707)
chr3 (307-381)||(23022012-23022087)
chr3 (307-381)||(27330112-27330187)
chr3 (310-381)||(30361644-30361715)
chr3 (318-381)||(39129068-39129130)
chr3 (308-381)||(13243560-13243634)
chr3 (316-381)||(30043630-30043696)
chr3 (308-381)||(18763901-18763974)
chr3 (320-381)||(32001221-32001282)
chr3 (305-381)||(40908476-40908553)
chr3 (308-381)||(42876988-42877061)
chr3 (309-381)||(45051738-45051811)
chr3 (308-380)||(51720860-51720932)
chr3 (310-381)||(55219869-55219940)
chr3 (316-381)||(8852289-8852355)
chr3 (308-374)||(42827983-42828049)
chr3 (315-381)||(43338222-43338288)
chr3 (308-381)||(43359558-43359632)
chr3 (316-381)||(44843337-44843403)
chr3 (308-381)||(53583691-53583765)
chr3 (315-381)||(54409366-54409432)
chr3 (321-381)||(11121085-11121146)
chr3 (321-381)||(13213299-13213360)
chr3 (344-381)||(22731409-22731446)
chr3 (232-297)||(29183304-29183369)
chr3 (309-381)||(37218168-37218241)
chr3 (321-381)||(37785292-37785353)
chr3 (320-381)||(55136627-55136687)
chr3 (341-381)||(41888591-41888631)
chr3 (353-381)||(43357894-43357922)
chr3 (310-381)||(47910953-47911025)
chr3 (310-381)||(50546473-50546545)
[»] chr4 (55 HSPs)
chr4 (308-381)||(26923816-26923889)
chr4 (308-381)||(7113857-7113930)
chr4 (308-381)||(47649399-47649472)
chr4 (308-381)||(10659162-10659234)
chr4 (308-381)||(10873307-10873379)
chr4 (308-381)||(19869707-19869780)
chr4 (310-381)||(6504257-6504328)
chr4 (307-381)||(14270101-14270174)
chr4 (311-381)||(24577916-24577986)
chr4 (307-381)||(43304847-43304921)
chr4 (308-381)||(43940382-43940456)
chr4 (306-381)||(34074963-34075038)
chr4 (310-381)||(47805597-47805668)
chr4 (315-381)||(26917639-26917705)
chr4 (320-381)||(38623615-38623676)
chr4 (320-381)||(48952788-48952849)
chr4 (320-381)||(50792702-50792763)
chr4 (305-381)||(46719690-46719766)
chr4 (322-381)||(7111062-7111121)
chr4 (320-381)||(6506007-6506068)
chr4 (308-380)||(7489261-7489334)
chr4 (320-381)||(19871237-19871297)
chr4 (312-381)||(31624678-31624747)
chr4 (315-383)||(31309420-31309488)
chr4 (310-381)||(13530035-13530106)
chr4 (310-381)||(16666661-16666732)
chr4 (316-381)||(4652794-4652860)
chr4 (315-381)||(8081203-8081269)
chr4 (320-382)||(30112170-30112232)
chr4 (315-381)||(34072860-34072926)
chr4 (308-381)||(41039572-41039646)
chr4 (316-381)||(41041599-41041665)
chr4 (308-381)||(52449336-52449410)
chr4 (316-377)||(16664490-16664551)
chr4 (316-381)||(20787198-20787263)
chr4 (316-381)||(31292758-31292823)
chr4 (310-381)||(8941229-8941301)
chr4 (305-381)||(23931586-23931662)
chr4 (321-381)||(35044897-35044957)
chr4 (310-381)||(17518858-17518929)
chr4 (334-381)||(42180217-42180264)
chr4 (308-381)||(3033856-3033930)
chr4 (327-381)||(8840238-8840292)
chr4 (308-381)||(20352026-20352100)
chr4 (308-381)||(23417198-23417272)
chr4 (327-381)||(35046217-35046270)
chr4 (308-381)||(54921376-54921450)
chr4 (321-381)||(7487074-7487135)
chr4 (320-381)||(13534721-13534782)
chr4 (308-381)||(30114392-30114465)
chr4 (310-378)||(30823697-30823766)
chr4 (317-381)||(49970380-49970445)
chr4 (341-378)||(51940878-51940915)
chr4 (321-381)||(49873561-49873621)
chr4 (310-381)||(49875720-49875792)
[»] chr7 (36 HSPs)
chr7 (306-378)||(47251964-47252036)
chr7 (310-381)||(47505675-47505746)
chr7 (307-381)||(33982598-33982672)
chr7 (308-381)||(41405938-41406011)
chr7 (306-377)||(19063902-19063974)
chr7 (305-381)||(586165-586241)
chr7 (305-381)||(48684574-48684650)
chr7 (311-378)||(38224340-38224407)
chr7 (320-381)||(38229772-38229833)
chr7 (317-381)||(43545172-43545236)
chr7 (302-381)||(41287547-41287626)
chr7 (327-381)||(37624150-37624204)
chr7 (308-381)||(1602402-1602475)
chr7 (308-381)||(23592538-23592611)
chr7 (310-381)||(9659011-9659082)
chr7 (310-381)||(17286327-17286398)
chr7 (343-381)||(1598928-1598966)
chr7 (308-381)||(16273908-16273982)
chr7 (327-381)||(37708368-37708422)
chr7 (305-381)||(4861908-4861985)
chr7 (309-381)||(44456896-44456969)
chr7 (317-381)||(33246747-33246811)
chr7 (315-381)||(20119879-20119946)
chr7 (346-381)||(33979400-33979435)
chr7 (322-381)||(41408171-41408230)
chr7 (308-381)||(41338278-41338352)
chr7 (315-381)||(44882577-44882643)
chr7 (343-381)||(47254754-47254792)
chr7 (320-381)||(584711-584772)
chr7 (320-381)||(9663697-9663758)
chr7 (320-381)||(21737442-21737502)
chr7 (308-381)||(21817357-21817429)
chr7 (320-381)||(42825614-42825675)
chr7 (308-380)||(8391439-8391511)
chr7 (310-381)||(40013623-40013695)
chr7 (310-381)||(47906947-47907019)
[»] chr1 (25 HSPs)
chr1 (309-381)||(44299066-44299138)
chr1 (308-381)||(43847735-43847807)
chr1 (327-381)||(4640377-4640431)
chr1 (308-381)||(11757148-11757221)
chr1 (306-381)||(44110209-44110284)
chr1 (310-381)||(35956300-35956371)
chr1 (308-381)||(4638151-4638222)
chr1 (320-381)||(23264136-23264197)
chr1 (307-380)||(36732471-36732544)
chr1 (309-381)||(5328850-5328922)
chr1 (308-381)||(31032059-31032133)
chr1 (308-357)||(23258839-23258888)
chr1 (309-381)||(30301000-30301070)
chr1 (308-381)||(52407376-52407448)
chr1 (321-381)||(29522053-29522113)
chr1 (310-381)||(7557507-7557578)
chr1 (310-381)||(12769620-12769691)
chr1 (315-381)||(25655672-25655738)
chr1 (308-381)||(33706553-33706627)
chr1 (307-381)||(35954144-35954218)
chr1 (316-381)||(9132863-9132928)
chr1 (316-381)||(30303086-30303151)
chr1 (308-381)||(33004463-33004536)
chr1 (321-381)||(7556108-7556168)
chr1 (321-381)||(35954238-35954298)
[»] chr2 (35 HSPs)
chr2 (310-381)||(519690-519761)
chr2 (310-381)||(38932514-38932585)
chr2 (310-381)||(24457845-24457916)
chr2 (307-381)||(33182845-33182919)
chr2 (308-381)||(36603008-36603081)
chr2 (306-377)||(21191852-21191924)
chr2 (310-381)||(6319287-6319358)
chr2 (310-380)||(10455678-10455748)
chr2 (308-381)||(20919093-20919165)
chr2 (317-381)||(21178548-21178612)
chr2 (314-381)||(14452057-14452124)
chr2 (307-381)||(7575624-7575697)
chr2 (308-381)||(27477707-27477780)
chr2 (310-381)||(7296632-7296703)
chr2 (307-381)||(1053133-1053207)
chr2 (310-380)||(2290386-2290456)
chr2 (320-381)||(24460792-24460853)
chr2 (320-381)||(39159856-39159917)
chr2 (320-381)||(39209277-39209338)
chr2 (343-381)||(14454638-14454676)
chr2 (327-381)||(20919943-20919997)
chr2 (343-381)||(27479137-27479175)
chr2 (327-381)||(27549696-27549750)
chr2 (320-381)||(6322417-6322478)
chr2 (320-381)||(18248660-18248721)
chr2 (307-376)||(24520479-24520548)
chr2 (316-381)||(28391942-28392007)
chr2 (329-381)||(15400920-15400972)
chr2 (346-381)||(33178745-33178780)
chr2 (343-381)||(518074-518112)
chr2 (311-381)||(3849795-3849865)
chr2 (316-381)||(3907044-3907110)
chr2 (316-381)||(14006189-14006255)
chr2 (328-381)||(42080888-42080941)
chr2 (321-381)||(27551737-27551797)
[»] chr5 (33 HSPs)
chr5 (311-381)||(3033069-3033139)
chr5 (309-381)||(7179660-7179732)
chr5 (320-381)||(15524123-15524184)
chr5 (308-381)||(15527275-15527348)
chr5 (306-378)||(5102987-5103059)
chr5 (310-381)||(6720884-6720955)
chr5 (327-381)||(6719494-6719548)
chr5 (307-381)||(9985358-9985432)
chr5 (320-381)||(5099860-5099921)
chr5 (308-381)||(27552665-27552738)
chr5 (309-381)||(31547465-31547538)
chr5 (310-381)||(34402152-34402222)
chr5 (309-377)||(29388962-29389031)
chr5 (316-381)||(34857951-34858016)
chr5 (315-381)||(9591612-9591679)
chr5 (314-381)||(15527416-15527483)
chr5 (307-381)||(39590712-39590787)
chr5 (316-381)||(27020215-27020281)
chr5 (311-381)||(37256386-37256456)
chr5 (301-381)||(822811-822892)
chr5 (345-381)||(8520282-8520318)
chr5 (310-381)||(37938494-37938566)
chr5 (320-379)||(8526292-8526351)
chr5 (307-381)||(9593830-9593905)
chr5 (307-381)||(12501404-12501479)
chr5 (316-381)||(745735-745801)
chr5 (343-381)||(3036408-3036446)
chr5 (308-381)||(27018122-27018196)
chr5 (320-377)||(29390984-29391042)
chr5 (315-381)||(34401517-34401583)
chr5 (320-381)||(19505044-19505105)
chr5 (309-381)||(30128626-30128699)
chr5 (316-381)||(37270247-37270312)
[»] chr8 (39 HSPs)
chr8 (315-381)||(15825915-15825981)
chr8 (312-381)||(15825071-15825140)
chr8 (307-379)||(35019234-35019306)
chr8 (305-381)||(45407240-45407316)
chr8 (308-381)||(39070303-39070376)
chr8 (308-381)||(39859943-39860016)
chr8 (310-381)||(38576588-38576659)
chr8 (308-381)||(31643025-31643097)
chr8 (308-381)||(42647300-42647373)
chr8 (310-381)||(6096827-6096898)
chr8 (315-381)||(38362421-38362487)
chr8 (307-381)||(40618491-40618565)
chr8 (308-376)||(23625647-23625718)
chr8 (308-381)||(29725488-29725561)
chr8 (308-381)||(40302414-40302487)
chr8 (308-381)||(16097608-16097682)
chr8 (308-381)||(26965364-26965438)
chr8 (320-381)||(41671481-41671542)
chr8 (306-381)||(18957400-18957476)
chr8 (316-381)||(276585-276651)
chr8 (308-381)||(278727-278801)
chr8 (308-381)||(637051-637125)
chr8 (316-381)||(639198-639264)
chr8 (308-381)||(822854-822928)
chr8 (316-381)||(825004-825070)
chr8 (308-381)||(3703168-3703242)
chr8 (316-381)||(4622889-4622955)
chr8 (308-381)||(17946583-17946657)
chr8 (308-381)||(23345171-23345245)
chr8 (343-381)||(26951290-26951328)
chr8 (316-381)||(27911889-27911955)
chr8 (316-381)||(27958308-27958374)
chr8 (344-381)||(5588106-5588143)
chr8 (328-381)||(23627516-23627569)
chr8 (321-381)||(25583751-25583812)
chr8 (308-381)||(30112176-30112249)
chr8 (305-381)||(38059240-38059317)
chr8 (316-381)||(41544844-41544909)
chr8 (310-381)||(4621484-4621556)
[»] scaffold0208 (1 HSPs)
scaffold0208 (308-381)||(3860-3933)
[»] scaffold0014 (1 HSPs)
scaffold0014 (310-381)||(71829-71900)
[»] chr6 (18 HSPs)
chr6 (310-381)||(5090363-5090434)
chr6 (303-381)||(24158982-24159060)
chr6 (309-379)||(34574872-34574942)
chr6 (305-381)||(13866011-13866085)
chr6 (302-381)||(16922244-16922324)
chr6 (307-381)||(17557571-17557646)
chr6 (308-381)||(4587861-4587935)
chr6 (309-381)||(5686338-5686410)
chr6 (316-381)||(11837785-11837851)
chr6 (308-381)||(12782975-12783049)
chr6 (316-381)||(14103792-14103858)
chr6 (308-381)||(14105934-14106008)
chr6 (316-381)||(23580086-23580152)
chr6 (311-381)||(28580955-28581025)
chr6 (305-381)||(23582209-23582286)
chr6 (321-381)||(27782272-27782333)
chr6 (329-381)||(25109367-25109419)
chr6 (306-381)||(27784421-27784497)
[»] scaffold0779 (1 HSPs)
scaffold0779 (307-381)||(143-218)
[»] scaffold0009 (1 HSPs)
scaffold0009 (327-381)||(94683-94737)
[»] scaffold0006 (1 HSPs)
scaffold0006 (308-381)||(56487-56561)


Alignment Details
Target: chr3 (Bit Score: 369; Significance: 0; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 11 - 383
Target Start/End: Original strand, 31999518 - 31999890
Alignment:
Q  11 tatatacaataatggtacgtatagatagaaactatcacaattgtgttaatttacaaacgaagttcaagtcctctttcaaacaatatcaacgaaagcttag 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31999518 tatatacaataatggtacgtatagatagaaactatcacaattgtgttaatttacaaacgaagttcaagtcctctttcaaacaatatcaacgaaagcttag 31999617  T
Q  111 agaattagagagatagagaaagtggttcttatgcatttattttgagtgtgatattataatataaatggatcttaaaatgaacaaactcaacatataagca 210  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31999618 agaattagagagatagagaaaatggttcttatgcatttattttgagtgtgatattataatataaatggatcttaaaatgaacaaactcaacatataagca 31999717  T
Q  211 tgcatataaacaatcacaccatattttcatttataacttttaagtatatataataataacattatttaaaatttgtatccgatcatgatgatttattggt 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31999718 tgcatataaacaatcacaccatattttcatttataacttttaagtatatataataataacattatttaaaatttgtatccgatcatgatgatttattggt 31999817  T
Q  311 tttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaatta 383  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31999818 tttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaatta 31999890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 30 - 194
Target Start/End: Original strand, 32007791 - 32007955
Alignment:
Q  30 tatagatagaaactatcacaattgtgttaatttacaaa-cgaagttcaagtcctctttcaaacaatatcaacgaaagcttagagaattagagagatagag 128  Q
    |||| |||||||||||| || ||||| ||||||||||| | ||| |||||||||||||||||||||| ||| | ||||||||||||||||||||||  ||    
T  32007791 tatatatagaaactatctcagttgtgctaatttacaaaacaaagctcaagtcctctttcaaacaatagcaatgcaagcttagagaattagagagatgaag 32007890  T
Q  129 aaagtggttcttatgcatttattttgagtgtgatattataatataaatggatcttaaaatgaacaa 194  Q
    ||| |||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  32007891 aaaatggttcttacacatttattttgagtgtgatattataatataaatggat-ttaaaatgaacaa 32007955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 302 - 381
Target Start/End: Complemental strand, 22981472 - 22981393
Alignment:
Q  302 tttattggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||| ||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  22981472 tttaatggttttttctacattaccctgtcttgtttagaggatatttaccccttcaagatatcaaccaatcaaaacgtaat 22981393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 307 - 381
Target Start/End: Original strand, 50935459 - 50935533
Alignment:
Q  307 tggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||| |||||||||||||||||||||||| ||||    
T  50935459 tggttttttctacattaccctctcttgtttagagggtatttaccctttcaagatatcaaccaatcaaaatataat 50935533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 306 - 381
Target Start/End: Complemental strand, 42167618 - 42167543
Alignment:
Q  306 ttggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||||| ||||| |||||||||||   | |||||||||||||||||||||||||||||||||||||||    
T  42167618 ttggttttttctacgttaccctctcttgtttatgaggtatttaccccttcaagatatcaaccaatcaaaatgtaat 42167543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 310 - 381
Target Start/End: Original strand, 55135197 - 55135268
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||||| | ||||||||||||| |||||||||||||  ||||||||||||||||| ||||||||    
T  55135197 ttttttctacattatcctctcttgtttagaggatatttacccctaaaagatatcaaccaatcataatgtaat 55135268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 308 - 381
Target Start/End: Original strand, 7041569 - 7041641
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||||||| | ||||||||||||| | |||||| || |||||||||||||||||||||||||||||    
T  7041569 ggttttttctacattatcctctcttgtttagagg-tatttatcctttcaagatatcaaccaatcaaaatgtaat 7041641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 308 - 381
Target Start/End: Original strand, 37178242 - 37178315
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| |||||| |||||||||||||   |||| ||||||||| ||||||||||||||||||||||||    
T  37178242 ggttttttctaaattaccctctcttgtttagagcgtattaaccccttcatgatatcaaccaatcaaaatgtaat 37178315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 310 - 381
Target Start/End: Complemental strand, 38698867 - 38698796
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||| || |||||| ||||||||||||| |||||||||||  ||| ||||||||||||||||||||||||    
T  38698867 ttttttttagattaccctctcttgtttagaggatatttaccctctcatgatatcaaccaatcaaaatgtaat 38698796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 379
Target Start/End: Original strand, 43860468 - 43860539
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgta 379  Q
    |||||||||||  ||||| ||||||||||||  | |||||||||||| ||||||||||||||||||||||||    
T  43860468 ggttttttctaacttaccctctcttgtttaggaggtatttacccctttaagatatcaaccaatcaaaatgta 43860539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 310 - 381
Target Start/End: Complemental strand, 54410763 - 54410692
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||| |||||| | ||||||||||| | |||||||||||  ||||||||||||||||||||||||||    
T  54410763 ttttttctagattaccctatcttgtttagagggtatttacccctaaaagatatcaaccaatcaaaatgtaat 54410692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 307 - 377
Target Start/End: Original strand, 36465584 - 36465654
Alignment:
Q  307 tggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatg 377  Q
    |||||||||||| |||||| ||||||||||||| | ||||||||  ||||| |||||||||||||||||||    
T  36465584 tggttttttctagattaccctctcttgtttagagggtatttaccttttcaacatatcaaccaatcaaaatg 36465654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 320 - 381
Target Start/End: Complemental strand, 39132493 - 39132432
Alignment:
Q  320 attaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||| |||||||||||   ||||||||||||||||| |||||||||||||||||||||||    
T  39132493 attaccctctcttgtttaagggatatttaccccttcaaaatatcaaccaatcaaaatgtaat 39132432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 308 - 381
Target Start/End: Original strand, 48071722 - 48071795
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||| ||||||||| ||||||||||||  | ||||||||| || ||||||||||||||||||||| ||||    
T  48071722 ggttttttttacattaccctctcttgtttaggaggtatttacccttttaagatatcaaccaatcaaaatataat 48071795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 314 - 381
Target Start/End: Original strand, 3890777 - 3890844
Alignment:
Q  314 ttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||| |||||| | |||||||||||   |||||||||||||| ||||||||||||||||||||||||    
T  3890777 ttctagattaccctatcttgtttagagagtatttaccccttcatgatatcaaccaatcaaaatgtaat 3890844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 310 - 381
Target Start/End: Original strand, 6488922 - 6488993
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||||||| | | ||||||||  | |||||||||||||||||||||||||| ||||||| ||||    
T  6488922 ttttttctacattaccctattttgtttagggggtatttaccccttcaagatatcaaccagtcaaaatataat 6488993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 309 - 381
Target Start/End: Complemental strand, 41889772 - 41889698
Alignment:
Q  309 gttttttctacattaccgtctcttgtttagatgatattt--accccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||| ||||||||| ||||||||||||| | |||||  |||||||||| |||| ||||||||||||||||||    
T  41889772 gttttttttacattaccctctcttgtttagagggtatttttaccccttcaaaatattaaccaatcaaaatgtaat 41889698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 307 - 381
Target Start/End: Original strand, 31311665 - 31311739
Alignment:
Q  307 tggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||| |||||| |||||||||||||   |||||||||  ||| ||||| ||||||||||||||||||    
T  31311665 tggttttttctagattaccctctcttgtttagagcgtatttaccctctcatgatataaaccaatcaaaatgtaat 31311739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 327 - 381
Target Start/End: Complemental strand, 50938567 - 50938513
Alignment:
Q  327 tctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||||| | ||||||||| |||||||||||||||||| ||||||||||    
T  50938567 tctcttgtttagaaggtatttaccctttcaagatatcaaccaattaaaatgtaat 50938513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 320 - 381
Target Start/End: Original strand, 22977839 - 22977900
Alignment:
Q  320 attaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||| ||||||||||||  | ||||||||| || ||||||||||||||||||||||||||    
T  22977839 attaccctctcttgtttagggggtatttacccttttaagatatcaaccaatcaaaatgtaat 22977900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 310 - 381
Target Start/End: Original strand, 44841226 - 44841298
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||| ||||||||||||| |||||| | |||||  |||| ||| ||||||||||||||||||||||||    
T  44841226 ttttttctagattaccgtctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 44841298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 313 - 381
Target Start/End: Original strand, 50535960 - 50536028
Alignment:
Q  313 tttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||| |||||| ||||||||||| | | |||||||||  ||| ||||||||||||||||||||||||    
T  50535960 tttctaaattaccctctcttgtttatagggtatttaccctctcatgatatcaaccaatcaaaatgtaat 50536028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 329 - 380
Target Start/End: Complemental strand, 2229488 - 2229437
Alignment:
Q  329 tcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaa 380  Q
    ||||||||||| |||||||| || || |||||||||||||||||||||||||    
T  2229488 tcttgtttagaggatatttatccttttaagatatcaaccaatcaaaatgtaa 2229437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 381
Target Start/End: Complemental strand, 11123707 - 11123632
Alignment:
Q  307 tggttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||| |||||| |||||| |||||| | |||||  |||| ||| ||||||||||||||||||||||||    
T  11123707 tggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 11123632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 381
Target Start/End: Complemental strand, 23022087 - 23022012
Alignment:
Q  307 tggttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||| |||||| |||||| |||||| | |||||  |||| ||| ||||||||||||||||||||||||    
T  23022087 tggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 23022012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 381
Target Start/End: Original strand, 27330112 - 27330187
Alignment:
Q  307 tggttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||| |||||| |||||| |||||| | |||||  |||| ||| ||||||||||||||||||||||||    
T  27330112 tggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 27330187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 381
Target Start/End: Original strand, 30361644 - 30361715
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||| |||||| | ||||||||||| | |||||| ||||| | ||||||||||||| ||||||||||    
T  30361644 ttttttctagattaccctatcttgtttagaaggtatttatcccttaatgatatcaaccaattaaaatgtaat 30361715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 318 - 381
Target Start/End: Original strand, 39129068 - 39129130
Alignment:
Q  318 acattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||| | ||||||||||| | ||||||||| || ||||||||||||||||||||||||||    
T  39129068 acattaccctatcttgtttagagggtatttacccttt-aagatatcaaccaatcaaaatgtaat 39129130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 13243634 - 13243560
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| |||||| |||||| |||||| | |||||  |||| ||| ||||||||||||||||||||||||    
T  13243634 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 13243560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 381
Target Start/End: Complemental strand, 30043696 - 30043630
Alignment:
Q  316 ctacattaccgtctcttgtttagatgata-tttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||| ||||||||||||| | || |||||||  ||| ||||||||||||||||||||||||    
T  30043696 ctacattaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 30043630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 18763974 - 18763901
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| |||||| |||||| |||||| | |||||| ||  ||| |||||||||||||||| |||||||    
T  18763974 ggttttttctagattaccttctcttatttagagggtatttatcctctcatgatatcaaccaatcaagatgtaat 18763901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 320 - 381
Target Start/End: Complemental strand, 32001282 - 32001221
Alignment:
Q  320 attaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||| |||||| |||||  | ||||||||| ||||| |||||||||||||||||||||||    
T  32001282 attaccctctcttatttagggggtatttaccctttcaaaatatcaaccaatcaaaatgtaat 32001221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 381
Target Start/End: Complemental strand, 40908553 - 40908476
Alignment:
Q  305 attggttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| || |||||| |||||| |||||| | |||||  |||| ||| ||||||||||||||||||||||||    
T  40908553 attggttttttttagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 40908476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 381
Target Start/End: Original strand, 42876988 - 42877061
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||| |||||| || | ||||||||||    |||||||| |||||||||||||| |||||||||||||||    
T  42876988 ggttttttatacattcccctatcttgtttagggagtatttacctcttcaagatatcaatcaatcaaaatgtaat 42877061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 309 - 381
Target Start/End: Original strand, 45051738 - 45051811
Alignment:
Q  309 gttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||| |||| | |||||| |||||| |||||||  |||| ||| ||||||||||||||||||||||||    
T  45051738 gttttttctagattatcctctcttatttagaggatattttaccctctcatgatatcaaccaatcaaaatgtaat 45051811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 380
Target Start/End: Original strand, 51720860 - 51720932
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaa 380  Q
    ||||||||||| |||||| |||||| ||||||   |||||||||  ||| || ||||||||||||||||||||    
T  51720860 ggttttttctagattaccctctcttatttagagagtatttaccctctcatgaaatcaaccaatcaaaatgtaa 51720932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 310 - 381
Target Start/End: Complemental strand, 55219940 - 55219869
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||| |||||| |||||| |||||| | |||||||||  ||| ||||||||||||| |||| |||||    
T  55219940 ttttttctagattaccctctcttatttagagggtatttaccctctcatgatatcaaccaattaaaaagtaat 55219869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 381
Target Start/End: Complemental strand, 8852355 - 8852289
Alignment:
Q  316 ctacattaccgtctcttgtttagatgata-tttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||| ||||| ||||||||||||| |||| ||||| |  ||| ||||||||||||||||||||||||    
T  8852355 ctacgttaccctctcttgtttagaggataatttactctctcatgatatcaaccaatcaaaatgtaat 8852289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 374
Target Start/End: Complemental strand, 42828049 - 42827983
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaa 374  Q
    ||||||||||| |||||| ||| ||||||||| | |||||||||  ||| |||||||| ||||||||    
T  42828049 ggttttttctagattaccatcttttgtttagagggtatttaccctctcatgatatcaatcaatcaaa 42827983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 381
Target Start/End: Original strand, 43338222 - 43338288
Alignment:
Q  315 tctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||   ||||||||||| | || ||||||  ||| ||||||||||||||||||||||||    
T  43338222 tctacattacccaatcttgtttagagggtaattaccctctcatgatatcaaccaatcaaaatgtaat 43338288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 43359632 - 43359558
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttacc-ccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| |||||  | ||||| ||||  |||||||||| |||||||||||| || |||||||||||||||    
T  43359632 ggttttttctatattacactatcttgattaggggatatttacctccttcaagatattaatcaatcaaaatgtaat 43359558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 381
Target Start/End: Complemental strand, 44843403 - 44843337
Alignment:
Q  316 ctacattaccgtctcttgtttagatgata-tttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||| ||||| ||||||||||||| | || |||||||  ||| ||||||||||||||||||||||||    
T  44843403 ctacgttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 44843337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 53583765 - 53583691
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| |||||| |||||| |||||| | |||||   ||| ||| ||||||||||||||||||||||||    
T  53583765 ggttttttctagattaccctctcttatttagagggtattttatcctctcatgatatcaaccaatcaaaatgtaat 53583691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 381
Target Start/End: Original strand, 54409366 - 54409432
Alignment:
Q  315 tctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||| |||||| | ||||||||||  | ||||||||  |||||||||| ||||||||||||||||||    
T  54409366 tctagattaccctatcttgtttagggggtatttaccttttcaagatataaaccaatcaaaatgtaat 54409432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 381
Target Start/End: Original strand, 11121085 - 11121146
Alignment:
Q  321 ttaccgtctcttgtttagatgata-tttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||| ||||||||||||| | || |||||||  ||| ||||||||||||||||||||||||    
T  11121085 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 11121146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 381
Target Start/End: Original strand, 13213299 - 13213360
Alignment:
Q  321 ttaccgtctcttgtttagatgata-tttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||| ||||||||||||| | || |||||||  ||| ||||||||||||||||||||||||    
T  13213299 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 13213360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 381
Target Start/End: Original strand, 22731409 - 22731446
Alignment:
Q  344 atttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||| ||| ||||||||||||||||||||||||    
T  22731409 atttaccccctcatgatatcaaccaatcaaaatgtaat 22731446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 297
Target Start/End: Original strand, 29183304 - 29183369
Alignment:
Q  232 tattttcatttataacttttaagtatatataataataacattatttaaaatttgtatccgatcatg 297  Q
    |||||||||||  ||||||||| ||||||| |||| ||||| | |||||||||| |||||| ||||    
T  29183304 tattttcatttgaaacttttaactatatatgataacaacatcacttaaaatttgcatccgaccatg 29183369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 381
Target Start/End: Original strand, 37218168 - 37218241
Alignment:
Q  309 gttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||| || |||||| |||||| |||||| | |||||  |||| ||| ||||||||||||||||||||||||    
T  37218168 gttttttttagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 37218241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 381
Target Start/End: Original strand, 37785292 - 37785353
Alignment:
Q  321 ttaccgtctcttgtttagatgata-tttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||| ||||||||||||| | || |||||||  ||| ||||||||||||||||||||||||    
T  37785292 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 37785353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 381
Target Start/End: Complemental strand, 55136687 - 55136627
Alignment:
Q  320 attaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||| ||||||||||||  | |||||| || || ||||||||||||||||||||||||||    
T  55136687 attaccctctcttgtttagggg-tatttatccttttaagatatcaaccaatcaaaatgtaat 55136627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 341 - 381
Target Start/End: Original strand, 41888591 - 41888631
Alignment:
Q  341 gatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||| | |||||||||||||||||| ||||||||||    
T  41888591 gatatttacgcattcaagatatcaaccaattaaaatgtaat 41888631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 353 - 381
Target Start/End: Original strand, 43357894 - 43357922
Alignment:
Q  353 ttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||||||||||||||||||||    
T  43357894 ttcaagatatcaaccaatcaaaatgtaat 43357922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 381
Target Start/End: Original strand, 47910953 - 47911025
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgata-tttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||| |||| | |||||| |||||| | || |||||||  ||| ||||||||||||||||||||||||    
T  47910953 ttttttctagattatcctctcttatttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 47911025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 381
Target Start/End: Original strand, 50546473 - 50546545
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||| |||||| |||||| |||| | | |||||  |||| ||| ||||||||||||||||||||||||    
T  50546473 ttttttctagattaccctctcttatttatagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 50546545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 26923889 - 26923816
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  26923889 ggttttttctacattaccctctcttgtttagaggatatttaccacttcaagatatcaaccaatcaaaatgtaat 26923816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 7113930 - 7113857
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||| ||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  7113930 ggttttttctgcattaccctctcttgtttagagggtatttaccccttcaagatatcaaccaatcaaaatgtaat 7113857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 308 - 381
Target Start/End: Original strand, 47649399 - 47649472
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||||||||| | ||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  47649399 ggttttttctacattaccctatcttgtttagagggtatttaccccttcaagatatcaaccaatcaaaatgtaat 47649472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 10659234 - 10659162
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||||||||| |||||||||||||   ||||||||| |||||||||||||||||||||||||||||    
T  10659234 ggttttttctacattaccctctcttgtttagagagtatttaccc-ttcaagatatcaaccaatcaaaatgtaat 10659162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 10873379 - 10873307
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||||||||| |||||||||||||   ||||||||| |||||||||||||||||||||||||||||    
T  10873379 ggttttttctacattaccctctcttgtttagagagtatttaccc-ttcaagatatcaaccaatcaaaatgtaat 10873307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 381
Target Start/End: Original strand, 19869707 - 19869780
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||||||| | ||||||||||| | | ||||||||| |||||||||||||||||||||||||||||    
T  19869707 ggttttttctacattatcctctcttgtttatagggtatttaccctttcaagatatcaaccaatcaaaatgtaat 19869780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 310 - 381
Target Start/End: Original strand, 6504257 - 6504328
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||| ||||| ||||||||||||  | |||||||| ||||||||||||||||||||||||||||||    
T  6504257 ttttttctacgttaccctctcttgtttagggggtatttacctcttcaagatatcaaccaatcaaaatgtaat 6504328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 307 - 381
Target Start/End: Complemental strand, 14270174 - 14270101
Alignment:
Q  307 tggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||||| ||||| ||||||||||||  | ||||||||| |||||||||||||||||||||||||||||    
T  14270174 tggttttttctacgttaccctctcttgtttagggggtatttaccc-ttcaagatatcaaccaatcaaaatgtaat 14270101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 311 - 381
Target Start/End: Complemental strand, 24577986 - 24577916
Alignment:
Q  311 tttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||||||| ||||||||||| | | ||||||||| ||||||||||||||||||||||| |||||    
T  24577986 tttttctacattaccctctcttgtttatagggtatttaccctttcaagatatcaaccaatcaaaaggtaat 24577916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 307 - 381
Target Start/End: Complemental strand, 43304921 - 43304847
Alignment:
Q  307 tggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||| || |||||| ||||||||||||| | ||||||||| |||| ||||||||||||||||||||||||    
T  43304921 tggttttttttagattaccctctcttgtttagagggtatttaccctttcatgatatcaaccaatcaaaatgtaat 43304847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 43940456 - 43940382
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgata-tttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||||||||| ||||||||||||| | || |||||||||| |||||||||| |||||||||||||||    
T  43940456 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaat 43940382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 306 - 381
Target Start/End: Complemental strand, 34075038 - 34074963
Alignment:
Q  306 ttggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||||| |||||  ||||||||||| |   |||||||||||||| ||||||||||||||||||||||||    
T  34075038 ttggttttttctagattactctctcttgtttaaagtgtatttaccccttcatgatatcaaccaatcaaaatgtaat 34074963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 310 - 381
Target Start/End: Original strand, 47805597 - 47805668
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||| |||||| | ||||||||||| |||||||||||  ||| ||||||||||||||||||||||||    
T  47805597 ttttttctagattaccctatcttgtttagaggatatttaccctctcatgatatcaaccaatcaaaatgtaat 47805668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 381
Target Start/End: Original strand, 26917639 - 26917705
Alignment:
Q  315 tctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||| |||||| |||||||||||   ||||||||||| |||||||||||||||||||||||||||||    
T  26917639 tctagattaccctctcttgtttaagggatatttaccctttcaagatatcaaccaatcaaaatgtaat 26917705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 320 - 381
Target Start/End: Complemental strand, 38623676 - 38623615
Alignment:
Q  320 attaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||| ||||||||||||| | ||||||||| ||||||||||||| |||||||||||||||    
T  38623676 attaccctctcttgtttagagggtatttaccctttcaagatatcaatcaatcaaaatgtaat 38623615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 320 - 381
Target Start/End: Original strand, 48952788 - 48952849
Alignment:
Q  320 attaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||| ||||||||||||  | ||||||||| |||||||||||||||||||||||||||||    
T  48952788 attaccttctcttgtttagggggtatttaccctttcaagatatcaaccaatcaaaatgtaat 48952849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 320 - 381
Target Start/End: Complemental strand, 50792763 - 50792702
Alignment:
Q  320 attaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||| ||||||||||| | | ||||||||| |||||||||||||||||||||||||||||    
T  50792763 attaccttctcttgtttaaagggtatttaccctttcaagatatcaaccaatcaaaatgtaat 50792702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 305 - 381
Target Start/End: Complemental strand, 46719766 - 46719690
Alignment:
Q  305 attggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| || |||||| |||||| |||||| | |||||||||  ||| ||||||||||||||||||||||||    
T  46719766 attggttttttatagattaccctctcttatttagagggtatttaccctctcatgatatcaaccaatcaaaatgtaat 46719690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 322 - 381
Target Start/End: Original strand, 7111062 - 7111121
Alignment:
Q  322 taccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||| ||||||||||||| | ||||||||| |||||||||||||| ||||||||||||||    
T  7111062 taccctctcttgtttagagggtatttaccctttcaagatatcaactaatcaaaatgtaat 7111121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 320 - 381
Target Start/End: Complemental strand, 6506068 - 6506007
Alignment:
Q  320 attaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||| |||||||||||||  |||||||||  || ||||||||||||||||||||||||||    
T  6506068 attaccttctcttgtttagagaatatttacctttttaagatatcaaccaatcaaaatgtaat 6506007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 308 - 380
Target Start/End: Complemental strand, 7489334 - 7489261
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatattt-accccttcaagatatcaaccaatcaaaatgtaa 380  Q
    ||||||||||| |||||| |||||| |||||| | ||||| |||| |||| |||||||||||||||||||||||    
T  7489334 ggttttttctagattaccctctcttatttagagggtattttaccctttcatgatatcaaccaatcaaaatgtaa 7489261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 320 - 381
Target Start/End: Complemental strand, 19871297 - 19871237
Alignment:
Q  320 attaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||| ||||||||||||| | ||||||||| ||||| |||||||||||||||||||||||    
T  19871297 attaccctctcttgtttagagggtatttaccctttcaa-atatcaaccaatcaaaatgtaat 19871237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 381
Target Start/End: Complemental strand, 31624747 - 31624678
Alignment:
Q  312 ttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||| ||||| |||||| |||||| | ||||||||| || ||||||| ||||||||||||||||||    
T  31624747 ttttctactttaccctctcttatttagagggtatttacccttttaagatattaaccaatcaaaatgtaat 31624678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 315 - 383
Target Start/End: Original strand, 31309420 - 31309488
Alignment:
Q  315 tctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaatta 383  Q
    ||||||||||| ||||||||||||  | || ||||||  ||| ||||||||||||||||||||||||||    
T  31309420 tctacattaccctctcttgtttagggggtaattaccctctcatgatatcaaccaatcaaaatgtaatta 31309488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 381
Target Start/End: Original strand, 13530035 - 13530106
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||| |||||| | ||||||||||| | |||||||||  ||| ||||| ||||||||||||||||||    
T  13530035 ttttttctagattaccctatcttgtttagagggtatttaccctctcatgatataaaccaatcaaaatgtaat 13530106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 381
Target Start/End: Complemental strand, 16666732 - 16666661
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||| | |||||| |||||| |||||| | |||||||||  ||| ||||||||||||||||||||||||    
T  16666732 ttttttcaagattaccctctcttatttagaaggtatttaccctctcatgatatcaaccaatcaaaatgtaat 16666661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 381
Target Start/End: Original strand, 4652794 - 4652860
Alignment:
Q  316 ctacattaccgtctcttgtttagatgata-tttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||| ||||||||||||| | || |||||||  ||| ||||||||||||||||||||||||    
T  4652794 ctacattaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 4652860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 381
Target Start/End: Complemental strand, 8081269 - 8081203
Alignment:
Q  315 tctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||| |||||| ||||||||||||  | ||||||||  |||||||||||||||||| ||||||||||    
T  8081269 tctagattaccctctcttgtttagggggtatttaccatttcaagatatcaaccaattaaaatgtaat 8081203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 382
Target Start/End: Original strand, 30112170 - 30112232
Alignment:
Q  320 attaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaatt 382  Q
    |||||| ||||||||||| | | ||||||||| ||||| ||||||||||||||||||| ||||    
T  30112170 attaccctctcttgtttatagggtatttaccctttcaaaatatcaaccaatcaaaatgcaatt 30112232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 381
Target Start/End: Original strand, 34072860 - 34072926
Alignment:
Q  315 tctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||| ||||| ||||||||||||| | || ||||||  ||| ||||||||||||||||||||||||    
T  34072860 tctacgttaccctctcttgtttagagggtaattaccctctcatgatatcaaccaatcaaaatgtaat 34072926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 381
Target Start/End: Original strand, 41039572 - 41039646
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| |||||| |||||| |||||| | |||||  |||| ||| ||||||||||||||||||||||||    
T  41039572 ggttttttctagattaccctctcttatttagaaggtattttaccctctcatgatatcaaccaatcaaaatgtaat 41039646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 381
Target Start/End: Complemental strand, 41041665 - 41041599
Alignment:
Q  316 ctacattaccgtctcttgtttagatgata-tttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||| ||||||||||||| | || |||||||  ||| ||||||||||||||||||||||||    
T  41041665 ctacattaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 41041599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 52449410 - 52449336
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| |||||| ||| || |||||| |||||||  |||| ||| ||||||||||||||||||||||||    
T  52449410 ggttttttctagattaccctctgttatttagaagatattttaccctctcatgatatcaaccaatcaaaatgtaat 52449336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 377
Target Start/End: Original strand, 16664490 - 16664551
Alignment:
Q  316 ctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatg 377  Q
    |||| ||||| ||||||||||||| |||| ||||||  ||| ||||||||||||||||||||    
T  16664490 ctacgttaccctctcttgtttagaggataattaccctctcatgatatcaaccaatcaaaatg 16664551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 381
Target Start/End: Complemental strand, 20787263 - 20787198
Alignment:
Q  316 ctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||| ||||| ||||||||||||| |  ||||||||  ||| ||||||||||||||||||||||||    
T  20787263 ctacgttaccctctcttgtttagaggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 20787198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 381
Target Start/End: Complemental strand, 31292823 - 31292758
Alignment:
Q  316 ctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||| ||||| ||||||||||||| | || ||||||  ||| ||||||||||||||||||||||||    
T  31292823 ctacgttaccctctcttgtttagagggtaattaccctctcatgatatcaaccaatcaaaatgtaat 31292758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 310 - 381
Target Start/End: Complemental strand, 8941301 - 8941229
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||| |||||| |||||| |||||| | |||||  |||| ||| ||||||||||||||||||||||||    
T  8941301 ttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 8941229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 381
Target Start/End: Original strand, 23931586 - 23931662
Alignment:
Q  305 attggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||| ||||||| |||||| ||||||||||||| | ||||||| |  | | ||||||||| ||||||||||||||    
T  23931586 attggtattttctagattaccctctcttgtttagagggtatttactctcttatgatatcaacaaatcaaaatgtaat 23931662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 381
Target Start/End: Original strand, 35044897 - 35044957
Alignment:
Q  321 ttaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||| || |||||||||| |||| ||| |  |||||||||||||||||||||||||||||    
T  35044897 ttaccctcacttgtttagaggataattatcatttcaagatatcaaccaatcaaaatgtaat 35044957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 310 - 381
Target Start/End: Original strand, 17518858 - 17518929
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||| |||||| ||||||||||||| | |||||||||  ||| |||| ||  |||||||||||||||    
T  17518858 ttttttctagattaccctctcttgtttagacggtatttaccctctcatgataccagtcaatcaaaatgtaat 17518929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 381
Target Start/End: Complemental strand, 42180264 - 42180217
Alignment:
Q  334 tttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||| | |||||| ||||||| ||||||||||||||||||||||||    
T  42180264 tttagagggtatttatcccttcatgatatcaaccaatcaaaatgtaat 42180217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 381
Target Start/End: Original strand, 3033856 - 3033930
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||  ||||| |||||| |||| |||||||||  |||| ||| ||||||||||||||||||| ||||    
T  3033856 ggttttttctagcttaccctctcttatttatatgatattttaccctctcatgatatcaaccaatcaaaatataat 3033930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 381
Target Start/End: Original strand, 8840238 - 8840292
Alignment:
Q  327 tctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||   | ||||||||| ||||||||||||| |||||||||||||||    
T  8840238 tctcttgtttaaggggtatttaccctttcaagatatcaatcaatcaaaatgtaat 8840292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 381
Target Start/End: Original strand, 20352026 - 20352100
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| |||||| |||||| ||||||   |||||  |||| ||| ||||||||||||||||||||||||    
T  20352026 ggttttttctagattaccctctcttatttagagagtattttaccctctcatgatatcaaccaatcaaaatgtaat 20352100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 381
Target Start/End: Original strand, 23417198 - 23417272
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||| ||| |||||| |||||| |||||| | |||||  |||| ||| ||||||||||||||||||||||||    
T  23417198 ggtttttgctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 23417272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 381
Target Start/End: Complemental strand, 35046270 - 35046217
Alignment:
Q  327 tctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||||| | |||||| |||| || ||||||||||||||||||||||||    
T  35046270 tctcttgtttagagggtatttatccct-catgatatcaaccaatcaaaatgtaat 35046217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 54921450 - 54921376
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| |||||| |||||| |||||| | |||||  |||| |||  |||||||||||||||||||||||    
T  54921450 ggttttttctagattaccctctcttatttagagggtattttaccctctcataatatcaaccaatcaaaatgtaat 54921376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 381
Target Start/End: Original strand, 7487074 - 7487135
Alignment:
Q  321 ttaccgtctcttgtttagatgata-tttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||| ||||||||||||| | || |||||||  ||| ||||||||||||||||||||||||    
T  7487074 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 7487135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 381
Target Start/End: Complemental strand, 13534782 - 13534721
Alignment:
Q  320 attaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||| ||||||||||||| | || |||| |  ||| ||||||||||||||||||||||||    
T  13534782 attaccctctcttgtttagagggtaattactctctcatgatatcaaccaatcaaaatgtaat 13534721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 30114465 - 30114392
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| |||| | |||||| ||||   | |||||||||||| ||||||| ||||||||||||| ||||    
T  30114465 ggttttttctatattaacttctcttatttaagaggtatttacccctttaagatattaaccaatcaaaatataat 30114392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 378
Target Start/End: Original strand, 30823697 - 30823766
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgt 378  Q
    ||||||||| |||||| |||||| |||||| | |||||  |||| ||| |||||||||||||||||||||    
T  30823697 ttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgt 30823766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 381
Target Start/End: Complemental strand, 49970445 - 49970380
Alignment:
Q  317 tacattaccgtctcttgtttagatgata-tttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||| ||||||||||||| | || |||||||  ||| |||||||| |||||||||||||||    
T  49970445 tacattaccttctcttgtttagagggtaatttaccctctcatgatatcaatcaatcaaaatgtaat 49970380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Original strand, 51940878 - 51940915
Alignment:
Q  341 gatatttaccccttcaagatatcaaccaatcaaaatgt 378  Q
    |||||||| |||||||||||||||| ||||||||||||    
T  51940878 gatatttatcccttcaagatatcaatcaatcaaaatgt 51940915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 381
Target Start/End: Original strand, 49873561 - 49873621
Alignment:
Q  321 ttaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||| |||||| |||||||| || |||| |  ||| ||||||||||||||||||||||||    
T  49873561 ttaccctctcttttttagatggtaattactctctcatgatatcaaccaatcaaaatgtaat 49873621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 381
Target Start/End: Complemental strand, 49875792 - 49875720
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||| || |||||| ||||||||||||| | |||||  || | ||| ||||||||||||||||||||||||    
T  49875792 ttttttttagattaccctctcttgtttagagggtattttaccttctcatgatatcaaccaatcaaaatgtaat 49875720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 1e-23; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 306 - 378
Target Start/End: Original strand, 47251964 - 47252036
Alignment:
Q  306 ttggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgt 378  Q
    |||||||||||||||||||| ||||||||||||  | ||||||||||||||||||||||||||||||||||||    
T  47251964 ttggttttttctacattaccctctcttgtttagggggtatttaccccttcaagatatcaaccaatcaaaatgt 47252036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 310 - 381
Target Start/End: Complemental strand, 47505746 - 47505675
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  47505746 ttttttctagattaccctctcttgtttagaggatatttaccccttcatgatatcaaccaatcaaaatgtaat 47505675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 307 - 381
Target Start/End: Complemental strand, 33982672 - 33982598
Alignment:
Q  307 tggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||||||||||||| |||||||||||||| ||||    
T  33982672 tggttttttctacattaccctctcttgtttagagggtatttaccccttcaagataccaaccaatcaaaatataat 33982598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 308 - 381
Target Start/End: Original strand, 41405938 - 41406011
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||||||||| ||||||||||||  | |||||| ||||||||||||||||||||||||||||||||    
T  41405938 ggttttttctacattaccctctcttgtttagggggtatttatcccttcaagatatcaaccaatcaaaatgtaat 41406011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 306 - 377
Target Start/End: Original strand, 19063902 - 19063974
Alignment:
Q  306 ttggttttttctacattaccgtctcttgtttagatgata-tttaccccttcaagatatcaaccaatcaaaatg 377  Q
    |||||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||||||    
T  19063902 ttggttttttctacattaccctctcttgtttagaggatattttaccctttcaagatatcaaccaatcaaaatg 19063974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 305 - 381
Target Start/End: Complemental strand, 586241 - 586165
Alignment:
Q  305 attggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||||||||||||  |||||| ||||   | |||||||||||||||||||||||||||||||||||||||    
T  586241 attggttttttctacattactctctcttatttatggggtatttaccccttcaagatatcaaccaatcaaaatgtaat 586165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 305 - 381
Target Start/End: Complemental strand, 48684650 - 48684574
Alignment:
Q  305 attggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||||| |||||| |||||| |||||| ||||||||||| || | ||||||||||||||||||||||||    
T  48684650 attggttttttctagattaccctctcttatttagaggatatttacccttttatgatatcaaccaatcaaaatgtaat 48684574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 311 - 378
Target Start/End: Original strand, 38224340 - 38224407
Alignment:
Q  311 tttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgt 378  Q
    ||||||||||||||  | ||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  38224340 tttttctacattactctatcttgtttagaggatatttatcccttcaagatatcaaccaatcaaaatgt 38224407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 320 - 381
Target Start/End: Complemental strand, 38229833 - 38229772
Alignment:
Q  320 attaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||| ||||||||||||| | ||||||||| |||||||||||||||||||||||||||||    
T  38229833 attaccatctcttgtttagagggtatttaccctttcaagatatcaaccaatcaaaatgtaat 38229772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 317 - 381
Target Start/End: Complemental strand, 43545236 - 43545172
Alignment:
Q  317 tacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||| |||||||||||   ||||||||||||||||| |||||||||||||||||||||||    
T  43545236 tacattaccctctcttgtttatgagatatttaccccttcaaaatatcaaccaatcaaaatgtaat 43545172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 302 - 381
Target Start/End: Original strand, 41287547 - 41287626
Alignment:
Q  302 tttattggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||||||||| || ||| ||||||||||||| | |||||||||  ||| ||||||||| ||||||||||||||    
T  41287547 tttattggttttttctagataaccctctcttgtttagagggtatttaccctctcatgatatcaactaatcaaaatgtaat 41287626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 327 - 381
Target Start/End: Complemental strand, 37624204 - 37624150
Alignment:
Q  327 tctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||||  | ||||||||| |||||||||||||||||||||||||||||    
T  37624204 tctcttgtttagggggtatttaccctttcaagatatcaaccaatcaaaatgtaat 37624150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 1602475 - 1602402
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||||||||| ||| ||||||| | | ||||||  |||| |||||||||| |||||||||||||||    
T  1602475 ggttttttctacattaccctcttttgtttatagggtatttattcctttaagatatcaatcaatcaaaatgtaat 1602402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 308 - 381
Target Start/End: Original strand, 23592538 - 23592611
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| |||||| |||||| |||||| | |||||| || |||| |||||||| |||||||||||||||    
T  23592538 ggttttttctagattaccctctcttatttagagggtatttatcctttcatgatatcaatcaatcaaaatgtaat 23592611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 381
Target Start/End: Original strand, 9659011 - 9659082
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||| |||||| | ||||||||||| | |||||||||  ||| ||||| ||||||||||||||||||    
T  9659011 ttttttctagattaccctatcttgtttagagggtatttaccctctcatgatataaaccaatcaaaatgtaat 9659082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 381
Target Start/End: Original strand, 17286327 - 17286398
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||| || |||||| ||||||||||||| | |||||||||  ||| |||||||| |||||||||||||||    
T  17286327 ttttttttagattaccctctcttgtttagagggtatttaccctctcatgatatcaatcaatcaaaatgtaat 17286398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 343 - 381
Target Start/End: Original strand, 1598928 - 1598966
Alignment:
Q  343 tatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  1598928 tatttaccctttcaagatatcaaccaatcaaaatgtaat 1598966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 381
Target Start/End: Original strand, 16273908 - 16273982
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| |||||| |||||| |||||| | |||||  |||| ||| ||||||||||||||||||||||||    
T  16273908 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 16273982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 381
Target Start/End: Complemental strand, 37708422 - 37708368
Alignment:
Q  327 tctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||||| | ||||||| | || ||||||||||||||||||||||||||    
T  37708422 tctcttgtttagagggtatttactcttttaagatatcaaccaatcaaaatgtaat 37708368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 381
Target Start/End: Complemental strand, 4861985 - 4861908
Alignment:
Q  305 attggttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||||| |||||| |||||| |||||| | |||||  | || ||| ||||||||||||||||||||||||    
T  4861985 attggttttttctagattaccctctcttatttagagggtattttactctctcatgatatcaaccaatcaaaatgtaat 4861908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 309 - 381
Target Start/End: Original strand, 44456896 - 44456969
Alignment:
Q  309 gttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||| |||||| |||||| |||||| | |||||  |||| ||| ||||||||||||||||||||||||    
T  44456896 gttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 44456969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 381
Target Start/End: Complemental strand, 33246811 - 33246747
Alignment:
Q  317 tacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||| ||||||||||||| |  |||||| |  ||| ||||||||||||||||||||||||    
T  33246811 tacattaccctctcttgtttagaggtaatttactctctcatgatatcaaccaatcaaaatgtaat 33246747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 315 - 381
Target Start/End: Original strand, 20119879 - 20119946
Alignment:
Q  315 tctacattaccgtctcttgtttagatgata-tttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||| ||||| ||||||||||||| | || |||||||  ||| ||||||||||||||||||||||||    
T  20119879 tctacgttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 20119946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 346 - 381
Target Start/End: Original strand, 33979400 - 33979435
Alignment:
Q  346 ttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||| |||||||||||||||||||||||||||||    
T  33979400 ttaccctttcaagatatcaaccaatcaaaatgtaat 33979435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 322 - 381
Target Start/End: Complemental strand, 41408230 - 41408171
Alignment:
Q  322 taccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||| ||||||||||||| | | |||| || ||||| |||||||||||||||||||||||    
T  41408230 taccctctcttgtttagagggtgtttatcctttcaatatatcaaccaatcaaaatgtaat 41408171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 41338352 - 41338278
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| |||||| |||||| |||||| | |||||  || | ||| ||||||||||||||||||||||||    
T  41338352 ggttttttctagattaccctctcttatttagagggtattttaccttctcatgatatcaaccaatcaaaatgtaat 41338278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 381
Target Start/End: Original strand, 44882577 - 44882643
Alignment:
Q  315 tctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||  |||||||||||| |  ||||||||  | | ||||||||||||||||||||||||    
T  44882577 tctacattacccactcttgtttagaggtaatttaccctcttatgatatcaaccaatcaaaatgtaat 44882643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 343 - 381
Target Start/End: Complemental strand, 47254792 - 47254754
Alignment:
Q  343 tatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||| |||||||||||||||||||||||| ||||    
T  47254792 tatttaccctttcaagatatcaaccaatcaaaatataat 47254754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 381
Target Start/End: Original strand, 584711 - 584772
Alignment:
Q  320 attaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||| |||||||||||   | ||||||||| |||||||||| ||||||||||||| ||||    
T  584711 attaccctctcttgtttatggggtatttaccctttcaagatataaaccaatcaaaatataat 584772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 381
Target Start/End: Complemental strand, 9663758 - 9663697
Alignment:
Q  320 attaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||| ||||||||||||| | || |||| |  ||| ||||||||||||||||||||||||    
T  9663758 attaccctctcttgtttagagggtaattactctctcatgatatcaaccaatcaaaatgtaat 9663697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 381
Target Start/End: Complemental strand, 21737502 - 21737442
Alignment:
Q  320 attaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||| |||||| ||||| || |||||||||  ||| ||||||||||||||||||||||||    
T  21737502 attaccctctcttatttaggtg-tatttaccctctcatgatatcaaccaatcaaaatgtaat 21737442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 21817429 - 21817357
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||| ||||| |||||| |||||| |||||| | |||||  |||| || ||||||||||||||||||||||||    
T  21817429 ggtttcttctatattaccctctcttatttagagggtattttaccct-catgatatcaaccaatcaaaatgtaat 21817357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 381
Target Start/End: Original strand, 42825614 - 42825675
Alignment:
Q  320 attaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||| ||||||||||||   |||| ||||  || ||||||||||||||||||||||||||    
T  42825614 attaccctctcttgtttagggaatatatacctttttaagatatcaaccaatcaaaatgtaat 42825675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 380
Target Start/End: Original strand, 8391439 - 8391511
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaa 380  Q
    ||||||| ||| |||||| |||||||||||   | |||||| ||| ||| |||||||| ||||||||||||||    
T  8391439 ggtttttcctagattaccctctcttgtttatggggtatttatcccctcatgatatcaaacaatcaaaatgtaa 8391511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 381
Target Start/End: Original strand, 40013623 - 40013695
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||| |||||| |||||| |||||| | |||||  | || ||| ||||||||||||||||||||||||    
T  40013623 ttttttctagattaccctctcttatttagagggtattttactctctcatgatatcaaccaatcaaaatgtaat 40013695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 381
Target Start/End: Original strand, 47906947 - 47907019
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||| ||| || |||||| |||||| | |||||  |||| ||| ||||||||||||||||||||||||    
T  47906947 ttttttctagatttccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 47907019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 1e-23; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 309 - 381
Target Start/End: Original strand, 44299066 - 44299138
Alignment:
Q  309 gttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||||||||| ||||||||||||| | ||||||||||||||||||| |||||||||||||||||||    
T  44299066 gttttttctacattaccctctcttgtttagagggtatttaccccttcaagataccaaccaatcaaaatgtaat 44299138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 43847807 - 43847735
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||||||||| ||||||||||||  | |||||||| ||||||||||||||||||||||||||||||    
T  43847807 ggttttttctacattaccctctcttgtttagggg-tatttacctcttcaagatatcaaccaatcaaaatgtaat 43847735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 381
Target Start/End: Complemental strand, 4640431 - 4640377
Alignment:
Q  327 tctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  4640431 tctcttgtttagaggatatttaccctttcaagatatcaaccaatcaaaatgtaat 4640377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 11757221 - 11757148
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||||||||  | |||| |||||| | ||||||| |||||||||||||||||||||||||||||||    
T  11757221 ggttttttctacattacactttcttatttagaaggtatttacaccttcaagatatcaaccaatcaaaatgtaat 11757148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 306 - 381
Target Start/End: Complemental strand, 44110284 - 44110209
Alignment:
Q  306 ttggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||||||||||| | | || |||||| |||||||| |||||||||| |||||||||||||||| ||||    
T  44110284 ttggttttttctacattaccctattttatttagaggatatttatcccttcaagacatcaaccaatcaaaatataat 44110209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 310 - 381
Target Start/End: Complemental strand, 35956371 - 35956300
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||| |||||| ||||||||||||| | |||||||||  ||| ||||||||||||||||||| ||||    
T  35956371 ttttttctatattaccctctcttgtttagagggtatttaccctctcatgatatcaaccaatcaaaatataat 35956300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 308 - 381
Target Start/End: Original strand, 4638151 - 4638222
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||||||||  ||||||||||| | | ||||||||| || |||||||||| |||||||||||||||    
T  4638151 ggttttttctacattac--tctcttgtttatagggtatttaccctttaaagatatcaaacaatcaaaatgtaat 4638222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 320 - 381
Target Start/End: Complemental strand, 23264197 - 23264136
Alignment:
Q  320 attaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||| | ||||||||||  | ||||||||| |||||||||||||||||||||||||||||    
T  23264197 attaccctatcttgtttagggggtatttaccctttcaagatatcaaccaatcaaaatgtaat 23264136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 380
Target Start/End: Complemental strand, 36732544 - 36732471
Alignment:
Q  307 tggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaa 380  Q
    |||||||||||| |||||| || ||| |||||| | ||||||||| |||| ||||||||||||| |||||||||    
T  36732544 tggttttttctagattaccctcgcttatttagagggtatttaccctttcatgatatcaaccaattaaaatgtaa 36732471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 309 - 381
Target Start/End: Complemental strand, 5328922 - 5328850
Alignment:
Q  309 gttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||| || |||||| ||||||||||||  |  ||||||||||||| |||||||| |||||||||||||||    
T  5328922 gttttttttagattaccctctcttgtttagggggcatttaccccttcatgatatcaatcaatcaaaatgtaat 5328850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 31032133 - 31032059
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| |||||| |||||| |||||| | |||||  |||| ||| ||||||||||||||||||||||||    
T  31032133 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 31032059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 357
Target Start/End: Original strand, 23258839 - 23258888
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaa 357  Q
    |||||||||||||||||| ||||||||||||  |||||||| ||||||||    
T  23258839 ggttttttctacattaccctctcttgtttaggagatatttatcccttcaa 23258888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 309 - 381
Target Start/End: Original strand, 30301000 - 30301070
Alignment:
Q  309 gttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||| |||||| |||||| |||||| | ||||||||||  ||  |||||||||||||||||||||||    
T  30301000 gttttttctagattaccctctcttatttagagggtatttacccc--catcatatcaaccaatcaaaatgtaat 30301070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 52407448 - 52407376
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||| || |||||| ||||||| ||||  | |||||||||| ||| ||||||||||||||||||||||||    
T  52407448 ggttttttatagattaccctctcttggttagggg-tatttaccccctcatgatatcaaccaatcaaaatgtaat 52407376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 381
Target Start/End: Complemental strand, 29522113 - 29522053
Alignment:
Q  321 ttaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||| ||||||||||||| | || ||||||  ||| ||||||||||||||||||||||||    
T  29522113 ttaccctctcttgtttagagggtaattaccctgtcatgatatcaaccaatcaaaatgtaat 29522053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 310 - 381
Target Start/End: Complemental strand, 7557578 - 7557507
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||| |||||  |||||||| |||| | |||||||||  ||| ||||||||||||||||||| ||||    
T  7557578 ttttttctagattactctctcttgtctagagggtatttaccctctcatgatatcaaccaatcaaaatttaat 7557507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 310 - 381
Target Start/End: Complemental strand, 12769691 - 12769620
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||| |||||| ||||||||||||  ||| ||||||   ||| ||||||| ||||||||||||||||    
T  12769691 ttttttctagattaccctctcttgtttaggggatctttaccttctcatgatatcacccaatcaaaatgtaat 12769620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 381
Target Start/End: Original strand, 25655672 - 25655738
Alignment:
Q  315 tctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||| ||||| | ||||||||||| | || |||||| |||| |||||||| |||||||||||||||    
T  25655672 tctacgttaccctttcttgtttagagggtaattaccctttcatgatatcaatcaatcaaaatgtaat 25655738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 33706627 - 33706553
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| |||||| | |||| |||||| | |||||  |||| ||| ||||||||||||||||||||||||    
T  33706627 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 33706553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 381
Target Start/End: Original strand, 35954144 - 35954218
Alignment:
Q  307 tggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||| || |||||  ||| |||||||||   |||||||||  ||| ||||||||||||||||||||||||    
T  35954144 tggttttttttaaattactctcttttgtttagagagtatttaccctctcatgatatcaaccaatcaaaatgtaat 35954218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 381
Target Start/End: Original strand, 9132863 - 9132928
Alignment:
Q  316 ctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||| ||||||||||||  | || ||||||  ||| ||||| ||||||||||||||||||    
T  9132863 ctacattaccttctcttgtttaggaggtaattaccctctcatgatattaaccaatcaaaatgtaat 9132928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 381
Target Start/End: Complemental strand, 30303151 - 30303086
Alignment:
Q  316 ctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||| ||||| ||||||||||||  |||| ||| ||  ||| ||||||||||||||||||||||||    
T  30303151 ctacgttaccctctcttgtttaggggataattatcctctcatgatatcaaccaatcaaaatgtaat 30303086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 381
Target Start/End: Original strand, 33004463 - 33004536
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| |||||  ||||||||||||  | |||||||||  |||  |||||||| ||||||||||||||    
T  33004463 ggttttttctaaattactctctcttgtttagggggtatttaccctctcataatatcaactaatcaaaatgtaat 33004536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 381
Target Start/End: Original strand, 7556108 - 7556168
Alignment:
Q  321 ttaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||| ||||||||||||| | || ||||||  ||| |||||||| |||||||||||||||    
T  7556108 ttaccctctcttgtttagagggtaattaccctctcatgatatcaatcaatcaaaatgtaat 7556168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 381
Target Start/End: Original strand, 35954238 - 35954298
Alignment:
Q  321 ttaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||| ||||||||||||| | || ||||||  ||| |||||||||||||| |||||||||    
T  35954238 ttaccctctcttgtttagagggtaattaccctatcatgatatcaaccaatcgaaatgtaat 35954298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 4e-23; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 310 - 381
Target Start/End: Complemental strand, 519761 - 519690
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||||||| ||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  519761 ttttttctacattaccctctattgtttagatgatatttacctctttaagatatcaaccaatcaaaatgtaat 519690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 310 - 381
Target Start/End: Complemental strand, 38932585 - 38932514
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||||||| ||||||||||||| | ||||||| |||||||||||||||||||||||||||||||    
T  38932585 ttttttctacattaccctctcttgtttagagggtatttactccttcaagatatcaaccaatcaaaatgtaat 38932514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 310 - 381
Target Start/End: Original strand, 24457845 - 24457916
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||||||| ||||||||||||| | |||||||||||||||||||| |||||||||| |||||||    
T  24457845 ttttttctacattaccctctcttgtttagagggtatttaccccttcaagatattaaccaatcaagatgtaat 24457916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 307 - 381
Target Start/End: Complemental strand, 33182919 - 33182845
Alignment:
Q  307 tggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||||||||||| ||| || |||||||| |||||||||||| ||||||||||||||||||||| ||||    
T  33182919 tggttttttctacattaccctcttttatttagatggtatttacccctttaagatatcaaccaatcaaaatttaat 33182845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 36603081 - 36603008
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||||||||| |||||| |||| | | ||||||| |||||||||||||||||||||||||||||||    
T  36603081 ggttttttctacattaccctctcttatttaaaaggtatttactccttcaagatatcaaccaatcaaaatgtaat 36603008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 21191924 - 21191852
Alignment:
Q  306 ttggttttttctacattaccgtctcttgtttagatgata-tttaccccttcaagatatcaaccaatcaaaatg 377  Q
    |||||||||||||||||||| ||||||||||||| | || ||||||| |||||||||||||||||||||||||    
T  21191924 ttggttttttctacattaccctctcttgtttagagggtattttaccctttcaagatatcaaccaatcaaaatg 21191852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 310 - 381
Target Start/End: Original strand, 6319287 - 6319358
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||||||| ||||||||||||  |  |||||||||||||| |||||||||||||||||||||||    
T  6319287 ttttttctacattaccctctcttgtttagcggggatttaccccttcaaaatatcaaccaatcaaaatgtaat 6319358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 310 - 380
Target Start/End: Complemental strand, 10455748 - 10455678
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaa 380  Q
    |||||||||||||| | ||||||||||||| | |||||| ||||||||||||||||||||| |||||||||    
T  10455748 ttttttctacattatcctctcttgtttagagggtatttatcccttcaagatatcaaccaattaaaatgtaa 10455678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 308 - 381
Target Start/End: Original strand, 20919093 - 20919165
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||||||||| ||||||||||||| | |||||||| ||| |||||||||| |||||||||||||||    
T  20919093 ggttttttctacattacc-tctcttgtttagagggtatttacctctttaagatatcaatcaatcaaaatgtaat 20919165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 317 - 381
Target Start/End: Complemental strand, 21178612 - 21178548
Alignment:
Q  317 tacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||| |||||||||||||   |||||||||||||||||||||||| ||||||||||||||    
T  21178612 tacattaccctctcttgtttagagagtatttaccccttcaagatatcaactaatcaaaatgtaat 21178548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 314 - 381
Target Start/End: Original strand, 14452057 - 14452124
Alignment:
Q  314 ttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||| ||  ||||||||| | ||||||||| |||||||||||||||||||||||||||||    
T  14452057 ttctacattaccctcatttgtttagagggtatttacccattcaagatatcaaccaatcaaaatgtaat 14452124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 307 - 381
Target Start/End: Complemental strand, 7575697 - 7575624
Alignment:
Q  307 tggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||||||||||| ||||||||||||  | |||||| || |||| ||||||||||||||||||||||||    
T  7575697 tggttttttctacattaccctctcttgtttagggggtattta-cctttcatgatatcaaccaatcaaaatgtaat 7575624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 308 - 381
Target Start/End: Original strand, 27477707 - 27477780
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||||||||  ||||||||||||| | |||||||| ||  || |||||||||||||||||||||||    
T  27477707 ggttttttctacattactttctcttgtttagaaggtatttacctctaaaaaatatcaaccaatcaaaatgtaat 27477780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 310 - 381
Target Start/End: Complemental strand, 7296703 - 7296632
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||| |||| | ||||||||||||  | ||||||| ||||||||||||||| |||||||||||||||    
T  7296703 ttttttctatattatcctctcttgtttaggaggtatttactccttcaagatatcaatcaatcaaaatgtaat 7296632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 307 - 381
Target Start/End: Original strand, 1053133 - 1053207
Alignment:
Q  307 tggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||| |||||  ||||||||||||| | |||||||||  ||| ||||||||| ||||||||||||||    
T  1053133 tggttttttctagattactctctcttgtttagagggtatttaccctctcatgatatcaacaaatcaaaatgtaat 1053207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 310 - 380
Target Start/End: Original strand, 2290386 - 2290456
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaa 380  Q
    |||||| || |||||| ||||||||||||| | |||||||||  ||| |||||||||||||||||||||||    
T  2290386 ttttttttagattaccctctcttgtttagagggtatttaccctctcatgatatcaaccaatcaaaatgtaa 2290456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 320 - 381
Target Start/End: Complemental strand, 24460853 - 24460792
Alignment:
Q  320 attaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||| ||||||||||||  | ||||||||  |||||||||||||||||||||||||||||    
T  24460853 attaccctctcttgtttagggggtatttaccttttcaagatatcaaccaatcaaaatgtaat 24460792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 320 - 381
Target Start/End: Original strand, 39159856 - 39159917
Alignment:
Q  320 attaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||| |||||||||||||   ||||||||| || ||||||||||||||||||||||||||    
T  39159856 attaccctctcttgtttagagagtatttacccttttaagatatcaaccaatcaaaatgtaat 39159917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 320 - 381
Target Start/End: Complemental strand, 39209338 - 39209277
Alignment:
Q  320 attaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||| |||||||||||||   ||||||||| || ||||||||||||||||||||||||||    
T  39209338 attaccctctcttgtttagagagtatttacccttttaagatatcaaccaatcaaaatgtaat 39209277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 343 - 381
Target Start/End: Complemental strand, 14454676 - 14454638
Alignment:
Q  343 tatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  14454676 tatttaccctttcaagatatcaaccaatcaaaatgtaat 14454638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 381
Target Start/End: Complemental strand, 20919997 - 20919943
Alignment:
Q  327 tctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||||  | ||||||||| |||||||||||||| ||||||||||||||    
T  20919997 tctcttgtttaggaggtatttaccctttcaagatatcaactaatcaaaatgtaat 20919943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 343 - 381
Target Start/End: Complemental strand, 27479175 - 27479137
Alignment:
Q  343 tatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  27479175 tatttaccctttcaagatatcaaccaatcaaaatgtaat 27479137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 381
Target Start/End: Original strand, 27549696 - 27549750
Alignment:
Q  327 tctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||||||  |||||||||||| | ||||||||| ||||||||||||||    
T  27549696 tctcttgtttagattgtatttacccctttatgatatcaactaatcaaaatgtaat 27549750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 320 - 381
Target Start/End: Complemental strand, 6322478 - 6322417
Alignment:
Q  320 attaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||| |||||||||||||   ||||||||| || ||||||||||||||||||||| ||||    
T  6322478 attaccctctcttgtttagagagtatttacccttttaagatatcaaccaatcaaaatataat 6322417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 320 - 381
Target Start/End: Complemental strand, 18248721 - 18248660
Alignment:
Q  320 attaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||| | |||||||||||   ||||||||  |||||||||||||||||||||||||||||    
T  18248721 attaccctatcttgtttagagagtatttaccaattcaagatatcaaccaatcaaaatgtaat 18248660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 376
Target Start/End: Complemental strand, 24520548 - 24520479
Alignment:
Q  307 tggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaat 376  Q
    ||||||||||||  ||||| |||||||||||   | ||||||||| |||||||||||||| |||||||||    
T  24520548 tggttttttctatgttaccctctcttgtttatggggtatttacccgttcaagatatcaactaatcaaaat 24520479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 381
Target Start/End: Complemental strand, 28392007 - 28391942
Alignment:
Q  316 ctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||| ||||| ||||||||||||| |||| ||||||  ||| |||||||| |||||||||||||||    
T  28392007 ctacgttaccctctcttgtttagaggataattaccctctcatgatatcaatcaatcaaaatgtaat 28391942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 381
Target Start/End: Complemental strand, 15400972 - 15400920
Alignment:
Q  329 tcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| | |||||||||  ||| ||||||||||||||||||||||||    
T  15400972 tcttgtttagagggtatttaccctatcatgatatcaaccaatcaaaatgtaat 15400920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 346 - 381
Target Start/End: Original strand, 33178745 - 33178780
Alignment:
Q  346 ttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||| |||||||||||||||||||||||||||||    
T  33178745 ttaccctttcaagatatcaaccaatcaaaatgtaat 33178780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 343 - 381
Target Start/End: Original strand, 518074 - 518112
Alignment:
Q  343 tatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||| ||||||||||||| |||||||||||||||    
T  518074 tatttaccctttcaagatatcaatcaatcaaaatgtaat 518112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 381
Target Start/End: Original strand, 3849795 - 3849865
Alignment:
Q  311 tttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||| |||||| ||||||||||| | | ||||||  |  ||| ||||||||||||||||||||||||    
T  3849795 tttttctagattaccctctcttgtttaaagggtatttatactctcatgatatcaaccaatcaaaatgtaat 3849865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 381
Target Start/End: Complemental strand, 3907110 - 3907044
Alignment:
Q  316 ctacattaccgtctcttgtttagatgata-tttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||  ||||||||||||| | || |||||||  ||| ||||||||||||||||||||||||    
T  3907110 ctacattacactctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 3907044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 381
Target Start/End: Complemental strand, 14006255 - 14006189
Alignment:
Q  316 ctacattaccgtctcttgtttagatgata-tttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||| ||||||||| ||| | || |||||||  ||| ||||||||||||||||||||||||    
T  14006255 ctacattaccctctcttgttaagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 14006189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 328 - 381
Target Start/End: Complemental strand, 42080941 - 42080888
Alignment:
Q  328 ctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||   |||| |||||| |||| ||||||||||||||||||||||||    
T  42080941 ctcttgtttaagggataattaccctttcatgatatcaaccaatcaaaatgtaat 42080888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 381
Target Start/End: Complemental strand, 27551797 - 27551737
Alignment:
Q  321 ttaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||| ||||||||||||| | || ||||||  ||  ||||||||||||||||||||||||    
T  27551797 ttaccctctcttgtttagagggtaattaccctctcctgatatcaaccaatcaaaatgtaat 27551737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 2e-22; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 311 - 381
Target Start/End: Original strand, 3033069 - 3033139
Alignment:
Q  311 tttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||||||| ||||||||||||| | ||||||||||||||| |||||||||||||||||||||||    
T  3033069 tttttctacattaccctctcttgtttagagggtatttaccccttcaaaatatcaaccaatcaaaatgtaat 3033139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 381
Target Start/End: Original strand, 7179660 - 7179732
Alignment:
Q  309 gttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||| |||||| ||||||||||||| | |||||||||||||| ||||||||||||||||||||||||    
T  7179660 gttttttctagattaccctctcttgtttagagggtatttaccccttcatgatatcaaccaatcaaaatgtaat 7179732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 320 - 381
Target Start/End: Original strand, 15524123 - 15524184
Alignment:
Q  320 attaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  15524123 attaccttctcttgtttagaggatatttaccctttcaagatatcaaccaatcaaaatgtaat 15524184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 15527348 - 15527275
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||||||||  |||||||| |||| | ||||||||| |||||||||||||||||||||||||||||    
T  15527348 ggttttttctacattactctctcttgtctagagggtatttaccctttcaagatatcaaccaatcaaaatgtaat 15527275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 306 - 378
Target Start/End: Complemental strand, 5103059 - 5102987
Alignment:
Q  306 ttggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgt 378  Q
    ||||||||||| |||||||| |||||||||||   | ||||||||||||||||||||||||||||||||||||    
T  5103059 ttggttttttcaacattaccctctcttgtttatggggtatttaccccttcaagatatcaaccaatcaaaatgt 5102987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 310 - 381
Target Start/End: Complemental strand, 6720955 - 6720884
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||||||| | ||||||||||| | |||||| |||||||||||||||| |||||||||||||||    
T  6720955 ttttttctacattaccctatcttgtttagagggtatttatcccttcaagatatcaatcaatcaaaatgtaat 6720884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 327 - 381
Target Start/End: Original strand, 6719494 - 6719548
Alignment:
Q  327 tctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||||  ||||||||||| |||||||||||||||||||||||||||||    
T  6719494 tctcttgtttaggggatatttaccctttcaagatatcaaccaatcaaaatgtaat 6719548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 307 - 381
Target Start/End: Original strand, 9985358 - 9985432
Alignment:
Q  307 tggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||| |||||| ||||||||||||| | ||||||| | |||| ||||||||| ||||||||||||||    
T  9985358 tggttttttctaaattaccctctcttgtttagagggtatttactcattcatgatatcaactaatcaaaatgtaat 9985432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 320 - 381
Target Start/End: Original strand, 5099860 - 5099921
Alignment:
Q  320 attaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||| ||||||||||||  | ||||||||| |||||||||||||||||||||||||||||    
T  5099860 attaccctctcttgtttagggggtatttaccctttcaagatatcaaccaatcaaaatgtaat 5099921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 27552738 - 27552665
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| |||||  ||| ||||||||| | |||||| ||||||| ||||||||||||||||||||||||    
T  27552738 ggttttttctagattactctcttttgtttagagggtatttatcccttcatgatatcaaccaatcaaaatgtaat 27552665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 309 - 381
Target Start/End: Original strand, 31547465 - 31547538
Alignment:
Q  309 gttttttctacattaccgtctcttgtttagatgatattt-accccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||| |||||| | ||||||||||| | ||||| ||||||||| ||||||||||||||||||||||||    
T  31547465 gttttttctagattaccctttcttgtttagagggtattttaccccttcatgatatcaaccaatcaaaatgtaat 31547538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 310 - 381
Target Start/End: Complemental strand, 34402222 - 34402152
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||| |||||| ||||||||||||| |||||||||||  | | ||||||||||||||||||||||||    
T  34402222 ttttttctaaattacc-tctcttgtttagaggatatttaccctcttatgatatcaaccaatcaaaatgtaat 34402152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 309 - 377
Target Start/End: Original strand, 29388962 - 29389031
Alignment:
Q  309 gttttttctacattaccgtctcttgtttagatgatattt-accccttcaagatatcaaccaatcaaaatg 377  Q
    ||||||||||||||||  |||||||||||||  |||||| |||| |||||||| ||||||||||||||||    
T  29388962 gttttttctacattactctctcttgtttagagaatattttaccctttcaagatttcaaccaatcaaaatg 29389031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 381
Target Start/End: Original strand, 34857951 - 34858016
Alignment:
Q  316 ctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||| ||| ||||||||    ||||||||| |||||||||||||||||||||||||||||    
T  34857951 ctacattaccctcttttgtttagggagtatttaccctttcaagatatcaaccaatcaaaatgtaat 34858016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 315 - 381
Target Start/End: Original strand, 9591612 - 9591679
Alignment:
Q  315 tctacattaccgtctcttgtttagatgata-tttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| ||||||||||||| | || |||||||  ||| ||||||||||||||||||||||||    
T  9591612 tctacattaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 9591679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 381
Target Start/End: Complemental strand, 15527483 - 15527416
Alignment:
Q  314 ttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||| |||||| ||||||||||||| | |||||||||  | | ||||||||||||||||||||||||    
T  15527483 ttctagattaccctctcttgtttagagggtatttaccctcttatgatatcaaccaatcaaaatgtaat 15527416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 381
Target Start/End: Complemental strand, 39590787 - 39590712
Alignment:
Q  307 tggttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||| |||||| |||||| |||||| | |||||  |||| ||| ||||||||||||||||||||||||    
T  39590787 tggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 39590712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 381
Target Start/End: Complemental strand, 27020281 - 27020215
Alignment:
Q  316 ctacattaccgtctcttgtttagatgata-tttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||| ||||||||||||| | || |||||||  ||| ||||||||||||||||||||||||    
T  27020281 ctacattaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 27020215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 381
Target Start/End: Complemental strand, 37256456 - 37256386
Alignment:
Q  311 tttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||| |||||  |||||||||||   | |||||| |||||||| |||||||||||||||||||||||    
T  37256456 tttttctatattactctctcttgtttaaggggtatttatcccttcaaaatatcaaccaatcaaaatgtaat 37256386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 301 - 381
Target Start/End: Original strand, 822811 - 822892
Alignment:
Q  301 atttattggttttttctacattaccgtctcttgtttagatgata-tttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||| ||||||||||||| |||||| |||||| |||||| | || |||||||  ||| || |||||||||||||||||||||    
T  822811 atttgttggttttttctagattaccctctcttatttagagggtattttaccctctcatgacatcaaccaatcaaaatgtaat 822892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 381
Target Start/End: Original strand, 8520282 - 8520318
Alignment:
Q  345 tttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||||| ||||||||||||||||||||||    
T  8520282 tttaccccttcaagttatcaaccaatcaaaatgtaat 8520318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 310 - 381
Target Start/End: Original strand, 37938494 - 37938566
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||| |||||| |||||| |||||| | |||||  |||| ||| ||||||||||||||||||||||||    
T  37938494 ttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 37938566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 320 - 379
Target Start/End: Complemental strand, 8526351 - 8526292
Alignment:
Q  320 attaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgta 379  Q
    |||||| |||||||||||   | ||||||||| |||||||||||| ||||||||||||||    
T  8526351 attaccctctcttgtttaagaggtatttaccctttcaagatatcagccaatcaaaatgta 8526292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 381
Target Start/End: Complemental strand, 9593905 - 9593830
Alignment:
Q  307 tggttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||| |||||| |||||| |||||| | |||||  |||| ||| ||||||||||||||||||| ||||    
T  9593905 tggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatataat 9593830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 381
Target Start/End: Complemental strand, 12501479 - 12501404
Alignment:
Q  307 tggttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||| |||||| |||||| |||||| | |||||  |||| ||| ||||||| ||||||||||||||||    
T  12501479 tggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcagccaatcaaaatgtaat 12501404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 381
Target Start/End: Complemental strand, 745801 - 745735
Alignment:
Q  316 ctacattaccgtctcttgtttagatgata-tttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||| ||||| ||||||||||||| | || |||||||  ||| ||||||||||||||||||||||||    
T  745801 ctacgttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 745735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 343 - 381
Target Start/End: Complemental strand, 3036446 - 3036408
Alignment:
Q  343 tatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||| || |||||||||||||||||||||||||||||    
T  3036446 tatttatcctttcaagatatcaaccaatcaaaatgtaat 3036408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 381
Target Start/End: Original strand, 27018122 - 27018196
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| |||||| |||||| |||||| | |||||  |||| | | ||||||||||||||||||||||||    
T  27018122 ggttttttctagattaccctctcttatttagaaggtattttaccctcttatgatatcaaccaatcaaaatgtaat 27018196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 377
Target Start/End: Complemental strand, 29391042 - 29390984
Alignment:
Q  320 attaccgtctcttgtttagatgatattt-accccttcaagatatcaaccaatcaaaatg 377  Q
    |||||| ||||||||||||| | ||||| |||| |||||||| ||||||||||||||||    
T  29391042 attaccctctcttgtttagagggtattttaccctttcaagatttcaaccaatcaaaatg 29390984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 381
Target Start/End: Original strand, 34401517 - 34401583
Alignment:
Q  315 tctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||| ||||| ||||||||||||| | || |||| |  ||| ||||||||||||||||||||||||    
T  34401517 tctacgttaccctctcttgtttagagggtaattactctctcatgatatcaaccaatcaaaatgtaat 34401583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 381
Target Start/End: Complemental strand, 19505105 - 19505044
Alignment:
Q  320 attaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||| ||||||||||||| | |||||||||  ||| ||||||||  ||||||||||||||    
T  19505105 attaccctctcttgtttagagggtatttaccctctcatgatatcaattaatcaaaatgtaat 19505044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 381
Target Start/End: Original strand, 30128626 - 30128699
Alignment:
Q  309 gttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||| |||||| |||||| |||||| | |||||  | || ||| ||||||||||||||||||||||||    
T  30128626 gttttttctagattaccctctcttatttagagggtattttacgctctcatgatatcaaccaatcaaaatgtaat 30128699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 381
Target Start/End: Original strand, 37270247 - 37270312
Alignment:
Q  316 ctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||| ||||| ||||||||||||| | || ||||||  | | ||||||||||||||||||||||||    
T  37270247 ctacgttaccctctcttgtttagagggtaattaccctattatgatatcaaccaatcaaaatgtaat 37270312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 4e-20; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 315 - 381
Target Start/End: Complemental strand, 15825981 - 15825915
Alignment:
Q  315 tctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||| |||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  15825981 tctagattaacgtctcttgtttagaggatatttaccctttcaagatatcaaccaatcaaaatgtaat 15825915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 312 - 381
Target Start/End: Original strand, 15825071 - 15825140
Alignment:
Q  312 ttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||||| |||||| |||| | ||||||||||| |||||||||||||||||||||||||||||    
T  15825071 ttttctacattaccctctcttatttataggatatttaccctttcaagatatcaaccaatcaaaatgtaat 15825140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 307 - 379
Target Start/End: Original strand, 35019234 - 35019306
Alignment:
Q  307 tggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgta 379  Q
    ||||||||||||||||||| | |||| |||||| | |||||| ||||||||||||||||||||||||||||||    
T  35019234 tggttttttctacattaccctatcttatttagagggtatttatcccttcaagatatcaaccaatcaaaatgta 35019306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 305 - 381
Target Start/End: Original strand, 45407240 - 45407316
Alignment:
Q  305 attggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||| ||||||||| |||| | ||||||||||||| | |||||||||||||| ||||||||||||||||||||||||    
T  45407240 attgtttttttctagattatcctctcttgtttagagggtatttaccccttcatgatatcaaccaatcaaaatgtaat 45407316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 39070376 - 39070303
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||||||| | | |||||||||||   ||||||||| |||||||||||||||||||||||||||||    
T  39070376 ggttttttctacattatcctatcttgtttagagtgtatttaccctttcaagatatcaaccaatcaaaatgtaat 39070303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 39860016 - 39859943
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| |||||| ||||||||||||| | |||||||||  ||| ||||||||||||||||||||||||    
T  39860016 ggttttttctagattaccctctcttgtttagagggtatttaccctctcatgatatcaaccaatcaaaatgtaat 39859943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 310 - 381
Target Start/End: Original strand, 38576588 - 38576659
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||| |||||| ||||||||||||| | |||||||||  ||| ||||||||||||||||||||||||    
T  38576588 ttttttctagattaccctctcttgtttagagggtatttaccctctcatgatatcaaccaatcaaaatgtaat 38576659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 31643097 - 31643025
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||||| |||| ||||||| ||||  | ||||||||| |||||||||||||||||||||||||||||    
T  31643097 ggttttttctacactaccctctcttgcttagggg-tatttaccctttcaagatatcaaccaatcaaaatgtaat 31643025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 42647373 - 42647300
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||| || |||||| ||| ||||||||| | |||||||||||||| ||||||||||||||||||| ||||    
T  42647373 ggttttttttagattaccctctattgtttagagggtatttaccccttcatgatatcaaccaatcaaaatataat 42647300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 310 - 381
Target Start/End: Complemental strand, 6096898 - 6096827
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||| |||||| |||||| |||||| |||||||||||  |||  |||||||||||||||||||||||    
T  6096898 ttttttctagattaccctctcttatttagaggatatttaccctctcataatatcaaccaatcaaaatgtaat 6096827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 381
Target Start/End: Original strand, 38362421 - 38362487
Alignment:
Q  315 tctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||| |||||| |||||||||||||  |||||||||| ||||||||||||| |||||||||| ||||    
T  38362421 tctagattaccctctcttgtttagagaatatttaccctttcaagatatcaatcaatcaaaatataat 38362487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 307 - 381
Target Start/End: Complemental strand, 40618565 - 40618491
Alignment:
Q  307 tggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||| |||||| | ||||||||||  | |||||||||| ||| |||||||||||||||| |||||||    
T  40618565 tggttttttctagattaccctatcttgtttagggggtatttaccccctcatgatatcaaccaatcaacatgtaat 40618491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 308 - 376
Target Start/End: Original strand, 23625647 - 23625718
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaaga---tatcaaccaatcaaaat 376  Q
    |||||||||||||||||| ||||||||||||| | ||||||||| || ||||   |||||||||||||||||    
T  23625647 ggttttttctacattaccctctcttgtttagaaggtatttacccttttaagatactatcaaccaatcaaaat 23625718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 308 - 381
Target Start/End: Original strand, 29725488 - 29725561
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||||||||| |||||||| | |  | |||||| || || ||||||||||||||||||||||||||    
T  29725488 ggttttttctacattaccctctcttgtattgggggtatttatccttttaagatatcaaccaatcaaaatgtaat 29725561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 308 - 381
Target Start/End: Original strand, 40302414 - 40302487
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| ||||   ||||||||||||| | |||||||||  ||| ||||||||||||||||||||||||    
T  40302414 ggttttttctatattattctctcttgtttagagggtatttaccctctcatgatatcaaccaatcaaaatgtaat 40302487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 16097682 - 16097608
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| |||||| |||||| |||||| | |||||  |||| ||| ||||||||||||||||||||||||    
T  16097682 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 16097608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 381
Target Start/End: Original strand, 26965364 - 26965438
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| |||||| |||||| |||||| | |||||  |||| ||| ||||||||||||||||||||||||    
T  26965364 ggttttttctaaattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 26965438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 320 - 381
Target Start/End: Complemental strand, 41671542 - 41671481
Alignment:
Q  320 attaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||| | ||||||||| | | ||||||||| ||||||||||||||||||||| |||||||    
T  41671542 attaccctatcttgtttatagggtatttaccctttcaagatatcaaccaatcaacatgtaat 41671481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 381
Target Start/End: Complemental strand, 18957476 - 18957400
Alignment:
Q  306 ttggttttttctacattaccgtctcttgtttagatgata-tttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||||| |||||| |||||| |||||| | || |||||||  ||| |||||||| |||||||||||||||    
T  18957476 ttggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaatcaatcaaaatgtaat 18957400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 381
Target Start/End: Original strand, 276585 - 276651
Alignment:
Q  316 ctacattaccgtctcttgtttagatgata-tttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||| ||||||||||| | | || |||||||  ||| ||||||||||||||||||||||||    
T  276585 ctacattaccctctcttgtttatagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 276651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 278801 - 278727
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| |||||| |||| | |||||| | |||||  |||| ||| ||||||||||||||||||||||||    
T  278801 ggttttttctagattaccctctcatatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 278727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 381
Target Start/End: Original strand, 637051 - 637125
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| |||||| |||| | |||||| | |||||  |||| ||| ||||||||||||||||||||||||    
T  637051 ggttttttctagattaccctctcatatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 637125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 381
Target Start/End: Complemental strand, 639264 - 639198
Alignment:
Q  316 ctacattaccgtctcttgtttagatgata-tttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||| ||||||||||| | | || |||||||  ||| ||||||||||||||||||||||||    
T  639264 ctacattaccctctcttgtttatagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 639198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 381
Target Start/End: Original strand, 822854 - 822928
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| |||||| |||| | |||||| | |||||  |||| ||| ||||||||||||||||||||||||    
T  822854 ggttttttctagattaccctctcatatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 822928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 381
Target Start/End: Complemental strand, 825070 - 825004
Alignment:
Q  316 ctacattaccgtctcttgtttagatgata-tttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||| ||||||||||| | | || |||||||  ||| ||||||||||||||||||||||||    
T  825070 ctacattaccctctcttgtttatagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 825004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 381
Target Start/End: Original strand, 3703168 - 3703242
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| |||||| |||||| |||||| | |||||  |||| ||| |||||||| |||||||||||||||    
T  3703168 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaatcaatcaaaatgtaat 3703242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 381
Target Start/End: Complemental strand, 4622955 - 4622889
Alignment:
Q  316 ctacattaccgtctcttgtttagatgata-tttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||| ||||||||||||| | || |||||||  | | ||||||||||||||||||||||||    
T  4622955 ctacattaccctctcttgtttagagggtaatttaccctcttatgatatcaaccaatcaaaatgtaat 4622889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 381
Target Start/End: Original strand, 17946583 - 17946657
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| |||||| |||||| |||||| | |||||  |||| ||| ||||||||||||| ||||||||||    
T  17946583 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaattaaaatgtaat 17946657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 381
Target Start/End: Original strand, 23345171 - 23345245
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| |||||| |||||| |||||| | |||||   ||| ||| ||||||||||||||||||||||||    
T  23345171 ggttttttctagattaccctctcttatttagagggtattttatcctctcatgatatcaaccaatcaaaatgtaat 23345245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 343 - 381
Target Start/End: Complemental strand, 26951328 - 26951290
Alignment:
Q  343 tatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||| || ||||||||||||||||||||||||||    
T  26951328 tatttacccttttaagatatcaaccaatcaaaatgtaat 26951290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 381
Target Start/End: Original strand, 27911889 - 27911955
Alignment:
Q  316 ctacattaccgtctcttgtttagatgata-tttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||| ||||| ||||||||||||| | || |||||||  ||| ||||||||||||||||||||||||    
T  27911889 ctacgttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 27911955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 381
Target Start/End: Original strand, 27958308 - 27958374
Alignment:
Q  316 ctacattaccgtctcttgtttagatgata-tttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||| ||||| ||||||||||||| | || |||||||  ||| ||||||||||||||||||||||||    
T  27958308 ctacgttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 27958374  T

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Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 381
Target Start/End: Complemental strand, 5588143 - 5588106
Alignment:
Q  344 atttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||| ||| ||||||||||||||||||||||||    
T  5588143 atttaccccctcatgatatcaaccaatcaaaatgtaat 5588106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 328 - 381
Target Start/End: Complemental strand, 23627569 - 23627516
Alignment:
Q  328 ctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||| |||||| |||||||| || || ||||||||||| ||||||||||||||    
T  23627569 ctcttatttagaggatatttatccttttaagatatcaacaaatcaaaatgtaat 23627516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 381
Target Start/End: Complemental strand, 25583812 - 25583751
Alignment:
Q  321 ttaccgtctcttgtttagatgata-tttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||| ||||||||||||| | || |||||||  ||| ||||||||||||||||||||||||    
T  25583812 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 25583751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 30112249 - 30112176
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| || ||| ||||||||||||    |||||||||  ||| |||||||| |||||||||||||||    
T  30112249 ggttttttctagatgaccctctcttgtttagggagtatttaccctctcatgatatcaatcaatcaaaatgtaat 30112176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 381
Target Start/End: Original strand, 38059240 - 38059317
Alignment:
Q  305 attggttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| || |||||| |||||| |||||| | |||||  |||| ||| ||||||||||||||||||| ||||    
T  38059240 attggttttttttagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatataat 38059317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 381
Target Start/End: Original strand, 41544844 - 41544909
Alignment:
Q  316 ctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||| ||||| | ||||||||||||| || ||| ||  ||| ||||||||||||||||||||||||    
T  41544844 ctacgttaccctatcttgtttagatggtaattatcctctcatgatatcaaccaatcaaaatgtaat 41544909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 381
Target Start/End: Original strand, 4621484 - 4621556
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||| |||||| | |||| |||||| | |||||  |||| ||| ||||||||||||||||||||||||    
T  4621484 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 4621556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 381
Target Start/End: Original strand, 3860 - 3933
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| |||||| ||||||||||||| | |||||||||||||| |||||||| |||||||||||||||    
T  3860 ggttttttctagattaccctctcttgtttagagggtatttaccccttcatgatatcaatcaatcaaaatgtaat 3933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 310 - 381
Target Start/End: Complemental strand, 71900 - 71829
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||||| | ||||||||||||  ||||||||||| ||||||||||||| |||||||||||||||    
T  71900 ttttttctacattatcctctcttgtttaggggatatttaccctttcaagatatcaatcaatcaaaatgtaat 71829  T

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Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 310 - 381
Target Start/End: Complemental strand, 5090434 - 5090363
Alignment:
Q  310 ttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||||||| ||||||||| |   | |||||||||||||||||||||||||||||||||||||||    
T  5090434 ttttttctacattaccctctcttgttcaaggggtatttaccccttcaagatatcaaccaatcaaaatgtaat 5090363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 381
Target Start/End: Original strand, 24158982 - 24159060
Alignment:
Q  303 ttattggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||| |||||||||||||||||| ||| ||||||||  | ||||||||||||| |||||||||||||||||||| ||||    
T  24158982 ttataggttttttctacattaccctcttttgtttagggggtatttaccccttctagatatcaaccaatcaaaatataat 24159060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 309 - 379
Target Start/End: Complemental strand, 34574942 - 34574872
Alignment:
Q  309 gttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgta 379  Q
    |||||||||||| |||| |||||||||| || | |||||||||||||||||||||||||||| ||||||||    
T  34574942 gttttttctacactaccctctcttgtttggaaggtatttaccccttcaagatatcaaccaattaaaatgta 34574872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 305 - 381
Target Start/End: Original strand, 13866011 - 13866085
Alignment:
Q  305 attggttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||||| |||||| | ||||||||||  | ||||||||| |||||||||||||||||||||||||||||    
T  13866011 attggttttttctatattaccctatcttgtttag--ggtatttacccgttcaagatatcaaccaatcaaaatgtaat 13866085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 302 - 381
Target Start/End: Complemental strand, 16922324 - 16922244
Alignment:
Q  302 tttattggttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    |||| |||||||||||| |||||| |||||| |||||| | |||||  |||| ||| ||||||||||||||||||||||||    
T  16922324 tttaatggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 16922244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 381
Target Start/End: Original strand, 17557571 - 17557646
Alignment:
Q  307 tggttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||| |||||| |||||| |||||| | |||||  |||| ||| ||||||||||||||||||||||||    
T  17557571 tggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 17557646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 381
Target Start/End: Original strand, 4587861 - 4587935
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgata-tttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| |||||| |||||| |||||| |||| |||||||  ||| ||||||||||||| ||||||||||    
T  4587861 ggttttttctagattaccctctcttatttagaggatattttaccctctcatgatatcaaccaattaaaatgtaat 4587935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 381
Target Start/End: Original strand, 5686338 - 5686410
Alignment:
Q  309 gttttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||| |||||| ||| ||||||||| | ||||| | |  ||| ||||||||||||||||||||||||    
T  5686338 gttttttctagattaccctcttttgtttagagggtattttctctctcatgatatcaaccaatcaaaatgtaat 5686410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 381
Target Start/End: Complemental strand, 11837851 - 11837785
Alignment:
Q  316 ctacattaccgtctcttgtttagatgata-tttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||| ||||| ||||||||||||| | || |||||||  ||| ||||||||||||||||||||||||    
T  11837851 ctacgttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 11837785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 381
Target Start/End: Original strand, 12782975 - 12783049
Alignment:
Q  308 ggttttttctacattaccgtctcttgttta-gatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||||||||| |||||| |||| |  | |||||| |||||||| ||||||| ||| |||||||||||    
T  12782975 ggttttttctacattaccctctcttatttaggggggtatttatcccttcaatatatcaatcaaccaaaatgtaat 12783049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 381
Target Start/End: Original strand, 14103792 - 14103858
Alignment:
Q  316 ctacattaccgtctcttgtttagatgata-tttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||| ||||| ||||||||||||| | || |||||||  ||| ||||||||||||||||||||||||    
T  14103792 ctacgttaccctctcttgtttagagggtaatttaccctctcacgatatcaaccaatcaaaatgtaat 14103858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 14106008 - 14105934
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| |||||| |||||| |||||| | |||||  |||| | | ||||||||||||||||||||||||    
T  14106008 ggttttttctagattaccctctcttatttagagggtattttaccctcttatgatatcaaccaatcaaaatgtaat 14105934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 381
Target Start/End: Original strand, 23580086 - 23580152
Alignment:
Q  316 ctacattaccgtctcttgtttagatgata-tttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||| ||||| ||||||||||||| | || |||||||  ||| ||||||||||||||||||||||||    
T  23580086 ctaccttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 23580152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 381
Target Start/End: Complemental strand, 28581025 - 28580955
Alignment:
Q  311 tttttctacattaccgtctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||| || |||||| ||||||||||||| | |||||| ||  ||| ||||| ||||||||||||||||||    
T  28581025 tttttttagattaccctctcttgtttagagggtatttatcctctcatgatataaaccaatcaaaatgtaat 28580955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 381
Target Start/End: Complemental strand, 23582286 - 23582209
Alignment:
Q  305 attggttttttctacattaccgtctcttgtttagatgata-tttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||||| |||||| |||||| |||||| | || |||||||  ||| || |||||||||| ||||||||||    
T  23582286 attggttttttctagattaccctctcttatttagagggtattttaccctctcatgacatcaaccaattaaaatgtaat 23582209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 381
Target Start/End: Original strand, 27782272 - 27782333
Alignment:
Q  321 ttaccgtctcttgtttagatgata-tttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||| ||||||||||||| | || |||||||  ||| ||||||||||||||||||||||||    
T  27782272 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaat 27782333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 381
Target Start/End: Original strand, 25109367 - 25109419
Alignment:
Q  329 tcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| | || ||||||  ||| ||||||||||||||||||||||||    
T  25109367 tcttgtttagagggtaattaccctctcatgatatcaaccaatcaaaatgtaat 25109419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 381
Target Start/End: Complemental strand, 27784497 - 27784421
Alignment:
Q  306 ttggttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||| || |||||| |||||| |||||| | |||||  |||| ||| ||||||||||||| ||||||||||    
T  27784497 ttggttttttttagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaataaaaatgtaat 27784421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0779 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0779
Description:

Target: scaffold0779; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 381
Target Start/End: Complemental strand, 218 - 143
Alignment:
Q  307 tggttttttctacattaccgtctcttgtttagatgatatttacccct-tcaagatatcaaccaatcaaaatgtaat 381  Q
    |||||||||||| |||||| |||||| |||||| | |||||  |||| ||| ||||||||||||||||||||||||    
T  218 tggttttttctatattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaat 143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 381
Target Start/End: Complemental strand, 94737 - 94683
Alignment:
Q  327 tctcttgtttagatgatatttaccccttcaagatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||||| | ||||||||  ||||||||||||| |||||||||||||||    
T  94737 tctcttgtttagagggtatttaccatttcaagatatcaatcaatcaaaatgtaat 94683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 56561 - 56487
Alignment:
Q  308 ggttttttctacattaccgtctcttgtttagatgatatttaccccttcaa-gatatcaaccaatcaaaatgtaat 381  Q
    ||||||||||| |||||| |||||| |||||| | |||||  |||| | | ||||||||||||||||||||||||    
T  56561 ggttttttctagattaccctctcttatttagagggtattttaccctcccatgatatcaaccaatcaaaatgtaat 56487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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