View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: F9328-LTR4-TNT-insertion-2 (Length: 89)

Name: F9328-LTR4-TNT-insertion-2
Description: F9328-LTR4
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] F9328-LTR4-TNT-insertion-2
F9328-LTR4-TNT-insertion-2
[»] chr8 (18 HSPs)
chr8 (9-79)||(22123830-22123900)
chr8 (9-79)||(18854552-18854623)
chr8 (9-79)||(18864920-18864991)
chr8 (9-79)||(29122677-29122748)
chr8 (9-79)||(16883616-16883687)
chr8 (9-79)||(22124976-22125047)
chr8 (38-79)||(17670045-17670086)
chr8 (38-79)||(17676697-17676738)
chr8 (38-79)||(21916043-21916084)
chr8 (9-79)||(22116166-22116237)
chr8 (38-79)||(5534913-5534954)
chr8 (38-79)||(8355240-8355281)
chr8 (38-79)||(22083421-22083462)
chr8 (9-79)||(19498028-19498099)
chr8 (9-79)||(22047536-22047607)
chr8 (38-79)||(28454340-28454381)
chr8 (39-79)||(18064902-18064942)
chr8 (9-79)||(19495980-19496051)
[»] chr7 (24 HSPs)
chr7 (9-79)||(1347084-1347155)
chr7 (9-79)||(11365787-11365858)
chr7 (9-79)||(13684052-13684123)
chr7 (9-79)||(13690683-13690754)
chr7 (9-79)||(15156614-15156685)
chr7 (9-79)||(15163265-15163336)
chr7 (9-79)||(20703434-20703505)
chr7 (9-79)||(32767266-32767337)
chr7 (9-79)||(18175696-18175767)
chr7 (38-79)||(9511485-9511526)
chr7 (38-79)||(18165148-18165189)
chr7 (38-79)||(40523836-40523877)
chr7 (40-79)||(11232773-11232812)
chr7 (40-79)||(11239460-11239499)
chr7 (9-79)||(18182368-18182439)
chr7 (9-79)||(20871479-20871550)
chr7 (38-76)||(12703882-12703920)
chr7 (38-79)||(16407769-16407810)
chr7 (38-79)||(49050962-49051003)
chr7 (45-79)||(21253-21287)
chr7 (45-79)||(8202575-8202609)
chr7 (45-79)||(15021700-15021734)
chr7 (39-79)||(8705567-8705607)
chr7 (39-79)||(8712238-8712278)
[»] chr6 (29 HSPs)
chr6 (9-79)||(26130058-26130129)
chr6 (9-79)||(30693953-30694024)
chr6 (9-78)||(14054003-14054073)
chr6 (38-79)||(6980251-6980292)
chr6 (38-79)||(18194630-18194671)
chr6 (38-79)||(20060240-20060281)
chr6 (38-79)||(27328531-27328572)
chr6 (38-79)||(27389271-27389312)
chr6 (38-79)||(30596816-30596857)
chr6 (38-79)||(30638626-30638667)
chr6 (9-79)||(8796782-8796853)
chr6 (9-79)||(14098177-14098247)
chr6 (38-79)||(4233946-4233987)
chr6 (9-79)||(20801348-20801419)
chr6 (9-75)||(25471635-25471702)
chr6 (9-75)||(27185287-27185354)
chr6 (9-75)||(27207123-27207190)
chr6 (9-75)||(27242038-27242105)
chr6 (9-75)||(27263886-27263953)
chr6 (45-79)||(8228458-8228492)
chr6 (45-79)||(18930648-18930682)
chr6 (38-79)||(1545531-1545572)
chr6 (38-79)||(12762295-12762335)
chr6 (39-79)||(32565736-32565776)
chr6 (9-79)||(1539402-1539473)
chr6 (40-79)||(16552515-16552554)
chr6 (40-79)||(16576399-16576438)
chr6 (40-79)||(16618942-16618981)
chr6 (40-79)||(16629071-16629110)
[»] chr5 (40 HSPs)
chr5 (9-79)||(19991474-19991545)
chr5 (9-79)||(22328607-22328678)
chr5 (9-79)||(22342038-22342109)
chr5 (9-79)||(1692880-1692951)
chr5 (9-79)||(18039112-18039183)
chr5 (9-79)||(27681130-27681201)
chr5 (9-79)||(27687772-27687843)
chr5 (9-79)||(37287225-37287296)
chr5 (9-79)||(37293928-37293999)
chr5 (9-79)||(14995481-14995552)
chr5 (9-79)||(15002124-15002195)
chr5 (9-79)||(22587686-22587757)
chr5 (9-79)||(17283658-17283729)
chr5 (9-79)||(22132588-22132659)
chr5 (9-79)||(22139280-22139351)
chr5 (9-79)||(29471803-29471874)
chr5 (9-79)||(29478398-29478469)
chr5 (8-79)||(25406015-25406087)
chr5 (38-79)||(17707403-17707444)
chr5 (38-79)||(22264541-22264582)
chr5 (38-79)||(23609519-23609560)
chr5 (38-79)||(23840915-23840956)
chr5 (38-79)||(24472721-24472762)
chr5 (38-79)||(27608330-27608371)
chr5 (38-79)||(27614936-27614977)
chr5 (38-79)||(27664264-27664305)
chr5 (38-79)||(27670903-27670944)
chr5 (38-79)||(34295027-34295068)
chr5 (38-79)||(41098697-41098738)
chr5 (38-79)||(41294908-41294949)
chr5 (40-79)||(23583729-23583768)
chr5 (9-79)||(37543630-37543701)
chr5 (45-79)||(25106355-25106389)
chr5 (45-79)||(25165448-25165482)
chr5 (45-79)||(27516344-27516378)
chr5 (45-79)||(27522981-27523015)
chr5 (38-79)||(20775457-20775498)
chr5 (38-79)||(22063300-22063340)
chr5 (39-79)||(21668300-21668340)
chr5 (39-79)||(29316033-29316073)
[»] chr4 (30 HSPs)
chr4 (9-79)||(14299273-14299344)
chr4 (9-79)||(14305870-14305941)
chr4 (9-79)||(386775-386846)
chr4 (9-79)||(26285353-26285424)
chr4 (9-79)||(40477682-40477753)
chr4 (9-79)||(6873822-6873893)
chr4 (36-79)||(22194209-22194252)
chr4 (9-79)||(40453453-40453524)
chr4 (9-79)||(51494253-51494324)
chr4 (38-79)||(3107974-3108015)
chr4 (38-79)||(15148047-15148088)
chr4 (38-79)||(17962822-17962863)
chr4 (38-79)||(19780764-19780805)
chr4 (38-79)||(23953737-23953778)
chr4 (38-79)||(23960399-23960440)
chr4 (38-79)||(36885209-36885250)
chr4 (38-79)||(7901660-7901701)
chr4 (38-79)||(12474610-12474651)
chr4 (38-79)||(12481240-12481281)
chr4 (38-79)||(15361722-15361763)
chr4 (38-79)||(16232317-16232358)
chr4 (38-79)||(18024902-18024943)
chr4 (9-79)||(9272615-9272686)
chr4 (9-79)||(15322552-15322623)
chr4 (45-79)||(8384405-8384439)
chr4 (45-79)||(8391060-8391094)
chr4 (45-79)||(15256179-15256213)
chr4 (45-79)||(17090479-17090513)
chr4 (45-79)||(17807984-17808018)
chr4 (39-79)||(12350068-12350108)
[»] chr2 (22 HSPs)
chr2 (9-79)||(1842672-1842743)
chr2 (9-79)||(27598854-27598925)
chr2 (11-79)||(12828662-12828731)
chr2 (9-79)||(23170628-23170699)
chr2 (9-79)||(23581885-23581956)
chr2 (38-79)||(19490363-19490404)
chr2 (38-79)||(22321461-22321502)
chr2 (38-79)||(22327614-22327655)
chr2 (38-79)||(26878041-26878082)
chr2 (38-79)||(27616888-27616929)
chr2 (38-79)||(28432408-28432449)
chr2 (38-79)||(29233134-29233175)
chr2 (38-79)||(29346433-29346474)
chr2 (9-79)||(24914410-24914482)
chr2 (42-79)||(24261571-24261608)
chr2 (42-79)||(24266654-24266691)
chr2 (9-79)||(10865764-10865835)
chr2 (9-79)||(10873129-10873200)
chr2 (44-79)||(27212207-27212242)
chr2 (45-79)||(16922103-16922137)
chr2 (9-79)||(13307056-13307126)
chr2 (40-79)||(27368874-27368913)
[»] chr3 (30 HSPs)
chr3 (9-79)||(16490108-16490179)
chr3 (9-79)||(15711846-15711917)
chr3 (9-79)||(15727488-15727559)
chr3 (9-79)||(23705210-23705281)
chr3 (9-79)||(23723666-23723737)
chr3 (9-79)||(23742122-23742193)
chr3 (9-79)||(41202240-41202311)
chr3 (38-79)||(5107358-5107399)
chr3 (38-79)||(5221010-5221051)
chr3 (38-79)||(26196033-26196074)
chr3 (38-79)||(26889046-26889087)
chr3 (38-79)||(37614983-37615024)
chr3 (9-79)||(20057847-20057918)
chr3 (9-79)||(20064485-20064556)
chr3 (38-79)||(417592-417633)
chr3 (38-79)||(6596849-6596890)
chr3 (38-79)||(10154257-10154298)
chr3 (38-79)||(14673673-14673714)
chr3 (38-79)||(22643777-22643818)
chr3 (36-79)||(16624525-16624568)
chr3 (40-79)||(31423029-31423068)
chr3 (40-79)||(41092834-41092873)
chr3 (45-79)||(1333560-1333594)
chr3 (9-79)||(5150425-5150495)
chr3 (38-79)||(3690210-3690251)
chr3 (38-79)||(6598310-6598351)
chr3 (38-79)||(6604990-6605031)
chr3 (9-75)||(6608054-6608122)
chr3 (39-79)||(5200799-5200839)
chr3 (39-79)||(12482001-12482041)
[»] chr1 (16 HSPs)
chr1 (9-79)||(18600550-18600621)
chr1 (8-79)||(21828304-21828376)
chr1 (8-79)||(21843878-21843950)
chr1 (38-79)||(20216401-20216442)
chr1 (38-79)||(44845358-44845399)
chr1 (9-79)||(41349295-41349366)
chr1 (45-79)||(46157821-46157855)
chr1 (38-79)||(16346249-16346290)
chr1 (38-79)||(16352898-16352939)
chr1 (39-79)||(27899153-27899193)
chr1 (43-79)||(41479034-41479070)
chr1 (39-79)||(43063770-43063810)
chr1 (39-79)||(44755677-44755717)
chr1 (39-79)||(49334144-49334184)
chr1 (40-79)||(33384642-33384681)
chr1 (9-79)||(41356732-41356803)
[»] scaffold0044 (2 HSPs)
scaffold0044 (9-79)||(7651-7722)
scaffold0044 (38-79)||(30116-30157)
[»] scaffold0005 (1 HSPs)
scaffold0005 (9-79)||(306688-306759)
[»] scaffold0557 (1 HSPs)
scaffold0557 (38-79)||(8-49)
[»] scaffold0379 (1 HSPs)
scaffold0379 (38-79)||(11939-11980)
[»] scaffold0140 (1 HSPs)
scaffold0140 (38-79)||(38272-38313)
[»] scaffold0061 (1 HSPs)
scaffold0061 (38-79)||(59935-59976)
[»] scaffold0028 (3 HSPs)
scaffold0028 (38-79)||(67099-67140)
scaffold0028 (9-79)||(41171-41242)
scaffold0028 (9-79)||(56678-56749)
[»] scaffold0017 (1 HSPs)
scaffold0017 (38-79)||(138657-138698)
[»] scaffold0155 (1 HSPs)
scaffold0155 (9-79)||(10260-10331)
[»] scaffold0029 (2 HSPs)
scaffold0029 (9-79)||(106330-106401)
scaffold0029 (9-79)||(126564-126635)
[»] scaffold0109 (1 HSPs)
scaffold0109 (10-79)||(26216-26286)
[»] scaffold0052 (3 HSPs)
scaffold0052 (38-79)||(1528-1569)
scaffold0052 (45-79)||(9930-9964)
scaffold0052 (45-79)||(56352-56386)
[»] scaffold0229 (1 HSPs)
scaffold0229 (9-79)||(12197-12268)
[»] scaffold0141 (1 HSPs)
scaffold0141 (9-79)||(37632-37703)
[»] scaffold0049 (1 HSPs)
scaffold0049 (9-79)||(77109-77180)
[»] scaffold0055 (1 HSPs)
scaffold0055 (45-79)||(24941-24975)
[»] scaffold0126 (1 HSPs)
scaffold0126 (39-79)||(4572-4612)


Alignment Details
Target: chr8 (Bit Score: 63; Significance: 5e-28; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 5e-28
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 22123830 - 22123900
Alignment:
Q  9 gtttagcaattatgcaatgctatttaaggatgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22123830 gtttagcaattatgcaatgttatttaaggatggttatgatgttaatttatgattcgcaattgcattgatta 22123900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 18854623 - 18854552
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| | || ||| | ||||||||||||||||||||||||||||||| |||||||||    
T  18854623 gtttagcaattatgcaatgttgttaaagaaatgattatgatgttaatttatgattcgcaattacattgatta 18854552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 18864991 - 18864920
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| | || ||| | ||||||||||||||||||||||||||||||| |||||||||    
T  18864991 gtttagcaattatgcaatgttgttaaagaaatgattatgatgttaatttatgattcgcaattacattgatta 18864920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 29122748 - 29122677
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| | || ||| | ||||||||||||||||||||||||||||||| |||||||||    
T  29122748 gtttagcaattatgcaatgttgttaaagaaatgattatgatgttaatttatgattcgcaattacattgatta 29122677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 16883616 - 16883687
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| | || ||| | ||| ||||||||||||||||||||||||||| |||||||||    
T  16883616 gtttagcaattatgcaatgttgttaaagaaatgaatatgatgttaatttatgattcgcaattacattgatta 16883687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 22124976 - 22125047
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||| |||||| |||| ||| | ||||||||||||||| ||||||||||||||| |||||||||    
T  22124976 gtttagcaattacgcaatgttattaaagaaatgattatgatgttaaattatgattcgcaattacattgatta 22125047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 17670045 - 17670086
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  17670045 atgattatgatgttaatttatgattcgcaattacattgatta 17670086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 17676697 - 17676738
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  17676697 atgattatgatgttaatttatgattcgcaattacattgatta 17676738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 21916043 - 21916084
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  21916043 atgattatgatgttaatttatgattcgcaattacattgatta 21916084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 22116166 - 22116237
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||| |||||| | || ||| | ||||||||||||||| ||||||||||||||| |||||||||    
T  22116166 gtttagcaattacgcaatgttgttaaagaaatgattatgatgttaaattatgattcgcaattacattgatta 22116237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 5534913 - 5534954
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||| ||||| |||||||||    
T  5534913 atgattatgatgttaatttatgattcacaattacattgatta 5534954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 8355240 - 8355281
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||| |||||||||||||||||||||||| |||||||||    
T  8355240 atgattaagatgttaatttatgattcgcaattacattgatta 8355281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 22083462 - 22083421
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||| ||||||||||||||||||||||| |||||||||    
T  22083462 atgattataatgttaatttatgattcgcaattacattgatta 22083421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 19498099 - 19498028
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||| | || | | ||| |||||||| |||||||||||||||| ||||| |||||||||    
T  19498099 gtttagcaattatgcaaagttaataatggaatgattatgttgttaatttatgattctcaattacattgatta 19498028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 22047607 - 22047536
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||| | || | | ||| |||||||| |||||||||||||||| ||||| |||||||||    
T  22047607 gtttagcaattatgcaaagttaataatggaatgattatgttgttaatttatgattctcaattacattgatta 22047536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 28454381 - 28454340
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||| ||||||||||||||||||||| ||||| |||||||||    
T  28454381 atgaatatgatgttaatttatgattctcaattacattgatta 28454340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 18064942 - 18064902
Alignment:
Q  39 tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||| ||||||||||||||||||  ||||||||||||||    
T  18064942 tgattaggatgttaatttatgattcttaattgcattgatta 18064902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 19496051 - 19495980
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||| | || | | ||| |||||||| | |||||||||||||| ||||| |||||||||    
T  19496051 gtttagcaattatgcaaagttaataatggaatgattatgttattaatttatgattctcaattacattgatta 19495980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 8e-24; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 8e-24
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 1347155 - 1347084
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  1347155 gtttagcaattatgcaatgttatttaaggaatgattatgatgttaatttatgattcgcaattacattgatta 1347084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 2e-21
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 11365858 - 11365787
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||| |||||||||    
T  11365858 gtttagcaattatgcaatgttatttaaggaatgattatgatgttaatttataattcgcaattacattgatta 11365787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 2e-21
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 13684123 - 13684052
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||| |||||||||    
T  13684123 gtttagcaattatgcaatgttatttaaggaatgattatgatgttaatttataattcgcaattacattgatta 13684052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 2e-21
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 13690754 - 13690683
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||| |||||||||    
T  13690754 gtttagcaattatgcaatgttatttaaggaatgattatgatgttaatttataattcgcaattacattgatta 13690683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 5e-19
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 15156614 - 15156685
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||| ||||||||| ||| |||||| ||||||||||||||||||||||||||||||| |||||||||    
T  15156614 gtttagcaaatatgcaatgttatctaaggaatgattatgatgttaatttatgattcgcaattacattgatta 15156685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 5e-19
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 15163265 - 15163336
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||| ||||||||| ||| |||||| ||||||||||||||||||||||||||||||| |||||||||    
T  15163265 gtttagcaaatatgcaatgttatctaaggaatgattatgatgttaatttatgattcgcaattacattgatta 15163336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 20703434 - 20703505
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| | || ||| | ||||||||||||||||||||||||||||||| |||||||||    
T  20703434 gtttagcaattatgcaatgttgttaaagaaatgattatgatgttaatttatgattcgcaattacattgatta 20703505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 32767337 - 32767266
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| | || ||| | ||||||||||||||||||||||||||||||| |||||||||    
T  32767337 gtttagcaattatgcaatgttgttaaagaaatgattatgatgttaatttatgattcgcaattacattgatta 32767266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 18175767 - 18175696
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||| ||||||||| | || ||| | ||||||||||||||||||||||||||||||| |||||||||    
T  18175767 gtttagcaaatatgcaatgttgttaaagaaatgattatgatgttaatttatgattcgcaattacattgatta 18175696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 9511485 - 9511526
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  9511485 atgattatgatgttaatttatgattcgcaattacattgatta 9511526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 18165148 - 18165189
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  18165148 atgattatgatgttaatttatgattcgcaattacattgatta 18165189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 40523836 - 40523877
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  40523836 atgattatgatgttaatttatgattcgcaattacattgatta 40523877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 11232773 - 11232812
Alignment:
Q  40 gattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  11232773 gattatgatgttaatttatgattcgcaattacattgatta 11232812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 11239460 - 11239499
Alignment:
Q  40 gattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  11239460 gattatgatgttaatttatgattcgcaattacattgatta 11239499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 18182439 - 18182368
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||| ||||||||| | || ||| | ||||||||||||||||||||||||| ||||| |||||||||    
T  18182439 gtttagcaaatatgcaatgttgttaaagaaatgattatgatgttaatttatgattcacaattacattgatta 18182368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 20871479 - 20871550
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||   || ||| | ||||||||||||||||||||||||||||| | |||||||||    
T  20871479 gtttagcaattatgcaatgtcgttaaagaaatgattatgatgttaatttatgattcgcaactacattgatta 20871550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 12703882 - 12703920
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattga 76  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  12703882 atgattatgatgttaatttatgattcgcaattacattga 12703920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 16407769 - 16407810
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||| ||||| |||||||||    
T  16407769 atgattatgatgttaatttatgattcacaattacattgatta 16407810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 49051003 - 49050962
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||| |||||||||||||||||||| |||||||||    
T  49051003 atgattatgatattaatttatgattcgcaattacattgatta 49050962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 79
Target Start/End: Complemental strand, 21287 - 21253
Alignment:
Q  45 tgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||||||||| |||||||||    
T  21287 tgatgttaatttatgattcgcaattacattgatta 21253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 79
Target Start/End: Original strand, 8202575 - 8202609
Alignment:
Q  45 tgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||||||||| |||||||||    
T  8202575 tgatgttaatttatgattcgcaattacattgatta 8202609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 79
Target Start/End: Complemental strand, 15021734 - 15021700
Alignment:
Q  45 tgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||||||||| |||||||||    
T  15021734 tgatgttaatttatgattcgcaattacattgatta 15021700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 8705607 - 8705567
Alignment:
Q  39 tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||| ||||||||||||||||||  ||||||||||||||    
T  8705607 tgattaggatgttaatttatgattcttaattgcattgatta 8705567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 8712278 - 8712238
Alignment:
Q  39 tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||| ||||||||||||||||||  ||||||||||||||    
T  8712278 tgattaggatgttaatttatgattcttaattgcattgatta 8712238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 8e-24; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 8e-24
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 26130129 - 26130058
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  26130129 gtttagcaattatgcaatgttatttaaggaatgattatgatgttaatttatgattcgcaattacattgatta 26130058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 2e-21
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 30694024 - 30693953
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||| |||||||||    
T  30694024 gtttagcaattatgcaatgttatttaagaaatgattatgatgttaatttatgattcgcaattacattgatta 30693953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 14054003 - 14054073
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatt 78  Q
    |||||||| |||||||| | || | ||||| ||||||||||||||||||||||||||||||| ||||||||    
T  14054003 gtttagcatttatgcaaagttaataaaggaatgattatgatgttaatttatgattcgcaattacattgatt 14054073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 6980292 - 6980251
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  6980292 atgattatgatgttaatttatgattcgcaattacattgatta 6980251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 18194630 - 18194671
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  18194630 atgattatgatgttaatttatgattcgcaattacattgatta 18194671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 20060281 - 20060240
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  20060281 atgattatgatgttaatttatgattcgcaattacattgatta 20060240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 27328531 - 27328572
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  27328531 atgattatgatgttaatttatgattcgcaattacattgatta 27328572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 27389271 - 27389312
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  27389271 atgattatgatgttaatttatgattcgcaattacattgatta 27389312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 30596857 - 30596816
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  30596857 atgattatgatgttaatttatgattcgcaattacattgatta 30596816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 30638626 - 30638667
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  30638626 atgattatgatgttaatttatgattcgcaattacattgatta 30638667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 8796853 - 8796782
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||| | || | | ||| ||||||||||||||||||||||||| ||||| |||||||||    
T  8796853 gtttagcaattatgcaaagttaataatggaatgattatgatgttaatttatgattctcaattacattgatta 8796782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 14098247 - 14098177
Alignment:
Q  9 gtttagcaattatgcaatgctatttaaggatgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||| ||| | | |||||| |||||||| |||||||||||||||||| |||| || ||||||    
T  14098247 gtttagcaattatacaaagttgtttaagaatgattataatgttaatttatgattcgtaattacactgatta 14098177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 4233946 - 4233987
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||| ||||| |||||||||    
T  4233946 atgattatgatgttaatttatgattcacaattacattgatta 4233987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 20801419 - 20801348
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||| | || | | ||| ||| ||||||||||||||||||||| ||||| |||||||||    
T  20801419 gtttagcaattatgcaaagttagtaatggaatgaatatgatgttaatttatgattctcaattacattgatta 20801348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 25471702 - 25471635
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattg 75  Q
    ||||||||||||||||| | || | | ||| ||||||||||||||||||||||||| ||||| |||||    
T  25471702 gtttagcaattatgcaaagttaataatggaatgattatgatgttaatttatgattctcaattacattg 25471635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 27185354 - 27185287
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattg 75  Q
    ||||||||||||||||| | || | | ||| ||||||||||||||||||||||||| ||||| |||||    
T  27185354 gtttagcaattatgcaaagttaataatggaatgattatgatgttaatttatgattctcaattacattg 27185287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 27207190 - 27207123
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattg 75  Q
    ||||||||||||||||| | || | | ||| ||||||||||||||||||||||||| ||||| |||||    
T  27207190 gtttagcaattatgcaaagttaataatggaatgattatgatgttaatttatgattctcaattacattg 27207123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 27242038 - 27242105
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattg 75  Q
    ||||||||||||||||| | || | | ||| ||||||||||||||||||||||||| ||||| |||||    
T  27242038 gtttagcaattatgcaaagttaataatggaatgattatgatgttaatttatgattctcaattacattg 27242105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 27263886 - 27263953
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattg 75  Q
    ||||||||||||||||| | || | | ||| ||||||||||||||||||||||||| ||||| |||||    
T  27263886 gtttagcaattatgcaaagttaataatggaatgattatgatgttaatttatgattctcaattacattg 27263953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 79
Target Start/End: Complemental strand, 8228492 - 8228458
Alignment:
Q  45 tgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||||||||| |||||||||    
T  8228492 tgatgttaatttatgattcgcaattacattgatta 8228458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 79
Target Start/End: Complemental strand, 18930682 - 18930648
Alignment:
Q  45 tgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||||||||| |||||||||    
T  18930682 tgatgttaatttatgattcgcaattacattgatta 18930648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 1545531 - 1545572
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||| |||||||||| |||| |||||||||    
T  1545531 atgattatgatgttaacttatgattcgtaattacattgatta 1545572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 12762335 - 12762295
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||| ||||||||||||| |||||||||    
T  12762335 atgattatgatgttaatt-atgattcgcaattacattgatta 12762295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 32565736 - 32565776
Alignment:
Q  39 tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||| ||||||||||||||||||  ||||||||||||||    
T  32565736 tgattaggatgttaatttatgattcttaattgcattgatta 32565776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 1539402 - 1539473
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||| | | || ||| | ||||||||||||||| ||| |||||| |||| |||||||||    
T  1539402 gtttagcaattatgcaaagttgttaaagaaatgattatgatgttaacttaagattcgtaattacattgatta 1539473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 16552515 - 16552554
Alignment:
Q  40 gattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||| ||||||||||||||||||  ||||||||||||||    
T  16552515 gattaagatgttaatttatgattcttaattgcattgatta 16552554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 16576438 - 16576399
Alignment:
Q  40 gattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||| ||||||||||||||||||  ||||||||||||||    
T  16576438 gattaagatgttaatttatgattcttaattgcattgatta 16576399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 16618942 - 16618981
Alignment:
Q  40 gattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||| ||||||||||||||||||  ||||||||||||||    
T  16618942 gattaagatgttaatttatgattcttaattgcattgatta 16618981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 16629071 - 16629110
Alignment:
Q  40 gattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||| ||||||||||||||||||  ||||||||||||||    
T  16629071 gattaagatgttaatttatgattcttaattgcattgatta 16629110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 8e-24; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 8e-24
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 19991545 - 19991474
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  19991545 gtttagcaattatgcaatgttatttaaggaatgattatgatgttaatttatgattcgcaattacattgatta 19991474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 8e-24
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 22328607 - 22328678
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  22328607 gtttagcaattatgcaatgttatttaaggaatgattatgatgttaatttatgattcgcaattacattgatta 22328678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 8e-24
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 22342038 - 22342109
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  22342038 gtttagcaattatgcaatgttatttaaggaatgattatgatgttaatttatgattcgcaattacattgatta 22342109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 2e-21
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 1692880 - 1692951
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||| |||||||||    
T  1692880 gtttagcaattatgcaatgttatttaaggaatgattatgatgttaatttataattcgcaattacattgatta 1692951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 2e-21
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 18039112 - 18039183
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||| |||||||||    
T  18039112 gtttagcaattatgcaatgttatttaaggaatgattatgatgttaatttataattcgcaattacattgatta 18039183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 2e-21
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 27681130 - 27681201
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||| |||||||||    
T  27681130 gtttagcaattatgcaatgttatttaaggaatgattatgatgttaatttataattcgcaattacattgatta 27681201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 2e-21
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 27687772 - 27687843
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||| |||||||||    
T  27687772 gtttagcaattatgcaatgttatttaaggaatgattatgatgttaatttataattcgcaattacattgatta 27687843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 2e-21
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 37287225 - 37287296
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  37287225 gtttagcatttatgcaatgttatttaaggaatgattatgatgttaatttatgattcgcaattacattgatta 37287296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 2e-21
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 37293928 - 37293999
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  37293928 gtttagcatttatgcaatgttatttaaggaatgattatgatgttaatttatgattcgcaattacattgatta 37293999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 5e-19
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 14995481 - 14995552
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||| ||||||||| || ||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  14995481 gtttagcaaatatgcaatgttaattaaggaatgattatgatgttaatttatgattcgcaattacattgatta 14995552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 15002124 - 15002195
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||| ||||||||| || ||||||| ||||||||||||||||||||||||| ||||| |||||||||    
T  15002124 gtttagcaaatatgcaatgttaattaaggaatgattatgatgttaatttatgattcacaattacattgatta 15002195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 22587757 - 22587686
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| | || ||| | ||||||||||||||||||||||||||||||| |||||||||    
T  22587757 gtttagcaattatgcaatgttgttaaagtaatgattatgatgttaatttatgattcgcaattacattgatta 22587686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 17283729 - 17283658
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| | || ||| | ||||||||||||||||||||||||||||||| || ||||||    
T  17283729 gtttagcaattatgcaatgttgttaaagaaatgattatgatgttaatttatgattcgcaattacactgatta 17283658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 22132659 - 22132588
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||| |||||||||| | || ||| | ||||||||||||||||||||||||||||||| |||||||||    
T  22132659 gtttagcatttatgcaatgttgttaaagaaatgattatgatgttaatttatgattcgcaattacattgatta 22132588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 22139351 - 22139280
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||| |||||||||| | || ||| | ||||||||||||||||||||||||||||||| |||||||||    
T  22139351 gtttagcatttatgcaatgttgttaaagaaatgattatgatgttaatttatgattcgcaattacattgatta 22139280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 29471803 - 29471874
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| | || ||| | |||||||||||||||||||||||||||| || |||||||||    
T  29471803 gtttagcaattatgcaatgttgttaaagaaatgattatgatgttaatttatgattcgcagttacattgatta 29471874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 29478398 - 29478469
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| | || ||| | |||||||||||||||||||||||||||| || |||||||||    
T  29478398 gtttagcaattatgcaatgttgttaaagaaatgattatgatgttaatttatgattcgcagttacattgatta 29478469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 25406087 - 25406015
Alignment:
Q  8 cgtttagcaattatgcaatgctatttaagga--tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||  | || |||||  ||||||||||||||||||||||||||||||| |||||||||    
T  25406087 cgtttagcaattatgcaattttgtt-aaggaaatgattatgatgttaatttatgattcgcaattacattgatta 25406015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 17707403 - 17707444
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  17707403 atgattatgatgttaatttatgattcgcaattacattgatta 17707444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 22264582 - 22264541
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  22264582 atgattatgatgttaatttatgattcgcaattacattgatta 22264541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 23609560 - 23609519
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  23609560 atgattatgatgttaatttatgattcgcaattacattgatta 23609519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 23840956 - 23840915
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  23840956 atgattatgatgttaatttatgattcgcaattacattgatta 23840915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 24472721 - 24472762
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  24472721 atgattatgatgttaatttatgattcgcaattacattgatta 24472762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 27608371 - 27608330
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  27608371 atgattatgatgttaatttatgattcgcaattacattgatta 27608330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 27614977 - 27614936
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  27614977 atgattatgatgttaatttatgattcgcaattacattgatta 27614936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 27664264 - 27664305
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  27664264 atgattatgatgttaatttatgattcgcaattacattgatta 27664305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 27670903 - 27670944
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  27670903 atgattatgatgttaatttatgattcgcaattacattgatta 27670944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 34295027 - 34295068
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  34295027 atgattatgatgttaatttatgattcgcaattacattgatta 34295068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 41098697 - 41098738
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  41098697 atgattatgatgttaatttatgattcgcaattacattgatta 41098738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 41294908 - 41294949
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||| |||||||||||||||||||||||| |||||||||    
T  41294908 atgattaggatgttaatttatgattcgcaattacattgatta 41294949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 23583768 - 23583729
Alignment:
Q  40 gattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||||||||| |||| |||||||||    
T  23583768 gattatgatgttaatttatgattcgtaattacattgatta 23583729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 37543701 - 37543630
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||| | || | | ||| ||| ||||||||||||||||||||| ||||| |||||||||    
T  37543701 gtttagcaattatgcaaagttagtaatggaatgaatatgatgttaatttatgattctcaattacattgatta 37543630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 79
Target Start/End: Complemental strand, 25106389 - 25106355
Alignment:
Q  45 tgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||||||||| |||||||||    
T  25106389 tgatgttaatttatgattcgcaattacattgatta 25106355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 79
Target Start/End: Complemental strand, 25165482 - 25165448
Alignment:
Q  45 tgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||||||||| |||||||||    
T  25165482 tgatgttaatttatgattcgcaattacattgatta 25165448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 79
Target Start/End: Complemental strand, 27516378 - 27516344
Alignment:
Q  45 tgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||||||||| |||||||||    
T  27516378 tgatgttaatttatgattcgcaattacattgatta 27516344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 79
Target Start/End: Complemental strand, 27523015 - 27522981
Alignment:
Q  45 tgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||||||||| |||||||||    
T  27523015 tgatgttaatttatgattcgcaattacattgatta 27522981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 20775498 - 20775457
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||| |||||||||||||||||  ||||||||||||||    
T  20775498 atgattataatgttaatttatgattcttaattgcattgatta 20775457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 22063300 - 22063340
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||| ||||||||||||| |||||||||    
T  22063300 atgattatgatgttaatt-atgattcgcaattacattgatta 22063340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 21668300 - 21668340
Alignment:
Q  39 tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||| ||||||||||||||||||  ||||||||||||||    
T  21668300 tgattaggatgttaatttatgattcttaattgcattgatta 21668340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 29316073 - 29316033
Alignment:
Q  39 tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||| ||||||||||||||||||  ||||||||||||||    
T  29316073 tgattaggatgttaatttatgattcttaattgcattgatta 29316033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 8e-24; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 8e-24
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 14299273 - 14299344
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  14299273 gtttagcaattatgcaatgttatttaaggaatgattatgatgttaatttatgattcgcaattacattgatta 14299344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 8e-24
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 14305870 - 14305941
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  14305870 gtttagcaattatgcaatgttatttaaggaatgattatgatgttaatttatgattcgcaattacattgatta 14305941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 386775 - 386846
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| | || ||| | ||||||||||||||||||||||||||||||| |||||||||    
T  386775 gtttagcaattatgcaatgttgttaaagaaatgattatgatgttaatttatgattcgcaattacattgatta 386846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 26285353 - 26285424
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| | || ||| | ||||||||||||||||||||||||||||||| |||||||||    
T  26285353 gtttagcaattatgcaatgttgttaaagaaatgattatgatgttaatttatgattcgcaattacattgatta 26285424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 40477753 - 40477682
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| | || ||| | ||||||||||||||||||||||||||||||| |||||||||    
T  40477753 gtttagcaattatgcaatgttgttaaagaaatgattatgatgttaatttatgattcgcaattacattgatta 40477682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 6873822 - 6873893
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||| || | || ||| | ||||||||||||||||||||||||||||||| |||||||||    
T  6873822 gtttagcaattatgcagtgttgttaaagaaatgattatgatgttaatttatgattcgcaattacattgatta 6873893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 22194252 - 22194209
Alignment:
Q  36 ggatgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  22194252 ggatgattatgatgttaatttatgattcgcaattacattgatta 22194209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 40453524 - 40453453
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| | || ||| | |||||||||||||||||||||||||||| || |||||||||    
T  40453524 gtttagcaattatgcaatgttgttaaagaaatgattatgatgttaatttatgattcgcagttacattgatta 40453453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 51494253 - 51494324
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| | || ||| | |||||||||||||||||||||||||||||||  ||||||||    
T  51494253 gtttagcaattatgcaatgttgttaaagaaatgattatgatgttaatttatgattcgcaattatattgatta 51494324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 3107974 - 3108015
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  3107974 atgattatgatgttaatttatgattcgcaattacattgatta 3108015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 15148088 - 15148047
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  15148088 atgattatgatgttaatttatgattcgcaattacattgatta 15148047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 17962822 - 17962863
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  17962822 atgattatgatgttaatttatgattcgcaattacattgatta 17962863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 19780764 - 19780805
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  19780764 atgattatgatgttaatttatgattcgcaattacattgatta 19780805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 23953778 - 23953737
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  23953778 atgattatgatgttaatttatgattcgcaattacattgatta 23953737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 23960440 - 23960399
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  23960440 atgattatgatgttaatttatgattcgcaattacattgatta 23960399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 36885209 - 36885250
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  36885209 atgattatgatgttaatttatgattcgcaattacattgatta 36885250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 7901660 - 7901701
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||||||||||| |||| |||||||||    
T  7901660 atgattatgatgttaatttatgattcgtaattacattgatta 7901701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 12474651 - 12474610
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||| ||||||||||||||| |||||||||    
T  12474651 atgattatgatgttaaattatgattcgcaattacattgatta 12474610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 12481281 - 12481240
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||| ||||||||||||||| |||||||||    
T  12481281 atgattatgatgttaaattatgattcgcaattacattgatta 12481240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 15361763 - 15361722
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||| ||||||||||||||||||||||| |||||||||    
T  15361763 atgattataatgttaatttatgattcgcaattacattgatta 15361722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 16232317 - 16232358
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||| ||||||||||||||||||||||| |||||||||    
T  16232317 atgattataatgttaatttatgattcgcaattacattgatta 16232358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 18024902 - 18024943
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||| ||||||||||||||| |||||||||    
T  18024902 atgattatgatgttaaattatgattcgcaattacattgatta 18024943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 9272615 - 9272686
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||| | | || ||| | |||||||||||| || ||||||||||||||| |||||||||    
T  9272615 gtttagcaattatgcaaagttgttaaagaaatgattatgatgtcaacttatgattcgcaattacattgatta 9272686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 15322552 - 15322623
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||| | | || ||| | ||||||||||||||| |||||||||| |||| |||||||||    
T  15322552 gtttagcaattatgcaaagttgttaaagaaatgattatgatgttaacttatgattcgtaattacattgatta 15322623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 79
Target Start/End: Complemental strand, 8384439 - 8384405
Alignment:
Q  45 tgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||||||||| |||||||||    
T  8384439 tgatgttaatttatgattcgcaattacattgatta 8384405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 79
Target Start/End: Complemental strand, 8391094 - 8391060
Alignment:
Q  45 tgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||||||||| |||||||||    
T  8391094 tgatgttaatttatgattcgcaattacattgatta 8391060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 79
Target Start/End: Complemental strand, 15256213 - 15256179
Alignment:
Q  45 tgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||||||||| |||||||||    
T  15256213 tgatgttaatttatgattcgcaattacattgatta 15256179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 79
Target Start/End: Original strand, 17090479 - 17090513
Alignment:
Q  45 tgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||||||||| |||||||||    
T  17090479 tgatgttaatttatgattcgcaattacattgatta 17090513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 79
Target Start/End: Complemental strand, 17808018 - 17807984
Alignment:
Q  45 tgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||||||||| |||||||||    
T  17808018 tgatgttaatttatgattcgcaattacattgatta 17807984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 12350068 - 12350108
Alignment:
Q  39 tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||| ||||||||||||||||||  ||||||||||||||    
T  12350068 tgattaggatgttaatttatgattcttaattgcattgatta 12350108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 8e-24; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 8e-24
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 1842743 - 1842672
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  1842743 gtttagcaattatgcaatgttatttaaggaatgattatgatgttaatttatgattcgcaattacattgatta 1842672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 8e-24
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 27598925 - 27598854
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  27598925 gtttagcaattatgcaatgttatttaaggaatgattatgatgttaatttatgattcgcaattacattgatta 27598854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 12828731 - 12828662
Alignment:
Q  11 ttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||| | || ||| | ||||||||||||||||||||||||||||||| |||||||||    
T  12828731 ttagcaattatgcaatgttgttaaagaaatgattatgatgttaatttatgattcgcaattacattgatta 12828662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 23170699 - 23170628
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||| |||||| | || ||| | ||||||||||||||||||||||||||||||| |||||||||    
T  23170699 gtttagcaattacgcaatgttgttaaagaaatgattatgatgttaatttatgattcgcaattacattgatta 23170628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 23581956 - 23581885
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||| |||||| | || ||| | ||||||||||||||||||||||||||||||| |||||||||    
T  23581956 gtttagcaattacgcaatgttgttaaagaaatgattatgatgttaatttatgattcgcaattacattgatta 23581885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 19490363 - 19490404
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  19490363 atgattatgatgttaatttatgattcgcaattacattgatta 19490404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 22321461 - 22321502
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  22321461 atgattatgatgttaatttatgattcgcaattacattgatta 22321502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 22327614 - 22327655
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  22327614 atgattatgatgttaatttatgattcgcaattacattgatta 22327655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 26878041 - 26878082
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  26878041 atgattatgatgttaatttatgattcgcaattacattgatta 26878082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 27616929 - 27616888
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  27616929 atgattatgatgttaatttatgattcgcaattacattgatta 27616888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 28432408 - 28432449
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  28432408 atgattatgatgttaatttatgattcgcaattacattgatta 28432449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 29233175 - 29233134
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  29233175 atgattatgatgttaatttatgattcgcaattacattgatta 29233134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 29346474 - 29346433
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  29346474 atgattatgatgttaatttatgattcgcaattacattgatta 29346433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 24914410 - 24914482
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgat-gttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| | || ||| | |||||||||| ||||||||||||||||||||| |||||||||    
T  24914410 gtttagcaattatgcaatgttgttaaagaaatgattatgattgttaatttatgattcgcaattacattgatta 24914482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 79
Target Start/End: Complemental strand, 24261608 - 24261571
Alignment:
Q  42 ttatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||| |||||||||    
T  24261608 ttatgatgttaatttatgattcgcaattacattgatta 24261571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 79
Target Start/End: Complemental strand, 24266691 - 24266654
Alignment:
Q  42 ttatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||| |||||||||    
T  24266691 ttatgatgttaatttatgattcgcaattacattgatta 24266654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 10865835 - 10865764
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||| | || | | ||| |||||||| |||||||||||||||| ||||| |||||||||    
T  10865835 gtttagcaattatgcaaagttaataatggaatgattatgttgttaatttatgattctcaattacattgatta 10865764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 10873200 - 10873129
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||| | || | | ||| |||||||| |||||||||||||||| ||||| |||||||||    
T  10873200 gtttagcaattatgcaaagttaataatggaatgattatgttgttaatttatgattctcaattacattgatta 10873129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 79
Target Start/End: Complemental strand, 27212242 - 27212207
Alignment:
Q  44 atgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||| |||||||||    
T  27212242 atgatgttaatttatgattcgcaattacattgatta 27212207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 79
Target Start/End: Complemental strand, 16922137 - 16922103
Alignment:
Q  45 tgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||||||||| |||||||||    
T  16922137 tgatgttaatttatgattcgcaattacattgatta 16922103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 13307056 - 13307126
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||| |||||||| |||| | | ||| || |||||||||||||| ||||||||||||| |||||||||    
T  13307056 gtttagcatttatgcaaagctaataatggaatgtttatgatgttaatt-atgattcgcaattacattgatta 13307126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 27368913 - 27368874
Alignment:
Q  40 gattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||| ||||||||||||||||||  ||||||||||||||    
T  27368913 gattaagatgttaatttatgattcttaattgcattgatta 27368874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 5e-19; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 5e-19
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 16490108 - 16490179
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||| ||||||||| ||| |||||| ||||||||||||||||||||||||||||||| |||||||||    
T  16490108 gtttagcaaatatgcaatgttatctaaggaatgattatgatgttaatttatgattcgcaattacattgatta 16490179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 15711846 - 15711917
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| | || ||| | ||||||||||||||||||||||||||||||| |||||||||    
T  15711846 gtttagcaattatgcaatgttgttaaagaaatgattatgatgttaatttatgattcgcaattacattgatta 15711917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 15727488 - 15727559
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| | || ||| | ||||||||||||||||||||||||||||||| |||||||||    
T  15727488 gtttagcaattatgcaatgttgttaaagaaatgattatgatgttaatttatgattcgcaattacattgatta 15727559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 23705210 - 23705281
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||| ||||||||||||| | || ||| | ||||||||||||||||||||||||||||||| |||||||||    
T  23705210 gtttatcaattatgcaatgttgttaaagaaatgattatgatgttaatttatgattcgcaattacattgatta 23705281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 23723666 - 23723737
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||| ||||||||||||| | || ||| | ||||||||||||||||||||||||||||||| |||||||||    
T  23723666 gtttatcaattatgcaatgttgttaaagaaatgattatgatgttaatttatgattcgcaattacattgatta 23723737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 23742122 - 23742193
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||| ||||||||||||| | || ||| | ||||||||||||||||||||||||||||||| |||||||||    
T  23742122 gtttatcaattatgcaatgttgttaaagaaatgattatgatgttaatttatgattcgcaattacattgatta 23742193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 41202240 - 41202311
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| | || ||| | ||||||||||||||||||||||||| ||||| |||||||||    
T  41202240 gtttagcaattatgcaatgttgttaaagaaatgattatgatgttaatttatgattcacaattacattgatta 41202311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 5107358 - 5107399
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  5107358 atgattatgatgttaatttatgattcgcaattacattgatta 5107399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 5221051 - 5221010
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  5221051 atgattatgatgttaatttatgattcgcaattacattgatta 5221010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 26196033 - 26196074
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  26196033 atgattatgatgttaatttatgattcgcaattacattgatta 26196074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 26889087 - 26889046
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  26889087 atgattatgatgttaatttatgattcgcaattacattgatta 26889046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 37615024 - 37614983
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  37615024 atgattatgatgttaatttatgattcgcaattacattgatta 37614983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 20057847 - 20057918
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||| | || | | ||| ||||||||||||||||||||||||| ||||| |||||||||    
T  20057847 gtttagcaattatgcaaagttaataatggaatgattatgatgttaatttatgattctcaattacattgatta 20057918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 20064485 - 20064556
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||| | || | | ||| ||||||||||||||||||||||||| ||||| |||||||||    
T  20064485 gtttagcaattatgcaaagttaataatggaatgattatgatgttaatttatgattctcaattacattgatta 20064556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 417633 - 417592
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||| ||||||||||||||| |||||||||    
T  417633 atgattatgatgttaaattatgattcgcaattacattgatta 417592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 6596890 - 6596849
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||| ||||| |||||||||    
T  6596890 atgattatgatgttaatttatgattctcaattacattgatta 6596849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 10154257 - 10154298
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||| |||||||||||||||||||||||| |||||||||    
T  10154257 atgattaagatgttaatttatgattcgcaattacattgatta 10154298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 14673673 - 14673714
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||| ||||||||||||||| |||||||||    
T  14673673 atgattatgatgttaaattatgattcgcaattacattgatta 14673714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 22643777 - 22643818
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||| ||||||||||||||| |||||||||    
T  22643777 atgattatgatgttaacttatgattcgcaattacattgatta 22643818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 16624525 - 16624568
Alignment:
Q  36 ggatgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||| ||||||||||||||||||||| ||||| |||||||||    
T  16624525 ggatgaatatgatgttaatttatgattctcaattacattgatta 16624568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 31423029 - 31423068
Alignment:
Q  40 gattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||||||||||| || |||||||||    
T  31423029 gattatgatgttaatttatgattcgcagttacattgatta 31423068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 41092834 - 41092873
Alignment:
Q  40 gattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||||||||| |||| |||||||||    
T  41092834 gattatgatgttaatttatgattcgtaattacattgatta 41092873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 79
Target Start/End: Original strand, 1333560 - 1333594
Alignment:
Q  45 tgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||||||||| |||||||||    
T  1333560 tgatgttaatttatgattcgcaattacattgatta 1333594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 5150425 - 5150495
Alignment:
Q  9 gtttagcaattatgcaatgctatttaaggatgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||| | | || |   ||||||||||| ||||||||||||||| |||| |||||||||    
T  5150425 gtttagcaattatgcaaagttgttaagaaatgattatgattttaatttatgattcgtaattacattgatta 5150495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 3690251 - 3690210
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||| ||||||||||||||||||||| ||||| |||||||||    
T  3690251 atgaatatgatgttaatttatgattctcaattacattgatta 3690210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 6598351 - 6598310
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||| ||||| || ||||||    
T  6598351 atgattatgatgttaatttatgattctcaattacactgatta 6598310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 6605031 - 6604990
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||| ||||| || ||||||    
T  6605031 atgattatgatgttaatttatgattctcaattacactgatta 6604990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 6608122 - 6608054
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga--tgattatgatgttaatttatgattcgcaattgcattg 75  Q
    ||||||||||||||||| |||| |||| ||  ||| ||||||||||| |||||||||  ||||||||||    
T  6608122 gtttagcaattatgcaaagctaattaatgaaatgactatgatgttaacttatgattcttaattgcattg 6608054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 5200839 - 5200799
Alignment:
Q  39 tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||| ||||||||||||||||||  ||||||||||||||    
T  5200839 tgattaggatgttaatttatgattcttaattgcattgatta 5200799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 12482041 - 12482001
Alignment:
Q  39 tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||| ||||||||||||||||||  ||||||||||||||    
T  12482041 tgattaggatgttaatttatgattcttaattgcattgatta 12482001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 5e-19; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 5e-19
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 18600550 - 18600621
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||| ||||||||| ||| |||||| ||||||||||||||||||||||||||||||| |||||||||    
T  18600550 gtttagcaaatatgcaatgttatctaaggaatgattatgatgttaatttatgattcgcaattacattgatta 18600621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.000000000000007
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 21828376 - 21828304
Alignment:
Q  8 cgtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||| | || ||| | |||||||||||||||||||||||| |||||| |||||||||    
T  21828376 cgtttagcaattatgcaatgttgttaaagaaatgattatgatgttaatttatgatttgcaattacattgatta 21828304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.000000000000007
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 21843950 - 21843878
Alignment:
Q  8 cgtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||| | || ||| | |||||||||||||||||||||||| |||||| |||||||||    
T  21843950 cgtttagcaattatgcaatgttgttaaagaaatgattatgatgttaatttatgatttgcaattacattgatta 21843878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 20216401 - 20216442
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  20216401 atgattatgatgttaatttatgattcgcaattacattgatta 20216442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 44845358 - 44845399
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  44845358 atgattatgatgttaatttatgattcgcaattacattgatta 44845399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 41349295 - 41349366
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||| | || | | ||| |||||||| |||||||||||||||| ||||| |||||||||    
T  41349295 gtttagcaattatgcaaagttaataatggaatgattatgttgttaatttatgattctcaattacattgatta 41349366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 79
Target Start/End: Original strand, 46157821 - 46157855
Alignment:
Q  45 tgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||||||||| |||||||||    
T  46157821 tgatgttaatttatgattcgcaattacattgatta 46157855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 16346249 - 16346290
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||| ||||||||||||||||||||| ||||| |||||||||    
T  16346249 atgaatatgatgttaatttatgattctcaattacattgatta 16346290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 16352898 - 16352939
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||| ||||||||||||||||||||| ||||| |||||||||    
T  16352898 atgaatatgatgttaatttatgattctcaattacattgatta 16352939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 27899153 - 27899193
Alignment:
Q  39 tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||| ||||||||||||||||||  ||||||||||||||    
T  27899153 tgattaggatgttaatttatgattcttaattgcattgatta 27899193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 41479034 - 41479070
Alignment:
Q  43 tatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||| |||||||||| |||||||||    
T  41479034 tatgatgttaatttataattcgcaattacattgatta 41479070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 43063770 - 43063810
Alignment:
Q  39 tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||| ||||||||||||||||||  ||||||||||||||    
T  43063770 tgattaggatgttaatttatgattcttaattgcattgatta 43063810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 44755717 - 44755677
Alignment:
Q  39 tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||| ||||||||||||||||||  ||||||||||||||    
T  44755717 tgattaggatgttaatttatgattcttaattgcattgatta 44755677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 49334184 - 49334144
Alignment:
Q  39 tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||| ||||||||||||||||||  ||||||||||||||    
T  49334184 tgattaggatgttaatttatgattcttaattgcattgatta 49334144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 33384681 - 33384642
Alignment:
Q  40 gattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||| ||||||||||||||||||  ||||||||||||||    
T  33384681 gattaagatgttaatttatgattcttaattgcattgatta 33384642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 41356732 - 41356803
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||| | || | | ||| |||||||| | |||||||||||||| ||||| |||||||||    
T  41356732 gtttagcaattatgcaaagttaataatggaatgattatgttattaatttatgattctcaattacattgatta 41356803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 44; Significance: 1e-16; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 7722 - 7651
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| | || ||| | ||||||||||||||||||||||||||||||| |||||||||    
T  7722 gtttagcaattatgcaatgttgttaaagaaatgattatgatgttaatttatgattcgcaattacattgatta 7651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 30157 - 30116
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  30157 atgattatgatgttaatttatgattcgcaattacattgatta 30116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 44; Significance: 1e-16; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 306759 - 306688
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| | || ||| | ||||||||||||||||||||||||||||||| |||||||||    
T  306759 gtttagcaattatgcaatgttgttaaagaaatgattatgatgttaatttatgattcgcaattacattgatta 306688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557 (Bit Score: 38; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 8 - 49
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  8 atgattatgatgttaaattatgattcgcaattgcattgatta 49  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 38; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 11980 - 11939
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  11980 atgattatgatgttaatttatgattcgcaattacattgatta 11939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 38; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 38313 - 38272
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  38313 atgattatgatgttaatttatgattcgcaattacattgatta 38272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 38; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 59935 - 59976
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  59935 atgattatgatgttaatttatgattcgcaattacattgatta 59976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 38; Significance: 0.0000000000004; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 67140 - 67099
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  67140 atgattatgatgttaatttatgattcgcaattacattgatta 67099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 41242 - 41171
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||| | | || ||| | ||||||||||||||| |||||||||| |||| |||||||||    
T  41242 gtttagcaattatgcaaagttgttaaagaaatgattatgatgttaacttatgattcgtaattacattgatta 41171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 56749 - 56678
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||| | | || ||| | ||||||||||||||| |||||||||| |||| |||||||||    
T  56749 gtttagcaattatgcaaagttgttaaagaaatgattatgatgttaacttatgattcgtaattacattgatta 56678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 38; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 138698 - 138657
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  138698 atgattatgatgttaatttatgattcgcaattacattgatta 138657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 36; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 10260 - 10331
Alignment:
Q  9 gtttagcaattatgcaatgctatttaaggat-gattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||| | || ||| |  |||||||||||||||||||||||||||||| || ||||||    
T  10260 gtttagcaattatgcaatgttgttaaagaaacgattatgatgttaatttatgattcgcaattacaatgatta 10331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 36; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 106330 - 106401
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||| | | || ||| | ||||||||||||||| ||||||||||||||| |||||||||    
T  106330 gtttagcaattatgcaaagttgttaaagaaatgattatgatgttaacttatgattcgcaattacattgatta 106401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 36; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 126564 - 126635
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||| | | || ||| | ||||||||||||||| ||||||||||||||| |||||||||    
T  126564 gtttagcaattatgcaaagttgttaaagaaatgattatgatgttaacttatgattcgcaattacattgatta 126635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 35; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 26286 - 26216
Alignment:
Q  10 tttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||| | | || ||| | ||||||||||||||| ||||||||||||||| |||||||||    
T  26286 tttagcaattatgcaaagttgttaaagaaatgattatgatgttaacttatgattcgcaattacattgatta 26216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 34; Significance: 0.0000000001; HSPs: 3)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 1528 - 1569
Alignment:
Q  38 atgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||||||||||||||||||||||| ||||| |||||||||    
T  1528 atgattatgatgttaatttatgattcacaattacattgatta 1569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #2
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 79
Target Start/End: Complemental strand, 9964 - 9930
Alignment:
Q  45 tgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||||||||| |||||||||    
T  9964 tgatgttaatttatgattcgcaattacattgatta 9930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #3
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 79
Target Start/End: Complemental strand, 56386 - 56352
Alignment:
Q  45 tgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||||||||| |||||||||    
T  56386 tgatgttaatttatgattcgcaattacattgatta 56352  T

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Target: scaffold0229 (Bit Score: 32; Significance: 0.000000002; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 12197 - 12268
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||| | || | | ||| ||| ||||||||||||||||||||| ||||| |||||||||    
T  12197 gtttagcaattatgcaaagttagtaatggaatgaatatgatgttaatttatgattctcaattacattgatta 12268  T

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Target: scaffold0141 (Bit Score: 32; Significance: 0.000000002; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 37703 - 37632
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||| | || | | ||| |||||||| |||||||||||||||| ||||| |||||||||    
T  37703 gtttagcaattatgcaaagttaataatggaatgattatgttgttaatttatgattctcaattacattgatta 37632  T

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Target: scaffold0049 (Bit Score: 32; Significance: 0.000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 77109 - 77180
Alignment:
Q  9 gtttagcaattatgcaatgctatttaagga-tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||| | || | | ||| |||||||| |||||||||||||||| ||||| |||||||||    
T  77109 gtttagcaattatgcaaagttaataatggaatgattatgttgttaatttatgattctcaattacattgatta 77180  T

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Target: scaffold0055 (Bit Score: 31; Significance: 0.000000007; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 79
Target Start/End: Complemental strand, 24975 - 24941
Alignment:
Q  45 tgatgttaatttatgattcgcaattgcattgatta 79  Q
    ||||||||||||||||||||||||| |||||||||    
T  24975 tgatgttaatttatgattcgcaattacattgatta 24941  T

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Target: scaffold0126 (Bit Score: 29; Significance: 0.0000001; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 4572 - 4612
Alignment:
Q  39 tgattatgatgttaatttatgattcgcaattgcattgatta 79  Q
    |||||| ||||||||||||||||||  ||||||||||||||    
T  4572 tgattaggatgttaatttatgattcttaattgcattgatta 4612  T

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