View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: F9332-LTR4-TNT-insertion-3 (Length: 614)

Name: F9332-LTR4-TNT-insertion-3
Description: F9332-LTR4
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] F9332-LTR4-TNT-insertion-3
F9332-LTR4-TNT-insertion-3
[»] chr6 (45 HSPs)
chr6 (10-606)||(1818648-1819243)
chr6 (10-409)||(10445913-10446311)
chr6 (307-550)||(13285739-13285967)
chr6 (185-375)||(18459176-18459366)
chr6 (219-447)||(35057448-35057676)
chr6 (178-448)||(25921864-25922133)
chr6 (263-368)||(7217243-7217347)
chr6 (278-453)||(19825401-19825576)
chr6 (178-372)||(25601325-25601515)
chr6 (263-368)||(31734655-31734760)
chr6 (268-432)||(34140390-34140554)
chr6 (228-371)||(23431443-23431586)
chr6 (263-378)||(31166188-31166303)
chr6 (217-330)||(24506153-24506265)
chr6 (268-432)||(34153006-34153170)
chr6 (262-368)||(15998835-15998942)
chr6 (263-372)||(32259793-32259902)
chr6 (228-340)||(18982325-18982439)
chr6 (126-253)||(15891684-15891810)
chr6 (126-253)||(15900769-15900895)
chr6 (306-447)||(29045261-29045402)
chr6 (263-368)||(18455072-18455177)
chr6 (272-368)||(22557204-22557300)
chr6 (48-162)||(14993540-14993654)
chr6 (488-550)||(14993677-14993739)
chr6 (126-202)||(28288670-28288747)
chr6 (149-253)||(15173568-15173671)
chr6 (228-377)||(18982483-18982634)
chr6 (126-202)||(12942941-12943018)
chr6 (262-328)||(20410552-20410616)
chr6 (271-368)||(21683074-21683171)
chr6 (272-328)||(23658044-23658101)
chr6 (170-255)||(29045119-29045204)
chr6 (401-473)||(31166343-31166413)
chr6 (401-454)||(18454978-18455031)
chr6 (185-251)||(18585549-18585615)
chr6 (126-202)||(23956674-23956751)
chr6 (126-194)||(23415717-23415785)
chr6 (315-377)||(31629851-31629913)
chr6 (126-202)||(13765158-13765235)
chr6 (475-520)||(15285837-15285882)
chr6 (343-372)||(23501700-23501729)
chr6 (417-453)||(23658188-23658224)
chr6 (170-202)||(27557519-27557551)
chr6 (337-377)||(28948597-28948637)
[»] chr5 (37 HSPs)
chr5 (10-548)||(21503835-21504365)
chr5 (78-462)||(20313037-20313422)
chr5 (400-550)||(26758524-26758674)
chr5 (209-368)||(1626917-1627076)
chr5 (266-447)||(16063701-16063883)
chr5 (262-372)||(18744820-18744931)
chr5 (260-368)||(26749976-26750084)
chr5 (278-371)||(14025803-14025897)
chr5 (263-454)||(8503803-8503992)
chr5 (209-290)||(21398724-21398805)
chr5 (263-368)||(26762350-26762455)
chr5 (262-408)||(23199168-23199313)
chr5 (210-320)||(24068125-24068234)
chr5 (147-253)||(17011560-17011665)
chr5 (209-290)||(22111871-22111951)
chr5 (266-372)||(6551285-6551392)
chr5 (310-381)||(21404080-21404151)
chr5 (263-364)||(8833209-8833310)
chr5 (149-253)||(265872-265975)
chr5 (247-453)||(32607229-32607438)
chr5 (147-363)||(21398800-21399018)
chr5 (402-453)||(21398546-21398597)
chr5 (337-447)||(31622139-31622249)
chr5 (167-253)||(29448692-29448777)
chr5 (126-202)||(9776917-9776994)
chr5 (126-202)||(37804236-37804313)
chr5 (262-328)||(660736-660801)
chr5 (401-473)||(21404186-21404256)
chr5 (126-202)||(33472727-33472804)
chr5 (168-251)||(30138199-30138282)
chr5 (185-251)||(31456721-31456787)
chr5 (126-202)||(27868738-27868815)
chr5 (262-318)||(1627118-1627174)
chr5 (482-548)||(28710200-28710268)
chr5 (185-251)||(17875927-17875993)
chr5 (401-454)||(21299942-21299995)
chr5 (337-377)||(20566568-20566608)
[»] chr1 (55 HSPs)
chr1 (10-550)||(34392461-34393010)
chr1 (20-432)||(21187968-21188380)
chr1 (263-432)||(39061268-39061437)
chr1 (288-447)||(21243678-21243837)
chr1 (128-453)||(8306417-8306743)
chr1 (209-474)||(45499434-45499701)
chr1 (262-464)||(28476625-28476840)
chr1 (306-447)||(17901714-17901856)
chr1 (263-368)||(38887086-38887191)
chr1 (210-320)||(40390046-40390155)
chr1 (263-368)||(14792562-14792667)
chr1 (356-464)||(35895140-35895248)
chr1 (258-328)||(24719550-24719620)
chr1 (272-368)||(18121559-18121656)
chr1 (306-447)||(6834166-6834307)
chr1 (126-253)||(29763747-29763873)
chr1 (273-367)||(41225454-41225549)
chr1 (273-367)||(41226707-41226802)
chr1 (126-253)||(46197860-46197986)
chr1 (228-368)||(44892362-44892502)
chr1 (263-378)||(20708048-20708163)
chr1 (126-253)||(50001287-50001413)
chr1 (262-328)||(12710813-12710879)
chr1 (247-290)||(20588566-20588609)
chr1 (247-290)||(20593104-20593147)
chr1 (381-447)||(22823156-22823222)
chr1 (263-368)||(24007224-24007330)
chr1 (126-202)||(297167-297244)
chr1 (170-367)||(22145666-22145866)
chr1 (293-372)||(50544849-50544929)
chr1 (278-368)||(8275988-8276079)
chr1 (128-255)||(21239155-21239282)
chr1 (278-371)||(38056668-38056762)
chr1 (328-372)||(11808186-11808230)
chr1 (128-251)||(7052129-7052252)
chr1 (402-464)||(12710966-12711029)
chr1 (128-251)||(24723576-24723699)
chr1 (401-446)||(14237577-14237622)
chr1 (401-446)||(46560163-46560208)
chr1 (147-255)||(17901914-17902022)
chr1 (409-453)||(20846338-20846382)
chr1 (409-453)||(28193561-28193605)
chr1 (402-453)||(38056589-38056641)
chr1 (470-548)||(21496788-21496863)
chr1 (337-368)||(42697806-42697837)
chr1 (337-368)||(45755542-45755573)
chr1 (402-440)||(22350810-22350848)
chr1 (128-202)||(23194676-23194750)
chr1 (185-251)||(44822246-44822312)
chr1 (216-286)||(22350570-22350641)
chr1 (315-372)||(22350716-22350773)
chr1 (263-323)||(22823218-22823276)
chr1 (402-439)||(51083255-51083292)
chr1 (345-377)||(7320584-7320616)
chr1 (325-377)||(7703132-7703184)
[»] chr8 (48 HSPs)
chr8 (10-548)||(22610081-22610622)
chr8 (10-550)||(23883864-23884386)
chr8 (129-465)||(20879287-20879622)
chr8 (263-601)||(20516798-20517140)
chr8 (128-281)||(36732570-36732723)
chr8 (216-550)||(21678659-21678995)
chr8 (228-408)||(21579167-21579345)
chr8 (228-377)||(22474669-22474818)
chr8 (306-447)||(22483928-22484068)
chr8 (263-453)||(22208216-22208405)
chr8 (461-550)||(21676313-21676402)
chr8 (272-408)||(29762829-29762964)
chr8 (209-446)||(36305898-36306140)
chr8 (210-320)||(22966706-22966815)
chr8 (272-409)||(12037124-12037260)
chr8 (349-447)||(22345198-22345296)
chr8 (349-447)||(22356858-22356956)
chr8 (185-370)||(21676590-21676773)
chr8 (262-368)||(4380616-4380723)
chr8 (126-253)||(16198647-16198773)
chr8 (156-255)||(22483621-22483720)
chr8 (147-254)||(25657628-25657734)
chr8 (210-318)||(21697509-21697616)
chr8 (263-368)||(41680132-41680237)
chr8 (262-372)||(18816290-18816401)
chr8 (263-368)||(17978415-17978520)
chr8 (262-367)||(21514637-21514743)
chr8 (167-250)||(23478934-23479016)
chr8 (279-377)||(36405122-36405221)
chr8 (167-253)||(19880675-19880760)
chr8 (167-253)||(26454558-26454643)
chr8 (247-290)||(18834356-18834399)
chr8 (247-290)||(21399647-21399690)
chr8 (247-290)||(21794140-21794183)
chr8 (266-368)||(36732411-36732514)
chr8 (216-378)||(22708313-22708476)
chr8 (263-368)||(12577826-12577932)
chr8 (401-453)||(17611210-17611262)
chr8 (281-373)||(21676494-21676585)
chr8 (126-202)||(8413912-8413989)
chr8 (272-367)||(22258306-22258403)
chr8 (401-432)||(21676420-21676451)
chr8 (126-202)||(19882759-19882836)
chr8 (126-194)||(14397082-14397149)
chr8 (315-371)||(15202302-15202358)
chr8 (402-453)||(18834521-18834573)
chr8 (315-367)||(20463195-20463247)
chr8 (409-453)||(39834655-39834699)
[»] chr7 (70 HSPs)
chr7 (10-550)||(36300458-36300997)
chr7 (10-432)||(8930700-8931124)
chr7 (306-606)||(38299738-38300039)
chr7 (62-447)||(18570392-18570778)
chr7 (10-255)||(38295298-38295542)
chr7 (130-381)||(42565819-42566069)
chr7 (84-286)||(33556187-33556379)
chr7 (209-447)||(15700656-15700892)
chr7 (84-381)||(33060208-33060504)
chr7 (125-447)||(37539258-37539580)
chr7 (209-447)||(13744430-13744667)
chr7 (126-447)||(13315002-13315322)
chr7 (217-406)||(14160819-14161006)
chr7 (455-550)||(33555919-33556014)
chr7 (211-432)||(25943163-25943385)
chr7 (263-372)||(14318020-14318129)
chr7 (263-408)||(15119268-15119411)
chr7 (258-377)||(47095394-47095514)
chr7 (262-368)||(4690662-4690769)
chr7 (263-353)||(9743093-9743183)
chr7 (262-372)||(15575644-15575755)
chr7 (126-253)||(16550117-16550243)
chr7 (126-253)||(16615419-16615545)
chr7 (266-372)||(20252177-20252284)
chr7 (262-368)||(43745602-43745709)
chr7 (355-447)||(16463109-16463201)
chr7 (266-453)||(19195562-19195763)
chr7 (262-328)||(16186859-16186925)
chr7 (167-253)||(29052297-29052382)
chr7 (167-253)||(32160315-32160400)
chr7 (126-202)||(11303999-11304076)
chr7 (126-202)||(16108022-16108099)
chr7 (126-202)||(23664286-23664363)
chr7 (337-451)||(12127080-12127193)
chr7 (262-372)||(18874660-18874770)
chr7 (266-372)||(708424-708531)
chr7 (128-251)||(12754781-12754904)
chr7 (126-202)||(29797362-29797439)
chr7 (126-202)||(29801181-29801258)
chr7 (234-408)||(43276705-43276877)
chr7 (167-251)||(14274075-14274159)
chr7 (247-290)||(58489-58532)
chr7 (247-290)||(15720709-15720752)
chr7 (337-446)||(44374865-44374973)
chr7 (337-446)||(44383730-44383838)
chr7 (128-251)||(47975007-47975130)
chr7 (128-202)||(4325910-4325984)
chr7 (128-201)||(19195005-19195078)
chr7 (216-369)||(21661156-21661310)
chr7 (263-368)||(8513752-8513858)
chr7 (209-255)||(16250340-16250385)
chr7 (412-453)||(20620358-20620399)
chr7 (401-473)||(33060539-33060609)
chr7 (558-595)||(42565661-42565698)
chr7 (126-194)||(1856572-1856640)
chr7 (337-408)||(11067490-11067559)
chr7 (386-437)||(14156323-14156375)
chr7 (262-318)||(48212779-48212835)
chr7 (401-432)||(42565747-42565778)
chr7 (343-377)||(8135228-8135262)
chr7 (280-368)||(8488093-8488183)
chr7 (475-548)||(11799930-11800001)
chr7 (126-195)||(14188464-14188534)
chr7 (401-446)||(14318165-14318210)
chr7 (337-371)||(36704567-36704601)
chr7 (343-372)||(15624046-15624075)
chr7 (306-370)||(16250219-16250284)
chr7 (479-548)||(21508720-21508789)
chr7 (126-194)||(13917744-13917812)
chr7 (337-408)||(32433550-32433619)
[»] chr3 (61 HSPs)
chr3 (10-550)||(3526991-3527512)
chr3 (266-550)||(21845466-21845753)
chr3 (10-532)||(12917134-12917669)
chr3 (136-546)||(25201957-25202366)
chr3 (50-546)||(48043298-48043796)
chr3 (10-447)||(45803252-45803693)
chr3 (216-432)||(3160561-3160777)
chr3 (185-375)||(48631202-48631391)
chr3 (215-550)||(12150761-12151099)
chr3 (84-464)||(29907404-29907787)
chr3 (84-464)||(29948570-29948953)
chr3 (84-464)||(29997724-29998107)
chr3 (229-447)||(22841200-22841423)
chr3 (215-358)||(12155034-12155179)
chr3 (147-371)||(50350812-50351037)
chr3 (263-371)||(53646055-53646163)
chr3 (126-253)||(16979723-16979849)
chr3 (262-372)||(17208470-17208581)
chr3 (258-372)||(14520388-14520503)
chr3 (278-445)||(14641471-14641638)
chr3 (404-463)||(24548866-24548925)
chr3 (263-360)||(54330314-54330411)
chr3 (29-108)||(3160878-3160958)
chr3 (126-253)||(22652584-22652710)
chr3 (126-202)||(3803625-3803702)
chr3 (435-532)||(12154861-12154957)
chr3 (126-202)||(12305874-12305951)
chr3 (263-378)||(6003133-6003248)
chr3 (247-290)||(17684914-17684957)
chr3 (247-290)||(54875553-54875596)
chr3 (249-290)||(14442107-14442148)
chr3 (126-202)||(29544197-29544274)
chr3 (126-202)||(54521574-54521651)
chr3 (409-453)||(10380031-10380075)
chr3 (247-290)||(6156641-6156684)
chr3 (247-290)||(6159335-6159378)
chr3 (263-368)||(14152398-14152504)
chr3 (247-290)||(17669777-17669820)
chr3 (228-372)||(5215559-5215704)
chr3 (279-371)||(15566706-15566800)
chr3 (475-548)||(3262115-3262188)
chr3 (126-202)||(13437050-13437127)
chr3 (401-453)||(10558978-10559030)
chr3 (247-290)||(2841585-2841628)
chr3 (401-454)||(6159506-6159559)
chr3 (126-202)||(42339-42416)
chr3 (129-194)||(5224138-5224203)
chr3 (409-446)||(6468261-6468298)
chr3 (402-463)||(24547298-24547358)
chr3 (239-287)||(13522360-13522408)
chr3 (126-194)||(26054606-26054674)
chr3 (404-463)||(48631435-48631494)
chr3 (401-454)||(15566845-15566898)
chr3 (209-251)||(24177885-24177927)
chr3 (128-202)||(43549819-43549893)
chr3 (401-441)||(6820282-6820323)
chr3 (185-254)||(13522462-13522530)
chr3 (402-446)||(17518779-17518823)
chr3 (402-446)||(17533641-17533685)
chr3 (337-408)||(17541456-17541525)
chr3 (258-290)||(50755333-50755365)
[»] scaffold1939 (1 HSPs)
scaffold1939 (189-606)||(1-416)
[»] scaffold0031 (1 HSPs)
scaffold0031 (12-447)||(127263-127699)
[»] chr4 (47 HSPs)
chr4 (158-546)||(9622330-9622703)
chr4 (215-550)||(13165033-13165381)
chr4 (125-381)||(14477442-14477697)
chr4 (141-430)||(18462849-18463139)
chr4 (349-550)||(10273417-10273602)
chr4 (262-464)||(25513797-25514012)
chr4 (247-447)||(55583126-55583332)
chr4 (228-377)||(12623229-12623378)
chr4 (262-372)||(14631081-14631192)
chr4 (263-377)||(19565908-19566022)
chr4 (10-114)||(9622205-9622308)
chr4 (228-371)||(33243290-33243433)
chr4 (263-368)||(2424386-2424492)
chr4 (210-320)||(20150721-20150830)
chr4 (147-290)||(16296703-16296846)
chr4 (263-408)||(40230254-40230397)
chr4 (263-372)||(44023598-44023707)
chr4 (257-361)||(45314089-45314194)
chr4 (257-368)||(26921508-26921620)
chr4 (126-253)||(10694360-10694486)
chr4 (209-372)||(15239811-15239974)
chr4 (263-368)||(46741147-46741252)
chr4 (126-253)||(10908126-10908252)
chr4 (126-253)||(15008779-15008905)
chr4 (126-253)||(40620343-40620469)
chr4 (275-372)||(16296897-16296995)
chr4 (262-328)||(26446153-26446219)
chr4 (228-414)||(33186815-33187000)
chr4 (126-202)||(36038622-36038699)
chr4 (126-202)||(49547107-49547184)
chr4 (407-458)||(44928049-44928100)
chr4 (278-371)||(9638972-9639066)
chr4 (126-202)||(15534933-15535010)
chr4 (558-606)||(14477813-14477861)
chr4 (128-287)||(35660701-35660861)
chr4 (126-195)||(33849554-33849624)
chr4 (409-453)||(15191285-15191329)
chr4 (128-251)||(14549463-14549586)
chr4 (126-202)||(28386055-28386132)
chr4 (263-408)||(12424251-12424397)
chr4 (401-432)||(14477732-14477763)
chr4 (315-377)||(3515797-3515859)
chr4 (210-248)||(3838026-3838064)
chr4 (401-454)||(33243192-33243245)
chr4 (266-320)||(35660906-35660960)
chr4 (401-446)||(14186145-14186190)
chr4 (337-408)||(19022366-19022435)
[»] scaffold0139 (1 HSPs)
scaffold0139 (263-606)||(39900-40268)
[»] chr2 (41 HSPs)
chr2 (12-375)||(19646927-19647293)
chr2 (306-551)||(36734268-36734511)
chr2 (239-550)||(28344822-28345115)
chr2 (29-380)||(20005958-20006311)
chr2 (125-473)||(45535736-45536096)
chr2 (178-372)||(28652547-28652740)
chr2 (10-473)||(45528236-45528702)
chr2 (263-363)||(25584267-25584367)
chr2 (10-149)||(23800012-23800150)
chr2 (128-290)||(149583-149745)
chr2 (262-372)||(21335261-21335372)
chr2 (262-464)||(21369239-21369454)
chr2 (126-253)||(25184000-25184126)
chr2 (156-367)||(12626427-12626643)
chr2 (228-464)||(14179619-14179867)
chr2 (268-372)||(21315471-21315576)
chr2 (349-465)||(23801530-23801652)
chr2 (263-366)||(23968624-23968727)
chr2 (209-290)||(25584190-25584272)
chr2 (126-253)||(18358082-18358208)
chr2 (126-253)||(21915435-21915561)
chr2 (147-464)||(14183357-14183686)
chr2 (337-453)||(17307508-17307623)
chr2 (209-290)||(34491322-34491403)
chr2 (126-202)||(10684096-10684173)
chr2 (126-202)||(20261971-20262048)
chr2 (126-202)||(23338563-23338640)
chr2 (126-253)||(21081084-21081210)
chr2 (262-368)||(23610572-23610679)
chr2 (315-377)||(18388180-18388242)
chr2 (278-363)||(24717981-24718067)
chr2 (167-251)||(1383768-1383852)
chr2 (402-446)||(27852763-27852807)
chr2 (401-446)||(22695319-22695364)
chr2 (401-432)||(19647334-19647365)
chr2 (401-459)||(20005866-20005922)
chr2 (401-454)||(149399-149452)
chr2 (126-192)||(31345932-31345998)
chr2 (398-453)||(6576689-6576745)
chr2 (481-517)||(15266803-15266839)
chr2 (481-517)||(17811275-17811311)
[»] scaffold0035 (2 HSPs)
scaffold0035 (126-462)||(43692-44028)
scaffold0035 (126-462)||(39000-39336)
[»] scaffold0092 (1 HSPs)
scaffold0092 (75-427)||(38381-38734)
[»] scaffold0337 (1 HSPs)
scaffold0337 (217-427)||(3107-3317)
[»] scaffold0217 (2 HSPs)
scaffold0217 (101-375)||(28500-28773)
scaffold0217 (558-606)||(28895-28943)
[»] scaffold0086 (2 HSPs)
scaffold0086 (355-548)||(34998-35198)
scaffold0086 (147-201)||(35652-35706)
[»] scaffold0058 (2 HSPs)
scaffold0058 (16-432)||(59590-60006)
scaffold0058 (128-202)||(39976-40050)
[»] scaffold0021 (2 HSPs)
scaffold0021 (185-432)||(16977-17223)
scaffold0021 (185-432)||(26508-26754)
[»] scaffold0205 (2 HSPs)
scaffold0205 (38-465)||(5517-5945)
scaffold0205 (548-601)||(5439-5492)
[»] scaffold0394 (1 HSPs)
scaffold0394 (185-550)||(7327-7695)
[»] scaffold0004 (4 HSPs)
scaffold0004 (212-449)||(72982-73221)
scaffold0004 (209-431)||(75829-76054)
scaffold0004 (209-280)||(110217-110288)
scaffold0004 (306-439)||(66000-66134)
[»] scaffold0017 (4 HSPs)
scaffold0017 (266-431)||(23564-23730)
scaffold0017 (257-328)||(26668-26739)
scaffold0017 (431-462)||(26843-26874)
scaffold0017 (10-90)||(23380-23459)
[»] scaffold0165 (2 HSPs)
scaffold0165 (216-423)||(31831-32038)
scaffold0165 (306-367)||(32039-32100)
[»] scaffold0061 (2 HSPs)
scaffold0061 (126-427)||(14526-14828)
scaffold0061 (126-427)||(23584-23886)
[»] scaffold0048 (2 HSPs)
scaffold0048 (349-550)||(68560-68744)
scaffold0048 (217-368)||(56878-57026)
[»] scaffold1800 (2 HSPs)
scaffold1800 (216-372)||(509-664)
scaffold1800 (401-453)||(708-757)
[»] scaffold0369 (1 HSPs)
scaffold0369 (262-447)||(15537-15721)
[»] scaffold0125 (3 HSPs)
scaffold0125 (178-408)||(28415-28642)
scaffold0125 (337-373)||(7220-7256)
scaffold0125 (398-453)||(33612-33668)
[»] scaffold0878 (1 HSPs)
scaffold0878 (262-447)||(3343-3528)
[»] scaffold0148 (1 HSPs)
scaffold0148 (79-464)||(8604-8994)
[»] scaffold0247 (1 HSPs)
scaffold0247 (209-367)||(970-1128)
[»] scaffold0461 (1 HSPs)
scaffold0461 (208-290)||(12378-12460)
[»] scaffold0059 (1 HSPs)
scaffold0059 (241-377)||(49656-49791)
[»] scaffold1102 (2 HSPs)
scaffold1102 (267-381)||(1937-2051)
scaffold1102 (401-473)||(1832-1902)
[»] scaffold0630 (1 HSPs)
scaffold0630 (263-372)||(9011-9120)
[»] scaffold0505 (1 HSPs)
scaffold0505 (208-454)||(4829-5075)
[»] scaffold0011 (1 HSPs)
scaffold0011 (228-377)||(33367-33516)
[»] scaffold0063 (1 HSPs)
scaffold0063 (228-372)||(62631-62775)
[»] scaffold1186 (1 HSPs)
scaffold1186 (262-372)||(1966-2077)
[»] scaffold0005 (1 HSPs)
scaffold0005 (262-372)||(186191-186302)
[»] scaffold0213 (2 HSPs)
scaffold0213 (263-464)||(19154-19368)
scaffold0213 (270-315)||(19115-19160)
[»] scaffold0371 (2 HSPs)
scaffold0371 (228-368)||(10445-10585)
scaffold0371 (293-368)||(3853-3927)
[»] scaffold0439 (3 HSPs)
scaffold0439 (263-368)||(4369-4474)
scaffold0439 (177-254)||(12103-12179)
scaffold0439 (242-290)||(12236-12284)
[»] scaffold0385 (1 HSPs)
scaffold0385 (263-368)||(293-398)
[»] scaffold0020 (1 HSPs)
scaffold0020 (263-368)||(174169-174274)
[»] scaffold0174 (2 HSPs)
scaffold0174 (210-464)||(19750-20004)
scaffold0174 (307-464)||(5445-5602)
[»] scaffold0120 (1 HSPs)
scaffold0120 (210-320)||(29207-29316)
[»] scaffold0730 (1 HSPs)
scaffold0730 (70-446)||(6426-6802)
[»] scaffold0138 (2 HSPs)
scaffold0138 (126-253)||(20908-21034)
scaffold0138 (167-253)||(33964-34049)
[»] scaffold0034 (1 HSPs)
scaffold0034 (126-253)||(29331-29457)
[»] scaffold0401 (1 HSPs)
scaffold0401 (263-368)||(8769-8874)
[»] scaffold0203 (1 HSPs)
scaffold0203 (262-371)||(17936-18046)
[»] scaffold0039 (1 HSPs)
scaffold0039 (263-368)||(9927-10032)
[»] scaffold0007 (4 HSPs)
scaffold0007 (228-377)||(16409-16561)
scaffold0007 (228-338)||(18887-18999)
scaffold0007 (228-340)||(16602-16715)
scaffold0007 (228-377)||(18691-18844)
[»] scaffold0676 (3 HSPs)
scaffold0676 (128-287)||(2627-2786)
scaffold0676 (266-371)||(2831-2937)
scaffold0676 (401-454)||(2982-3035)
[»] scaffold0555 (2 HSPs)
scaffold0555 (156-251)||(8913-9008)
scaffold0555 (261-290)||(8825-8854)
[»] scaffold0083 (1 HSPs)
scaffold0083 (126-253)||(1748-1874)
[»] scaffold0046 (1 HSPs)
scaffold0046 (147-250)||(21895-21997)
[»] scaffold0436 (1 HSPs)
scaffold0436 (167-253)||(8812-8897)
[»] scaffold0379 (2 HSPs)
scaffold0379 (209-290)||(10841-10921)
scaffold0379 (402-464)||(11046-11108)
[»] scaffold0261 (1 HSPs)
scaffold0261 (268-368)||(6419-6519)
[»] scaffold0113 (1 HSPs)
scaffold0113 (128-253)||(35305-35430)
[»] scaffold0162 (1 HSPs)
scaffold0162 (262-318)||(23932-23988)
[»] scaffold0231 (2 HSPs)
scaffold0231 (262-372)||(17516-17627)
scaffold0231 (409-446)||(23710-23747)
[»] scaffold0056 (1 HSPs)
scaffold0056 (262-368)||(18221-18328)
[»] scaffold0026 (1 HSPs)
scaffold0026 (128-251)||(21935-22058)
[»] scaffold0516 (3 HSPs)
scaffold0516 (262-368)||(5304-5411)
scaffold0516 (402-463)||(5101-5162)
scaffold0516 (402-431)||(5230-5259)
[»] scaffold0462 (3 HSPs)
scaffold0462 (126-253)||(11034-11160)
scaffold0462 (263-312)||(1264-1313)
scaffold0462 (263-312)||(6770-6819)
[»] scaffold0057 (1 HSPs)
scaffold0057 (126-253)||(69968-70094)
[»] scaffold1256 (2 HSPs)
scaffold1256 (402-463)||(2093-2154)
scaffold1256 (281-368)||(2199-2287)
[»] scaffold0853 (1 HSPs)
scaffold0853 (262-367)||(2454-2562)
[»] scaffold0098 (1 HSPs)
scaffold0098 (247-290)||(40037-40080)
[»] scaffold0515 (1 HSPs)
scaffold0515 (126-253)||(4847-4966)
[»] scaffold0453 (1 HSPs)
scaffold0453 (126-194)||(7182-7251)
[»] scaffold0306 (1 HSPs)
scaffold0306 (126-253)||(4847-4966)
[»] scaffold0108 (1 HSPs)
scaffold0108 (228-377)||(6329-6480)
[»] scaffold0032 (1 HSPs)
scaffold0032 (275-371)||(61844-61940)
[»] scaffold0116 (1 HSPs)
scaffold0116 (406-458)||(46003-46055)
[»] scaffold0111 (2 HSPs)
scaffold0111 (398-453)||(5470-5526)
scaffold0111 (401-446)||(12439-12484)
[»] scaffold1434 (1 HSPs)
scaffold1434 (312-378)||(1348-1414)
[»] scaffold0422 (1 HSPs)
scaffold0422 (129-202)||(3778-3852)
[»] scaffold0230 (1 HSPs)
scaffold0230 (185-251)||(6910-6976)
[»] scaffold0220 (2 HSPs)
scaffold0220 (278-371)||(13911-14005)
scaffold0220 (402-453)||(14032-14084)
[»] scaffold0546 (1 HSPs)
scaffold0546 (401-446)||(8018-8063)
[»] scaffold0488 (1 HSPs)
scaffold0488 (404-453)||(12581-12630)
[»] scaffold0109 (1 HSPs)
scaffold0109 (401-446)||(5244-5289)
[»] scaffold0001 (3 HSPs)
scaffold0001 (126-202)||(169251-169328)
scaffold0001 (126-202)||(176604-176681)
scaffold0001 (337-408)||(77709-77778)
[»] scaffold0200 (1 HSPs)
scaffold0200 (126-194)||(18406-18474)
[»] scaffold0145 (1 HSPs)
scaffold0145 (277-320)||(8085-8129)
[»] scaffold0121 (1 HSPs)
scaffold0121 (228-315)||(20112-20199)
[»] scaffold0431 (1 HSPs)
scaffold0431 (263-408)||(5578-5724)
[»] scaffold0019 (1 HSPs)
scaffold0019 (480-535)||(183105-183160)
[»] scaffold1276 (1 HSPs)
scaffold1276 (128-202)||(954-1028)
[»] scaffold0594 (2 HSPs)
scaffold0594 (177-255)||(2102-2180)
scaffold0594 (306-374)||(2237-2306)
[»] scaffold0151 (1 HSPs)
scaffold0151 (128-202)||(9909-9983)
[»] scaffold0094 (1 HSPs)
scaffold0094 (475-541)||(48410-48476)
[»] scaffold0716 (1 HSPs)
scaffold0716 (412-453)||(5590-5631)
[»] scaffold0088 (1 HSPs)
scaffold0088 (475-520)||(35381-35426)
[»] scaffold0285 (1 HSPs)
scaffold0285 (337-377)||(19775-19815)
[»] scaffold0146 (1 HSPs)
scaffold0146 (402-446)||(23067-23111)


Alignment Details
Target: chr6 (Bit Score: 581; Significance: 0; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 581; E-Value: 0
Query Start/End: Original strand, 10 - 606
Target Start/End: Original strand, 1818648 - 1819243
Alignment:
Q  10 gcgagtagaacactcaccngttgcgagttgatatcgaagtcactcgcaaggcgaacaagatcacccgccgtggtgagcgatgacaaacagttctacggga 109  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  1818648 gcgagtagaacactcacc-gttgcgagttgatatcgaagtcactcgcaaggcgaacaagatcactcgccgtggtgagcgatgacaaacagttctacggga 1818746  T
Q  110 agaaatctattttttcccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattc 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1818747 agaaatctattttttcccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattc 1818846  T
Q  210 cttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactattaacaactacaagcttaa 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1818847 cttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactattaacaactacaagcttaa 1818946  T
Q  310 accctttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctct 409  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1818947 accctttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctct 1819046  T
Q  410 tctctgacttctcactttctccccttttctcccaaaaacagtttctacgtattctgactttctaatttgttgtaaccctaattctctaatggtctcatct 509  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1819047 tctctgacttctcactttctccccttttctcccaaaaacagtttctacgtattctgactttctaatttgttgtaaccctaattctctaatggtctcatct 1819146  T
Q  510 atttataatcactatctgagtttgtttttcacttaatctctttgattataaacctacataatcttccttattccaattctacccttatgcctaatta 606  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1819147 atttataatcactatctgagtttgtttttcacttaatctctttgattataaacctacataatcttccttattccaattctacccttatgcctcatta 1819243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 10 - 409
Target Start/End: Original strand, 10445913 - 10446311
Alignment:
Q  10 gcgagtagaacactcaccngttgcgagttgatatcgaagtcactcgcaaggcgaacaagatcacccgccgtggtgagcgatgacaaacagttctacggga 109  Q
    ||||||| ||||||| || |||||||||||| |||||||||||||||     |||  ||||||| ||| |||| |||| |||||| | |||| |||||||    
T  10445913 gcgagtaaaacactcgcc-gttgcgagttgacatcgaagtcactcgc-----gaaagagatcactcgctgtggcgagctatgacagatagttttacggga 10446006  T
Q  110 agaaatctattttttcccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattc 209  Q
    |||||  | ||||   ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  10446007 agaaacatgttttcagccaaaaacccaattttcaaccacccaaatcccaaattcaaaaggaaactcaacctatgtttattctataatctgaacctcattc 10446106  T
Q  210 cttacgttaattcaatgaattacctac---tctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaacta--ttaacaactacaag 304  Q
    |||||||||||||||||  ||||||||   ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||    |||||| ||| |    
T  10446107 cttacgttaattcaatgctttacctactgatctttcaacaatcaattttgcaaattaaccctaatttctataacatcgaaactaacaaaacaacaacatg 10446206  T
Q  305 cttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctc 403  Q
     |||||||| |||| ||||  |||  || ||| |||| |||| | ||||| ||||||||||||||||| | ||| ||||||||||| | |||||||||||    
T  10446207 -ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagattagatgatttcagactctacatgcttgctcctc 10446305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 307 - 550
Target Start/End: Original strand, 13285739 - 13285967
Alignment:
Q  307 taaaccctttttcagaactat-atactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctctt 405  Q
    ||||||| ||||||||| ||| | ||||||||||| |||||||||||| ||||||||||||||||| | ||  ||||||||||| |||||||||||||||    
T  13285739 taaaccccttttcagaattatgaaactcatgattatagaaggttagtcccacccttaccttagattagatggtttcagactctacaagcttgctcctctt 13285838  T
Q  406 ctc-ttctctgacttctcactttctccccttttctcccaaaaacagtttctacgtattctgactttctaatttgttgtaaccctaattctctaatggtct 504  Q
    ||| |||||||||||||||||||||||| ||||||||| ||| |||                 |||||||||||||||||||||||||||||||||||||    
T  13285839 ctctttctctgacttctcactttctccctttttctcccgaaagcag-----------------tttctaatttgttgtaaccctaattctctaatggtct 13285921  T
Q  505 catctatttataatcactatctgagtttgtttttcacttaatctct 550  Q
    ||||||||||||||||| | |||||||||||| | |||||||||||    
T  13285922 catctatttataatcaccaactgagtttgtttctaacttaatctct 13285967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 185 - 375
Target Start/End: Original strand, 18459176 - 18459366
Alignment:
Q  185 ttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatca 284  Q
    ||||||||||| ||||||  || |  ||| ||||||||| || ||| ||||| |||||||||||||| ||| ||||| || ||||| |||||||||||||    
T  18459176 ttattctacaacctgaacaacagtttttatgttaattcattggatttcctacactttcaacaatcaaattt-caattaaaacctaacttctataacatca 18459274  T
Q  285 aaactattaacaactacaagcttaaacccttttt-cagaactatatactcatgattaaagaaggttagtctcacccttaccttagattggtt 375  Q
    ||||| |||| ||||| ||  ||||||||||||| |||||  |||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  18459275 aaactgttaaaaactataaaattaaacccttttttcagaatcatatactcatgattaaagtaggttagtcccacccttaccttagattggtt 18459366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 219 - 447
Target Start/End: Original strand, 35057448 - 35057676
Alignment:
Q  219 attcaatgaattacctactctttcaacaatcaattttgcaatttaac-cctaatttctataacatcaaaactattaacaactacaagcttaaaccctttt 317  Q
    ||||| || ||||||||| |||||||||||||| || | |||| ||  |||||||||  |||||||| || | | |||||| ||||   ||||||| |||    
T  35057448 attcattggattacctacactttcaacaatcaaatt-gaaattcaaaacctaatttcattaacatcataatt-tcaacaacaacaatggtaaaccccttt 35057545  T
Q  318 tcagaactat-atactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctcttctctga 416  Q
    |||||| ||| | ||| ||||||| ||||| |||||| |||| ||||||||||||| |||||||  ||||||| ||| ||||||||||||||||||||||    
T  35057546 tcagaattatgaaacttatgattatagaagattagtcccaccattaccttagattgattgaatttggactctacaagtttgctcctcttctcttctctga 35057645  T
Q  417 cttctcactttctccccttttctcccaaaaa 447  Q
    |||||||||||||||| ||||||||||||||    
T  35057646 cttctcactttctccctttttctcccaaaaa 35057676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 178 - 448
Target Start/End: Original strand, 25921864 - 25922133
Alignment:
Q  178 cctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaattttgcaattt-aaccctaatttcta 276  Q
    |||||| ||||||||||| ||||||  || || |||| ||||||||    ||||  ||||||||| ||||||||||||  | ||| || ||| | |||||    
T  25921864 cctatgattattctacaacctgaacaccaatcattaccttaattcatcagattatttactctttctacaatcaatttt--agtttcaaaccttaattcta 25921961  T
Q  277 taacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagattggtt 375  Q
     ||||||||||| |||||||||||||||| ||||||||||||| || | || ||||| ||||||||| |||||||||| ||||||||||||||||| | |    
T  25921962 caacatcaaaacctattaacaactacaaggttaaacccttttttaggattacatacttatgattaaataaggttagtcccacccttaccttagattagat 25922061  T
Q  376 gaattcagactctataagcttgctcctcttctc-ttctctgacttctcactttctccccttttctcccaaaaac 448  Q
    ||  || | |||||  || |||||||||||||| |||||||||||||||||||   || |||||||||||||||    
T  25922062 ga--tcggtctctacgagattgctcctcttctctttctctgacttctcacttttctccattttctcccaaaaac 25922133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 263 - 368
Target Start/End: Complemental strand, 7217347 - 7217243
Alignment:
Q  263 aaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcaccctta 362  Q
    |||||||||| ||| ||||||||| ||||||||||||||||| |||||||||||||||| | || ||||| |||||||||||||||||||||||||||||    
T  7217347 aaccctaatt-ctacaacatcaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtctcaccctta 7217249  T
Q  363 ccttag 368  Q
    ||||||    
T  7217248 ccttag 7217243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 278 - 453
Target Start/End: Complemental strand, 19825576 - 19825401
Alignment:
Q  278 aacatcaaaactattaacaactacaagcttaaaccctttttcagaactatata-ctcatgattaaagaaggttagtctcacccttaccttagattggttg 376  Q
    |||||||||||||  |||||||||||| ||||| |||||||||||| |||  | | ||| |||| |||| | ||||||||||||||||||||||| | ||    
T  19825576 aacatcaaaactaacaacaactacaaggttaaaacctttttcagaattatgcaacccattattagagaaagctagtctcacccttaccttagattagatg 19825477  T
Q  377 aattcagactctataagcttgctcctcttctctt-ctctgacttctcactttctccccttttctcccaaaaacagttt 453  Q
    |  || | |||||  || |||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||    
T  19825476 a--tcggtctctacgagattgctcctcttctctttctctgacttctcactttctccctttttctcccaaaagcagttt 19825401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 178 - 372
Target Start/End: Complemental strand, 25601515 - 25601325
Alignment:
Q  178 cctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctat 277  Q
    |||||| ||||| |||||  ||||| ||| |  |||| |||||||  || |||||||||||||| |||||| || ||  |||| ||||||||||||||||    
T  25601515 cctatgattattatacaacatgaacatcaattattaccttaattctttggattacctactcttttaacaattaaatt--caatctaaccctaatttctat 25601418  T
Q  278 aacatcaaaactattaacaactacaa-gcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagattg 372  Q
    ||||| |||||||   |||||||||| | |||||||||||||||||| || || || |||||||| ||||||||||||| ||||||||||||||||    
T  25601417 aacatgaaaacta---acaactacaaaggttaaaccctttttcagaattacattcttatgattaatgaaggttagtctctcccttaccttagattg 25601325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 263 - 368
Target Start/End: Original strand, 31734655 - 31734760
Alignment:
Q  263 aaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcaccctt 361  Q
    ||||||||||| || ||||||||||| ||||||||||| |||| |||||||||||||||||| || ||||| |||||||||||||||||||| |||||||    
T  31734655 aaccctaattt-tacaacatcaaaacctattaacaactgcaaggttaaaccctttttcagaattacatacttatgattaaagaaggttagtcccaccctt 31734753  T
Q  362 accttag 368  Q
    |||||||    
T  31734754 accttag 31734760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 268 - 432
Target Start/End: Complemental strand, 34140554 - 34140390
Alignment:
Q  268 taatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttacctta 367  Q
    ||||| |||||||||||||||||  |||||||||||| |||||||   ||||| || |||| || ||| |||| ||||| | |||| |||||||||||||    
T  34140554 taattcctataacatcaaaactaacaacaactacaagattaaaccagatttcaaaattataaacccattattagagaagct-agtcccacccttacctta 34140456  T
Q  368 gattggttgaattcagactctataagcttgctcctcttct-cttctctgacttctcactttctccc 432  Q
    |||| | ||| | || |||||| ||||||||||||||||| ||||||| |||||||||||||||||    
T  34140455 gattagatgattacaaactctacaagcttgctcctcttctccttctctaacttctcactttctccc 34140390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 228 - 371
Target Start/End: Complemental strand, 23431586 - 23431443
Alignment:
Q  228 attacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaacta 326  Q
    |||| |||||||||| ||||||||||||    |  |||||||||| ||| ||||||||||| ||||| |||||||||| |||||||||||||||| | ||    
T  23431586 attatctactctttctacaatcaattttagtttcaaaccctaatt-ctacaacatcaaaacctattagcaactacaaggttaaaccctttttcaggatta 23431488  T
Q  327 tatactcatgattaaagaaggttagtctcacccttaccttagatt 371  Q
     ||||| |||||||||||||||||||| ||| |||||||||||||    
T  23431487 catacttatgattaaagaaggttagtcccacgcttaccttagatt 23431443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 263 - 378
Target Start/End: Original strand, 31166188 - 31166303
Alignment:
Q  263 aaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcaccctta 362  Q
    ||||| || |||| |||||||| || ||| |||||| | ||  |||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||    
T  31166188 aaccccaacttctttaacatcacaattatcaacaacaataaaattaaaccctttttcagaattatagactcatgattaaagatggttagtctcaccctta 31166287  T
Q  363 ccttagattggttgaa 378  Q
    ||||||||||| ||||    
T  31166288 ccttagattggatgaa 31166303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 217 - 330
Target Start/End: Complemental strand, 24506265 - 24506153
Alignment:
Q  217 taattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactattaacaactacaagcttaaacccttt 316  Q
    ||||||| || ||||||||| ||||||||||| || ||  |||||||| ||||| |||||||||||||||||||| |||||||||||  |||||||||||    
T  24506265 taattcattggattacctacactttcaacaattaaatta-caatttaaacctaacttctataacatcaaaactatcaacaactacaaaattaaacccttt 24506167  T
Q  317 ttcagaactatata 330  Q
    ||||||| ||||||    
T  24506166 ttcagaattatata 24506153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 268 - 432
Target Start/End: Complemental strand, 34153170 - 34153006
Alignment:
Q  268 taatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttacctta 367  Q
    ||||| |||||||||||||||||  |||||||||||| ||||| |   ||||| || |||| || ||| |||| ||||| | |||| |||||||||||||    
T  34153170 taattcctataacatcaaaactaacaacaactacaagattaaaacagatttcaaaattataaacccattattagagaagct-agtcccacccttacctta 34153072  T
Q  368 gattggttgaattcagactctataagcttgctcctcttct-cttctctgacttctcactttctccc 432  Q
    |||| | ||| | || |||||| ||||||||||||||||| ||||||| |||||||||||||||||    
T  34153071 gattagatgattacaaactctacaagcttgctcctcttctccttctctaacttctcactttctccc 34153006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 262 - 368
Target Start/End: Original strand, 15998835 - 15998942
Alignment:
Q  262 taaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcaccct 360  Q
    |||||||||||||||||||||||||||||  |||||||||||| |||||| ||||||||||| ||||  ||| |  |||| |||| ||||||||||||||    
T  15998835 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaactctttttcagaattatacaacttagaattagagaaagttagtctcaccct 15998934  T
Q  361 taccttag 368  Q
    ||||||||    
T  15998935 taccttag 15998942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 263 - 372
Target Start/End: Original strand, 32259793 - 32259902
Alignment:
Q  263 aaccctaatttctataacatcaaaact-attaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcaccctt 361  Q
    |||||||||| ||| |||||||||||| ||||| ||||||||| |||||| ||||||||| | || ||||| |||||||||||||||||||| |||||||    
T  32259793 aaccctaatt-ctacaacatcaaaacttattaaaaactacaaggttaaactctttttcaggattacatacttatgattaaagaaggttagtcacaccctt 32259891  T
Q  362 accttagattg 372  Q
    |||| ||||||    
T  32259892 acctaagattg 32259902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 228 - 340
Target Start/End: Original strand, 18982325 - 18982439
Alignment:
Q  228 attacctactctttcaacaatcaattttgcaatttaa---ccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaac 324  Q
    ||||||||| |||||||||||||| || |||||||||   |||||| ||||| | |||||||||||| |||||||||||  |||||||||||||||||||    
T  18982325 attacctacgctttcaacaatcaaatt-gcaatttaaaaaccctaacttctacagcatcaaaactatcaacaactacaaaattaaaccctttttcagaac 18982423  T
Q  325 tatatactcatgatta 340  Q
     ||||||| |||||||    
T  18982424 catatacttatgatta 18982439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 126 - 253
Target Start/End: Complemental strand, 15891810 - 15891684
Alignment:
Q  126 ccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaat 225  Q
    |||||| ||| | ||||| | |||||||| |||||||  | ||||||||||||||||||||||| ||||  |||||| ||| | |||| ||||||||| |    
T  15891810 ccaaaagccccaatttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattttacagcctgaacttcaattcttatgttaattcatt 15891711  T
Q  226 gaattacctactctttcaacaatcaatt 253  Q
    |||||||||||||||| |||||||||||    
T  15891710 gaattacctactcttt-aacaatcaatt 15891684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 126 - 253
Target Start/End: Complemental strand, 15900895 - 15900769
Alignment:
Q  126 ccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaat 225  Q
    |||||| ||| | ||||| | |||||||| |||||||  | ||||||||||||||||||||||| ||||  |||||| ||| | |||| ||||||||| |    
T  15900895 ccaaaagccccaatttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattttacagcctgaacttcaattcttatgttaattcatt 15900796  T
Q  226 gaattacctactctttcaacaatcaatt 253  Q
    |||||||||||||||| |||||||||||    
T  15900795 gaattacctactcttt-aacaatcaatt 15900769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 306 - 447
Target Start/End: Original strand, 29045261 - 29045402
Alignment:
Q  306 ttaaaccctttttcagaactatata-ctcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctct 404  Q
    ||||||||||||||| || |||| | | ||| |||| |||| | ||||||||||||||||||||| | | ||| | |  |||||| ||||||||||||||    
T  29045261 ttaaaccctttttcaaaattatacaacccattattagagaaagctagtctcacccttaccttagaatagatgattccgaactcta-aagcttgctcctct 29045359  T
Q  405 tctct-tctctgacttctcactttctccccttttctcccaaaaa 447  Q
    ||||| |||||||||||||||||||| |||||||||||||||||    
T  29045360 tctctctctctgacttctcactttct-cccttttctcccaaaaa 29045402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 263 - 368
Target Start/End: Complemental strand, 18455177 - 18455072
Alignment:
Q  263 aaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcaccctt 361  Q
    |||||||||| ||| || |||||||| |||||||||||||||| ||||| |||||||||| | || ||||| ||||||||||||||||| || |||||||    
T  18455177 aaccctaatt-ctacaatatcaaaacctattaacaactacaaggttaaaacctttttcaggattacatacttatgattaaagaaggttactcccaccctt 18455079  T
Q  362 accttag 368  Q
    |||||||    
T  18455078 accttag 18455072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 272 - 368
Target Start/End: Original strand, 22557204 - 22557300
Alignment:
Q  272 ttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttag 368  Q
    ||||| ||||||||||| |||||||||||||||| |||||||||||||||| | || ||||| |||| |||||||||||| || ||||||||||||||    
T  22557204 ttctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatga-taaagaaggttactcccacccttaccttag 22557300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 48 - 162
Target Start/End: Original strand, 14993540 - 14993654
Alignment:
Q  48 gtcactcgcaaggcgaacaagatcacccgccgtggtgagcgatgacaaacagttctacgggaagaaatctattttttcccaaaaacccaattttcaacca 147  Q
    ||||||||| |||||||||||| ||| ||||||||  |||||||| | |||  |||||||||||||| || ||||  ||||||||||| | ||||||| |    
T  14993540 gtcactcgcgaggcgaacaagaacactcgccgtggcaagcgatgatagacaaatctacgggaagaaacctgttttcacccaaaaaccccaatttcaacta 14993639  T
Q  148 cccaaattccaaatt 162  Q
    ||||||| |||||||    
T  14993640 cccaaatcccaaatt 14993654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 488 - 550
Target Start/End: Original strand, 14993677 - 14993739
Alignment:
Q  488 taattctctaatggtctcatctatttataatcactatctgagtttgtttttcacttaatctct 550  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||| | |||||||||||    
T  14993677 taattctctaatggcctcatctatttataatcactaactgagtttgtttcttacttaatctct 14993739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 28288747 - 28288670
Alignment:
Q  126 ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 202  Q
    |||||||||||||||| || |||||||||  |||||||  | ||||||||||||||||||||||||||||||||||||    
T  28288747 ccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaac 28288670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 149 - 253
Target Start/End: Complemental strand, 15173671 - 15173568
Alignment:
Q  149 ccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaat 248  Q
    |||||| |||||||  | |||||||||||||||||||||| |||||  |||||| ||| | |||| ||||||||| ||||||||||| ||||| ||||||    
T  15173671 ccaaatcccaaatttgataggaaactcaacctatgtttatcctacaggctgaacttcaattcttatgttaattcattgaattacctattcttt-aacaat 15173573  T
Q  249 caatt 253  Q
    |||||    
T  15173572 caatt 15173568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 228 - 377
Target Start/End: Original strand, 18982483 - 18982634
Alignment:
Q  228 attacctactctttcaacaa-tcaattttgcaatt-taaccctaatttctataa-catcaaaactattaacaactacaagcttaaaccctttttcagaac 324  Q
    |||||||||||||||| ||| ||||||||  |||| |||||||||||||| ||| ||||||| |||  |||||||||||| ||||||||||||||||||     
T  18982483 attacctactctttcaccaaatcaatttt--aattctaaccctaatttctctaatcatcaaacctagcaacaactacaaggttaaaccctttttcagaat 18982580  T
Q  325 tata-tactcatgattaaagaaggttagtctcacccttaccttagattggttga 377  Q
    ||||  || ||| |||| | || |||| || |||| ||||||||||||| ||||    
T  18982581 tatacaacccattattagataaagttaatcccaccgttaccttagattgattga 18982634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 12942941 - 12943018
Alignment:
Q  126 ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 202  Q
    |||||||||||||||| || |||||||||  |||||||  | |||||||||||||||| |||||||||||||||||||    
T  12942941 ccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatatttattctacaatctgaac 12943018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 20410616 - 20410552
Alignment:
Q  262 taaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata 328  Q
    ||||||||||||||||  ||||||||||| ||||||||||||| ||||| |||||||||||| ||||    
T  20410616 taaccctaatttctat--catcaaaactaataacaactacaaggttaaatcctttttcagaattata 20410552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 271 - 368
Target Start/End: Complemental strand, 21683171 - 21683074
Alignment:
Q  271 tttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcacccttaccttag 368  Q
    ||||||||||||||||||||  |||||||||||| |||||||||||||| ||| ||||  || ||| |||| |||| | ||||| ||||||||||||||    
T  21683171 tttctataacatcaaaactac-aacaactacaaggttaaaccctttttctgaattatacaacccattattagagaaagctagtcccacccttaccttag 21683074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 23658044 - 23658101
Alignment:
Q  272 ttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactata 328  Q
    ||||| ||||||||||| |||||||||||||||| |||||||||||||||||| ||||    
T  23658044 ttctacaacatcaaaacctattaacaactacaaggttaaaccctttttcagaattata 23658101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 170 - 255
Target Start/End: Original strand, 29045119 - 29045204
Alignment:
Q  170 aaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaatttt 255  Q
    |||||| ||||||| ||||||||||| |||||| ||| |  |||| ||| ||||  | ||||||||||||||||||||||||||||    
T  29045119 aaactctacctatgattattctacaacctgaacatcaattattaccttagttcatcggattacctactctttcaacaatcaatttt 29045204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 401 - 473
Target Start/End: Original strand, 31166343 - 31166413
Alignment:
Q  401 ctcttctcttctctgacttctcactttctccccttttctcccaaaaacagtttctacgtattctgactttcta 473  Q
    |||||||||| ||||||||||||||||||  | ||||||||||||||| |||| ||||| |||||||| ||||    
T  31166343 ctcttctcttatctgacttctcactttct--ctttttctcccaaaaactgtttttacgtgttctgactctcta 31166413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 18455031 - 18454978
Alignment:
Q  401 ctcttctcttctct-gacttctcactttctccccttttctcccaaaaacagtttc 454  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||| |||||||    
T  18455031 ctcttctcttctcttgacttctcactttctccc-ttttctcccaaaagcagtttc 18454978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 18585549 - 18585615
Alignment:
Q  185 ttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaa 251  Q
    ||||||||||| |||||| ||| | |||| ||||||||| |||||||| ||| ||||||||||||||    
T  18585549 ttattctacaacctgaacatcaattcttatgttaattcattgaattacatacactttcaacaatcaa 18585615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 23956674 - 23956751
Alignment:
Q  126 ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 202  Q
    |||||||||||||||| || |||||||||  |||||||  | |||||||| |||||||| ||||||||||| ||||||    
T  23956674 ccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaac 23956751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 194
Target Start/End: Original strand, 23415717 - 23415785
Alignment:
Q  126 ccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctaca 194  Q
    |||||| ||| | ||||| | |||||||| |||||||  | ||||||||||||||||||||||||||||    
T  23415717 ccaaaagccccaatttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctaca 23415785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 315 - 377
Target Start/End: Complemental strand, 31629913 - 31629851
Alignment:
Q  315 ttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagattggttga 377  Q
    |||||||||  ||| ||||| |||||  ||| |||||||||||||||||||||||||| ||||    
T  31629913 ttttcagaatcatagactcaagattattgaatgttagtctcacccttaccttagattgattga 31629851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 13765158 - 13765235
Alignment:
Q  126 ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 202  Q
    ||||||||| |||||| || |||||||||  |||||||  | |||||||| |||||||| ||||||||||| ||||||    
T  13765158 ccaaaaacctaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaac 13765235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 520
Target Start/End: Complemental strand, 15285882 - 15285837
Alignment:
Q  475 tttgttgtaaccctaattctctaatggtctcatctatttataatca 520  Q
    ||||||||||||||| ||  |||||| |||||||||||||||||||    
T  15285882 tttgttgtaaccctattttcctaatgttctcatctatttataatca 15285837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 372
Target Start/End: Original strand, 23501700 - 23501729
Alignment:
Q  343 gaaggttagtctcacccttaccttagattg 372  Q
    ||||||||||||||||||||||||||||||    
T  23501700 gaaggttagtctcacccttaccttagattg 23501729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 417 - 453
Target Start/End: Original strand, 23658188 - 23658224
Alignment:
Q  417 cttctcactttctccccttttctcccaaaaacagttt 453  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  23658188 cttctcactttctccctttttctcccaaaagcagttt 23658224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 170 - 202
Target Start/End: Original strand, 27557519 - 27557551
Alignment:
Q  170 aaactcaacctatgtttattctacaatctgaac 202  Q
    |||||||||||||||||||||||||| ||||||    
T  27557519 aaactcaacctatgtttattctacaacctgaac 27557551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 337 - 377
Target Start/End: Original strand, 28948597 - 28948637
Alignment:
Q  337 attaaagaaggttagtctcacccttaccttagattggttga 377  Q
    |||| |||| |||||||||||||||||||||||||| ||||    
T  28948597 attagagaaagttagtctcacccttaccttagattgattga 28948637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 320; Significance: 1e-180; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 10 - 548
Target Start/End: Original strand, 21503835 - 21504365
Alignment:
Q  10 gcgagtagaacactcaccngttgcgagttgatatcgaagtcactcgcaaggcgaacaagatcacccgccgtggtgagcgatgacaaacagttctacggga 109  Q
    ||||||||||||||| || |||||||||||| ||||||||||||||| |||||||||||||||| | ||||||  |||||||||| ||||||||||| ||    
T  21503835 gcgagtagaacactcgcc-gttgcgagttgacatcgaagtcactcgcgaggcgaacaagatcactcaccgtggctagcgatgacagacagttctacgaga 21503933  T
Q  110 agaaatctattttttcccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattc 209  Q
    | ||| |||||||   ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||| |||||| ||| |     
T  21503934 aaaaacctattttcagccaaaaacccaattttcaaccacccaaatcccaaattcaataggaaactcaacctatgattattctacaacctgaacatcagtt 21504033  T
Q  210 cttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactattaacaactacaagcttaa 309  Q
    |||| ||||||||| || || |||||||||||||||||| |||||   ||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  21504034 cttatgttaattcattggatcacctactctttcaacaatgaatttgcaaatttaaccctaatttctataacatcaaaactactaacaactacaaacttaa 21504133  T
Q  310 accctttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctct 409  Q
    ||||||||||||||| ||||||| |||||||||||||||||||| |||| |||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  21504134 accctttttcagaaccatatacttatgattaaagaaggttagtcccacctttaccttagattggttgaattcggactctacaagcttgctcctcttctct 21504233  T
Q  410 tctctgacttctcactttctccccttttctcccaaaaacagtttctacgtattctgactttctaatttgttgtaaccctaattctctaatggtctcatct 509  Q
    ||||| ||||||||||||||||||||||||||| ||| |||||||||||| |||      |||| |||||||||||||||||||||||| ||||||||||    
T  21504234 tctcttacttctcactttctccccttttctccc-aaagcagtttctacgtgttc------tctattttgttgtaaccctaattctctaacggtctcatct 21504326  T
Q  510 atttataatcactatctgagtttgtttttcacttaatct 548  Q
    |||||||||||| | |||||||||||| |||||||||||    
T  21504327 atttataatcaccaactgagtttgtttctcacttaatct 21504365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 78 - 462
Target Start/End: Original strand, 20313037 - 20313422
Alignment:
Q  78 cgtggtgagcgatgacaaacagttctacgggaagaaatctattttttc--ccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactc 175  Q
    ||||||||||||||||| |||| |||||||||||||| | | ||||||  ||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  20313037 cgtggtgagcgatgacagacagctctacgggaagaaacc-agtttttcagccaaaaacccaattttcaaccacccaaatcccaaattcaataggaaactc 20313135  T
Q  176 aacctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttct 275  Q
    || |||||||||||||| ||  ||||| ||| |   |||  ||||||| ||||||  ||||| ||| | |||||||||    |||  ||  |||||||||    
T  20313136 aatctatgtttattctataacttgaacatcaatttgtacactaattcattgaattctctacttttttagcaatcaattcca-aatcaaaatctaatttct 20313234  T
Q  276 ataa-catcaaaa-ctattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagattgg 373  Q
     ||| |||||||| | |  |||||| || |  ||||||||| |||||||| |||| || ||  |||| ||||| | |||| |||||||||||||||||||    
T  20313235 ctaatcatcaaaatcaaacaacaacaaccatgttaaaccctatttcagaattataaacccactattagagaagct-agtcccacccttaccttagattgg 20313333  T
Q  374 ttgaattcagactctataagcttgctcctcttctcttctctgacttctcactttctccccttttctcccaaaaacagtttctacgtatt 462  Q
    |||||||  ||||||| || |||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||    
T  20313334 ttgaattaggactctacaaacttgctcctcttctcttctctgacttatcactttctccctttttctcccaaaagcagtttctacgtatt 20313422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 400 - 550
Target Start/End: Complemental strand, 26758674 - 26758524
Alignment:
Q  400 cctcttctcttctctgacttctcactttctccccttttctcccaaaaacagtttctacgtattctgactttctaatttgttgtaaccctaattctctaat 499  Q
    ||||||||||| || |||||||||||||||||| ||||||| ||||| ||||||||||||||||||||| |||| ||||||| |||||||||||||||||    
T  26758674 cctcttctcttatccgacttctcactttctccctttttctcgcaaaagcagtttctacgtattctgactctctattttgttgcaaccctaattctctaat 26758575  T
Q  500 ggtctcatctatttataatcactatctgagtttgtttttcacttaatctct 550  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  26758574 ggtctcatctatttataatcactaactgagtttgtttctcacttaatctct 26758524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 209 - 368
Target Start/End: Complemental strand, 1627076 - 1626917
Alignment:
Q  209 ccttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaac-tattaacaactacaagctt 307  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||| | ||| ||||||| || ||||||||||| |||||||||||||||| ||    
T  1627076 ccttacgttaattcaatggtttacctactctttcaacaatcaattttgcaaataaactctaattt-tacaacatcaaaacctattaacaactacaaggtt 1626978  T
Q  308 aaaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttag 368  Q
    |||||||||||||| | || ||||| |||||||||||||||||||| ||||||||||||||    
T  1626977 aaaccctttttcaggattacatacttatgattaaagaaggttagtcacacccttaccttag 1626917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 266 - 447
Target Start/End: Original strand, 16063701 - 16063883
Alignment:
Q  266 cctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactatata-ctcatgattaaagaaggttagtctcacccttacc 364  Q
    ||||||| |||||||||||||||||  |||||||||||| ||||||||||||| |||| |||| | | ||| |||| |||| | ||||| ||||||||||    
T  16063701 cctaattcctataacatcaaaactaacaacaactacaaggttaaacccttttttagaattatacaacccattattagagaaaggtagtcccacccttacc 16063800  T
Q  365 ttagattggttgaattcagactctataagcttgctcctcttctc-ttctctgacttctcactttctccccttttctcccaaaaa 447  Q
    ||||||||||||||| ||||||||| |||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||    
T  16063801 ttagattggttgaatacagactctacaagcttgctcctcttctctttctctaacttctcactttct-cccttttctcccaaaaa 16063883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 262 - 372
Target Start/End: Original strand, 18744820 - 18744931
Alignment:
Q  262 taaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcaccct 360  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||  || ||| |||| |||| ||||||| ||||||    
T  18744820 taaccctaatttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagttagtcccaccct 18744919  T
Q  361 taccttagattg 372  Q
    ||||||||||||    
T  18744920 taccttagattg 18744931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 260 - 368
Target Start/End: Original strand, 26749976 - 26750084
Alignment:
Q  260 tttaaccctaatttctataacatcaaaact-attaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcacc 358  Q
    ||||||||||||| ||| |||||||||||| ||||||||||||||| |||||||| ||||||| | |||||||| ||||||||| |||||||||||||||    
T  26749976 tttaaccctaatt-ctacaacatcaaaacttattaacaactacaaggttaaaccccttttcaggattatatacttatgattaaaaaaggttagtctcacc 26750074  T
Q  359 cttaccttag 368  Q
    ||||||||||    
T  26750075 cttaccttag 26750084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 14025897 - 14025803
Alignment:
Q  278 aacatcaaaa-ctattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagatt 371  Q
    |||||||||| ||||||||||||||||| |||||||||||||||| | || ||||| |||||||||||||||||||| |||||||||||||||||    
T  14025897 aacatcaaaatctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccacccttaccttagatt 14025803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 263 - 454
Target Start/End: Complemental strand, 8503992 - 8503803
Alignment:
Q  263 aaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcaccctt 361  Q
    |||||||||| ||| ||||||||||| |||||||||||||||| |||||| ||| ||||| | || ||||| |||||| ||||||||||||| |||||||    
T  8503992 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaactcttgttcaggattacatacttatgattgaagaaggttagtcccaccctt 8503894  T
Q  362 accttagattggttgaattcagactctataagcttgctcctcttctc-ttctctgacttctcactttctccccttttctcccaaaaacagtttc 454  Q
    |||||| ||| | |  | || | |||||  || |||||||| ||||| || |||||||||||||||||| |||||||| ||||||| |||||||    
T  8503893 accttatattagat--aatcggtctctacgagattgctcctattctctttatctgacttctcactttct-cccttttcccccaaaagcagtttc 8503803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 209 - 290
Target Start/End: Complemental strand, 21398805 - 21398724
Alignment:
Q  209 ccttacgttaattcaatgaatt-acctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaacta 290  Q
    |||||||||||||||||| ||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  21398805 ccttacgttaattcaatggatttacctactctttcaacaaccaattttgcaatt-aaccctaatttctataacatcaaaacta 21398724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 263 - 368
Target Start/End: Original strand, 26762350 - 26762455
Alignment:
Q  263 aaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcaccctt 361  Q
    |||||||||| ||| ||||||||||| |||||||||||||||| |||||||||||||||| | || ||| | |||||||||||||||||||| |||||||    
T  26762350 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacataattatgattaaagaaggttagtcccaccctt 26762448  T
Q  362 accttag 368  Q
    |||||||    
T  26762449 accttag 26762455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 262 - 408
Target Start/End: Complemental strand, 23199313 - 23199168
Alignment:
Q  262 taaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcaccct 360  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||| ||||  || ||| |||| |||| | ||||| ||||||    
T  23199313 taaccctaatttctataacatcaaaactactaacaactacaaggttaaaccatttttcagaattatacaacccattattagagaaagctagtcccaccct 23199214  T
Q  361 taccttagattggttgaattcagactctataagcttgctcctcttctc 408  Q
    ||||||| ||| | |||  || ||||||| ||| |||||| |||||||    
T  23199213 taccttaaattagatga--tcggactctacaagattgctcttcttctc 23199168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 210 - 320
Target Start/End: Original strand, 24068125 - 24068234
Alignment:
Q  210 cttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaac-tattaacaactacaagctta 308  Q
    |||||||||||||||||  ||||||||| |||||||||| || ||  |||| |||||||||| ||| |||||||||||| |||||||||||||||| |||    
T  24068125 cttacgttaattcaatggtttacctactttttcaacaattaaatt--caatataaccctaatctctttaacatcaaaacctattaacaactacaaggtta 24068222  T
Q  309 aaccctttttca 320  Q
    ||||||||||||    
T  24068223 aaccctttttca 24068234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 147 - 253
Target Start/End: Original strand, 17011560 - 17011665
Alignment:
Q  147 acccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaaca 246  Q
    |||||||| |||||||  | ||||||||||||||||||||||||||||  |||||| ||| | |||| ||||||||| ||||||||||||||||| ||||    
T  17011560 acccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctactcttt-aaca 17011658  T
Q  247 atcaatt 253  Q
    |||||||    
T  17011659 atcaatt 17011665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 209 - 290
Target Start/End: Original strand, 22111871 - 22111951
Alignment:
Q  209 ccttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaacta 290  Q
    |||||||||||||| ||   ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  22111871 ccttacgttaattcgattgtttacctactctttcaacaaccaattttgcaa-ttaaccctaatttctataacatcaaaacta 22111951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 266 - 372
Target Start/End: Complemental strand, 6551392 - 6551285
Alignment:
Q  266 cctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcacccttacc 364  Q
    ||||||| ||||||||||||| |||  |||||||||||| |||||||||||||||||| ||||  ||| |  |||| |||| ||||||||||||||||||    
T  6551392 cctaattcctataacatcaaatctaacaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtctcacccttacc 6551293  T
Q  365 ttagattg 372  Q
    ||||||||    
T  6551292 ttagattg 6551285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 310 - 381
Target Start/End: Original strand, 21404080 - 21404151
Alignment:
Q  310 accctttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagattggttgaattc 381  Q
    |||||||||||||| |||| |||||||||||||||||||||||| || |||||||||||||||||| |||||    
T  21404080 accctttttcagaattatagactcatgattaaagaaggttagtcccatccttaccttagattggttaaattc 21404151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 263 - 364
Target Start/End: Complemental strand, 8833310 - 8833209
Alignment:
Q  263 aaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcaccctt 361  Q
    |||||||||| ||| ||||||||||| |||||||||||| ||| |||||||||||||||| | || ||||| ||||||||||||||| |||| |||||||    
T  8833310 aaccctaatt-ctacaacatcaaaacctattaacaactataaggttaaaccctttttcaggattacatacttatgattaaagaaggtcagtcccaccctt 8833212  T
Q  362 acc 364  Q
    |||    
T  8833211 acc 8833209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 149 - 253
Target Start/End: Original strand, 265872 - 265975
Alignment:
Q  149 ccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaat 248  Q
    |||||| |||||||  | ||||||||||||||||||||||||||||  |||||| ||| | |||| ||||||||| || |||||||||||||| ||||||    
T  265872 ccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcactggattacctactcttt-aacaat 265970  T
Q  249 caatt 253  Q
    |||||    
T  265971 caatt 265975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 247 - 453
Target Start/End: Complemental strand, 32607438 - 32607229
Alignment:
Q  247 atcaattttgcaatttaaccctaatttctataacatcaaaacta--ttaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaag 343  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    |||||| ||| | |||||||| |||| ||||  |||  || ||| |||| ||    
T  32607438 atcaattttgcaatttaactctaatttctataacatcaaaactaacaaaacaacaacatg-ttaaacccctttttagaatcatacaacccattattagag 32607340  T
Q  344 aaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctc---ttctctgacttctcactttctccccttttctc 440  Q
    || | ||||| ||||||||||||||||| | |  | || | |||||  || ||||||||||| ||   |||||||||||||||||||||| | |||||||    
T  32607339 aaagctagtcccacccttaccttagattagat--aatcggtctctacgagattgctcctcttttctctttctctgacttctcactttctctctttttctc 32607242  T
Q  441 ccaaaaacagttt 453  Q
    |||||| ||||||    
T  32607241 ccaaaagcagttt 32607229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 147 - 363
Target Start/End: Complemental strand, 21399018 - 21398800
Alignment:
Q  147 acccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaaca 246  Q
    |||||||| |||||||  | || ||||||  |||||||||||||||||| |||||| ||| |   |||  ||||| | |  ||||||||||||||  |||    
T  21399018 acccaaatcccaaattttatagaaaactcttcctatgtttattctacaacctgaacatcaatttgtacactaattaattagattacctactcttttgaca 21398919  T
Q  247 atcaattttgcaatttaaccctaatttctataacatcaaaactattaacaactacaa----gcttaaacccttttt-cagaactatatactcatgattaa 341  Q
    || || ||  |||| || ||||| | ||||||||||||||||||  |||||| ||||    | ||||||||||||| ||||| |||| ||||||||||||    
T  21398918 attaaatt--caatcta-ccctattctctataacatcaaaactaacaacaacaacaacaaaggttaaacccttttttcagaattatacactcatgattaa 21398822  T
Q  342 agaaggttagtctcacccttac 363  Q
    |||||||||||| |||||||||    
T  21398821 agaaggttagtcccacccttac 21398800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 402 - 453
Target Start/End: Complemental strand, 21398597 - 21398546
Alignment:
Q  402 tcttctcttctctgacttctcactttctccccttttctcccaaaaacagttt 453  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  21398597 tcttctcttctctgacttctcactttctccctttttctcccaaaagcagttt 21398546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 337 - 447
Target Start/End: Original strand, 31622139 - 31622249
Alignment:
Q  337 attaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctc-ttctctgacttctcactttctcccctt 435  Q
    |||| |||| |||| || ||||||||||||||||| | ||  ||||||||||| ||||||||| || || || ||||||||||||||||||||| |||||    
T  31622139 attagagaaagttaatcccacccttaccttagattagatggtttcagactctacaagcttgcttctattttctttctctgacttctcactttct-ccctt 31622237  T
Q  436 ttctcccaaaaa 447  Q
    |||| |||||||    
T  31622238 ttcttccaaaaa 31622249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 167 - 253
Target Start/End: Original strand, 29448692 - 29448777
Alignment:
Q  167 aggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaatt 253  Q
    ||||||||||||||||||||||||||||  |||||| ||| | |||| ||||||||| ||  ||||||||||||| |||||||||||    
T  29448692 aggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattggtttacctactcttt-aacaatcaatt 29448777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 9776917 - 9776994
Alignment:
Q  126 ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 202  Q
    |||||||||||||||| || |||||||||  |||||||  | |||||||| |||||||||||||||||||||||||||    
T  9776917 ccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgtttattctacaatctgaac 9776994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 37804313 - 37804236
Alignment:
Q  126 ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 202  Q
    |||||||||||||||| || |||||||||  |||||||  | |||||||||||| |||||||||||||||||||||||    
T  37804313 ccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctacaatctgaac 37804236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 660736 - 660801
Alignment:
Q  262 taaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata 328  Q
    |||||| ||||||||||||||||||||||  |||||||||||| ||||| |||||||||||| ||||    
T  660736 taacccaaatttctataacatcaaaactaacaacaactacaaggttaaa-cctttttcagaattata 660801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 401 - 473
Target Start/End: Original strand, 21404186 - 21404256
Alignment:
Q  401 ctcttctcttctctgacttctcactttctccccttttctcccaaaaacagtttctacgtattctgactttcta 473  Q
    |||||||||||||||||||||||||||||  | ||||||||||||||  |||| ||||| |||||||| ||||    
T  21404186 ctcttctcttctctgacttctcactttct--ctttttctcccaaaaattgtttttacgtgttctgactctcta 21404256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 33472804 - 33472727
Alignment:
Q  126 ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 202  Q
    |||||||||||||||| || |||||||||| |||||||  | |||||||| |||||||| ||||||||||| ||||||    
T  33472804 ccaaaaacccaatttttcatccacccaaatcccaaatttgataggaaacttaacctatgattattctacaacctgaac 33472727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 30138282 - 30138199
Alignment:
Q  168 ggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaa 251  Q
    ||||||| |||||||| ||||||||||| |||||| ||||  | || ||||||||| || ||| ||||| ||||||||||||||    
T  30138282 ggaaacttaacctatgattattctacaacctgaacatcatatcatatgttaattcattggattgcctacactttcaacaatcaa 30138199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 31456721 - 31456787
Alignment:
Q  185 ttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaa 251  Q
    ||||||||||| |||||| ||| | | || ||||||||| |||||||||||| ||||||||||||||    
T  31456721 ttattctacaacctgaacatcaattcatatgttaattcattgaattacctacactttcaacaatcaa 31456787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 27868815 - 27868738
Alignment:
Q  126 ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 202  Q
    |||||||||||||||| || |||||||||  |||||||  | |||||||| |||||||| ||||||||||| ||||||    
T  27868815 ccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaac 27868738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 262 - 318
Target Start/End: Complemental strand, 1627174 - 1627118
Alignment:
Q  262 taaccctaatttctataacatcaaaactattaacaactacaagcttaaacccttttt 318  Q
    |||||||||||||||||||||||||||||  || || ||||||  ||||||||||||    
T  1627174 taaccctaatttctataacatcaaaactaacaataaatacaagggtaaacccttttt 1627118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 482 - 548
Target Start/End: Complemental strand, 28710268 - 28710200
Alignment:
Q  482 taaccctaattctctaatggtctcatctatttataatcactatctgagttt-gtttt-tcacttaatct 548  Q
    ||||||||||||| ||||| |||  |||||||||||||||||| ||||||| ||||| |||||||||||    
T  28710268 taaccctaattctttaatgctcttctctatttataatcactatttgagtttagttttctcacttaatct 28710200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 17875927 - 17875993
Alignment:
Q  185 ttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaa 251  Q
    ||||||||||| |||||| ||| | | || ||||||||| || ||||||||| ||||||||||||||    
T  17875927 ttattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 17875993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 21299995 - 21299942
Alignment:
Q  401 ctcttctcttctct-gacttctcactttctccccttttctcccaaaaacagtttc 454  Q
    ||||||| |||||| |||||||||||||||||| ||||||||||||| |||||||    
T  21299995 ctcttcttttctcttgacttctcactttctccc-ttttctcccaaaagcagtttc 21299942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 337 - 377
Target Start/End: Original strand, 20566568 - 20566608
Alignment:
Q  337 attaaagaaggttagtctcacccttaccttagattggttga 377  Q
    |||| |||| |||||||||||||||||||||||||| ||||    
T  20566568 attagagaaagttagtctcacccttaccttagattgattga 20566608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 303; Significance: 1e-170; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 10 - 550
Target Start/End: Original strand, 34392461 - 34393010
Alignment:
Q  10 gcgagtagaacactcaccngttgcgagttgatatcgaagtcactcgcaaggcgaacaagatcacccgccgtggtgagcgatgacaaacagttctacggga 109  Q
    ||||||||||||||| || |||||||||||| ||||||||||||||| |||||||||||||||| |||||||| ||||||||||| ||||||||||||||    
T  34392461 gcgagtagaacactcgcc-gttgcgagttgacatcgaagtcactcgcgaggcgaacaagatcactcgccgtggcgagcgatgacagacagttctacggga 34392559  T
Q  110 agaaatctattttttcccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaa-tctgaacctcatt 208  Q
    ||||| || ||||   ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  34392560 agaaacctgttttcagccaaaaacccaattttcaagcacccaaatcccaaattcaaaaggaaactcaacctatgtttattctacaattctgaacctcatt 34392659  T
Q  209 ccttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaacta--ttaacaactacaagct 306  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||| ||| | |    
T  34392660 ccttacgttaattcaatggattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaacaacaacatg-t 34392758  T
Q  307 taaaccctttttcagaactata-tactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctctt 405  Q
    ||||||| |||| ||||  |||  || ||| |||| |||| | ||||| ||||||||||||||||||||||||||  ||||||| ||| |||||| | ||    
T  34392759 taaacccctttttagaatcatacaacccattattagagaaagctagtcacacccttaccttagattggttgaatttggactctacaagattgctcatatt 34392858  T
Q  406 ctcttctctgacttctcactttctccccttttctcccaaaaacagtttctac-------gtattctgactttctaatttgttgtaaccctaattctctaa 498  Q
    ||||||||||||||||||||||||||  |||||||||||||  |||||||||       ||||||||||| |||| | | ||||||||||||||||||||    
T  34392859 ctcttctctgacttctcactttctccttttttctcccaaaaggagtttctacgtattctgtattctgactctctattcttttgtaaccctaattctctaa 34392958  T
Q  499 tggtctcatctatttataatcactatctgagtttgtttttcacttaatctct 550  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  34392959 tggtctcatctatttataatcactaactgagtttgtttctcacttaatctct 34393010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 20 - 432
Target Start/End: Complemental strand, 21188380 - 21187968
Alignment:
Q  20 cactcaccngttgcgagttgatatcgaagtcactcgcaaggcgaacaagatc-acccgccgtggtgagcgatgacaaacagttctacgggaagaaatcta 118  Q
    |||||||| |||||||||| | ||||||| ||||||| |||||||||||||| || ||||||||  |||||||||| | || | |||||| | ||| |      
T  21188380 cactcacc-gttgcgagttaacatcgaagccactcgcgaggcgaacaagatccactcgccgtggcaagcgatgacagatagctttacgggcataaaccag 21188282  T
Q  119 ttttttcccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgtta 218  Q
    ||||  ||||||||||| | || |||| |||||||| |||||||  | |||||||   || |||  ||||||||||| |||||| ||| |  |||  |||    
T  21188281 ttttcacccaaaaaccccaattacaactacccaaatcccaaatttgataggaaacattacatattcttattctacaacctgaacatcaatttttatatta 21188182  T
Q  219 attcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactattaacaactacaagcttaaacccttttt 318  Q
    ||||| || ||||||||| |||||||||||||| || ||||||||| ||||| |||||||||||||||||||| |||||||||||  ||||| ||||| |    
T  21188181 attcattggattacctacactttcaacaatcaaatt-gcaatttaaacctaacttctataacatcaaaactatcaacaactacaaaattaaatcctttct 21188083  T
Q  319 cagaactatatactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcag-actctataagcttgctcctcttctcttctctgac 417  Q
    || || |||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||| | | |||| || ||| ||| ||||||||||||||||    
T  21188082 caaaattatatactcatgattaaaaaaggttagtcccacccttaccttagattggttaaattctgaattctacaaactttctcttcttctcttctctgac 21187983  T
Q  418 ttctcactttctccc 432  Q
    |||||||||||||||    
T  21187982 ttctcactttctccc 21187968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 263 - 432
Target Start/End: Original strand, 39061268 - 39061437
Alignment:
Q  263 aaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcaccctta 362  Q
    |||||||| |||||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||| ||| ||||    
T  39061268 aaccctaaattctataacatcaaaactatcaacaactacaaggttaaaccttttttcagaattatatactcatgattacagaaggttagtcccactctta 39061367  T
Q  363 ccttagattggttgaattcagactctataagcttgctcctcttctcttctctgacttctcactttctccc 432  Q
    |||||||| |||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||    
T  39061368 ccttagataggttgaattcagactctacaagtttgctcatcttctcttctctgacttctcactttctccc 39061437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 288 - 447
Target Start/End: Complemental strand, 21243837 - 21243678
Alignment:
Q  288 ctattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcaccctta-ccttagattggttgaattcagact 386  Q
    ||||||||||||||||| |||||||||||||||| | || ||| | ||||||||||||||||||||||||||||| ||||||||| | ||| | | ||||    
T  21243837 ctattaacaactacaaggttaaaccctttttcaggattacatatttatgattaaagaaggttagtctcacccttacccttagattagatgattccggact 21243738  T
Q  387 ctataagcttgctcctcttctc-ttctctgacttctcactttctccccttttctcccaaaaa 447  Q
    ||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  21243737 cta-aagcttgctcctcttctctttctctgacttctcactttct-cccttttctcccaaaaa 21243678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 128 - 453
Target Start/End: Original strand, 8306417 - 8306743
Alignment:
Q  128 aaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatga 227  Q
    ||||||| || ||||| | |||||||| |||||||  | |||||||| |||||||| |||||| |||||||||||  || |  |||| ||||||||  |     
T  8306417 aaaaaccaaaatttcatctacccaaatcccaaatttgataggaaacttaacctatgattattcaacaatctgaacaccaattattaccttaattcatcgg 8306516  T
Q  228 attacctactctttcaacaatcaattttgcaattt--aaccctaatttctataacatcaaaactattaacaactaca--agcttaaaccctttttcagaa 323  Q
    ||||||||||||||||||||||||||||  |||||  ||||||||||||||||||||||||||||  || ||| |||  |  |||||||| |||| ||||    
T  8306517 attacctactctttcaacaatcaatttt--aatttcaaaccctaatttctataacatcaaaactaacaa-aacgacaacatgttaaacccctttttagaa 8306613  T
Q  324 ctata-tactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctc-ttctctgacttct 421  Q
     ||||  || ||| |||| |||| | ||||| ||| ||||||||||||| | |||  || | |||||  || |||||||||||||| |||||||||||||    
T  8306614 ttatacaacccattattagagaaagctagtcccactcttaccttagattagatga--tcggtctctacgagattgctcctcttctctttctctgacttct 8306711  T
Q  422 cactttctccccttttctcccaaaaacagttt 453  Q
    ||||||||||| ||||||| ||||| ||||||    
T  8306712 cactttctccctttttctctcaaaagcagttt 8306743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 209 - 474
Target Start/End: Original strand, 45499434 - 45499701
Alignment:
Q  209 ccttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaacta--ttaacaactacaagct 306  Q
    ||||||||||| |||||   ||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||    |||||| ||| | |    
T  45499434 ccttacgttaaatcaatagtttacctactctttcaacaatcaactttgcaatttaaccctaatttctataacgttaaaactaacaaaacaacaacatg-t 45499532  T
Q  307 taaaccctttttcagaactata-tactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctctt 405  Q
    ||||||| |||  ||||  |||  || ||| |||| |||| | |||||||||||||||||||||||   ||| | | ||||||| |||||||||||||||    
T  45499533 taaacccctttatagaatcatacaacccattattagagaaagctagtctcacccttaccttagattatatgattccggactcta-aagcttgctcctctt 45499631  T
Q  406 ctc-ttctctgacttctcactttctccccttttctccc-aaaaacagtttctacgtattctgactttctaa 474  Q
    ||| |||||||||||||||| || || ||||||||||| |||||||||||  ||||||||| | |||||||    
T  45499632 ctctttctctgacttctcacatt-tctccttttctcccaaaaaacagtttgcacgtattctaattttctaa 45499701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 262 - 464
Target Start/End: Complemental strand, 28476840 - 28476625
Alignment:
Q  262 taaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcaccct 360  Q
    |||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||| ||||  |||||| |||| ||||   ||||| ||||||    
T  28476840 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaactcattattagagaaatctagtcccaccct 28476741  T
Q  361 taccttagattggttgaattcagactctataagcttgctcctcttct--------------cttctctgacttctcactttctccccttttctcccaaaa 446  Q
    ||||||||||| | |||   | ||||||  ||| |||||||||||||              ||||||||||||||||||||||||| |||||||||||||    
T  28476740 taccttagattagatga--ccggactctgcaagattgctcctcttctcacaagattcttcccttctctgacttctcactttctccctttttctcccaaaa 28476643  T
Q  447 acagtttctacgtattct 464  Q
     |||||||||| ||||||    
T  28476642 gcagtttctacatattct 28476625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 306 - 447
Target Start/End: Complemental strand, 17901856 - 17901714
Alignment:
Q  306 ttaaaccctttttcagaactatata-ctcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctct 404  Q
    |||||||||||||||||| |||| | | ||| |||| |||| | ||||||||||||||||||||| | | ||| | | ||||||| ||||||||||||||    
T  17901856 ttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttaccttagaatagatgattccggactcta-aagcttgctcctct 17901758  T
Q  405 tctctt-ctctgacttctcactttctccccttttctcccaaaaa 447  Q
    |||||| |||||||||||||||||||||| ||||||||||||||    
T  17901757 tctctttctctgacttctcactttctccctttttctcccaaaaa 17901714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 263 - 368
Target Start/End: Complemental strand, 38887191 - 38887086
Alignment:
Q  263 aaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcaccctt 361  Q
    |||||||||| ||| ||||||||||| |||||||||||||||| |||||||||||||||| | || ||||| ||||||||||||||||||| ||||||||    
T  38887191 aaccctaatt-ctacaacatcaaaacctattaacaactacaagattaaaccctttttcaggattacatacttatgattaaagaaggttagtttcaccctt 38887093  T
Q  362 accttag 368  Q
    |||||||    
T  38887092 accttag 38887086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 210 - 320
Target Start/End: Original strand, 40390046 - 40390155
Alignment:
Q  210 cttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaa-ctattaacaactacaagctta 308  Q
    |||||||||||||||||  |||||||||||||||||||| || ||  |||| |||||||||| ||| ||||||||||| ||||||||||||||||| |||    
T  40390046 cttacgttaattcaatggtttacctactctttcaacaattaaatt--caatataaccctaatatctttaacatcaaaacctattaacaactacaaggtta 40390143  T
Q  309 aaccctttttca 320  Q
    ||||||||||||    
T  40390144 aaccctttttca 40390155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 263 - 368
Target Start/End: Complemental strand, 14792667 - 14792562
Alignment:
Q  263 aaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcaccctt 361  Q
    |||||||||| ||| |||||| |||| |||||||||||||||| |||||||||||||||| | || ||||| |||||||||||||||||||| |||||||    
T  14792667 aaccctaatt-ctacaacatcgaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaccctt 14792569  T
Q  362 accttag 368  Q
    |||||||    
T  14792568 accttag 14792562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 356 - 464
Target Start/End: Original strand, 35895140 - 35895248
Alignment:
Q  356 acccttaccttagattggttgaattcagactctataagcttgctcctcttctc-ttctctgacttctcactttctccccttttctcccaaaaacagtttc 454  Q
    |||| ||||||||||| | ||| |||| |||||| |||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||     
T  35895140 acccataccttagattagatgatttcaaactctacaagcttgctcctcttctctttctctgacttctctctttct-cccttttctcccaaaaacagtttt 35895238  T
Q  455 tacgtattct 464  Q
     |||||||||    
T  35895239 cacgtattct 35895248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 258 - 328
Target Start/End: Complemental strand, 24719620 - 24719550
Alignment:
Q  258 aatttaaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata 328  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||    
T  24719620 aatttaaccttaatttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattata 24719550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 272 - 368
Target Start/End: Original strand, 18121559 - 18121656
Alignment:
Q  272 ttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttag 368  Q
    ||||| ||||||||||| |||||||||||||||| ||||| |||||||||| | || ||||| ||||||||||||||||| || ||||||||||||||    
T  18121559 ttctacaacatcaaaacctattaacaactacaaggttaaatcctttttcaggattacatacttatgattaaagaaggttaatcccacccttaccttag 18121656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 306 - 447
Target Start/End: Original strand, 6834166 - 6834307
Alignment:
Q  306 ttaaaccctttttcagaactatata-ctcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctct 404  Q
    |||||||||||||||||| |||| | ||||| |||| |||| | |||| |||||||| ||||||| | | ||| | | ||||||| ||||||||||||||    
T  6834166 ttaaaccctttttcagaattatacaactcattattagagaaagctagtatcacccttgccttagaatagatgattccggactcta-aagcttgctcctct 6834264  T
Q  405 tctc-ttctctgacttctcactttctccccttttctcccaaaaa 447  Q
    |||| ||||| ||||||||||||||| |||||||||||||||||    
T  6834265 tctctttctccgacttctcactttct-cccttttctcccaaaaa 6834307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 126 - 253
Target Start/End: Complemental strand, 29763873 - 29763747
Alignment:
Q  126 ccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaat 225  Q
    |||||| ||| | ||||| |||||||||| |||||||  | |||||||||||| ||||||||||||||| ||| ||| ||| | |||| ||||||||| |    
T  29763873 ccaaaagccccaatttcatccacccaaatcccaaatttgataggaaactcaacttatgtttattctacagtctaaacttcaattcttatgttaattcatt 29763774  T
Q  226 gaattacctactctttcaacaatcaatt 253  Q
    | |||||||||||||| |||||||||||    
T  29763773 gtattacctactcttt-aacaatcaatt 29763747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 273 - 367
Target Start/End: Complemental strand, 41225549 - 41225454
Alignment:
Q  273 tctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttacctta 367  Q
    |||| ||||||||||| ||||| ||||| |||| |||||||||||||||| | || ||||| |||||||||||||||||||| |||||||||||||    
T  41225549 tctacaacatcaaaacctattatcaactgcaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccacccttacctta 41225454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 273 - 367
Target Start/End: Complemental strand, 41226802 - 41226707
Alignment:
Q  273 tctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttacctta 367  Q
    |||| ||||||||||| ||||| ||||| |||| |||||||||||||||| | || ||||| |||||||||||||||||||| |||||||||||||    
T  41226802 tctacaacatcaaaacctattatcaactgcaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccacccttacctta 41226707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 126 - 253
Target Start/End: Complemental strand, 46197986 - 46197860
Alignment:
Q  126 ccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaat 225  Q
    |||||| ||| | ||||| | |||||||| |||||||  | ||||||||||||||||||||||||||||  |||||| ||| | |||| ||||||||| |    
T  46197986 ccaaaagccccaatttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcatt 46197887  T
Q  226 gaattacctactctttcaacaatcaatt 253  Q
    | |||||||||||||| |||||||||||    
T  46197886 ggattacctactcttt-aacaatcaatt 46197860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 228 - 368
Target Start/End: Original strand, 44892362 - 44892502
Alignment:
Q  228 attacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaacta 326  Q
    |||| |||||||||| ||||||||||||    |  |||||||||| ||| || |||||||| |||||||||||||||| ||||| |||||||||  | ||    
T  44892362 attatctactctttctacaatcaattttagtttcaaaccctaatt-ctacaatatcaaaacctattaacaactacaaggttaaatcctttttcaagatta 44892460  T
Q  327 tatactcatgattaaagaaggttagtctcacccttaccttag 368  Q
     ||||| |||||||||||||||||||| |||||||| |||||    
T  44892461 catacttatgattaaagaaggttagtcccacccttaacttag 44892502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 263 - 378
Target Start/End: Complemental strand, 20708163 - 20708048
Alignment:
Q  263 aaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactatata-ctcatgattaaagaaggttagtctcaccctt 361  Q
    ||||||||||||| |||||||| || ||| ||||||  |||  |||| ||||||||||||| |||| | |||||| |||||||||||||||| |||||||    
T  20708163 aaccctaatttctttaacatcacaattatcaacaacatcaaagttaacccctttttcagaattatagaactcatg-ttaaagaaggttagtcccaccctt 20708065  T
Q  362 accttagattggttgaa 378  Q
    |||||||||||| ||||    
T  20708064 accttagattggatgaa 20708048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 126 - 253
Target Start/End: Original strand, 50001287 - 50001413
Alignment:
Q  126 ccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaat 225  Q
    |||||| ||| | ||||| | |||||||| | |||||  | |||||||||||| |||||||||||||||  |||||| ||| | |||| ||||||||| |    
T  50001287 ccaaaagccccaatttcatcaacccaaatccaaaatttgataggaaactcaacatatgtttattctacagcctgaacttcaattcttatgttaattcatt 50001386  T
Q  226 gaattacctactctttcaacaatcaatt 253  Q
    |||||||||||||||| |||||||||||    
T  50001387 gaattacctactcttt-aacaatcaatt 50001413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 12710813 - 12710879
Alignment:
Q  262 taaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata 328  Q
    ||||| |||||||||||||||||||||||  |||||||||||| |||||||||||||||||| ||||    
T  12710813 taaccttaatttctataacatcaaaactaacaacaactacaagattaaaccctttttcagaattata 12710879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 247 - 290
Target Start/End: Original strand, 20588566 - 20588609
Alignment:
Q  247 atcaattttgcaatttaaccctaatttctataacatcaaaacta 290  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  20588566 atcaattttgcaatttaaccctaatttctataacatcaaaacta 20588609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 247 - 290
Target Start/End: Original strand, 20593104 - 20593147
Alignment:
Q  247 atcaattttgcaatttaaccctaatttctataacatcaaaacta 290  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  20593104 atcaattttgcaatttaaccctaatttctataacatcaaaacta 20593147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 381 - 447
Target Start/End: Complemental strand, 22823222 - 22823156
Alignment:
Q  381 cagactctataagcttgctcctcttctctt-ctctgacttctcactttctccccttttctcccaaaaa 447  Q
    |||| |||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  22823222 cagaatctacaagcttgctcctcttctctttctctgacttctcactttct-cccttttctcccaaaaa 22823156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 263 - 368
Target Start/End: Complemental strand, 24007330 - 24007224
Alignment:
Q  263 aaccctaatttctataacatcaaaactattaacaactac-aagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcaccctt 361  Q
    ||||||||| ||||||||||||||||||  ||||||||| ||| ||||||| |||||||||| |||| | |||| || | |||| | ||||| |||||||    
T  24007330 aaccctaatctctataacatcaaaactaacaacaactacaaaggttaaaccttttttcagaattatacaatcattatcagagaaagctagtcccaccctt 24007231  T
Q  362 accttag 368  Q
    |||||||    
T  24007230 accttag 24007224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 297167 - 297244
Alignment:
Q  126 ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 202  Q
    |||||||||||||||| || |||||||||  |||||||  | ||||||||||||||||||||||||||||| ||||||    
T  297167 ccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaacctgaac 297244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 170 - 367
Target Start/End: Complemental strand, 22145866 - 22145666
Alignment:
Q  170 aaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaat-caattttgcaatttaaccct 268  Q
    |||||| ||||||| ||| |||||||  ||||| ||| |  |||| |||||||| || ||||||||||| ||||||||| |||||||    | ||||| |    
T  22145866 aaactctacctatgattaatctacaacttgaacatcaattattactttaattcattggattacctactccttcaacaattcaattttaatttctaacctt 22145767  T
Q  269 aatttctataa-catcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcacccttacctt 366  Q
    ||||| | ||| | ||||| |||  |||||||||||| |||||||||||||||||| || |  || ||| |||| |||| ||||||| ||||||||||||    
T  22145766 aatttatctaatcctcaaacctaacaacaactacaaggttaaaccctttttcagaattaaacaacccattattagagaaagttagtcccacccttacctt 22145667  T
Q  367 a 367  Q
    |    
T  22145666 a 22145666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 293 - 372
Target Start/End: Original strand, 50544849 - 50544929
Alignment:
Q  293 aacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcacccttaccttagattg 372  Q
    |||||||||||| |||||||||||||||||| ||||  || ||| |||| |||| | ||||||||||||||||||||||||    
T  50544849 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttaccttagattg 50544929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 278 - 368
Target Start/End: Complemental strand, 8276079 - 8275988
Alignment:
Q  278 aacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcacccttaccttag 368  Q
    |||||||||| ||| |||||||||||| |||||||||||||||||| ||||  |||||| |||| | || | ||||| ||||||||||||||    
T  8276079 aacatcaaaaatatcaacaactacaaggttaaaccctttttcagaattataccactcattattagataaagctagtcacacccttaccttag 8275988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 255
Target Start/End: Complemental strand, 21239282 - 21239155
Alignment:
Q  128 aaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatga 227  Q
    |||| ||||||||||| | |||||||| | |||||  | || |||||| ||||||| ||||||||||| ||||||  || |  |||| ||| ||||  |     
T  21239282 aaaatcccaattttcatcaacccaaatcctaaatttgatagaaaactctacctatgattattctacaaactgaacaccaattattaccttagttcatcgg 21239183  T
Q  228 attacctactctttcaacaatcaatttt 255  Q
    ||||||||||||||||||||||||||||    
T  21239182 attacctactctttcaacaatcaatttt 21239155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 38056762 - 38056668
Alignment:
Q  278 aacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcacccttaccttagatt 371  Q
    |||||||||||||  |||||||||||| |||||||||||||||||| ||||  || ||| | || |||| | ||||| |||||||||||||||||    
T  38056762 aacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattactagagaaagctagtcccacccttaccttagatt 38056668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 372
Target Start/End: Complemental strand, 11808230 - 11808186
Alignment:
Q  328 atactcatgattaaagaaggttagtctcacccttaccttagattg 372  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||    
T  11808230 atacttatgattaaagaaggttagtctcacccttaccttggattg 11808186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 128 - 251
Target Start/End: Complemental strand, 7052252 - 7052129
Alignment:
Q  128 aaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatga 227  Q
    |||||||||| ||||| | |||||||| ||||||   | |||||||| |||||||| ||||| ||||| ||||||  || |  |||| ||||||||        
T  7052252 aaaaacccaaatttcatctacccaaatcccaaatatgataggaaacttaacctatgattattttacaacctgaacaccaattattaccttaattcatcag 7052153  T
Q  228 attacctactctttcaacaatcaa 251  Q
    ||||||||||||||||||||||||    
T  7052152 attacctactctttcaacaatcaa 7052129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 402 - 464
Target Start/End: Original strand, 12710966 - 12711029
Alignment:
Q  402 tcttctcttctctgacttctcactttctccccttttctcccaaaaacag-tttctacgtattct 464  Q
    ||||||||||||||||||||||||||| ||  ||||||||| ||| ||| ||||||||||||||    
T  12710966 tcttctcttctctgacttctcactttcaccatttttctccctaaagcagttttctacgtattct 12711029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 128 - 251
Target Start/End: Complemental strand, 24723699 - 24723576
Alignment:
Q  128 aaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatga 227  Q
    |||||||||| |||||   |||||||| |||||||  | |||||||| |||||||| ||||||||||| ||||||  || |  |||| ||||||||        
T  24723699 aaaaacccaaatttcatttacccaaatcccaaatttgataggaaacttaacctatgattattctacaacctgaacaccaattattaccttaattcatcat 24723600  T
Q  228 attacctactctttcaacaatcaa 251  Q
    ||||| ||||||||||||||||||    
T  24723599 attacatactctttcaacaatcaa 24723576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 401 - 446
Target Start/End: Complemental strand, 14237622 - 14237577
Alignment:
Q  401 ctcttctcttctctgacttctcactttctccccttttctcccaaaa 446  Q
    |||||||||||||| ||||||||||||||||| |||||||| ||||    
T  14237622 ctcttctcttctcttacttctcactttctccctttttctccaaaaa 14237577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 401 - 446
Target Start/End: Original strand, 46560163 - 46560208
Alignment:
Q  401 ctcttctcttctctgacttctcactttctccccttttctcccaaaa 446  Q
    |||||||||||||| ||||||||||||||||| |||||||| ||||    
T  46560163 ctcttctcttctcttacttctcactttctccctttttctccaaaaa 46560208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 147 - 255
Target Start/End: Complemental strand, 17902022 - 17901914
Alignment:
Q  147 acccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaaca 246  Q
    |||||||| |||||||  | || |||||| ||||||| ||||||||||| ||||||  || |  |||| ||| ||||  | |||| ||||||||||||||    
T  17902022 acccaaatcccaaatttgatagaaaactctacctatgattattctacaacctgaacaccaattattaccttagttcatcggattatctactctttcaaca 17901923  T
Q  247 atcaatttt 255  Q
    |||||||||    
T  17901922 atcaatttt 17901914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 409 - 453
Target Start/End: Complemental strand, 20846382 - 20846338
Alignment:
Q  409 ttctctgacttctcactttctccccttttctcccaaaaacagttt 453  Q
    ||||||||||||||||||| |||| ||||||||||||| ||||||    
T  20846382 ttctctgacttctcactttttccctttttctcccaaaagcagttt 20846338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 409 - 453
Target Start/End: Complemental strand, 28193605 - 28193561
Alignment:
Q  409 ttctctgacttctcactttctccccttttctcccaaaaacagttt 453  Q
    |||||||||||||||||||||| | ||||||||||||| ||||||    
T  28193605 ttctctgacttctcactttctcactttttctcccaaaagcagttt 28193561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 402 - 453
Target Start/End: Complemental strand, 38056641 - 38056589
Alignment:
Q  402 tcttctcttctct-gacttctcactttctccccttttctcccaaaaacagttt 453  Q
    ||||||||||||| | |||||||||||||||| ||||||||||||| ||||||    
T  38056641 tcttctcttctcttggcttctcactttctccctttttctcccaaaagcagttt 38056589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 470 - 548
Target Start/End: Original strand, 21496788 - 21496863
Alignment:
Q  470 tctaatttgttgtaaccctaattctctaatggtctcatctatttataatcactatctgagtttgtttttcacttaatct 548  Q
    |||| |||||||||||||||||||||||||  |||| ||||||||||| ||| |   |||||||||| |||||||||||    
T  21496788 tctattttgttgtaaccctaattctctaatcttctc-tctatttataaacacca--agagtttgtttctcacttaatct 21496863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 368
Target Start/End: Original strand, 42697806 - 42697837
Alignment:
Q  337 attaaagaaggttagtctcacccttaccttag 368  Q
    ||||||||||||||||||||||||||||||||    
T  42697806 attaaagaaggttagtctcacccttaccttag 42697837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 368
Target Start/End: Original strand, 45755542 - 45755573
Alignment:
Q  337 attaaagaaggttagtctcacccttaccttag 368  Q
    ||||||||||||||||||||||||||||||||    
T  45755542 attaaagaaggttagtctcacccttaccttag 45755573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 402 - 440
Target Start/End: Original strand, 22350810 - 22350848
Alignment:
Q  402 tcttctcttctctgacttctcactttctccccttttctc 440  Q
    |||||| |||| |||||||||||||||||||||||||||    
T  22350810 tcttcttttctttgacttctcactttctccccttttctc 22350848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 23194750 - 23194676
Alignment:
Q  128 aaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 202  Q
    ||||| |||| ||||| | ||||||| ||||||||  | |||||||| |||||||| ||||||||||| ||||||    
T  23194750 aaaaaaccaaatttcatctacccaaactccaaatttgataggaaacttaacctatgattattctacaacctgaac 23194676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 44822312 - 44822246
Alignment:
Q  185 ttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaa 251  Q
    ||||||||||| |||||| ||| | | || ||||||||| || ||||||||| ||||||||||||||    
T  44822312 ttattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 44822246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 286
Target Start/End: Original strand, 22350570 - 22350641
Alignment:
Q  216 ttaattcaatgaattacctactctttcaacaatcaattttgcaatt--taaccctaatttctataacatcaaa 286  Q
    |||||||| |||||||||||| | ||||||||||||  ||||||||   |||||||| |||||||||||||||    
T  22350570 ttaattcattgaattacctacaccttcaacaatcaa-attgcaattcaaaaccctaacttctataacatcaaa 22350641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 372
Target Start/End: Original strand, 22350716 - 22350773
Alignment:
Q  315 ttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagattg 372  Q
    |||||||||  |||||||||  ||||  ||||||||||| ||||||||||||||||||    
T  22350716 ttttcagaatcatatactcagaattattgaaggttagtcccacccttaccttagattg 22350773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 323
Target Start/End: Complemental strand, 22823276 - 22823218
Alignment:
Q  263 aaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaa 323  Q
    |||||||| |||||||| ||||||||||| |||||| |||||||  ||||||||| |||||    
T  22823276 aaccctaacttctataatatcaaaactatcaacaacgacaagct--aacccttttccagaa 22823218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 439
Target Start/End: Original strand, 51083255 - 51083292
Alignment:
Q  402 tcttctcttctctgacttctcactttctccccttttct 439  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  51083255 tcttctcttctcttacttctcactttctccctttttct 51083292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 345 - 377
Target Start/End: Complemental strand, 7320616 - 7320584
Alignment:
Q  345 aggttagtctcacccttaccttagattggttga 377  Q
    ||||||||| |||||||||||||||||||||||    
T  7320616 aggttagtcccacccttaccttagattggttga 7320584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 325 - 377
Target Start/End: Original strand, 7703132 - 7703184
Alignment:
Q  325 tatatactcatgattaaagaaggttagtctcacccttaccttagattggttga 377  Q
    |||| |||||| |||| |||| | ||||| |||||||||||||||||||||||    
T  7703132 tataaactcattattagagaaagctagtcccacccttaccttagattggttga 7703184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 298; Significance: 1e-167; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 10 - 548
Target Start/End: Complemental strand, 22610622 - 22610081
Alignment:
Q  10 gcgagtagaacactcaccngttgcgagttgatatcgaagtcactcgcaaggcgaacaagatcacccgccgtggtgagcgatgacaaacagttctacggga 109  Q
    ||||||||||||||  || |||||||||||| ||||||||||||||| |||||||||||||||| |||||||| ||||||||||| ||||||||||||||    
T  22610622 gcgagtagaacacttgcc-gttgcgagttgacatcgaagtcactcgcgaggcgaacaagatcactcgccgtggcgagcgatgacagacagttctacggga 22610524  T
Q  110 agaaatctattttttcccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattc 209  Q
    ||||| || ||||   ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22610523 agaaacctgttttcagccaaaaacccaattttcaaccacccaaatccaaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattc 22610424  T
Q  210 cttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactattaacaactacaagcttaa 309  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||  || ||  ||| | ||||    
T  22610423 cttacgttaattcaatggattacctactctttcaacaatcaattttacaaattaaccataatttctataacatcaaaactaacaa-aataacatg-ttaa 22610326  T
Q  310 accctttttcagaactata-tactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctc 408  Q
    |||| |||| ||||  |||  |||||| |||| |||| ||||||| ||||||||||||||||||||||||||| ||| ||| ||||||| ||||||||||    
T  22610325 acccctttttagaatcatacaactcattattagagaaagttagtcccacccttaccttagattggttgaattcggaccctacaagcttgttcctcttctc 22610226  T
Q  409 ttctctgacttctcactttctccccttttctcccaaaaacagtttctacgtatt-------ctgactttctaatttgttgtaaccctaattctctaatgg 501  Q
    |||||||||||||||||||||||| ||||||||||||| | |||||||||||||       |||||| |||| | |||||||||||||||||||||||||    
T  22610225 ttctctgacttctcactttctccctttttctcccaaaagcggtttctacgtattctgtatcctgactctctattctgttgtaaccctaattctctaatgg 22610126  T
Q  502 tctcatctatttataatcactatctgagtttgtttttcacttaatct 548  Q
    |||||||||||||||||||||| || |  |||||| |||||||||||    
T  22610125 tctcatctatttataatcactaactaa--ttgtttctcacttaatct 22610081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 10 - 550
Target Start/End: Original strand, 23883864 - 23884386
Alignment:
Q  10 gcgagtagaacactcaccngttgcgagttgatatcgaagtcactcgcaaggcgaacaagatcacccgccgtggtgagcgatgacaaacagttctacggga 109  Q
    |||||||||||||||||| |||||||||||| ||||| ||||||||  ||| |||||||||||| |||||||| ||||||||||| ||||||||||||||    
T  23883864 gcgagtagaacactcacc-gttgcgagttgacatcgaggtcactcgtgaggagaacaagatcactcgccgtggcgagcgatgacagacagttctacggga 23883962  T
Q  110 agaaatctattttttc-ccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcatt 208  Q
    | ||| || |||||   ||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23883963 aaaaacctgtttttcagccaaaaacccaatttgcaaccacccaaatcgcaaattcaaaaggaaactcaacctatgtttattctacaatctgaacttcatt 23884062  T
Q  209 ccttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaacta--ttaacaactacaagct 306  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||    || ||| ||| | |    
T  23884063 ccttacgttaattcaatgatttacctactctttcaacaatcaattgtgtaatttaaccctaatttctataacatcaaaactaacaaaagaacaacatg-t 23884161  T
Q  307 taaaccctttttcagaactata-tactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctctt 405  Q
    ||||||| |||| ||||  |||  || |||  ||| |||| | ||||| | ||||||||||||||| | ||||||||||||||| ||| |||||||||||    
T  23884162 taaacccctttttagaatcatacaacccat--ttagagaaagctagtcccgcccttaccttagattagatgaattcagactctacaagtttgctcctctt 23884259  T
Q  406 ctcttctctgacttctcactttctccccttttctcccaaaaacagtttctacgtattctgactttctaatttgttgtaaccctaattctctaatggtctc 505  Q
    |||||||||||||| ||||||||| |||||||||||||||| |||                 ||||||||||||||||||||||||||||||||||||||    
T  23884260 ctcttctctgacttttcactttct-cccttttctcccaaaagcag-----------------tttctaatttgttgtaaccctaattctctaatggtctc 23884341  T
Q  506 atctatttataatcactatctgagtttgtttttcacttaatctct 550  Q
     ||||||||||||||||| |||||||||||| |||||||||||||    
T  23884342 gtctatttataatcactaactgagtttgtttctcacttaatctct 23884386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 129 - 465
Target Start/End: Original strand, 20879287 - 20879622
Alignment:
Q  129 aaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatgaa 228  Q
    ||||||| | ||||||||||| | || |||||||  | |||||||   ||||||  ||||||||||| |||||| ||| | |||| ||||||||| || |    
T  20879287 aaaaccccaatttcaaccaccaacatcccaaatttgacaggaaacattacctattgttattctacaacctgaacatcaattcttatgttaattcattgga 20879386  T
Q  229 ttacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata 328  Q
    |||||||| |||| |||||||||||| |||||||||| |||| || |||||||||||||| ||||| ||||||||||||||||||||||| ||||| |||    
T  20879387 ttacctacacttttaacaatcaattt-gcaatttaacactaacttttataacatcaaaaccattaataactacaagcttaaacccttttttagaaccata 20879485  T
Q  329 tactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctcttctctgacttctcactttc 428  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||    
T  20879486 tacttatgattaaagaaggttagtcccacccttaccttagattggttgaattcggactctacaagtttgctcctcttctcttctctgacttctcactttc 20879585  T
Q  429 tccccttttctcccaaaaacagtttctacgtattctg 465  Q
    |||| |||||||||||||  |||||||||||||||||    
T  20879586 tccctttttctcccaaaagtagtttctacgtattctg 20879622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 263 - 601
Target Start/End: Complemental strand, 20517140 - 20516798
Alignment:
Q  263 aaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcaccctta 362  Q
    |||||||| |||| |||||||| || ||| || ||| ||||  ||||||| ||||  |||| |||||||| |||||||||||||||||||| ||||||||    
T  20517140 aaccctaacttctttaacatcacaattatcaagaacaacaaaattaaaccattttctagaattatatacttatgattaaagaaggttagtcccaccctta 20517041  T
Q  363 ccttagattggttgaattcagact-ctataagcttgctc--------------ctcttctcttctctgacttctcactttctccccttttctcccaaaaa 447  Q
    ||||||||||||| || || || | ||| |||||| | |              |||||||||||||||| |||||||||||||||           ||||    
T  20517040 ccttagattggttaaactctgaattctacaagctttcccttcttctcacaaagctcttctcttctctgatttctcactttctccc-----------aaaa 20516952  T
Q  448 cagtttctacgtattctgactttctaatttgttgtaaccctaattctctaatggtctcatctatttataatcactatctgagtttgtttttcacttaatc 547  Q
    | |||| ||||| || ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||| |||||    
T  20516951 ctgtttttacgtgttttgactctctattttgttgtaaccctaattctctaatggtctcatctatttataatcaccaactgagtttgtttctcacctaatc 20516852  T
Q  548 tctttgattataaacctacataatcttccttattccaattctacccttatgcct 601  Q
    ||| | ||||||||||||||||||||||||||||||| ||||  ||||||||||    
T  20516851 tctctcattataaacctacataatcttccttattccagttctgtccttatgcct 20516798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 128 - 281
Target Start/End: Complemental strand, 36732723 - 36732570
Alignment:
Q  128 aaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatga 227  Q
    |||||||||| ||||  | |||||||| |||||||  | ||||||||  ||||||| ||||||||||||||||||||| ||||||||||||||||||||     
T  36732723 aaaaacccaaatttcgtctacccaaatcccaaatttgataggaaacttgacctatgattattctacaatctgaacctccttccttacgttaattcaatgg 36732624  T
Q  228 attacctactctttcaacaatcaattttgcaatttaaccctaatttctataaca 281  Q
     ||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  36732623 tttacctactctttcaacaatcaattttgcaaattaaccctaatttcaataaca 36732570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 216 - 550
Target Start/End: Complemental strand, 21678995 - 21678659
Alignment:
Q  216 ttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctt 315  Q
    |||||||| ||||||||||||||||||||| ||| | || |||||| || ||||||| |||||| ||||||||||| |||||||||||  |||||||||     
T  21678995 ttaattcattgaattacctactctttcaaccatccaatt-gcaattcaaacctaattgctataatatcaaaactatcaacaactacaaagttaaacccta 21678897  T
Q  316 tttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagact-ctataagcttgctcctcttctc------ 408  Q
    ||||| || |||| || ||| |||| ||||| | |||| ||||||||||||||||||||| || || || | ||| ||| || | | |||||||          
T  21678896 tttcataattataaacccattattagagaagct-agtcccacccttaccttagattggttaaactctgaattctacaagttttcccttcttctcacgaag 21678798  T
Q  409 --------ttctctgacttctcactttctccccttttctcccaaaaacagtttctacgtattctgactttctaatttgttgtaaccctaattctctaatg 500  Q
            ||||||||||||||||||||||||           ||||| ||||  |||| |||||||| |||| |||||||||||| ||||| |||||||    
T  21678797 ctcatatcttctctgacttctcactttctccc-----------aaaactgttttcacgtgttctgactctctattttgttgtaaccgtaattttctaatg 21678709  T
Q  501 gtctcatctatttataatcactatctgagtttgtttttcacttaatctct 550  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  21678708 gtctcatctatttataatcactaactgagtttgtttctcacttaatctct 21678659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 228 - 408
Target Start/End: Complemental strand, 21579345 - 21579167
Alignment:
Q  228 attacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaacta 326  Q
    |||| |||||||||| ||||||||||||    |  |||||||||| ||| ||||||||||| |||||||||||||||| |||||||||||||||| | ||    
T  21579345 attatctactctttctacaatcaattttagtttcgaaccctaatt-ctacaacatcaaaacatattaacaactacaaggttaaaccctttttcaggatta 21579247  T
Q  327 tatactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctc 408  Q
     ||||| |||||||||||||||||||| ||||||||||||| ||| | |||  || ||||||| ||| ||||||||||||||    
T  21579246 catacttatgattaaagaaggttagtcacacccttaccttaaattagatga--tcggactctacaagattgctcctcttctc 21579167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 228 - 377
Target Start/End: Original strand, 22474669 - 22474818
Alignment:
Q  228 attacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaacta 326  Q
    |||| |||||||||| ||||||||||||    |  |||||||||| ||| ||||||||||| |||||||||||||||| |||||||||||||||| | ||    
T  22474669 attatctactctttcgacaatcaattttagtttcaaaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 22474767  T
Q  327 tatactcatgattaaagaaggttagtctcacccttaccttagattggttga 377  Q
     ||||| |||||||||||||||||||| |||||||||||||||||| ||||    
T  22474768 catacttatgattaaagaaggttagtcccacccttaccttagattgattga 22474818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 306 - 447
Target Start/End: Original strand, 22483928 - 22484068
Alignment:
Q  306 ttaaaccctttttcagaactatata-ctcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctct 404  Q
    ||||||||||||| |||| |||| | ||||| |||| |||| ||||||| | | ||||||||||||||||||||||| ||||||| ||||||||||||||    
T  22483928 ttaaaccctttttaagaattatacaactcattattagagaaagttagtccc-cgcttaccttagattggttgaattcggactcta-aagcttgctcctct 22484025  T
Q  405 tctc-ttctctgacttctcactttctccccttttctcccaaaaa 447  Q
    |||| ||||||||||||||||||||| |||||||||||||||||    
T  22484026 tctctttctctgacttctcactttct-cccttttctcccaaaaa 22484068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 263 - 453
Target Start/End: Original strand, 22208216 - 22208405
Alignment:
Q  263 aaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcaccct 360  Q
    |||||||||| ||| ||||||||||| |||||||||||||||| |||||||||||||||||| ||||  || ||| |||| |||| | ||||| ||||||    
T  22208216 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccaccct 22208314  T
Q  361 taccttagattggttgaattcagactctataagcttgctcctcttctc-ttctctgacttctcactttctccccttttctcccaaaaacagttt 453  Q
    ||||||||||| | |||  || | |||||  || |||||||||||||| |||| |||||||||||||||| |||||||||||||||| ||||||    
T  22208315 taccttagattagatga--tcggtctctaccagattgctcctcttctctttctttgacttctcactttct-cccttttctcccaaaagcagttt 22208405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 461 - 550
Target Start/End: Complemental strand, 21676402 - 21676313
Alignment:
Q  461 ttctgactttctaatttgttgtaaccctaattctctaatggtctcatctatttataatcactatctgagtttgtttttcacttaatctct 550  Q
    |||||||| |||| |||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||| |||||||||||||    
T  21676402 ttctgactctctattttgttgtaaccctaattctctaatggtttcatctacttataatcactaactgagtttgtttctcacttaatctct 21676313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 272 - 408
Target Start/End: Complemental strand, 29762964 - 29762829
Alignment:
Q  272 ttctataacatcaaaact-attaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagat 370  Q
    ||||| |||||||||||| ||||||||||||||| |||||||||||||||| | || ||||| ||||||||||||||||||| |||||||||||||| ||    
T  29762964 ttctacaacatcaaaacttattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtttcacccttaccttaaat 29762865  T
Q  371 tggttgaattcagactctataagcttgctcctcttctc 408  Q
    | | |||  || ||||||| ||| |||||| |||||||    
T  29762864 tagatga--tcggactctacaagattgctcttcttctc 29762829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 209 - 446
Target Start/End: Original strand, 36305898 - 36306140
Alignment:
Q  209 ccttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactattaacaactacaagctta 308  Q
    ||||||||||||||||||  ||||||||||||||||||||||| ||||||| |||||||||||||||||||   ||||||    |||||| || |  |||    
T  36305898 ccttacgttaattcaatggtttacctactctttcaacaatcaactttgcaaattaaccctaatttctataa---caaaac----aacaacaaccatttta 36305990  T
Q  309 aaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcc------- 401  Q
    || ||||||||||||  ||| |  | | |||| |||| | ||||||||||||||||||||||| | |||  || ||||||| ||| |||||||           
T  36305991 aaacctttttcagaatcatacaaccgttattagagaaagctagtctcacccttaccttagattagatga--tcggactctacaagattgctcctcttctc 36306088  T
Q  402 -------tcttctcttctctgacttctcactttctccccttttctcccaaaa 446  Q
           ||||||||||||||||||||||||||||||| |||||||||||||    
T  36306089 acaagattcttctcttctctgacttctcactttctccctttttctcccaaaa 36306140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 210 - 320
Target Start/End: Original strand, 22966706 - 22966815
Alignment:
Q  210 cttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaa-ctattaacaactacaagctta 308  Q
    |||||||||||||||||| |||||||||||||||||||| || ||  |||| ||||||||||  || ||||||||||| ||||||||||||||||| |||    
T  22966706 cttacgttaattcaatgatttacctactctttcaacaattaaatt--caatataaccctaatcgctttaacatcaaaacctattaacaactacaaggtta 22966803  T
Q  309 aaccctttttca 320  Q
    ||||||||||||    
T  22966804 aaccctttttca 22966815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 272 - 409
Target Start/End: Complemental strand, 12037260 - 12037124
Alignment:
Q  272 ttctataacatcaaaa-ctattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagat 370  Q
    ||||| |||||||||| ||||||||||||||||| |||||||||||||||| | || ||||| ||||||||| |||||||||| ||||||||||||| ||    
T  12037260 ttctacaacatcaaaagctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaacaaggttagtcccacccttaccttatat 12037161  T
Q  371 tggttgaattcagactctataagcttgctcctcttctct 409  Q
    | | |||  || |||||||  || |||||||||||||||    
T  12037160 tagatga--tcggactctacgagattgctcctcttctct 12037124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 349 - 447
Target Start/End: Original strand, 22345198 - 22345296
Alignment:
Q  349 tagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctc-ttctctgacttctcactttctccccttttctcccaaaaa 447  Q
    ||||| ||||||||||||||||| | ||| | ||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  22345198 tagtcccacccttaccttagattagatgattacagactctacaagcttgctcctcttctctttctctgacttctcactttct-cccttttctcccaaaaa 22345296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 349 - 447
Target Start/End: Original strand, 22356858 - 22356956
Alignment:
Q  349 tagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctc-ttctctgacttctcactttctccccttttctcccaaaaa 447  Q
    ||||| ||||||||||||||||| | ||| | ||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  22356858 tagtcccacccttaccttagattagatgattacagactctacaagcttgctcctcttctctttctctgacttctcactttct-cccttttctcccaaaaa 22356956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 185 - 370
Target Start/End: Complemental strand, 21676773 - 21676590
Alignment:
Q  185 ttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatca 284  Q
    ||||||||||| |||||| ||| |  |||  |||||||| || ||||||||||||||||||  || | || | ||||||| |||||||||||||| ||||    
T  21676773 ttattctacaacctgaacatcaatttttatattaattcattggattacctactctttcaaccttccaatt-gaaatttaaacctaatttctataatatca 21676675  T
Q  285 aaactattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagat 370  Q
    ||||||| |||||||||||  ||||||||| ||||| || |||| || ||| |||| |||| | ||||| ||||||||||||||||    
T  21676674 aaactatcaacaactacaaagttaaaccctatttcataattataaacccattattagagaa-gctagtcccacccttaccttagat 21676590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 262 - 368
Target Start/End: Complemental strand, 4380723 - 4380616
Alignment:
Q  262 taaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcaccct 360  Q
    |||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||| ||||  ||| |  |||| |||| ||||||| ||||||    
T  4380723 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccaccct 4380624  T
Q  361 taccttag 368  Q
    ||||||||    
T  4380623 taccttag 4380616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 126 - 253
Target Start/End: Original strand, 16198647 - 16198773
Alignment:
Q  126 ccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaat 225  Q
    |||||| ||| | ||||| | |||||||| |||||||  | ||||||||||||||||||||||||||||  |||||| ||| | |||| ||||||||| |    
T  16198647 ccaaaagccccaatttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcatt 16198746  T
Q  226 gaattacctactctttcaacaatcaatt 253  Q
    |||||||||||||||| |||||||||||    
T  16198747 gaattacctactcttt-aacaatcaatt 16198773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 156 - 255
Target Start/End: Original strand, 22483621 - 22483720
Alignment:
Q  156 ccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaatttt 255  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||| ||| | |||| |||||||||    ||||||||||||||||||||| ||||||    
T  22483621 ccaaattcaataggaaactcaacctatgtttattctacaacctgaacatcaattcttatgttaattcatcagattacctactctttcaacaataaatttt 22483720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 147 - 254
Target Start/End: Complemental strand, 25657734 - 25657628
Alignment:
Q  147 acccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaaca 246  Q
    |||||||| |||||||  | ||||||||||||||||||||||||||||  |||||| ||| | |||| ||||||||| ||||||||||||||||| ||||    
T  25657734 acccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacatcaattcttatgttaattcattgaattacctactcttt-aaca 25657636  T
Q  247 atcaattt 254  Q
    ||||||||    
T  25657635 atcaattt 25657628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 210 - 318
Target Start/End: Complemental strand, 21697616 - 21697509
Alignment:
Q  210 cttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaa-ctattaacaactacaagctta 308  Q
    |||||||||||||||||  |||||||||||||||||||| || ||  |||| |||||||||| ||| ||||||||||| ||||||||||||||||  |||    
T  21697616 cttacgttaattcaatggtttacctactctttcaacaattaaatt--caatataaccctaatctctttaacatcaaaacctattaacaactacaatgtta 21697519  T
Q  309 aacccttttt 318  Q
    ||||||||||    
T  21697518 aacccttttt 21697509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 263 - 368
Target Start/End: Complemental strand, 41680237 - 41680132
Alignment:
Q  263 aaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcaccctt 361  Q
    |||||||||| ||| ||||||||||| |||||||||||||||| ||||||||||| |||| | || ||||| |||||||||||||||||||| |||| ||    
T  41680237 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttatcaggattacatacttatgattaaagaaggttagtcccaccttt 41680139  T
Q  362 accttag 368  Q
    |||||||    
T  41680138 accttag 41680132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 262 - 372
Target Start/End: Complemental strand, 18816401 - 18816290
Alignment:
Q  262 taaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcaccct 360  Q
    |||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||| ||||  || |||  ||| |||| | ||||| ||||||    
T  18816401 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccatttttagagaaagctagtcccaccct 18816302  T
Q  361 taccttagattg 372  Q
    ||||||| ||||    
T  18816301 taccttatattg 18816290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 263 - 368
Target Start/End: Complemental strand, 17978520 - 17978415
Alignment:
Q  263 aaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcaccctt 361  Q
    |||||||||| ||| ||||||||||| |||||||||||||||| ||||| |||||||||| | || ||||| ||||||| ||||| |||||| |||||||    
T  17978520 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaatcctttttcaggattacatacttatgattatagaagtttagtcccaccctt 17978422  T
Q  362 accttag 368  Q
    |||||||    
T  17978421 accttag 17978415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 262 - 367
Target Start/End: Original strand, 21514637 - 21514743
Alignment:
Q  262 taaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcaccct 360  Q
    |||||||||||||||||||||||||||||  |||||||||||| ||||||||||||| |||| ||||  |||||| |||| ||||   ||||| ||||||    
T  21514637 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttaagaattatacaactcattattagagaaatctagtcccaccct 21514736  T
Q  361 tacctta 367  Q
    |||||||    
T  21514737 tacctta 21514743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 23478934 - 23479016
Alignment:
Q  167 aggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatca 250  Q
    ||||||||||||||||||||||||||||  |||||| ||| | |||| ||||||||| ||||||||||||||||| ||||||||    
T  23478934 aggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctactcttt-aacaatca 23479016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 279 - 377
Target Start/End: Complemental strand, 36405221 - 36405122
Alignment:
Q  279 acatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagattggttga 377  Q
    |||||||||| |||||||||||||||| ||||||||||||   | | || ||||| |||||||||||| ||||||| |||||||||||||||||| ||||    
T  36405221 acatcaaaacctattaacaactacaaggttaaacccttttcagggattacatacttatgattaaagaaagttagtcacacccttaccttagattgattga 36405122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 167 - 253
Target Start/End: Original strand, 19880675 - 19880760
Alignment:
Q  167 aggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaatt 253  Q
    ||||||||||||||||||||||||||||  |||||| ||| | |||| ||||||||| | ||||||||||||||| |||||||||||    
T  19880675 aggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcatttaattacctactcttt-aacaatcaatt 19880760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 167 - 253
Target Start/End: Original strand, 26454558 - 26454643
Alignment:
Q  167 aggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaatt 253  Q
    ||||||||||||||||||||||||||||  |||||| | | | |||| ||||||||| ||||||||||||||||| |||||||||||    
T  26454558 aggaaactcaacctatgtttattctacagcctgaactttaattcttatgttaattcattgaattacctactcttt-aacaatcaatt 26454643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 247 - 290
Target Start/End: Original strand, 18834356 - 18834399
Alignment:
Q  247 atcaattttgcaatttaaccctaatttctataacatcaaaacta 290  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  18834356 atcaattttgcaatttaaccctaatttctataacatcaaaacta 18834399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 247 - 290
Target Start/End: Original strand, 21399647 - 21399690
Alignment:
Q  247 atcaattttgcaatttaaccctaatttctataacatcaaaacta 290  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  21399647 atcaattttgcaatttaaccctaatttctataacatcaaaacta 21399690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 247 - 290
Target Start/End: Original strand, 21794140 - 21794183
Alignment:
Q  247 atcaattttgcaatttaaccctaatttctataacatcaaaacta 290  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  21794140 atcaattttgcaatttaaccctaatttctataacatcaaaacta 21794183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 266 - 368
Target Start/End: Complemental strand, 36732514 - 36732411
Alignment:
Q  266 cctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcacccttacc 364  Q
    ||||||| |||||||||||||||||  |||||||||||| |||||| ||||||||||| ||||  || ||| |||| |||| | ||||| ||||||||||    
T  36732514 cctaattcctataacatcaaaactaacaacaactacaaggttaaactctttttcagaattatacaacccattattagagaaagctagtcacacccttacc 36732415  T
Q  365 ttag 368  Q
    ||||    
T  36732414 ttag 36732411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 216 - 378
Target Start/End: Complemental strand, 22708476 - 22708313
Alignment:
Q  216 ttaattcaatgaattacctactctttcaacaatcaattttgcaatttaa--ccctaatttctataacatcaaaactattaacaactacaagcttaaaccc 313  Q
    |||||||| || ||||| ||| ||||||| |||||| || |||||||||  |||||| |||| |||||||| || ||| ||||||  |||  |||  |||    
T  22708476 ttaattcattgtattacttacactttcaagaatcaaatt-gcaatttaaaaccctaacttctttaacatcacaattatcaacaacatcaaagttagcccc 22708378  T
Q  314 tttttcagaactatata-ctcatgattaaagaaggttagtctcacccttaccttagattggttgaa 378  Q
    ||||| |||| |||| | ||||| ||||||||||||||||| ||||||||||||||||||| ||||    
T  22708377 ttttttagaattatagaactcat-attaaagaaggttagtcccacccttaccttagattggatgaa 22708313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 263 - 368
Target Start/End: Original strand, 12577826 - 12577932
Alignment:
Q  263 aaccctaatttctataacatcaaaactattaacaacta-caagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcaccctt 361  Q
    ||||||||| ||||||||||||||||||  ||||||||  ||| |||||||||||||| ||| |||| |   || |||| |||| ||||||| |||||||    
T  12577826 aaccctaatctctataacatcaaaactaacaacaactataaaggttaaaccctttttcggaattatacaactattattagagaaagttagtcccaccctt 12577925  T
Q  362 accttag 368  Q
    |||||||    
T  12577926 accttag 12577932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 401 - 453
Target Start/End: Complemental strand, 17611262 - 17611210
Alignment:
Q  401 ctcttctcttctctgacttctcactttctccccttttctcccaaaaacagttt 453  Q
    |||||||||||||| |||||||||||| |||| ||||||||||||| ||||||    
T  17611262 ctcttctcttctcttacttctcactttttccctttttctcccaaaagcagttt 17611210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 281 - 373
Target Start/End: Complemental strand, 21676585 - 21676494
Alignment:
Q  281 atcaaaactattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagattgg 373  Q
    ||||||||||| |||||||||||  ||||||||| ||||| || |||| || ||| |||| |||| | ||||| |||||||||||||||||||    
T  21676585 atcaaaactatcaacaactacaaagttaaaccctatttcataattataaacccattattagagaa-gctagtcccacccttaccttagattgg 21676494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 8413989 - 8413912
Alignment:
Q  126 ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 202  Q
    |||||||||||||||| || |||||||||  |||||||  | |||||||| |||||||| ||||||||||| ||||||    
T  8413989 ccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaac 8413912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 272 - 367
Target Start/End: Complemental strand, 22258403 - 22258306
Alignment:
Q  272 ttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatata-ctcatgattaaagaaggttagtctcacccttacctta 367  Q
    ||||| ||||||||||| ||| ||||||| |||| |||||||||||||  ||| |||| | ||||| |||| |||| | |||||||||||||||||||    
T  22258403 ttctacaacatcaaaacctatcaacaactgcaaggttaaacccttttttggaattatacaactcattattagagaaagctagtctcacccttacctta 22258306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 432
Target Start/End: Complemental strand, 21676451 - 21676420
Alignment:
Q  401 ctcttctcttctctgacttctcactttctccc 432  Q
    ||||||||||||||||||||||||||||||||    
T  21676451 ctcttctcttctctgacttctcactttctccc 21676420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 19882759 - 19882836
Alignment:
Q  126 ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 202  Q
    ||||||| |||||||| || |||||||||  |||||||  | |||||||| |||||||| ||||||||||| ||||||    
T  19882759 ccaaaaagccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaac 19882836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 14397149 - 14397082
Alignment:
Q  126 ccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctaca 194  Q
    |||||| ||| | ||||| | |||||||| |||||||  | ||||||||||||||||||||||||||||    
T  14397149 ccaaaagccccaatttcatcaacccaaat-ccaaatttgataggaaactcaacctatgtttattctaca 14397082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 15202358 - 15202302
Alignment:
Q  315 ttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagatt 371  Q
    |||||||||  ||| ||||| |||||  ||| |||||||||||||||||||||||||    
T  15202358 ttttcagaatcatagactcaagattattgaatgttagtctcacccttaccttagatt 15202302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 453
Target Start/End: Original strand, 18834521 - 18834573
Alignment:
Q  402 tcttctcttctct-gacttctcactttctccccttttctcccaaaaacagttt 453  Q
    |||||| |||||| ||||| |||||||||||| ||||||||||||| ||||||    
T  18834521 tcttcttttctcttgacttatcactttctccctttttctcccaaaagcagttt 18834573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 315 - 367
Target Start/End: Original strand, 20463195 - 20463247
Alignment:
Q  315 ttttcagaactatatactcatgattaaagaaggttagtctcacccttacctta 367  Q
    |||||||||  |||||||||  ||||  |||||||||||||||||||||||||    
T  20463195 ttttcagaatcatatactcagaattattgaaggttagtctcacccttacctta 20463247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 409 - 453
Target Start/End: Original strand, 39834655 - 39834699
Alignment:
Q  409 ttctctgacttctcactttctccccttttctcccaaaaacagttt 453  Q
    ||||||||||||||| |||||||  ||||||||||||| ||||||    
T  39834655 ttctctgacttctcattttctccttttttctcccaaaagcagttt 39834699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 263; Significance: 1e-146; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 10 - 550
Target Start/End: Complemental strand, 36300997 - 36300458
Alignment:
Q  10 gcgagtagaacactcaccngttgcgagttgatatcgaagtcactcgcaaggcgaacaagatcacccgccgtggtgagcgatgacaaacagttctacggga 109  Q
    |||||||||||||||  | |||||||||||| ||||||||||||||  ||| |||||||||||| |||||| | |||| |||||| ||||||||||||||    
T  36300997 gcgagtagaacactcgtc-gttgcgagttgacatcgaagtcactcgtgaggtgaacaagatcactcgccgtagcgagcaatgacagacagttctacggga 36300899  T
Q  110 agaaatctattttttcccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaat-ctgaacctcatt 208  Q
    |||||  | ||||   ||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  36300898 agaaacttgttttcagccaaaaacccaattttcaatcacccaaatcctaaattcaaaaggaaactcaacctatgtttattctacaattctgaacctcact 36300799  T
Q  209 ccttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactattaacaactacaagctta 308  Q
    |||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||| ||||| |||||||||||  || ||  ||| | |||    
T  36300798 ccttacgttaattcaatggattacctactctttcaacagttaattttgcaatttaaccctaattcctatatcatcaaaactaacaa-aataacatg-tta 36300701  T
Q  309 aaccctttttcagaactata-tactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttct 407  Q
    ||||| |||| ||||  |||  || ||| |||| |||| | |||||||||| ||||||||||||| |||||||| || |||| ||| |||||||||||||    
T  36300700 aacccctttttagaatcatacaacccattattagagaaagctagtctcacctttaccttagattgattgaattcggattctacaagtttgctcctcttct 36300601  T
Q  408 cttctctgacttctcactttctccccttttctcccaaaaacagtttctacgtattctgactttctaatttgttgtaaccctaattctctaatggtctcat 507  Q
    ||||||||||||||||||||||| | || ||  |||||| ||||||||||||||| ||  | |||| |||||||||||||||||||||||||||||||||    
T  36300600 cttctctgacttctcactttctcactttctccaccaaaagcagtttctacgtattatgtatctctattttgttgtaaccctaattctctaatggtctcat 36300501  T
Q  508 ctatttataatcactatctgagtttgtttttcacttaatctct 550  Q
    |||||||||||||||| |||||||||||| |||||||||||||    
T  36300500 ctatttataatcactaactgagtttgtttctcacttaatctct 36300458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 10 - 432
Target Start/End: Complemental strand, 8931124 - 8930700
Alignment:
Q  10 gcgagtagaacactcaccngttgcgagttgatatcgaagtcactcgcaaggcgaacaagatcacccgccgtggtgagcgatgacaaacagttctacggga 109  Q
    |||||||||||||||  | |||||||||||| ||||||||||||||| |||||||||||||||| |||||||| ||| || |||| ||||||||||||||    
T  8931124 gcgagtagaacactcgtc-gttgcgagttgacatcgaagtcactcgcgaggcgaacaagatcactcgccgtggcgagtgacgacagacagttctacggga 8931026  T
Q  110 agaaatctattttttcccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcatt 208  Q
    |||||  | ||||   |||||||| ||||||| |||||||||||||  ||||||||||| ||||||||||||||||||||| ||||||||||| ||||||    
T  8931025 agaaacatgttttcagccaaaaactcaatttttcaaccacccaaatctcaaattcaaaaagaaactcaacctatgtttattatacaatctgaagctcatt 8930926  T
Q  209 ccttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaacta--ttaacaactacaagct 306  Q
    |||| |||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    |||||| ||| | |    
T  8930925 cctttcgttaattcaatggtttacctactctttcaacaatcaattttgcaaattaaccctaatttctataacatcaaaactaacaaaacaacaacatg-t 8930827  T
Q  307 taaaccctttttcagaactata-tactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctctt 405  Q
    ||||||| |||| ||||  |||  || ||| |||| ||||   ||||| ||||||||||||||||| | ||| | | ||| ||| |||||||||||||||    
T  8930826 taaacccctttttagaatcatacaacccattattagagaaatgtagtcccacccttaccttagattagatgattccggacgcta-aagcttgctcctctt 8930728  T
Q  406 ctc-ttctctgacttctcactttctccc 432  Q
    ||| |||| |||||||||||||||||||    
T  8930727 ctctttctttgacttctcactttctccc 8930700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 306 - 606
Target Start/End: Original strand, 38299738 - 38300039
Alignment:
Q  306 ttaaaccctttttcagaactatata-ctcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctct 404  Q
    |||||||||||||||||| |||| | | ||| |||| |||| | ||||| ||||||||||||||||| | ||| ||||||||||| ||||||||||||||    
T  38299738 ttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttaccttagattagatgatttcagactctacaagcttgctcctct 38299837  T
Q  405 tctcttctctgacttctcactttctccccttttctcccaaaaacagtttctacgtattctgactttctaatttgttgtaaccctaattctctaatggtct 504  Q
    |||||||||||||||||||||||||||| |||||||||||||   ||||||||||||| || || |||| ||||||||||||||||||||||||||||||    
T  38299838 tctcttctctgacttctcactttctccctttttctcccaaaagtcgtttctacgtattatggctctctattttgttgtaaccctaattctctaatggtct 38299937  T
Q  505 catctatttataatcactatctgagtttgtttttcacttaatctctttgattataaacctacataatcttccttattccaattctacccttatgcctaat 604  Q
    |||||||||||||||||||  | ||||||||| ||||||||||||| | ||||||||||| |||||||||||||||| ||||||| ||||||||||| ||    
T  38299938 catctatttataatcactaattaagtttgtttctcacttaatctctctcattataaacctgcataatcttccttatttcaattctgcccttatgcctcat 38300037  T
Q  605 ta 606  Q
    ||    
T  38300038 ta 38300039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 62 - 447
Target Start/End: Original strand, 18570392 - 18570778
Alignment:
Q  62 gaacaagatcacccgccgtggtgagcgatgacaaacagttctacgggaagaaatctattttttcccaaaaacccaattttcaaccacccaaattccaaat 161  Q
    |||||||| ||| |||||| | || || ||||| |||| |||||||||||||| || ||||   ||||||||||||||||||||||||||||| ||||||    
T  18570392 gaacaagaacactcgccgtagcgaacgctgacagacagctctacgggaagaaacctgttttcagccaaaaacccaattttcaaccacccaaatcccaaat 18570491  T
Q  162 tcaaaaggaaactcaacctatgtttattctacaa-tctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaattttgcaat 260  Q
    |||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| | |||     
T  18570492 tcaagaggaaattcaacctatgtttattctacaattctgaacctcattccttacgttaattcaatg-gttacctactctttcaacaatcaattctacaaa 18570590  T
Q  261 ttaaccctaatttctataacatcaaaactattaacaactaca--agcttaaaccctttttcagaa-ctatatactcatgattaaagaaggttagtctcac 357  Q
    |||||| ||| |||||||||||||||||||  || ||| |||  |  |||||||| |||  |||| ||    || ||| |||| |||| | |||||||||    
T  18570591 ttaaccataacttctataacatcaaaactaacaa-aacaacaatatgttaaacccctttctagaatcttacaacccattattagagaaagctagtctcac 18570689  T
Q  358 ccttaccttagattggttgaattcagactctataagcttgctcctcttctc-ttctctgacttctcactttctccccttttctcccaaaaa 447  Q
    |||||||||||||||||||||||| ||||||| |||||||| ||||||||| |||||| ||||||||||||| |||||||||| |||||||    
T  18570690 ccttaccttagattggttgaattcggactcta-aagcttgcccctcttctctttctctaacttctcactttc-ccccttttcttccaaaaa 18570778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 10 - 255
Target Start/End: Original strand, 38295298 - 38295542
Alignment:
Q  10 gcgagtagaacactcaccngttgcgagttgatatcgaagtcactcgcaaggcgaacaagatcacccgccgtggtgagcgatgacaaacagttctacggga 109  Q
    ||||||||||||||| || |||||||||||| ||||||||||||||| |||||||||||||| | || ||||| ||||||||||| |||||||||||||     
T  38295298 gcgagtagaacactcgcc-gttgcgagttgacatcgaagtcactcgcgaggcgaacaagatccctcgtcgtggggagcgatgacacacagttctacgggg 38295396  T
Q  110 agaaatctattttttcccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattc 209  Q
    ||||   | ||||   ||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||| ||||||||||  ||||||  || |     
T  38295397 agaatcttgttttcagccaaaaacccaattttcaaccacccaaatcccaaattcaataggaaactctacctatgattattctacatcctgaacaccaatt 38295496  T
Q  210 cttacgttaattcaatgaattacctactctttcaacaatcaatttt 255  Q
     |||| ||| ||||  | ||||||||||||| ||||||||||||||    
T  38295497 attaccttacttcatcggattacctactcttgcaacaatcaatttt 38295542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 130 - 381
Target Start/End: Complemental strand, 42566069 - 42565819
Alignment:
Q  130 aaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatgaat 229  Q
    |||||| | ||||||| ||||||||| ||||||  | |||||||   ||||||  ||||||||||| |||||| ||| |   || ||||||||| || ||    
T  42566069 aaaccccagtttcaactacccaaatttcaaatttgataggaaacattacctattgttattctacaacctgaacatcaatttctatgttaattcattggat 42565970  T
Q  230 tacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactatat 329  Q
    ||| ||| |||||||||||||| ||| |||||||| ||||| |||||||||| ||||| ||| |||||||||||| |||||||||||||||||| |||||    
T  42565969 tacgtacactttcaacaatcaaattt-caatttaaacctaacttctataacaacaaaattatcaacaactacaagattaaaccctttttcagaattatat 42565871  T
Q  330 actcatgattaaagaaggttagtctcacccttaccttagattggttgaattc 381  Q
    | | ||||||||||||| |||||||||||||||||||||||||||| |||||    
T  42565870 atttatgattaaagaagattagtctcacccttaccttagattggttaaattc 42565819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 84 - 286
Target Start/End: Complemental strand, 33556379 - 33556187
Alignment:
Q  84 gagcgatgacaaacagttctacgggaagaaatctattttttcccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatg 183  Q
    ||||||||||| ||| ||||||||||||||| || ||||   |||||||||||||||| ||||||||||||||       ||||||||||||||||||||    
T  33556379 gagcgatgacagacaattctacgggaagaaacctgttttcagccaaaaacccaattttgaaccacccaaattc-------aaaaggaaactcaacctatg 33556287  T
Q  184 tttattctacaatctgaacctcattccttacgttaattcaat-gaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacat 282  Q
    ||||   | | ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  33556286 ttta---tcccatctgaacctcattccttacgttaattcaatggatttacctactctttcaacaatcaatttttcaa-ttaaccctaatttctataacat 33556191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 209 - 447
Target Start/End: Complemental strand, 15700892 - 15700656
Alignment:
Q  209 ccttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactattaacaactacaagctta 308  Q
    |||||||||||||||||   ||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||  |||||||||| | |||    
T  15700892 ccttacgttaattcaatagtttacctactctttcaacaaccaattttgcaatt-aaccctaatttctataacattaaaactaacaacaactacatg-tta 15700795  T
Q  309 aaccctttttcagaactatata-ctcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttct 407  Q
    ||||| |||| ||||| ||| | | ||| |||| |||| | |||| ||| ||||||||||||||   ||| | | ||||||| || ||||||||||||||    
T  15700794 aacccctttttagaaccatacaacccattattagagaaagctagtatcatccttaccttagattatatgattactgactctacaatcttgctcctcttct 15700695  T
Q  408 cttctctgacttctcactttctccccttttctcccaaaaa 447  Q
    ||||||| |||||||||||||| |||||||||||||||||    
T  15700694 cttctctaacttctcactttct-cccttttctcccaaaaa 15700656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 84 - 381
Target Start/End: Original strand, 33060208 - 33060504
Alignment:
Q  84 gagcgatgacaaacagttctacgggaagaaatctattttttcccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatg 183  Q
    ||||||||||||| || |||| ||| ||||||| |||||   |||||||||| | || |||| |||||||| |||||||| | | |||||   ||||||     
T  33060208 gagcgatgacaaatagctctaagggcagaaatcaattttcatccaaaaaccccaattacaactacccaaatcccaaattcgatatgaaacattacctatt 33060307  T
Q  184 tttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatc 283  Q
     ||||||||| | |||||| ||| |  |||  |||||||  || ||| ||||| |||||||||||||| || |||||| || ||||| |||||| |||||    
T  33060308 gttattctacgacctgaacatcaatttttatattaattctttggattgcctacactttcaacaatcaaatt-gcaattcaaacctaacttctattacatc 33060406  T
Q  284 aaaactattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagattggttgaattc 381  Q
    |||| ||| |||||| ||||  |||||||||||| ||||| |||| |||||||||||||||||||||||| ||||||||||||||||| ||| |||||    
T  33060407 aaaattataaacaacaacaaaattaaacccttttccagaattatagactcatgattaaagaaggttagtcccacccttaccttagatttgttcaattc 33060504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 125 - 447
Target Start/End: Original strand, 37539258 - 37539580
Alignment:
Q  125 cccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaa 224  Q
    |||||||| |||| ||||| | ||||||||||||||||  | |||||||| |||||| | ||||||||||| |||||   || |  | ||  | |||||     
T  37539258 cccaaaaatccaaatttcatctacccaaattccaaatttgataggaaacttaacctaagattattctacaacctgaataacaattttcaccatgattcat 37539357  T
Q  225 tgaattacctactctttcaacaatcaattttgcaatt-taaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaa 323  Q
    || ||||||||| |||||||||||||| || | |||| ||| |||||||||  |||||||| || | | |||||| ||||   ||||| | |||||| ||    
T  37539358 tggattacctacactttcaacaatcaaatt-gaaattctaaacctaatttcattaacatcataatt-tcaacaacaacaatggtaaactccttttcataa 37539455  T
Q  324 ctat-atactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctc-ttctctgacttct 421  Q
     ||| | ||||||||||| |||| ||||||| ||||||||| ||||||| | ||| | ||||||||| |||||||||||||||||| |||||||||||||    
T  37539456 ttatgaaactcatgattatagaatgttagtcccacccttactttagattagatgattacagactctacaagcttgctcctcttctctttctctgacttct 37539555  T
Q  422 cactttctccccttttctcccaaaaa 447  Q
    |||||||| | |||||||||||||||    
T  37539556 cactttct-ctcttttctcccaaaaa 37539580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 209 - 447
Target Start/End: Complemental strand, 13744667 - 13744430
Alignment:
Q  209 ccttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactattaacaactacaagctta 308  Q
    ||||||||||| |||||   |||||| |||||||||| ||||| ||||||| |||||||||||||||||||||| |||| ||  || ||| ||| | |||    
T  13744667 ccttacgttaaatcaatagtttaccttctctttcaacgatcaactttgcaaattaaccctaatttctataacattaaaaataacaa-aacaacatg-tta 13744570  T
Q  309 aaccctttttcagaactatata-ctcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttct 407  Q
    ||||| |||| ||||  ||| | | ||| |||| |||| | ||||| ||||||||||||||||| | ||| | ||||||||| |||||||||||||||||    
T  13744569 aacccctttttagaatcataaaacccattattagagaaagctagtcccacccttaccttagattagatgattacagactctacaagcttgctcctcttct 13744470  T
Q  408 c-ttctctgacttctcactttctccccttttctcccaaaaa 447  Q
    | |||||| |||||||| ||||| |||||||||||||||||    
T  13744469 ctttctctaacttctcaatttct-cccttttctcccaaaaa 13744430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 126 - 447
Target Start/End: Complemental strand, 13315322 - 13315002
Alignment:
Q  126 ccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaat 225  Q
    |||||||||| | ||||| | |||||||| |||||||  | || |||||| ||||||| ||||||||||| ||||||  || |  || | |||||||| |    
T  13315322 ccaaaaaccccaatttcatcaacccaaatcccaaatttgatagaaaactctacctatgattattctacaacctgaacaccaattatttccttaattcatt 13315223  T
Q  226 gaattacctactctttcaacaatcaattttgcaattt--aaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaa 323  Q
    |  |||||||||||||||||||||||||||  |||||  || ||||||||||  |  ||||||| ||  || ||| ||| | |||||||| |||||||||    
T  13315222 gggttacctactctttcaacaatcaatttt--aatttcaaaacctaatttctcaacaatcaaaattaacaa-aacaacatg-ttaaaccccttttcagaa 13315127  T
Q  324 ctatata-ctcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctc-ttctctgacttct 421  Q
      ||| | | ||| |||| |||| | ||||||||||||||||||||||| | | | ||||||||||| |||||||||||| ||||| |||||||||||||    
T  13315126 tcatacaacccattattagagaaagatagtctcacccttaccttagattagattatttcagactctacaagcttgctcctattctctttctctgacttct 13315027  T
Q  422 cactttctccccttttctcccaaaaa 447  Q
    || ||||| |||||||||||||||||    
T  13315026 cattttct-cccttttctcccaaaaa 13315002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 217 - 406
Target Start/End: Complemental strand, 14161006 - 14160819
Alignment:
Q  217 taattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctt 315  Q
    |||||||  |||||| |||||||||| ||||||||||||    |  |||||||||| ||| ||||||||||| |||||||||||||||| |||||||| |    
T  14161006 taattcatcgaattatctactctttctacaatcaattttagtttcaaaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaacccct 14160908  T
Q  316 tttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttc 406  Q
    |||||| | || ||||| |||||||||||||||||||| |||||||| |||| ||| | |||  || ||||||| ||| ||||||||||||    
T  14160907 tttcaggattacatacttatgattaaagaaggttagtcccacccttatcttaaattagatga--tcggactctacaagattgctcctcttc 14160819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 455 - 550
Target Start/End: Complemental strand, 33556014 - 33555919
Alignment:
Q  455 tacgtattctgactttctaatttgttgtaaccctaattctctaatggtctcatctatttataatcactatctgagtttgtttttcacttaatctct 550  Q
    ||||| |||||||| |||| | ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||    
T  33556014 tacgtgttctgactctctattctgttgtaactctaattctctaatggtctcatctatttataatcactaactgagtttatttctcacttaatctct 33555919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 211 - 432
Target Start/End: Original strand, 25943163 - 25943385
Alignment:
Q  211 ttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaacta-ttaacaactacaagcttaa 309  Q
    |||| |||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   |||||| | ||  ||||    
T  25943163 ttacattaattcaatggtttacctactctttcaacaatcaattttgcaa-ttaaccctaatttctataacatcaaaactacaaaacaacga-aatgttaa 25943260  T
Q  310 accctttttcagaactata-tactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctc 408  Q
    |||| |||||| ||  |||  || ||| |||| |||| | ||||| ||||||||||||| ||| | ||| | ||||||||| ||| ||| || |||||||    
T  25943261 accccttttcaaaaacatacaacccattattagagaaagctagtcccacccttaccttatattagatgattacagactctacaagtttgttcatcttctc 25943360  T
Q  409 -ttctctgacttctcactttctccc 432  Q
     || | |||||| ||||||||||||    
T  25943361 tttatttgacttttcactttctccc 25943385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 263 - 372
Target Start/End: Original strand, 14318020 - 14318129
Alignment:
Q  263 aaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcaccctt 361  Q
    |||||||||| ||| ||||||||||| ||||||||||| |||| |||||||||||||||| | || ||||| |||||||||||||||| ||| |||||||    
T  14318020 aaccctaatt-ctacaacatcaaaacctattaacaactgcaaggttaaaccctttttcaggattacatacttatgattaaagaaggtttgtcccaccctt 14318118  T
Q  362 accttagattg 372  Q
    |||||||||||    
T  14318119 accttagattg 14318129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 263 - 408
Target Start/End: Complemental strand, 15119411 - 15119268
Alignment:
Q  263 aaccctaatttctataacatcaaaa-ctattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcaccctt 361  Q
    |||||||||| ||| |||||||||| ||||||||||||||||| |||||||||||||||  | || ||||| ||||||||||||||||||||  ||||||    
T  15119411 aaccctaatt-ctacaacatcaaaatctattaacaactacaaggttaaaccctttttcaagattacatacttatgattaaagaaggttagtcctaccctt 15119313  T
Q  362 accttagattggttgaattcagactctataagcttgctcctcttctc 408  Q
    ||||||| ||  | ||  ||| |||||| ||| ||||||||||||||    
T  15119312 accttaggttaatcga--tcaaactctacaagattgctcctcttctc 15119268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 47095394 - 47095514
Alignment:
Q  258 aatttaaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaacta-tatactcatgattaaagaaggttagtctca 356  Q
    ||||||||||||||||||||||||||||| |||  |||||||||||| ||||||| |||||||||| || |  || ||| |||| |||| | ||||| ||    
T  47095394 aatttaaccctaatttctataacatcaaacctaacaacaactacaaggttaaaccatttttcagaattattcaacccattattagagaaagctagtccca 47095493  T
Q  357 cccttaccttagattggttga 377  Q
    |||||||||||||||| ||||    
T  47095494 cccttaccttagattgattga 47095514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 262 - 368
Target Start/End: Complemental strand, 4690769 - 4690662
Alignment:
Q  262 taaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcaccct 360  Q
    |||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||| ||||  ||| |  |||| |||| ||||||| |||| |    
T  4690769 taaccctaatttctataacatcaaaagtaataacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccacctt 4690670  T
Q  361 taccttag 368  Q
    ||||||||    
T  4690669 taccttag 4690662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 263 - 353
Target Start/End: Complemental strand, 9743183 - 9743093
Alignment:
Q  263 aaccctaatttctataacatcaaaact-attaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtc 353  Q
    |||||||||| ||| |||||||||||| ||||||||||||||| |||||||||||||||| | || ||||| ||||||||||||||||||||    
T  9743183 aaccctaatt-ctacaacatcaaaacttattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtc 9743093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 262 - 372
Target Start/End: Complemental strand, 15575755 - 15575644
Alignment:
Q  262 taaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcaccct 360  Q
    |||||||||||||||||||||||||||||  ||||| |||||| |||||||||||||||||| ||||  || ||| |||| |||| | ||||| |||||     
T  15575755 taaccctaatttctataacatcaaaactaacaacaagtacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccc 15575656  T
Q  361 taccttagattg 372  Q
    ||||||||||||    
T  15575655 taccttagattg 15575644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 126 - 253
Target Start/End: Complemental strand, 16550243 - 16550117
Alignment:
Q  126 ccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaat 225  Q
    |||||| ||| | ||||| | |||||||| |||||||  | || |||||||||||||||||||||||||  |||||| ||| | |||| ||||||||| |    
T  16550243 ccaaaagccccaatttcatcaacccaaatcccaaatttgatagaaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcatt 16550144  T
Q  226 gaattacctactctttcaacaatcaatt 253  Q
    |||||||||||||||| |||||||||||    
T  16550143 gaattacctactcttt-aacaatcaatt 16550117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 126 - 253
Target Start/End: Original strand, 16615419 - 16615545
Alignment:
Q  126 ccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaat 225  Q
    |||||| ||| | ||||| | |||||||| |||||||  | || |||||||||||||||||||||||||  |||||| ||| | |||| ||||||||| |    
T  16615419 ccaaaagccccaatttcatcaacccaaatcccaaatttgatagaaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcatt 16615518  T
Q  226 gaattacctactctttcaacaatcaatt 253  Q
    |||||||||||||||| |||||||||||    
T  16615519 gaattacctactcttt-aacaatcaatt 16615545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 266 - 372
Target Start/End: Complemental strand, 20252284 - 20252177
Alignment:
Q  266 cctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcacccttacc 364  Q
    ||||||||||||||||| ||||||| ||||||||||||  |||||||||||||||||| ||||  |||||| |||| |||| | |||||  |||||||||    
T  20252284 cctaatttctataacattaaaactaataacaactacaatgttaaaccctttttcagaattatacaactcattattagagaaagctagtcctacccttacc 20252185  T
Q  365 ttagattg 372  Q
    ||||||||    
T  20252184 ttagattg 20252177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 262 - 368
Target Start/End: Original strand, 43745602 - 43745709
Alignment:
Q  262 taaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcaccct 360  Q
    |||| ||||||||||||||||||||||||  |||||||||||| ||||||||||||||| || ||||  |||||| |||| |||| | ||||| ||||||    
T  43745602 taactctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcataattatacaactcattattagagaaagctagtcccaccct 43745701  T
Q  361 taccttag 368  Q
    ||||||||    
T  43745702 taccttag 43745709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 355 - 447
Target Start/End: Original strand, 16463109 - 16463201
Alignment:
Q  355 cacccttaccttagattggttgaattcagactctataagcttgctcctcttctctt-ctctgacttctcactttctccccttttctcccaaaaa 447  Q
    ||||||||||||||| | | ||| | | ||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  16463109 cacccttaccttagaatagatgattccggactcta-aagcttgctcctcttctctttctctgacttctcactttctccctttttctcccaaaaa 16463201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 266 - 453
Target Start/End: Original strand, 19195562 - 19195763
Alignment:
Q  266 cctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcacccttacc 364  Q
    ||||||| |||||||||||||||||  |||||||||||| |||||||| ||||||||| ||||  |||||| |||| |||| | ||||| ||||||||||    
T  19195562 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccc-ttttcagaattatacaactcattattagagaaagctagtcccacccttacc 19195660  T
Q  365 ttagattggttgaattcagactctataagcttgctcc----------------tcttctcttctctgacttctcactttctccccttttctcccaaaaac 448  Q
    ||||||| | |||  || ||||||| ||| ||| |||                ||||||||||||||||||||||||||||||| |||||||||||||||    
T  19195661 ttagattagatga--tcggactctacaagattgttcctcctatctcacaagattcttctcttctctgacttctcactttctccctttttctcccaaaaac 19195758  T
Q  449 agttt 453  Q
     ||||    
T  19195759 tgttt 19195763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 16186859 - 16186925
Alignment:
Q  262 taaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata 328  Q
    ||||||||||||||||||||||||||||| ||||||| | ||| |||||||||||||||||| ||||    
T  16186859 taaccctaatttctataacatcaaaactactaacaaccataaggttaaaccctttttcagaattata 16186925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 29052382 - 29052297
Alignment:
Q  167 aggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaatt 253  Q
    ||||||||||||||||||||||||||||  |||||| ||| | |||| ||||||| | ||||||||||||||||| |||||||||||    
T  29052382 aggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattaattgaattacctactcttt-aacaatcaatt 29052297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 32160400 - 32160315
Alignment:
Q  167 aggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaatt 253  Q
    ||||||||||||||||||||||||||||  |||||| ||| | |||| ||||||||| || |||||||||||||| |||||||||||    
T  32160400 aggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattggattacctactcttt-aacaatcaatt 32160315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 11303999 - 11304076
Alignment:
Q  126 ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 202  Q
    |||||||||||||||| || |||||||||  |||||||  | ||||||||||||||||||||||||||||||||||||    
T  11303999 ccaaaaacccaatttttcatccacccaaacaccaaatttgataggaaactcaacctatgtttattctacaatctgaac 11304076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 16108099 - 16108022
Alignment:
Q  126 ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 202  Q
    |||||||||||||||| || |||||||||  |||||||  | ||||||||||||||||||||||||||||||||||||    
T  16108099 ccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaac 16108022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 23664363 - 23664286
Alignment:
Q  126 ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 202  Q
    |||||||||||||||| || |||||||||  |||||||  | ||||||||||||||||||||||||||||||||||||    
T  23664363 ccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaac 23664286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 337 - 451
Target Start/End: Complemental strand, 12127193 - 12127080
Alignment:
Q  337 attaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctctt-ctctgacttctcactttctcccctt 435  Q
    |||| |||| ||||||| ||||||||||||||||| | |||  || | |||||  || |||||||||||||||| ||||||||||||||||||| || ||    
T  12127193 attagagaaagttagtcccacccttaccttagattagatga--tcggtctctacgagattgctcctcttctctttctctgacttctcactttcttccttt 12127096  T
Q  436 ttctcccaaaaacagt 451  Q
    ||||||||||| ||||    
T  12127095 ttctcccaaaagcagt 12127080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 262 - 372
Target Start/End: Complemental strand, 18874770 - 18874660
Alignment:
Q  262 taaccctaatttctataacatcaaaactattaacaactacaagcttaaaccc--tttttcagaactata-tactcatgattaaagaaggttagtctcacc 358  Q
    |||||||||||||||||||||||||||   || |||||||||| ||||||||  |||||||||| ||||  || ||| |||| |||| | ||||||||||    
T  18874770 taaccctaatttctataacatcaaaac---taccaactacaaggttaaaccccttttttcagaattatacaacccattattagagaaagctagtctcacc 18874674  T
Q  359 cttaccttagattg 372  Q
    ||||||||||||||    
T  18874673 cttaccttagattg 18874660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 266 - 372
Target Start/End: Complemental strand, 708531 - 708424
Alignment:
Q  266 cctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcacccttacc 364  Q
    ||||||| |||||||||||||||||  | |||||||||| |||||||||||||||||| ||||  || ||| |||| |||| | ||||| ||||| ||||    
T  708531 cctaattcctataacatcaaaactaacagcaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccctacc 708432  T
Q  365 ttagattg 372  Q
    ||||||||    
T  708431 ttagattg 708424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 251
Target Start/End: Complemental strand, 12754904 - 12754781
Alignment:
Q  128 aaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatga 227  Q
    |||||||||| ||||| | |||||||| |||||||  | |||||||| |||||||| ||||||||||| ||||||  || |  |||| ||||||||        
T  12754904 aaaaacccaaatttcatctacccaaatcccaaatttgataggaaacttaacctatgattattctacaacctgaacaccaattattactttaattcatcag 12754805  T
Q  228 attacctactctttcaacaatcaa 251  Q
    ||||||||||||||||||||||||    
T  12754804 attacctactctttcaacaatcaa 12754781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 29797362 - 29797439
Alignment:
Q  126 ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 202  Q
    |||||||||||||||| || |||||||||  |||||||  | |||||||||||| |||||||||||||||||||||||    
T  29797362 ccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctacaatctgaac 29797439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 29801181 - 29801258
Alignment:
Q  126 ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 202  Q
    |||||||||||||||| || |||||||||  |||||||  | |||||||||||| |||||||||||||||||||||||    
T  29801181 ccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctacaatctgaac 29801258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 234 - 408
Target Start/End: Complemental strand, 43276877 - 43276705
Alignment:
Q  234 tactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactata-tac 331  Q
    ||||||||| ||||||||||||    |  |||||||||| ||| ||||||||||| |||||||||||||||| ||||| || ||||||||| ||||  ||    
T  43276877 tactctttctacaatcaattttagtttcaaaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaa-ccattttcagaattatacaac 43276780  T
Q  332 tcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctc 408  Q
     ||| |||| |||| ||||||| ||||||||||||| ||| | |||  || ||||||| ||| ||||||||||||||    
T  43276779 ccattattagagaaagttagtcccacccttaccttaaattagatga--tcggactctacaagattgctcctcttctc 43276705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 14274075 - 14274159
Alignment:
Q  167 aggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaa 251  Q
    |||||||| |||||||| ||||||||||| |||||| ||| | | || ||||||||| || ||||||||| ||||||||||||||    
T  14274075 aggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 14274159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 290
Target Start/End: Complemental strand, 58532 - 58489
Alignment:
Q  247 atcaattttgcaatttaaccctaatttctataacatcaaaacta 290  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  58532 atcaattttgcaatttaaccctaatttctttaacatcaaaacta 58489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 290
Target Start/End: Original strand, 15720709 - 15720752
Alignment:
Q  247 atcaattttgcaatttaaccctaatttctataacatcaaaacta 290  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  15720709 atcaattttgcaatttaaccataatttctataacatcaaaacta 15720752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 337 - 446
Target Start/End: Original strand, 44374865 - 44374973
Alignment:
Q  337 attaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctctt-ctctgacttctcactttctcccctt 435  Q
    |||| |||| |||| |||||||||||||||||||| | |||  || | |||||  || |||||||||||||||| |||||||||||||||||||| | ||    
T  44374865 attagagaaagttactctcacccttaccttagattagatga--tcggtctctacgagattgctcctcttctctttctctgacttctcactttctctcttt 44374962  T
Q  436 ttctcccaaaa 446  Q
    |||||| ||||    
T  44374963 ttctccaaaaa 44374973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 337 - 446
Target Start/End: Original strand, 44383730 - 44383838
Alignment:
Q  337 attaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctctt-ctctgacttctcactttctcccctt 435  Q
    |||| |||| |||| |||||||||||||||||||| | |||  || | |||||  || |||||||||||||||| |||||||||||||||||||| | ||    
T  44383730 attagagaaagttactctcacccttaccttagattagatga--tcggtctctacgagattgctcctcttctctttctctgacttctcactttctctcttt 44383827  T
Q  436 ttctcccaaaa 446  Q
    |||||| ||||    
T  44383828 ttctccaaaaa 44383838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 251
Target Start/End: Complemental strand, 47975130 - 47975007
Alignment:
Q  128 aaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatga 227  Q
    |||||||||| ||||| | ||||||||||||||||  | || ||||| || ||||| ||||||||||| ||||||  || |  |||| ||||||||  |     
T  47975130 aaaaacccaaatttcatctacccaaattccaaatttgatagaaaacttaatctatgattattctacaacctgaacaccaattattaccttaattcatcgg 47975031  T
Q  228 attacctactctttcaacaatcaa 251  Q
    |||||||| |||||||||||||||    
T  47975030 attacctaatctttcaacaatcaa 47975007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 4325910 - 4325984
Alignment:
Q  128 aaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 202  Q
    |||||||||| ||||| |||||||||| |||||||  | |||||||| |||||||| ||||||||||| ||||||    
T  4325910 aaaaacccaaatttcatccacccaaatcccaaatttgataggaaacttaacctatgattattctacaacctgaac 4325984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 19195005 - 19195078
Alignment:
Q  128 aaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaa 201  Q
    |||||||||| ||||| | |||||||| |||||||  | |||||||| |||||||| |||||||||||||||||    
T  19195005 aaaaacccaaatttcatctacccaaatcccaaatttgataggaaacttaacctatgattattctacaatctgaa 19195078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 216 - 369
Target Start/End: Original strand, 21661156 - 21661310
Alignment:
Q  216 ttaattcaatgaattacctactctttcaacaatcaattttgcaatttaa--ccctaatttctataacatcaaaactattaacaactacaagcttaaaccc 313  Q
    |||||||| || ||||| ||| ||||||| |||||| || |||||| ||  |||||| ||||  ||||||| || ||| ||||||  |||  |||  |||    
T  21661156 ttaattcattggattacttacactttcaagaatcaaatt-gcaattcaaaaccctaacttcttaaacatcacaattatcaacaacatcaaagttagcccc 21661254  T
Q  314 tttttcagaactatata-ctcatgattaaagaaggttagtctcacccttaccttaga 369  Q
    |||||||||| |||||| ||||| ||||||||||||||||| |||||||||||||||    
T  21661255 tttttcagaattatataactcat-attaaagaaggttagtcccacccttaccttaga 21661310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 263 - 368
Target Start/End: Complemental strand, 8513858 - 8513752
Alignment:
Q  263 aaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcaccct 360  Q
    |||||||||| ||| | ||||||||| ||| |||||||||||| ||||||||||||| |||| ||||  || ||| |||| |||| ||||||| ||||||    
T  8513858 aaccctaatt-ctacagcatcaaaacctataaacaactacaaggttaaacccttttttagaattatacaacccattattagagaaagttagtcccaccct 8513760  T
Q  361 taccttag 368  Q
    ||||||||    
T  8513759 taccttag 8513752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 209 - 255
Target Start/End: Complemental strand, 16250385 - 16250340
Alignment:
Q  209 ccttacgttaattcaatgaattacctactctttcaacaatcaatttt 255  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||    
T  16250385 ccttacgttaattcaatgg-ttacctactctttcaacaatcaatttt 16250340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 412 - 453
Target Start/End: Original strand, 20620358 - 20620399
Alignment:
Q  412 tctgacttctcactttctccccttttctcccaaaaacagttt 453  Q
    ||||||||||||||||||||| || |||||||||||||||||    
T  20620358 tctgacttctcactttctccctttatctcccaaaaacagttt 20620399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 401 - 473
Target Start/End: Original strand, 33060539 - 33060609
Alignment:
Q  401 ctcttctcttctctgacttctcactttctccccttttctcccaaaaacagtttctacgtattctgactttcta 473  Q
    |||||||||||||||||||||| ||||||  | ||||||||||||||  |||| ||||| |||||||| ||||    
T  33060539 ctcttctcttctctgacttctccctttct--ctttttctcccaaaaattgtttttacgtgttctgactctcta 33060609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 558 - 595
Target Start/End: Complemental strand, 42565698 - 42565661
Alignment:
Q  558 taaacctacataatcttccttattccaattctaccctt 595  Q
    |||||||||||||||||||||||||||||||| |||||    
T  42565698 taaacctacataatcttccttattccaattctgccctt 42565661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 1856640 - 1856572
Alignment:
Q  126 ccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctaca 194  Q
    |||||| ||| | ||||| | |||||||| |||||||  | ||||||||||||||||||||||||||||    
T  1856640 ccaaaagccccaatttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctaca 1856572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 337 - 408
Target Start/End: Original strand, 11067490 - 11067559
Alignment:
Q  337 attaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctc 408  Q
    |||| |||| ||||||||||||||||||||| ||| | |||  || ||||||||||| ||||||||||||||    
T  11067490 attagagaaagttagtctcacccttaccttaaattagatga--tcggactctataagattgctcctcttctc 11067559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 386 - 437
Target Start/End: Complemental strand, 14156375 - 14156323
Alignment:
Q  386 tctataagcttgctcctcttctctt-ctctgacttctcactttctcccctttt 437  Q
    |||| ||| |||||||||||||||| |||||||||||||||||||||| ||||    
T  14156375 tctacaagattgctcctcttctctttctctgacttctcactttctcccttttt 14156323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 262 - 318
Target Start/End: Complemental strand, 48212835 - 48212779
Alignment:
Q  262 taaccctaatttctataacatcaaaactattaacaactacaagcttaaacccttttt 318  Q
    |||||||||||||||||||||||||||||  ||||| |||||  |||||||| ||||    
T  48212835 taaccctaatttctataacatcaaaactaacaacaattacaatgttaaacccctttt 48212779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 432
Target Start/End: Complemental strand, 42565778 - 42565747
Alignment:
Q  401 ctcttctcttctctgacttctcactttctccc 432  Q
    ||||||||||||||||||||||||||||||||    
T  42565778 ctcttctcttctctgacttctcactttctccc 42565747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 343 - 377
Target Start/End: Complemental strand, 8135262 - 8135228
Alignment:
Q  343 gaaggttagtctcacccttaccttagattggttga 377  Q
    |||||||||||||||||||||||||||||| ||||    
T  8135262 gaaggttagtctcacccttaccttagattgattga 8135228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 280 - 368
Target Start/End: Complemental strand, 8488183 - 8488093
Alignment:
Q  280 catcaaaac-tattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcacccttaccttag 368  Q
    ||||||||| ||| |||||||| ||| ||||||||||||| |||| ||||  || ||| |||| |||| ||||||| ||||||||||||||    
T  8488183 catcaaaacctataaacaactataaggttaaacccttttttagaattatacaacccattattagagaaagttagtcccacccttaccttag 8488093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 475 - 548
Target Start/End: Complemental strand, 11800001 - 11799930
Alignment:
Q  475 tttgttgtaaccctaattctctaatggtctcatctatttataatcactatctgagtttgtttttcacttaatct 548  Q
    ||||||||||||| |||||||||||   ||| ||||||||||||||| |   |||||||||| |||||||||||    
T  11800001 tttgttgtaacccgaattctctaatctcctcctctatttataatcacca--agagtttgtttctcacttaatct 11799930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 126 - 195
Target Start/End: Complemental strand, 14188534 - 14188464
Alignment:
Q  126 ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaa 195  Q
    |||||||||||||||| || |||||||||  |||||||  | |||||||| |||||||| |||||||||||    
T  14188534 ccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaa 14188464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 401 - 446
Target Start/End: Original strand, 14318165 - 14318210
Alignment:
Q  401 ctcttctcttctct-gacttctcactttctccccttttctcccaaaa 446  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||    
T  14318165 ctcttctcttctcttgacttctcactttct-cccttttctcccaaaa 14318210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 337 - 371
Target Start/End: Complemental strand, 36704601 - 36704567
Alignment:
Q  337 attaaagaaggttagtctcacccttaccttagatt 371  Q
    ||||||||||||||||| |||||||||||||||||    
T  36704601 attaaagaaggttagtcccacccttaccttagatt 36704567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 372
Target Start/End: Original strand, 15624046 - 15624075
Alignment:
Q  343 gaaggttagtctcacccttaccttagattg 372  Q
    ||||||||||||||||||||||||||||||    
T  15624046 gaaggttagtctcacccttaccttagattg 15624075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 370
Target Start/End: Complemental strand, 16250284 - 16250219
Alignment:
Q  306 ttaaaccctttttcagaactatata-ctcatgattaaagaaggttagtctcacccttaccttagat 370  Q
    ||||||||||||||| || |||| | ||||| |||| |||| ||||||| ||||||||||||||||    
T  16250284 ttaaaccctttttcaaaattatacaactcattattagagaaagttagtcccacccttaccttagat 16250219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 479 - 548
Target Start/End: Original strand, 21508720 - 21508789
Alignment:
Q  479 ttgtaaccctaattctctaatggtctcatctatttataatcactatctgagtttgtttttcacttaatct 548  Q
    |||||||||||||| ||||||| |||| |||||||||||| || |  ||| || |||||| |||||||||    
T  21508720 ttgtaaccctaattttctaatgctctcctctatttataataaccaattgaattagttttttacttaatct 21508789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 13917812 - 13917744
Alignment:
Q  126 ccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctaca 194  Q
    |||||| ||| | ||||| | ||||| || |||||||  | ||||||||||||||||||||||||||||    
T  13917812 ccaaaagccccaatttcatcaacccagatcccaaatttgataggaaactcaacctatgtttattctaca 13917744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 337 - 408
Target Start/End: Complemental strand, 32433619 - 32433550
Alignment:
Q  337 attaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctc 408  Q
    |||| |||| ||||||||||||||||||||| ||| | |||  || ||||||| ||| ||||||||||||||    
T  32433619 attagagaaagttagtctcacccttaccttaaattagatga--tcggactctacaagattgctcctcttctc 32433550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 235; Significance: 1e-129; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 10 - 550
Target Start/End: Complemental strand, 3527512 - 3526991
Alignment:
Q  10 gcgagtagaacactcaccngttgcgagttgatatcgaagtcactcgcaaggcgaacaagatcacccgccgtggtgagcgatgacaaacagttctacggga 109  Q
    ||||||| ||||||| || || ||||||||| ||||| |||||| || |||||||||||| ||| |||||| | ||||||||||||||||||||||||||    
T  3527512 gcgagtaaaacactcgcc-gtggcgagttgacatcgaggtcacttgcgaggcgaacaagaacactcgccgttgcgagcgatgacaaacagttctacggga 3527414  T
Q  110 agaaatctattttttcccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaa-tctgaacctcatt 208  Q
    ||||| |||||||   ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  3527413 agaaacctattttcagccaaaaacccaattttcaaccacccaaatcccaaattcaataggaaactcaacctatgtttattctacaattctgaacctcatt 3527314  T
Q  209 ccttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactattaacaactacaagctta 308  Q
    ||||||||||||||||||  ||||||||||||||||||||||| | | ||| ||||||||||||||||||||||||||||||  || ||| ||| | |||    
T  3527313 ccttacgttaattcaatggcttacctactctttcaacaatcaa-tctacaaattaaccctaatttctataacatcaaaactaacaa-aacaacatg-tta 3527217  T
Q  309 aaccctttttcagaactata-tactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttct 407  Q
    ||||| |||| | ||  |||  || ||| |||| |||| | ||||| ||||||||||||||||  ||||||||| ||||||| ||| |||||||||||||    
T  3527216 aacccctttttaaaatcatacaacccattattagagaaagctagtcccacccttaccttagataagttgaattcggactctacaagtttgctcctcttct 3527117  T
Q  408 cttctctgacttctcactttctccccttttctcccaaaaacagtttctacgtattctgactttctaatttgttgtaaccctaattctctaatggtctcat 507  Q
     |||||||||||||   |||||||| |||||||||||||||||                 ||||||||||||||||||||||||||||||||||||||||    
T  3527116 attctctgacttcttcatttctccctttttctcccaaaaacag-----------------tttctaatttgttgtaaccctaattctctaatggtctcat 3527034  T
Q  508 ctatttataatcactatctgagtttgtttttcacttaatctct 550  Q
    |||||||||||||||| |||||||||||| ||| |||||||||    
T  3527033 ctatttataatcactaactgagtttgtttctcatttaatctct 3526991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 266 - 550
Target Start/End: Complemental strand, 21845753 - 21845466
Alignment:
Q  266 cctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttacct 365  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  21845753 cctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactatatacttatgattaaagaaggttagtcccacccttacct 21845654  T
Q  366 tagattggttgaattcagactctataagcttgctcctcttctcttctctgacttctcactttctccccttttctcccaaaaacagtttctacgtat---- 461  Q
    |||||||    ||||  |||| || ||| || ||||||||||||| ||| ||||||||||||||||| ||||||||||||| ||||||||||||||        
T  21845653 tagattg----aatttggactttacaagttttctcctcttctcttatctaacttctcactttctccctttttctcccaaaagcagtttctacgtattctg 21845558  T
Q  462 ---tctgactttctaatttgttgtaaccctaattctctaatggtctcatctatttataatcactatctgagtttgtttttcacttaatctct 550  Q
       ||||||| |||| | ||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||| |||||||||||||    
T  21845557 tattctgactctctattctgttgtaaccctaattctctaatggtctcatatatttataatcactaactgtgtttgtttctcacttaatctct 21845466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 10 - 532
Target Start/End: Complemental strand, 12917669 - 12917134
Alignment:
Q  10 gcgagtagaacactcaccngttgcgagttgatatcgaagtcactcgcaaggcgaacaagatcacccgccgtggtgagcgatgacaaacagttctacggga 109  Q
    ||||||||||||||| || |||||||||||| ||||||||||||||| |||||||||||||||   ||||||| |||| |||||| | ||||||| ||||    
T  12917669 gcgagtagaacactcgcc-gttgcgagttgacatcgaagtcactcgcgaggcgaacaagatcatttgccgtggcgagcaatgacagaaagttctatggga 12917571  T
Q  110 agaaatctattttttcccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattc 209  Q
    ||||| || ||||  ||||||||||| | ||| ||||| | | || || ||||||| ||||||||| ||||||| ||||| ||||| ||||||  || |     
T  12917570 agaaacctgttttcccccaaaaaccccaattttaaccaacaacatcccgaattcaataggaaactctacctatgattattttacaacctgaacaccaatt 12917471  T
Q  210 cttacgttaattcaatgaattacctactctttcaacaatcaattttgcaattt---aaccctaatttctataacatcaaaactattaa--caactacaag 304  Q
     |||| ||| ||||  | |||||||||| || ||||||||||||||  |||||   || ||||||||||  |  ||| ||| ||  ||  |||| ||||     
T  12917470 attaccttacttcatcggattacctacttttccaacaatcaatttt--aatttcaaaaacctaatttctcaacaatctaaattaacaaaacaacaacaac 12917373  T
Q  305 c---ttaaaccctttttcagaactatata-ctcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctc 400  Q
    |   ||||||||||||| ||||  ||| | | ||| |||| |||| ||||||| |||||||| |||||||||||||||||| ||||||| ||||||||||    
T  12917372 catgttaaacccttttttagaatcatacaacccattattagagaaagttagtcccacccttatcttagattggttgaattcggactctacaagcttgctc 12917273  T
Q  401 ctcttctcttctctgacttctcactttctccccttttctcccaaaaacagtttctacgtat-------tctgactttctaatttgttgtaaccctaattc 493  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||       ||||| ||||||||||||||||||||||||||    
T  12917272 ctcttctcttctctgacttctcactttttccctttttctcccaaaagcagtttctacgtattctgtattctgaatttctaatttgttgtaaccctaattc 12917173  T
Q  494 tctaatggtctcatctatttataatcactatctgagttt 532  Q
    |||||||||||||||| ||||||||| ||| ||||||||    
T  12917172 tctaatggtctcatctgtttataatctctaactgagttt 12917134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 136 - 546
Target Start/End: Original strand, 25201957 - 25202366
Alignment:
Q  136 aattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattaccta 235  Q
    |||||||||||| |||||| |||||||||| |||||||||||||||||||||||||| |||  |||| |||     |||  ||||||| ||||||| |||    
T  25201957 aattttcaaccatccaaatcccaaattcaataggaaactcaacctatgtttattctagaat--gaacatcaaattgtacactaattcattgaattatcta 25202054  T
Q  236 ctctttcaacaatcaattttgcaatttaaccctaatttctataa-catcaaaa-ctattaacaactacaagcttaaaccctttttcagaactatatactc 333  Q
    |  ||| |||||||||||    |||  || |||||||||| ||| |||||||| | |  |||||| || |  ||||||||| |||||||  |||| || |    
T  25202055 cctttttaacaatcaattcca-aatcaaaacctaatttctctaatcatcaaaatcaaacaacaacaaccatgttaaaccctatttcagatttataaaccc 25202153  T
Q  334 atgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctctt-ctctgacttctcactttctccc 432  Q
    || ||||  |||| | |||| |||||||||||||||||  |||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  25202154 attattagcgaagct-agtcccacccttaccttagatttattgaattcggactctacaagcttgctcctcttctctttctctgacttctcactttctccc 25202252  T
Q  433 cttttctcccaaaaacagtttctacgtattctgactttctaatttgttgtaaccctaattctctaatggtctcatctatttataatcactatctgagttt 532  Q
     ||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  25202253 tttttctcccaaaagcagtttctacgtattctgactctctattttgttgtaaccctaattctttaatggtctcatctatttataatcactaactgagttt 25202352  T
Q  533 gtttttcacttaat 546  Q
    |||| |||||||||    
T  25202353 gtttctcacttaat 25202366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 50 - 546
Target Start/End: Complemental strand, 48043796 - 48043298
Alignment:
Q  50 cactcgcaaggcgaacaagat-cacccgccgtggtgagcgatgacaaacagttctacgggaagaaatctattttttc-ccaaaaacccaatttt-caacc 146  Q
    ||||||| |||||| |||| | ||| |||||||| ||||||||||| |||| |||||||||||||  ||| ||||   |||||||||||||||| |||||    
T  48043796 cactcgcgaggcgagcaaggttcactcgccgtggcgagcgatgacagacagctctacgggaagaa--ctagttttcatccaaaaacccaatttttcaacc 48043699  T
Q  147 acccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaaca 246  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||  ||||| |||     |||  ||||||| ||||||| ||||  ||| ||||    
T  48043698 acccaaatcccaaattcaataggaaactcaacctatgtttattctacaacttgaacatcaaattgtacactaattcattgaattatctacctttttaaca 48043599  T
Q  247 atcaattttgcaatttaaccctaatttctataa-catcaaaactattaacaactacaagc---ttaaaccctttttcagaactatatactcatgattaaa 342  Q
    |||||||    |||  ||  ||||||||| ||| ||||||||  |  |||||| |||| |   ||||||||| ||||| || |||| |  ||| |||| |    
T  48043598 atcaattcca-aatcaaaatctaatttctctaatcatcaaaatca--aacaacaacaatcatgttaaaccctatttcaaaattataaatccattattaga 48043502  T
Q  343 gaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctctt-ctctgacttctcactttctccccttttctcc 441  Q
    |||| | |||  |||||||||||||||||| |||||||| || |||| |||||||||||||||||||| ||||||||||||||||| || | ||||||||    
T  48043501 gaagct-agttacacccttaccttagattgattgaattcggattctacaagcttgctcctcttctctttctctgacttctcactttttctctttttctcc 48043403  T
Q  442 caaaaacagtttctacgtattctgactttctaatttgttgtaaccctaattctctaatggtctcatctatttataatcactatctgagtttgtttttcac 541  Q
    ||||| ||||||||||||||||||||| |||  |||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||| || ||||    
T  48043402 caaaagcagtttctacgtattctgactctctgttttgttgtaaccataattctctaatgatctcatctatttataatcactaactgagtttgcttctcac 48043303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 10 - 447
Target Start/End: Complemental strand, 45803693 - 45803252
Alignment:
Q  10 gcgagtagaacactcaccngttgcgagttgatatcgaagtcactcgcaaggcgaacaagatcacccgccgtggtgagcgatgacaaacagttctacggga 109  Q
    ||||||| ||||||| || |||| ||||||| ||||  ||||||||| |||||||||||| ||| |||||||| ||| |||| || ||||||||||||||    
T  45803693 gcgagtaaaacactcgcc-gttgtgagttgacatcgtggtcactcgcgaggcgaacaagaacactcgccgtggcgagtgatggcagacagttctacggga 45803595  T
Q  110 agaaatctattttttcccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattc 209  Q
    ||||| || ||||   ||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||| ||| || ||| |     
T  45803594 agaaacctgttttcagccaaaaacccaattttcaaccaccctaatcccaaattcaataggaaactcaacctatgtttattctacaacctggacatcaatt 45803495  T
Q  210 cttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaact-----attaacaactacaag 304  Q
    |||| |||||||||  | ||||||||||||||||||||||||||||    |  || ||||||||||  |  ||||||| |     |  |||||| || |     
T  45803494 cttatgttaattcatcggattacctactctttcaacaatcaattttagtttcaaaacctaatttctcaacaatcaaaattaacaaaacaacaacaacgat 45803395  T
Q  305 cttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctc 403  Q
     |||||||||||||||||| ||||  || ||| |||| |||| | ||||| |||||| || ||||||||||||||||| ||||||| ||| |||||||||    
T  45803394 gttaaaccctttttcagaattatacaacccattattagagaaagctagtcccaccctaactttagattggttgaattcggactcta-aagtttgctcctc 45803296  T
Q  404 ttctc-ttctctgacttctcactttctccccttttctcccaaaaa 447  Q
    ||||| ||||||||||||||||||||| || ||||||||||||||    
T  45803295 ttctctttctctgacttctcactttct-cctttttctcccaaaaa 45803252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 216 - 432
Target Start/End: Complemental strand, 3160777 - 3160561
Alignment:
Q  216 ttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctt 315  Q
    |||||||| ||||||||||||||||||||||||||| || ||||||||| |||||||||||||| ||||||||||| |||||||||||  |||||||| |    
T  3160777 ttaattcattgaattacctactctttcaacaatcaaatt-gcaatttaaacctaatttctataatatcaaaactatcaacaactacaaagttaaacccat 3160679  T
Q  316 tttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcag-actctataagcttgctcctcttctcttctct 414  Q
    ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||| |||||| | | |||||||||||||    
T  3160678 ttttagaattatatactcatgattaaagaaggttagtctcacccttaccttagattggttaaattcagaattctacaagctttcccttcttctcttctct 3160579  T
Q  415 gacttctcactttctccc 432  Q
    ||||||||||||||||||    
T  3160578 gacttctcactttctccc 3160561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 185 - 375
Target Start/End: Original strand, 48631202 - 48631391
Alignment:
Q  185 ttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatca 284  Q
    ||||||||||| |||||| ||| | |||| ||||||||| |||||||||||| ||||||||||||||||  ||||||||||||| | |||||||||||||    
T  48631202 ttattctacaacctgaacatcaattcttatgttaattcattgaattacctacactttcaacaatcaatta-gcaatttaaccctgacttctataacatca 48631300  T
Q  285 aaactattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagattggtt 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||    
T  48631301 aaactattaacaactacaagcttaaaccctttttcagaactatatatttatgattaaagaaggttagtcccacccttaccttagattggtt 48631391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 215 - 550
Target Start/End: Complemental strand, 12151099 - 12150761
Alignment:
Q  215 gttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactattaacaactacaagcttaaaccct 314  Q
    ||||||||| ||  |||||||| ||||||||||||||||| | || |||||||||| |||||||||||||||||||||||||| ||||||| |||| ||     
T  12151099 gttaattcattgggttacctacactttcaacaatcaattt-gaaaattaaccctaacttctataacatcaaaactattaacaaatacaagcctaaatccc 12151001  T
Q  315 ttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcag-actctataagcttgctc------------- 400  Q
    ||||||||   ||||||| |||||||||||||||||||| ||| |||||||||||||||||  | || | | |||| |||||| | |                 
T  12151000 ttttcagatacatatactaatgattaaagaaggttagtcccactcttaccttagattggttacactctgaattctacaagctttcccttcttcttacaaa 12150901  T
Q  401 -ctcttctcttctctgacttctcactttctccccttttctcccaaaaacagtttctacgtattctgactttctaatttgttgtaaccctaattctctaat 499  Q
     |||||||||||||||||||||||||||||           || ||||  ||||  |||| || ||||| |||| |||||||||||||||||||||||||    
T  12150900 gctcttctcttctctgacttctcactttct-----------cctaaaattgttttcacgtgttatgactctctattttgttgtaaccctaattctctaat 12150812  T
Q  500 ggtctcatctatttataatcactatctgagtttgtttttcacttaatctct 550  Q
    |||||||||||||||||||||||| || ||||||||| |||||||||||||    
T  12150811 ggtctcatctatttataatcactaactaagtttgtttctcacttaatctct 12150761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 84 - 464
Target Start/End: Original strand, 29907404 - 29907787
Alignment:
Q  84 gagcgatgacaaacagttctacgggaagaaatctattttttcccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctat 182  Q
    |||||||||| |  || |||||||||||||| |  ||||   |||||||||||||||| |||||||||||||||||||||  | |||||| || ||||||    
T  29907404 gagcgatgacgattagctctacgggaagaaaccagttttcagccaaaaacccaatttttcaaccacccaaattccaaatttgataggaaattctacctat 29907503  T
Q  183 gtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaat-caattttgcaatttaaccctaatttctataa-c 280  Q
    ||||||||| |||   ||||  || |   |||  |||||||    ||||||||| ||||||||||| |||||||    | |||||||||||||| ||| |    
T  29907504 gtttattctgcaactcgaacaccaataaataccctaattcatcatattacctacactttcaacaattcaattttaatttctaaccctaatttctctaatc 29907603  T
Q  281 atcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcacccttaccttagattggttgaat 379  Q
    |||||| |||  |||||||||||| |||||||||||||||||| ||||  || ||  ||||||||| | ||||| ||||||||||||||||| | ||| |    
T  29907604 atcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccaatattaaagaaagctagtcccacccttaccttagattagatgatt 29907703  T
Q  380 tcagactctataagcttgctcctcttctc-ttctctgacttctcactttctccccttttctcccaaaaacagtttctacgtattct 464  Q
     | |||||||  ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||  |||||||||    
T  29907704 ccggactcta-gagcttgctcctcttctctttctctgacttctcactttct-cccttttctcccaaaaacagtttgcacgtattct 29907787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 84 - 464
Target Start/End: Original strand, 29948570 - 29948953
Alignment:
Q  84 gagcgatgacaaacagttctacgggaagaaatctattttttcccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctat 182  Q
    |||||||||| |  || |||||||||||||| |  ||||   |||||||||||||||| |||||||||||||||||||||  | |||||| || ||||||    
T  29948570 gagcgatgacgattagctctacgggaagaaaccagttttcagccaaaaacccaatttttcaaccacccaaattccaaatttgataggaaattctacctat 29948669  T
Q  183 gtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaat-caattttgcaatttaaccctaatttctataa-c 280  Q
    ||||||||| |||   ||||  || |   |||  |||||||    ||||||||| ||||||||||| |||||||    | |||||||||||||| ||| |    
T  29948670 gtttattctgcaactcgaacaccaataaataccctaattcatcatattacctacactttcaacaattcaattttaatttctaaccctaatttctctaatc 29948769  T
Q  281 atcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcacccttaccttagattggttgaat 379  Q
    |||||| |||  |||||||||||| |||||||||||||||||| ||||  || ||  ||||||||| | ||||| ||||||||||||||||| | ||| |    
T  29948770 atcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccaatattaaagaaagctagtcccacccttaccttagattagatgatt 29948869  T
Q  380 tcagactctataagcttgctcctcttctc-ttctctgacttctcactttctccccttttctcccaaaaacagtttctacgtattct 464  Q
     | |||||||  ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||  |||||||||    
T  29948870 ccggactcta-gagcttgctcctcttctctttctctgacttctcactttct-cccttttctcccaaaaacagtttgcacgtattct 29948953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 84 - 464
Target Start/End: Original strand, 29997724 - 29998107
Alignment:
Q  84 gagcgatgacaaacagttctacgggaagaaatctattttttcccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctat 182  Q
    |||||||||| |  || |||||||||||||| |  ||||   |||||||||||||||| |||||||||||||||||||||  | |||||| || ||||||    
T  29997724 gagcgatgacgattagctctacgggaagaaaccagttttcagccaaaaacccaatttttcaaccacccaaattccaaatttgataggaaattctacctat 29997823  T
Q  183 gtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaat-caattttgcaatttaaccctaatttctataa-c 280  Q
    ||||||||| |||   ||||  || |   |||  |||||||    ||||||||| ||||||||||| |||||||    | |||||||||||||| ||| |    
T  29997824 gtttattctgcaactcgaacaccaataaataccctaattcatcatattacctacactttcaacaattcaattttaatttctaaccctaatttctctaatc 29997923  T
Q  281 atcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcacccttaccttagattggttgaat 379  Q
    |||||| |||  |||||||||||| |||||||||||||||||| ||||  || ||  ||||||||| | ||||| ||||||||||||||||| | ||| |    
T  29997924 atcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccaatattaaagaaagctagtcccacccttaccttagattagatgatt 29998023  T
Q  380 tcagactctataagcttgctcctcttctc-ttctctgacttctcactttctccccttttctcccaaaaacagtttctacgtattct 464  Q
     | |||||||  ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||  |||||||||    
T  29998024 ccggactcta-gagcttgctcctcttctctttctctgacttctcactttct-cccttttctcccaaaaacagtttgcacgtattct 29998107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 229 - 447
Target Start/End: Complemental strand, 22841423 - 22841200
Alignment:
Q  229 ttacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactattaa--caactacaagc---ttaaaccctttttcagaa 323  Q
    ||||||||||||||||||||||||| | ||| |||||||||||||||||||| |||||||||  ||  |||| |||| |   ||||||||||||||||||    
T  22841423 ttacctactctttcaacaatcaattctacaaattaaccctaatttctataacctcaaaactaacaaaacaacaacaatcatgttaaaccctttttcagaa 22841324  T
Q  324 ctatata-ctcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctc-ttctctgacttct 421  Q
     |||| | | ||| |||| |||| | ||||| ||||||||| ||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||    
T  22841323 ttatacaacccattattagagaaagctagtcccacccttacattagattggttgaattcggactcta-aagcttgctcctcttctctttctctgacttct 22841225  T
Q  422 cactttctccccttttctcccaaaaa 447  Q
    |||||||| |||||||||||||||||    
T  22841224 cactttct-cccttttctcccaaaaa 22841200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 215 - 358
Target Start/End: Complemental strand, 12155179 - 12155034
Alignment:
Q  215 gttaattcaatgaattacctactctttcaacaatcaatt--ttgcaatttaaccctaatttctataacatcaaaactattaacaactacaagcttaaacc 312  Q
    ||||||||| ||  |||||||| ||||||||||||||||  |||||| |||||||||| |||||||||||||||||||||||||||||||| | |||| |    
T  12155179 gttaattcattgggttacctacactttcaacaatcaattaattgcaaattaaccctaacttctataacatcaaaactattaacaactacaatcctaaatc 12155080  T
Q  313 ctttttcagaactatatactcatgattaaagaaggttagtctcacc 358  Q
    | |||||||||| ||||||| |||||||||||||||||||| ||||    
T  12155079 ccttttcagaaccatatacttatgattaaagaaggttagtcccacc 12155034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 147 - 371
Target Start/End: Complemental strand, 50351037 - 50350812
Alignment:
Q  147 acccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaaca 246  Q
    |||||||| |||||||  | || ||||||  |||||||||||| ||||| |||||| ||| ||  |||  ||  ||| || ||||||||| |||| ||||    
T  50351037 acccaaatcccaaattttatagaaaactcttcctatgtttattatacaacctgaacatcaatctgtacactatgtcattggattacctacgcttttaaca 50350938  T
Q  247 atcaattttgcaatttaaccctaatttctataacatcaaaactattaacaactacaa-gcttaaaccc--tttttcagaactatatactcatgattaaag 343  Q
    || || ||  |||| |||||||||| ||||||||||||||||||  || |||||||| | ||||||||  |||||||||| |||||||||||||||||||    
T  50350937 attaaatt--caatctaaccctaatctctataacatcaaaactaacaaaaactacaaaggttaaaccccttttttcagaattatatactcatgattaaag 50350840  T
Q  344 aaggttagtctcacccttaccttagatt 371  Q
    |||||||||| |||||||||||||||||    
T  50350839 aaggttagtcccacccttaccttagatt 50350812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 263 - 371
Target Start/End: Complemental strand, 53646163 - 53646055
Alignment:
Q  263 aaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcaccctt 361  Q
    |||||||||| ||| ||||||||||| |||||||||||||||| |||||||||||||||| | || ||| | |||||||||||||||||||| |||||||    
T  53646163 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatatttatgattaaagaaggttagtcccaccctt 53646065  T
Q  362 accttagatt 371  Q
    ||||||||||    
T  53646064 accttagatt 53646055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 126 - 253
Target Start/End: Original strand, 16979723 - 16979849
Alignment:
Q  126 ccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaat 225  Q
    |||||| ||| | ||||| | ||||||||||||||||  | ||||||||||||||||||||||||||||  |||||| ||| | |||| ||||||||| |    
T  16979723 ccaaaagccccaatttcatcaacccaaattccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcatt 16979822  T
Q  226 gaattacctactctttcaacaatcaatt 253  Q
    |||||||||||||||| |||||||||||    
T  16979823 gaattacctactcttt-aacaatcaatt 16979849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 262 - 372
Target Start/End: Original strand, 17208470 - 17208581
Alignment:
Q  262 taaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcaccct 360  Q
    |||||||||||||||||||||||||||||  |||||||||||| ||||| |||||||||||| ||||  |||||| |||| |||| | ||||| ||||||    
T  17208470 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaatcctttttcagaattatacaactcattattagagaaagctagtcccaccct 17208569  T
Q  361 taccttagattg 372  Q
    ||||||||||||    
T  17208570 taccttagattg 17208581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 258 - 372
Target Start/End: Original strand, 14520388 - 14520503
Alignment:
Q  258 aatttaaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctca 356  Q
    |||||||||||||||| ||||||||||||||||  |||||||||||| ||||||| ||||| |||| ||||  || ||| ||||||||| | ||||| ||    
T  14520388 aatttaaccctaatttttataacatcaaaactaacaacaactacaaggttaaacctttttttagaattatacaacccattattaaagaaagctagtccca 14520487  T
Q  357 cccttaccttagattg 372  Q
    ||||||||||||||||    
T  14520488 cccttaccttagattg 14520503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 278 - 445
Target Start/End: Complemental strand, 14641638 - 14641471
Alignment:
Q  278 aacatcaaaactattaacaactacaagcttaaaccctttttcagaactatata-ctcatgattaaagaaggttagtctcacccttaccttagattggttg 376  Q
    |||||||| ||||  |||||||||||| ||||||||||||| |||| |||| | | ||| |||| |||| | || || ||||||||||||||||| | ||    
T  14641638 aacatcaatactaacaacaactacaaggttaaacccttttttagaattatacaacccattattagagaaagctaatcccacccttaccttagattagatg 14641539  T
Q  377 aattcagactctataagcttgctcctcttctctt-ctctgacttctcactttctccccttttctcccaaa 445  Q
    |  || | |||||  || |||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  14641538 a--tcggtctctacgagattgctcctcttctctttctctgacttctcactttctccctttttctcccaaa 14641471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 404 - 463
Target Start/End: Complemental strand, 24548925 - 24548866
Alignment:
Q  404 ttctcttctctgacttctcactttctccccttttctcccaaaaacagtttctacgtattc 463  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  24548925 ttctcttctctgacttctcactttctccctttttctcccaaaagcagtttctacgtattc 24548866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 263 - 360
Target Start/End: Complemental strand, 54330411 - 54330314
Alignment:
Q  263 aaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcaccct 360  Q
    |||||||||| ||| ||||||||||| |||||||||||||||| |||||||||||||||| | || ||||| |||||||||||| ||||||| ||||||    
T  54330411 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaagttagtcccaccct 54330314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 29 - 108
Target Start/End: Complemental strand, 3160958 - 3160878
Alignment:
Q  29 gttgcgagttgatatcgaagtcactcgcaaggcgaacaaga-tcacccgccgtggtgagcgatgacaaacagttctacggg 108  Q
    |||||||||||||||| ||| ||||||| |||||||||||| |||| |||||||||||||||||||||| || ||||||||    
T  3160958 gttgcgagttgatatctaagccactcgcgaggcgaacaagattcactcgccgtggtgagcgatgacaaatagctctacggg 3160878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 126 - 253
Target Start/End: Original strand, 22652584 - 22652710
Alignment:
Q  126 ccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaat 225  Q
    |||||| ||| | ||||| | |||||||| |||||||  | ||||||||||||||||||||||||||||  |||||| ||| | |||| ||||||||| |    
T  22652584 ccaaaagccccaatttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcact 22652683  T
Q  226 gaattacctactctttcaacaatcaatt 253  Q
      |||||||||||||| |||||||||||    
T  22652684 agattacctactcttt-aacaatcaatt 22652710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 3803625 - 3803702
Alignment:
Q  126 ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 202  Q
    |||||||||||||||| || |||||||||  |||||||  | ||||||||||||||||||||||||||||||||||||    
T  3803625 ccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaac 3803702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 435 - 532
Target Start/End: Complemental strand, 12154957 - 12154861
Alignment:
Q  435 tttctcccaaaaacagtttctacgtattctgactttctaatttgttgtaaccctaattctctaatggtctcatctatttataatcactatctgagttt 532  Q
    |||||||||||| | ||||  |||| |||||||| |||| || ||||||||| |||||| |||||||||||||||||||| |||||||| ||||||||    
T  12154957 tttctcccaaaa-ctgttttcacgtgttctgactctctatttggttgtaaccttaattccctaatggtctcatctatttacaatcactaactgagttt 12154861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 12305874 - 12305951
Alignment:
Q  126 ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 202  Q
    |||||||||||||||| || |||||||||  |||||||  | ||||||||||||||||||||||||||||||||||||    
T  12305874 ccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaac 12305951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 263 - 378
Target Start/End: Original strand, 6003133 - 6003248
Alignment:
Q  263 aaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactatata-ctcatgattaaagaaggttagtctcaccctt 361  Q
    ||||||||||||| |||||||| || ||| ||||||  |||  |||  ||||||||||||| |||| | ||||| ||||||||||||||||| |||||||    
T  6003133 aaccctaatttctttaacatcacaattatcaacaacatcaaagttagcccctttttcagaattatagaactcat-attaaagaaggttagtcccaccctt 6003231  T
Q  362 accttagattggttgaa 378  Q
    |||||||||||| ||||    
T  6003232 accttagattggatgaa 6003248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 247 - 290
Target Start/End: Complemental strand, 17684957 - 17684914
Alignment:
Q  247 atcaattttgcaatttaaccctaatttctataacatcaaaacta 290  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  17684957 atcaattttgcaatttaaccctaatttctataacatcaaaacta 17684914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 247 - 290
Target Start/End: Complemental strand, 54875596 - 54875553
Alignment:
Q  247 atcaattttgcaatttaaccctaatttctataacatcaaaacta 290  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  54875596 atcaattttgcaatttaaccctaatttctataacatcaaaacta 54875553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 249 - 290
Target Start/End: Original strand, 14442107 - 14442148
Alignment:
Q  249 caattttgcaatttaaccctaatttctataacatcaaaacta 290  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  14442107 caattttgcaatttaaccctaatttctataacatcaaaacta 14442148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 29544274 - 29544197
Alignment:
Q  126 ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 202  Q
    |||||||||||||||| || |||| ||||  |||||||  | ||||||||||||||||||||||||||||||||||||    
T  29544274 ccaaaaacccaatttttcatccactcaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaac 29544197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 54521574 - 54521651
Alignment:
Q  126 ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 202  Q
    |||||||||||||||| || |||||||||  |||||||  | |||||||||||||||| |||||||||||||||||||    
T  54521574 ccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatatttattctacaatctgaac 54521651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 409 - 453
Target Start/End: Original strand, 10380031 - 10380075
Alignment:
Q  409 ttctctgacttctcactttctccccttttctcccaaaaacagttt 453  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  10380031 ttctctgacttctcactttctccctttttctcccaaaaacagttt 10380075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 290
Target Start/End: Original strand, 6156641 - 6156684
Alignment:
Q  247 atcaattttgcaatttaaccctaatttctataacatcaaaacta 290  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  6156641 atcaattctgcaatttaaccctaatttctataacatcaaaacta 6156684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 290
Target Start/End: Original strand, 6159335 - 6159378
Alignment:
Q  247 atcaattttgcaatttaaccctaatttctataacatcaaaacta 290  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  6159335 atcaattctgcaatttaaccctaatttctataacatcaaaacta 6159378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 263 - 368
Target Start/End: Complemental strand, 14152504 - 14152398
Alignment:
Q  263 aaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcaccct 360  Q
    |||||||||| ||| ||||||||||| || ||||||||||||| ||||||||||||||||||  |||  |||||| |||| |||| | ||||| ||||||    
T  14152504 aaccctaatt-ctacaacatcaaaacctactaacaactacaaggttaaaccctttttcagaatgatacaactcattattagagaaagctagtcccaccct 14152406  T
Q  361 taccttag 368  Q
    ||||||||    
T  14152405 taccttag 14152398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 290
Target Start/End: Complemental strand, 17669820 - 17669777
Alignment:
Q  247 atcaattttgcaatttaaccctaatttctataacatcaaaacta 290  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  17669820 atcatttttgcaatttaaccctaatttctataacatcaaaacta 17669777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 228 - 372
Target Start/End: Original strand, 5215559 - 5215704
Alignment:
Q  228 attacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaacta 326  Q
    |||| ||||||| || ||||||||||||    || |||||||||| ||| ||||||||||| |||||| ||||||||| ||||||||||||||| || ||    
T  5215559 attatctactctatctacaatcaattttagttttaaaccctaatt-ctacaacatcaaaacctattaataactacaaggttaaaccctttttcataatta 5215657  T
Q  327 ta-tactcatgattaaagaaggttagtctcacccttaccttagattg 372  Q
    ||  |||||| |||| |||| | ||||  ||||||||||||| ||||    
T  5215658 tacaactcattattagagaaagctagtgccacccttaccttatattg 5215704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 279 - 371
Target Start/End: Original strand, 15566706 - 15566800
Alignment:
Q  279 acatcaaaac-tattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcacccttaccttagatt 371  Q
    |||||||||| |||||||||||||||| |||||||||||||||||| ||||  ||| |  |||| |||| ||||||| ||||||||| |||||||    
T  15566706 acatcaaaacctattaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccacccttactttagatt 15566800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 475 - 548
Target Start/End: Complemental strand, 3262188 - 3262115
Alignment:
Q  475 tttgttgtaaccctaattctctaatggtctcatctatttataatcactatctgagtttgtttttcacttaatct 548  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||| |  | ||||||||| | |||||||||    
T  3262188 tttgttgtaaccctaattctctaatgctctcctctatttataaccaccaattaagtttgtttcttacttaatct 3262115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 13437050 - 13437127
Alignment:
Q  126 ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 202  Q
    |||||||||||||||| ||  ||||||||  |||||||  | ||||||||||||||||||||||||||||| ||||||    
T  13437050 ccaaaaacccaatttttcattcacccaaaccccaaatttgataggaaactcaacctatgtttattctacaacctgaac 13437127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 401 - 453
Target Start/End: Original strand, 10558978 - 10559030
Alignment:
Q  401 ctcttctcttctctgacttctcactttctccccttttctcccaaaaacagttt 453  Q
    |||||||||||||| ||||||||||||||||| ||||||| ||||| ||||||    
T  10558978 ctcttctcttctcttacttctcactttctccctttttctctcaaaagcagttt 10559030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 290
Target Start/End: Complemental strand, 2841628 - 2841585
Alignment:
Q  247 atcaattttgcaatttaaccctaatttctataacatcaaaacta 290  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||    
T  2841628 atcaattctgcaatttaactctaatttctataacatcaaaacta 2841585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 6159506 - 6159559
Alignment:
Q  401 ctcttctcttctct-gacttctcactttctccccttttctcccaaaaacagtttc 454  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||| |||||||    
T  6159506 ctcttctcttctcttgacttctcactttctccc-ttttctcccaaaagcagtttc 6159559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 42339 - 42416
Alignment:
Q  126 ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 202  Q
    |||||||||||||||| || |||||||||  |||||||  | |||||||| |||||||| ||||||||||| ||||||    
T  42339 ccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaac 42416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 5224138 - 5224203
Alignment:
Q  129 aaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctaca 194  Q
    ||||||| | ||||| | |||||||| |||||||  | ||||||||||||||||||||||||||||    
T  5224138 aaaaccccaatttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctaca 5224203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 409 - 446
Target Start/End: Complemental strand, 6468298 - 6468261
Alignment:
Q  409 ttctctgacttctcactttctccccttttctcccaaaa 446  Q
    |||||||||||||||||||||||| |||||||||||||    
T  6468298 ttctctgacttctcactttctccctttttctcccaaaa 6468261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 402 - 463
Target Start/End: Original strand, 24547298 - 24547358
Alignment:
Q  402 tcttctcttctctgacttctcactttctccccttttctcccaaaaacagtttctacgtattc 463  Q
    ||||| ||||||||||||||||| ||||| | |||||| ||||||| |||||||||||||||    
T  24547298 tcttcccttctctgacttctcacattctcactttttct-ccaaaaatagtttctacgtattc 24547358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 287
Target Start/End: Complemental strand, 13522408 - 13522360
Alignment:
Q  239 tttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaa 287  Q
    ||||||||||||||| |  || |||||||||||||||||||||||||||    
T  13522408 tttcaacaatcaattctataaattaaccctaatttctataacatcaaaa 13522360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 26054674 - 26054606
Alignment:
Q  126 ccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctaca 194  Q
    |||||| ||| | ||||| | |||||||| |||||||  | ||||||||||||||||||||||||||||    
T  26054674 ccaaaagccccaatttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctaca 26054606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 463
Target Start/End: Original strand, 48631435 - 48631494
Alignment:
Q  404 ttctcttctctgacttctcactttctccccttttctcccaaaaacagtttctacgtattc 463  Q
    ||||||||||  ||||||||||||||||| |||||||| ||||   ||||||||||||||    
T  48631435 ttctcttctccaacttctcactttctccctttttctcctaaaagttgtttctacgtattc 48631494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 15566845 - 15566898
Alignment:
Q  401 ctcttctcttctct-gacttctcactttctccccttttctcccaaaaacagtttc 454  Q
    |||||||||||||| ||||||||||||||| |||||||||| ||||| |||||||    
T  15566845 ctcttctcttctcttgacttctcactttct-cccttttctctcaaaagcagtttc 15566898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 209 - 251
Target Start/End: Complemental strand, 24177927 - 24177885
Alignment:
Q  209 ccttacgttaattcaatgaattacctactctttcaacaatcaa 251  Q
    ||||||||||||||||||  || ||||||||||||||||||||    
T  24177927 ccttacgttaattcaatggtttgcctactctttcaacaatcaa 24177885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 43549893 - 43549819
Alignment:
Q  128 aaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 202  Q
    ||||| |||| ||||| | |||||||| |||||||  | |||||||| |||||||| ||||||||||| ||||||    
T  43549893 aaaaaaccaaatttcatctacccaaatcccaaatttgataggaaacttaacctatgattattctacaacctgaac 43549819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 441
Target Start/End: Original strand, 6820282 - 6820323
Alignment:
Q  401 ctcttctcttctct-gacttctcactttctccccttttctcc 441  Q
    |||||||||||||| |||||||||||||||||| ||||||||    
T  6820282 ctcttctcttctcttgacttctcactttctccctttttctcc 6820323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 254
Target Start/End: Complemental strand, 13522530 - 13522462
Alignment:
Q  185 ttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaattt 254  Q
    ||||||||||| |||||| ||| | |||| ||||||||| || |||||||||||||| ||| ||||||||    
T  13522530 ttattctacaacctgaacatcaattcttatgttaattcattggattacctactcttt-aacgatcaattt 13522462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 446
Target Start/End: Complemental strand, 17518823 - 17518779
Alignment:
Q  402 tcttctcttctct-gacttctcactttctccccttttctcccaaaa 446  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||    
T  17518823 tcttctcttctcttgacttctcactttct-cccttttctcccaaaa 17518779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 446
Target Start/End: Complemental strand, 17533685 - 17533641
Alignment:
Q  402 tcttctcttctct-gacttctcactttctccccttttctcccaaaa 446  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||    
T  17533685 tcttctcttctcttgacttctcactttct-cccttttctcccaaaa 17533641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 337 - 408
Target Start/End: Original strand, 17541456 - 17541525
Alignment:
Q  337 attaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctc 408  Q
    |||| |||| ||||||| ||||||||||||| ||| | |||  |||||||||| ||| ||||||||||||||    
T  17541456 attagagaaagttagtcccacccttaccttaaattagatga--tcagactctacaagattgctcctcttctc 17541525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 258 - 290
Target Start/End: Complemental strand, 50755365 - 50755333
Alignment:
Q  258 aatttaaccctaatttctataacatcaaaacta 290  Q
    |||| ||||||||||||||||||||||||||||    
T  50755365 aattaaaccctaatttctataacatcaaaacta 50755333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1939 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 189 - 606
Target Start/End: Original strand, 1 - 416
Alignment:
Q  189 tctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaac 288  Q
    |||||||  ||||| ||| | |||| ||||||||  || ||||||||||||||||||||||||||||  | ||||||||||| |||||||||||||||||    
T  1 tctacaacatgaacatcaattcttatgttaattctttggattacctactctttcaacaatcaattttcaattttaaccctaacttctataacatcaaaac 100  T
Q  289 tattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactct 388  Q
    |||||||||||||||  | ||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||| |||| |||||| ||||||    
T  101 tattaacaactacaaattaaaaccctttttcagaaccatatactaatgattaaagaaggttagtcccacccttaccttagaatggtcgaattcggactct 200  T
Q  389 ataagcttgctcctcttctcttctctgacttctcactttctccccttttctcccaaaaacagtttctacgtattctgactttctaatttgttgtaaccct 488  Q
    | ||| |||||| |||||||||| |||||||||||||||||||  ||||||||||||| || | |  |||| |||||||| |||| |||||||||||| |    
T  201 acaagtttgctcatcttctcttcactgacttctcactttctccatttttctcccaaaagcactct-aacgtgttctgactctctattttgttgtaaccat 299  T
Q  489 aattctctaatggtctcatctatttataatcactatctgagtttgtttttcacttaatctctttgattataaacctacataatcttccttattccaattc 588  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||| | |||||||||||||||||| || |||||||||||||    
T  300 aattctctaatggtctcatctatttataatcactaactgtgtttgtttctcacttaatctctctcattataaacctacataat-tttcttattccaattc 398  T
Q  589 tacccttatgcctaatta 606  Q
    | ||||||||||| ||||    
T  399 tgcccttatgcctcatta 416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 218; Significance: 1e-119; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 12 - 447
Target Start/End: Complemental strand, 127699 - 127263
Alignment:
Q  12 gagtagaacactcaccngttgcgagttgatatcgaagtcactcgcaaggcgaacaagatcacccgccgtggtgagcgatgacaaacagttctacgggaag 111  Q
    ||||||||||||| ||  ||||||||||| ||||||||||||||||||| || ||||| ||| |||||||| ||||||||||| ||||||||||||||||    
T  127699 gagtagaacactcgccc-ttgcgagttgacatcgaagtcactcgcaaggtgatcaagaacactcgccgtggcgagcgatgacagacagttctacgggaag 127601  T
Q  112 aaatctattttttcccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattcct 211  Q
    ||| || ||||   |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  127600 aaacctgttttcagccaaaaacccaattttcaaccaccaaaatcccaaattcaaaaggaaactcaacctatgtttattctacaatttgaacctcattcct 127501  T
Q  212 tacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaacta--ttaacaactacaagcttaa 309  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||    |||||| ||| | ||||    
T  127500 tacgttaattcaatggtttacctactctttcaacaatcaattttgcaaagtaaccctaatctctataacatcaaaactaacaaaacaacaacatg-ttaa 127402  T
Q  310 accctttttcagaactatatact-catgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctc 408  Q
    |||| |||| ||||  ||| | | ||| |||| |||| | ||||| ||||||||||||||||| | ||| | ||||||||| ||||||||||||||||||    
T  127401 acccctttttagaatcatacaatccattattagagaaagctagtcccacccttaccttagattagatgattacagactctacaagcttgctcctcttctc 127302  T
Q  409 -ttctctgacttctcactttctccccttttctcccaaaaa 447  Q
     ||||||||||||||||||||| | |||||||||||||||    
T  127301 tttctctgacttctcactttct-ctcttttctcccaaaaa 127263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 205; Significance: 1e-112; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 158 - 546
Target Start/End: Original strand, 9622330 - 9622703
Alignment:
Q  158 aaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaattttgc 257  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9622330 aaatttaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatggattacctactctttcaacaatcaattttgc 9622429  T
Q  258 aatttaaccctaatttctataacatcaaaacta--ttaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtct 354  Q
    |||||||||||||||||||||||||||||||||    |||||| ||| | |||||||| |||| ||||  | |  || ||| |||| |||| | |||||     
T  9622430 aatttaaccctaatttctataacatcaaaactaacaaaacaacaacatg-ttaaacccctttttagaatcagacaacccattattagagaaagctagtcc 9622528  T
Q  355 cacccttaccttagattggttgaattcagactctataagcttgctcctcttctcttctctgacttctcactttctccccttttctcccaaaaacagtttc 454  Q
    |||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||        
T  9622529 cacccttaccttagattgattgaattcagactctacaagtttgctcctcttctcttctctaacttctcactttctccctttttctcccaaaagcag---- 9622624  T
Q  455 tacgtattctgactttctaatttgttgtaaccctaattctctaatggtctcatctatttataatcactatctgagtttgtttttcacttaat 546  Q
                 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  9622625 -------------tttctaatttgttgtaaccctaattctctaatgatctcatctatttataatcactatctgagtttgtttctcacttaat 9622703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 215 - 550
Target Start/End: Original strand, 13165033 - 13165381
Alignment:
Q  215 gttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactattaacaactacaagcttaaaccct 314  Q
    ||||||||| || ||| ||||| |||||||||||||| ||| ||||| ||  |||| ||||||||||||||||||||||||||||| ||  |||| ||||    
T  13165033 gttaattcattggatttcctacactttcaacaatcaaattt-caattaaaatctaacttctataacatcaaaactattaacaactataaaattaacccct 13165131  T
Q  315 ttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctcttctct 414  Q
    |||||| ||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||| ||| ||||||||||||||||||||    
T  13165132 ttttcacaatcctatactcatgattaaagaaggttagtcccacccttaccttagattggttgaatttggactctacaagtttgctcctcttctcttctct 13165231  T
Q  415 gacttctcactttctccccttttctcccaaaaacagtttcta--------------cgtattctgactttctaatttgttgtaaccctaattctctaatg 500  Q
    ||||||||| ||||| ||||||||||||||||||||||||||               |||||||||||||||||||||||||||||||||||||||||||    
T  13165232 gacttctcaatttcttcccttttctcccaaaaacagtttctatgtattctgtattctgtattctgactttctaatttgttgtaaccctaattctctaatg 13165331  T
Q  501 gtctcatctatttataatcactatctgagtttgtttttcacttaatctct 550  Q
    || |||||||||||||||||||| |||||||||||| |||||||||||||    
T  13165332 gtttcatctatttataatcactaactgagtttgtttctcacttaatctct 13165381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 125 - 381
Target Start/End: Original strand, 14477442 - 14477697
Alignment:
Q  125 cccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaa 224  Q
    |||| |||||| | ||||||| ||||||||||||||||  | |||||||   || |||  |||||||||||||||||| ||| |   || |||||||||     
T  14477442 cccagaaaccccaatttcaactacccaaattccaaatttgacaggaaacattacttattgttattctacaatctgaacatcaatttctatgttaattcat 14477541  T
Q  225 tgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaac 324  Q
    || ||||||||| |||||||||||||| ||| |||||||||||||| |||||||||||||||||||| ||| |||||||| | ||||||||||||||||     
T  14477542 tggattacctacactttcaacaatcaaattt-caatttaaccctaacttctataacatcaaaactatcaacgactacaagatcaaaccctttttcagaat 14477640  T
Q  325 tatatactcatgattaaagaaggttagtctcacccttaccttagattggttgaattc 381  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||    
T  14477641 tatatactcatgattaaagaaggttagtgccacccttaccttagattggttaaattc 14477697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 141 - 430
Target Start/End: Original strand, 18462849 - 18463139
Alignment:
Q  141 tcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctt 240  Q
    ||||| |||||||| |||||||  | |||||||   ||||||  || ||||||||||||||| ||| |  | | ||||||||| || ||||||||| |||    
T  18462849 tcaactacccaaatcccaaatttgacaggaaacattacctattgttgttctacaatctgaacatcaattttcatgttaattcattggattacctacactt 18462948  T
Q  241 tcaacaatcaattttgcaatttaac-cctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactatatactcatgatt 339  Q
    ||||||||||| || | |||||||  ||||| || |||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||    
T  18462949 tcaacaatcaaatt-gtaatttaaaacctaacttttataacatcaaaactattaacaactacaaaattaaaccctttttcagaattatatactcatgatt 18463047  T
Q  340 aaagaaggttagtctcacccttaccttagattggttgaattc-agactctataagcttgctcctcttctcttctctgacttctcactttctc 430  Q
    |||||||||||||| |||| |||||||||||||||| |||||   |||||| |||||| | | |||||| ||||||||||||||||||||||    
T  18463048 aaagaaggttagtcccacctttaccttagattggttaaattctcaactctacaagctttcccttcttcttttctctgacttctcactttctc 18463139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 349 - 550
Target Start/End: Original strand, 10273417 - 10273602
Alignment:
Q  349 tagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctctt-ctctgacttctcactttctccccttttctcccaaaaa 447  Q
    ||||| ||||||||||||||||| |  || ||||||||||| |||||||||||||||||||| |||||||||||||||||||||  |||||||||||||     
T  10273417 tagtcccacccttaccttagattagacgatttcagactctacaagcttgctcctcttctctttctctgacttctcactttctccatttttctcccaaaag 10273516  T
Q  448 cagtttctacgtattctgactttctaatttgttgtaaccctaattctctaatggtctcatctatttataatcactatctgagtttgtttttcacttaatc 547  Q
    |||||||                 ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||| |    
T  10273517 cagtttc-----------------taatttgttgtaaccctaattctttaatggtctcatctatttataatcactaactgagtttgtttctcacttaagc 10273599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 262 - 464
Target Start/End: Original strand, 25513797 - 25514012
Alignment:
Q  262 taaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcaccct 360  Q
    |||||||||||||||||||||||||||||  |||||||||||  |||||||||||||||||| ||||  |||||| |||| |||| | ||||| |||| |    
T  25513797 taaccctaatttctataacatcaaaactaacaacaactacaatgttaaaccctttttcagaattatacaactcattattagagaaagctagtcccaccat 25513896  T
Q  361 taccttagattggttgaattcagactctataagcttgctcc--------------tcttctcttctctgacttctcactttctccccttttctcccaaaa 446  Q
    ||||||||||| | |||  |||||||||| ||| |||||||              ||||||||||||||||||||||||||||||  |||||||||||||    
T  25513897 taccttagattagatga--tcagactctacaagattgctcctcttctcacaagattcttctcttctctgacttctcactttctccatttttctcccaaaa 25513994  T
Q  447 acagtttctacgtattct 464  Q
     |||||||||||||||||    
T  25513995 gcagtttctacgtattct 25514012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 247 - 447
Target Start/End: Original strand, 55583126 - 55583332
Alignment:
Q  247 atcaattttgcaatttaaccctaatttctataacatcaaaactattaa--caactacaagcttaaaccctttttcagaactatata-ctcatgattaaag 343  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||  |||| ||| | |||||||| |||| | ||  ||| | | ||| |||| ||    
T  55583126 atcaattttgcaatttaaccctaatttctataacatcaaaactaacaaaacaacaacatg-ttaaacccctttttataatcatacaacccattattagag 55583224  T
Q  344 aaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctcttctc-----tgacttctcactttctccccttttc 438  Q
    || | ||||| |||||||||||||||| |||||||||| ||||||| ||| |||||||||||||||||||     |||||||||||||||| ||||||||    
T  55583225 aaagctagtcccacccttaccttagataggttgaattcggactctacaagtttgctcctcttctcttctcttctttgacttctcactttct-cccttttc 55583323  T
Q  439 tcccaaaaa 447  Q
    |||||||||    
T  55583324 tcccaaaaa 55583332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 228 - 377
Target Start/End: Original strand, 12623229 - 12623378
Alignment:
Q  228 attacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaacta 326  Q
    |||| |||||||||| ||||||||||||    |  |||||||||| ||| ||||||||||| |||||||||||||||| |||||||||||||||| | ||    
T  12623229 attatctactctttctacaatcaattttagtttcaaaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 12623327  T
Q  327 tatactcatgattaaagaaggttagtctcacccttaccttagattggttga 377  Q
     ||||  |||||||||||||||||||| |||||||||||||||||| ||||    
T  12623328 catacctatgattaaagaaggttagtcccacccttaccttagattgattga 12623378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 262 - 372
Target Start/End: Original strand, 14631081 - 14631192
Alignment:
Q  262 taaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcaccct 360  Q
    |||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||| ||||  || ||| |||| |||| | ||||||||||||    
T  14631081 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcaccct 14631180  T
Q  361 taccttagattg 372  Q
    ||||||||||||    
T  14631181 taccttagattg 14631192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 263 - 377
Target Start/End: Complemental strand, 19566022 - 19565908
Alignment:
Q  263 aaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcaccctt 361  Q
    |||||||||| ||| ||||||||||| |||||||||||||||| |||||||||||||||| | || ||||| |||||||||||||||||||  |||||||    
T  19566022 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtaccaccctt 19565924  T
Q  362 accttagattggttga 377  Q
    ||||||||||| ||||    
T  19565923 accttagattgattga 19565908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 9622205 - 9622308
Alignment:
Q  10 gcgagtagaacactcaccngttgcgagttgatatcgaagtcactcgcaaggcgaacaagatcacccgccgtggtgagcgatgacaaacagttctacggga 109  Q
    |||||||||||||||  | |||||||||||| ||||||||||||||| |||||||||||||||| |||||||| ||||||||||| ||| |||||| |||    
T  9622205 gcgagtagaacactcgtc-gttgcgagttgacatcgaagtcactcgcgaggcgaacaagatcactcgccgtggcgagcgatgacagacaattctacagga 9622303  T
Q  110 agaaa 114  Q
    |||||    
T  9622304 agaaa 9622308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 228 - 371
Target Start/End: Complemental strand, 33243433 - 33243290
Alignment:
Q  228 attacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaacta 326  Q
    |||| |||||||||| ||||||||||||    |  |||||||||| ||| ||||||||||| |||||||||||||||| ||||||||| |||||  | ||    
T  33243433 attatctactctttctacaatcaattttagtttcaaaccctaatt-ctacaacatcaaaacctattaacaactacaagattaaaccctatttcaagatta 33243335  T
Q  327 tatactcatgattaaagaaggttagtctcacccttaccttagatt 371  Q
     ||||| |||||||||||| |||||||||||||||||||||||||    
T  33243334 catacttatgattaaagaatgttagtctcacccttaccttagatt 33243290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 263 - 368
Target Start/End: Complemental strand, 2424492 - 2424386
Alignment:
Q  263 aaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcaccctt 361  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| || ||||  ||| |  |||| |||| |||||||||||||||    
T  2424492 aaccctaatttctataacatcaaaactaataacaactacaagattaaaccctttttcaaaattatacaacttagaattagagaaagttagtctcaccctt 2424393  T
Q  362 accttag 368  Q
    |||||||    
T  2424392 accttag 2424386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 210 - 320
Target Start/End: Original strand, 20150721 - 20150830
Alignment:
Q  210 cttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaa-ctattaacaactacaagctta 308  Q
    |||||||||||||||||  |||||||||||||||||||| || ||  |||| |||||||||| ||| ||||||||||| ||||||||||||||||| |||    
T  20150721 cttacgttaattcaatggtttacctactctttcaacaattaaatt--caatataaccctaatctctttaacatcaaaacctattaacaactacaaggtta 20150818  T
Q  309 aaccctttttca 320  Q
    || |||||||||    
T  20150819 aatcctttttca 20150830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 147 - 290
Target Start/End: Original strand, 16296703 - 16296846
Alignment:
Q  147 acccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaaca 246  Q
    |||||||| |||||||  | |||||||| |||||||| |||||| |||| ||||||  || |  |||| ||||||||  | |||||||||||||||||||    
T  16296703 acccaaatcccaaatttgataggaaacttaacctatgattattcaacaacctgaacaccaattattaccttaattcatcggattacctactctttcaaca 16296802  T
Q  247 atcaattttgcaattt--aaccctaatttctataacatcaaaacta 290  Q
    |||||||||  |||||  ||||||||||||||||||||||||||||    
T  16296803 atcaatttt--aatttcaaaccctaatttctataacatcaaaacta 16296846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 263 - 408
Target Start/End: Original strand, 40230254 - 40230397
Alignment:
Q  263 aaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcaccctt 361  Q
    |||||||||| ||| ||||||||||| |||||||||||||||  |||||||||||||||  | || ||||| |||||||||||| ||||||| |||||||    
T  40230254 aaccctaatt-ctacaacatcaaaacctattaacaactacaatgttaaaccctttttcaagattacatacttatgattaaagaaagttagtcccaccctt 40230352  T
Q  362 accttagattggttgaattcagactctataagcttgctcctcttctc 408  Q
    |||||||||| | || ||| | |||||| ||| ||||||||||||||    
T  40230353 accttagattagatg-attga-actctacaagattgctcctcttctc 40230397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 263 - 372
Target Start/End: Complemental strand, 44023707 - 44023598
Alignment:
Q  263 aaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcaccctt 361  Q
    |||||||||| ||| ||||||||||| || |||||| |||||| |||||||||||||||  | || ||||| |||||||||||||||||||| |||||||    
T  44023707 aaccctaatt-ctacaacatcaaaacctactaacaagtacaaggttaaaccctttttcaagattacatacttatgattaaagaaggttagtcgcaccctt 44023609  T
Q  362 accttagattg 372  Q
    |||||||||||    
T  44023608 accttagattg 44023598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 257 - 361
Target Start/End: Complemental strand, 45314194 - 45314089
Alignment:
Q  257 caatttaaccctaatttctataacatcaaaactattaacaactacaagc-ttaaaccctttttcagaactatatactcatgattaaagaaggttagtctc 355  Q
    |||| |||||||||| ||||||||||||||||||  |||||||||||   |||||||||||||||||| || ||||| |||||||| ||||||||||||     
T  45314194 caatctaaccctaatctctataacatcaaaactaacaacaactacaaatgttaaaccctttttcagaattacatacttatgattaatgaaggttagtcta 45314095  T
Q  356 accctt 361  Q
    ||||||    
T  45314094 accctt 45314089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 257 - 368
Target Start/End: Complemental strand, 26921620 - 26921508
Alignment:
Q  257 caatttaaccctaatttctataacatcaaaactattaacaactacaagc-ttaaaccctttttcagaactatatactcatgattaaagaaggttagtctc 355  Q
    |||| |||||||||| ||||| ||||||||||||  |||||||||||   |||||||||||||||||| || ||||| |||||||| |||||||||||      
T  26921620 caatctaaccctaatctctatgacatcaaaactaacaacaactacaaatgttaaaccctttttcagaattacatacttatgattaatgaaggttagtcct 26921521  T
Q  356 acccttaccttag 368  Q
    |||||||||||||    
T  26921520 acccttaccttag 26921508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 126 - 253
Target Start/End: Complemental strand, 10694486 - 10694360
Alignment:
Q  126 ccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaat 225  Q
    |||||| ||| | ||||| | |||||||| |||||||  | ||||||||||||||||||||||||||||  |||||| ||| | |||| ||||||||| |    
T  10694486 ccaaaagccccaatttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcatt 10694387  T
Q  226 gaattacctactctttcaacaatcaatt 253  Q
    | |||||||||||||| |||||||||||    
T  10694386 ggattacctactcttt-aacaatcaatt 10694360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 209 - 372
Target Start/End: Complemental strand, 15239974 - 15239811
Alignment:
Q  209 ccttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactattaacaacta-caagctt 307  Q
    ||||||||||||||||||  ||||||||| |||||||||| || ||  |||| |||||||||| |||||||| ||||||| |   |||||||  ||| ||    
T  15239974 ccttacgttaattcaatggtttacctactttttcaacaattaaatt--caatctaaccctaatctctataacctcaaaaccaacgacaactataaaggtt 15239877  T
Q  308 aaaccctttttcagaactata-tactcatgattaaagaaggttagtctcacccttaccttagattg 372  Q
    |||||||||||||||  ||||  | |||| |||| |||| | ||||||||||||||||||||||||    
T  15239876 aaaccctttttcagatttatacaattcattattagagaaagctagtctcacccttaccttagattg 15239811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 263 - 368
Target Start/End: Original strand, 46741147 - 46741252
Alignment:
Q  263 aaccctaatttctataacatcaaaacta-ttaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcaccctt 361  Q
    |||||||||| ||| ||||||||||| | |||||||||||||| |||||||||||||||| | || ||| | |||||||||||||||||||| ||| |||    
T  46741147 aaccctaatt-ctacaacatcaaaaccaattaacaactacaaggttaaaccctttttcaggattacatatttatgattaaagaaggttagtcccacactt 46741245  T
Q  362 accttag 368  Q
    |||||||    
T  46741246 accttag 46741252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 126 - 253
Target Start/End: Complemental strand, 10908252 - 10908126
Alignment:
Q  126 ccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaat 225  Q
    |||||| ||| | ||||| | ||||||||  ||||||  | ||||||||||||||||||||||||||||  |||||| ||| | |||| ||||||| | |    
T  10908252 ccaaaagccccaatttcatcaacccaaataacaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattaatt 10908153  T
Q  226 gaattacctactctttcaacaatcaatt 253  Q
    |||||||||||||||| |||||||||||    
T  10908152 gaattacctactcttt-aacaatcaatt 10908126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 126 - 253
Target Start/End: Original strand, 15008779 - 15008905
Alignment:
Q  126 ccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaat 225  Q
    |||||| ||| | ||||| | |||||||| |||||||  | ||||||||||||||||||||||||||||  |||||| | | | |||| ||||||||| |    
T  15008779 ccaaaagccccaatttcatcaacccaaatcccaaattttataggaaactcaacctatgtttattctacagcctgaactttaattcttatgttaattcatt 15008878  T
Q  226 gaattacctactctttcaacaatcaatt 253  Q
    |||||||| ||||||| |||||||||||    
T  15008879 gaattaccaactcttt-aacaatcaatt 15008905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 126 - 253
Target Start/End: Original strand, 40620343 - 40620469
Alignment:
Q  126 ccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaat 225  Q
    |||||| ||| | ||||| | |||||||| |||||||  | |||||||||||||||||||||| ||||   |||||| ||| | |||| ||||||||| |    
T  40620343 ccaaaagccccaatttcatcaacccaaatcccaaatttgagaggaaactcaacctatgtttatcctacggcctgaacttcaattcttatgttaattcatt 40620442  T
Q  226 gaattacctactctttcaacaatcaatt 253  Q
    |||||||||||||||| |||||||||||    
T  40620443 gaattacctactcttt-aacaatcaatt 40620469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 275 - 372
Target Start/End: Original strand, 16296897 - 16296995
Alignment:
Q  275 tataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcacccttaccttagattg 372  Q
    ||||||||||||||||  ||||||||| || |||||||||||||||||| ||||  |||||| |||| |||| | ||||| ||||||||||||||||||    
T  16296897 tataacatcaaaactaacaacaactaccaggttaaaccctttttcagaattatacaactcattattagagaaagctagtcccacccttaccttagattg 16296995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 26446153 - 26446219
Alignment:
Q  262 taaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata 328  Q
    |||||||||||||||||||||||||||||  |||||||||||| ||||||| |||||||||| ||||    
T  26446153 taaccctaatttctataacatcaaaactaacaacaactacaagattaaaccatttttcagaattata 26446219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 228 - 414
Target Start/End: Original strand, 33186815 - 33187000
Alignment:
Q  228 attacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaacta 326  Q
    |||| |||||||||| ||||||||||||    |  |||||||||| ||| ||||||||||| |||||||||| ||||| |||||||||||||||||| ||    
T  33186815 attatctactctttctacaatcaattttagtttcaaaccctaatt-ctacaacatcaaaacctattaacaaccacaaggttaaaccctttttcagaatta 33186913  T
Q  327 ta-tactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctcttctct 414  Q
    ||  || ||| |||| |||| | ||||||||||| ||||||| ||| | |||  || ||||||| ||  ||||||||| ||||||||||    
T  33186914 tacaacccattattagagaaagctagtctcacccctaccttaaattagatga--tcggactctacaaaattgctcctcctctcttctct 33187000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 36038622 - 36038699
Alignment:
Q  126 ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 202  Q
    |||||||||||||||| || |||||||||  |||||||  | ||||||||||||||||||||||||||||||||||||    
T  36038622 ccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaac 36038699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 49547184 - 49547107
Alignment:
Q  126 ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 202  Q
    |||||||||||||||| || |||||||||  |||||||  | ||||||||||||||||||||||||||||||||||||    
T  49547184 ccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaac 49547107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 407 - 458
Target Start/End: Complemental strand, 44928100 - 44928049
Alignment:
Q  407 tcttctctgacttctcactttctccccttttctcccaaaaacagtttctacg 458  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  44928100 tcttctctgacttctcattttctccccttttctcccaaaaacagtttgtacg 44928049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 278 - 371
Target Start/End: Original strand, 9638972 - 9639066
Alignment:
Q  278 aacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcacccttaccttagatt 371  Q
    |||||||||| ||| |||||||||||| |||||||||||||||||| || |  |||||| |||| |||| | ||||| |||||||||||||||||    
T  9638972 aacatcaaaattatcaacaactacaaggttaaaccctttttcagaattacacaactcattattagagaaagctagtcccacccttaccttagatt 9639066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 15534933 - 15535010
Alignment:
Q  126 ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 202  Q
    |||||||||||||||| || |||||||||  |||||||  | |||||||||||| |||||||||||||||||||||||    
T  15534933 ccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctacaatctgaac 15535010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 558 - 606
Target Start/End: Original strand, 14477813 - 14477861
Alignment:
Q  558 taaacctacataatcttccttattccaattctacccttatgcctaatta 606  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  14477813 taaacctacataatcttccttattccaattctgcccttatgcctcatta 14477861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 128 - 287
Target Start/End: Original strand, 35660701 - 35660861
Alignment:
Q  128 aaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatga 227  Q
    |||||||||| ||||| | |||||||| |||||||  | |||||||| ||| |||| ||||||||||| ||||||  || |  |||| ||| ||||  |     
T  35660701 aaaaacccaaatttcatctacccaaatcccaaatttgataggaaacttaacatatgattattctacaacctgaacaccaattattaccttacttcatcgg 35660800  T
Q  228 attacctactctttcaacaatcaattttgcaatttaaccctaatttctataa-catcaaaa 287  Q
    |||||||||||| |||||||||||||||  | |  ||||||||||||| ||| ||||||||    
T  35660801 attacctactctctcaacaatcaattttaaattcaaaccctaatttctctaatcatcaaaa 35660861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 126 - 195
Target Start/End: Original strand, 33849554 - 33849624
Alignment:
Q  126 ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaa 195  Q
    |||||||||||||||| || |||||||||  |||||||  | |||||||||||||||||||||||||||||    
T  33849554 ccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaa 33849624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 409 - 453
Target Start/End: Original strand, 15191285 - 15191329
Alignment:
Q  409 ttctctgacttctcactttctccccttttctcccaaaaacagttt 453  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||    
T  15191285 ttctctgacttctcactttctccctttttctcccaaaagcagttt 15191329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 128 - 251
Target Start/End: Original strand, 14549463 - 14549586
Alignment:
Q  128 aaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatga 227  Q
    |||||||||| ||||| | |||||||| |||||||  | |||||||| ||| |||| ||||||||||| ||||||  || |  |||| ||||||||        
T  14549463 aaaaacccaaatttcatctacccaaatcccaaatttgataggaaacttaacatatgattattctacaacctgaacaccaattattaccttaattcatcag 14549562  T
Q  228 attacctactctttcaacaatcaa 251  Q
    ||||| ||||||||||||||||||    
T  14549563 attacatactctttcaacaatcaa 14549586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 28386055 - 28386132
Alignment:
Q  126 ccaaaaacccaa-ttttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 202  Q
    |||||||||||| |||||| |||||||||  |||||||  | |||||||| |||||||| ||||||||||| ||||||    
T  28386055 ccaaaaacccaaattttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaac 28386132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 408
Target Start/End: Complemental strand, 12424397 - 12424251
Alignment:
Q  263 aaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccct--ttttcagaactata-tactcatgattaaagaaggttagtctcacc 358  Q
    |||||||||| ||| ||||||||||| |||||||||||||||  |||||||||  ||||||||| ||||  || ||| |||| |||| | ||||| ||||    
T  12424397 aaccctaatt-ctacaacatcaaaacctattaacaactacaaagttaaaccctttttttcagaattatacaacccattattagagaaagctagtcccacc 12424299  T
Q  359 cttaccttagattggttgaattcagactctataagcttgctcctcttctc 408  Q
    ||||||||| ||| | |||  || ||||||| ||| |||||| |||||||    
T  12424298 cttaccttaaattagatga--tcggactctacaagattgctcttcttctc 12424251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 432
Target Start/End: Original strand, 14477732 - 14477763
Alignment:
Q  401 ctcttctcttctctgacttctcactttctccc 432  Q
    ||||||||||||||||||||||||||||||||    
T  14477732 ctcttctcttctctgacttctcactttctccc 14477763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 315 - 377
Target Start/End: Original strand, 3515797 - 3515859
Alignment:
Q  315 ttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagattggttga 377  Q
    |||||||||  ||| ||||| |||||  ||| |||||||||||||||||||||||||| ||||    
T  3515797 ttttcagaatcatagactcaagattattgaatgttagtctcacccttaccttagattgattga 3515859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 210 - 248
Target Start/End: Original strand, 3838026 - 3838064
Alignment:
Q  210 cttacgttaattcaatgaattacctactctttcaacaat 248  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  3838026 cttacgttaattcaatggtttacctactctttcaacaat 3838064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 33243245 - 33243192
Alignment:
Q  401 ctcttctcttctct-gacttctcactttctccccttttctcccaaaaacagtttc 454  Q
    |||||||||||||| ||||||||||||||| |||||||||| ||||| |||||||    
T  33243245 ctcttctcttctcttgacttctcactttct-cccttttctctcaaaagcagtttc 33243192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 266 - 320
Target Start/End: Original strand, 35660906 - 35660960
Alignment:
Q  266 cctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttca 320  Q
    |||||||  ||||||||||||||||  |||||||||||| ||||||| |||||||    
T  35660906 cctaattcatataacatcaaaactaacaacaactacaaggttaaaccatttttca 35660960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 446
Target Start/End: Original strand, 14186145 - 14186190
Alignment:
Q  401 ctcttctcttctctgacttctcactttctccccttttctcccaaaa 446  Q
    |||||||||||||| ||||||||||||||||| ||| |||| ||||    
T  14186145 ctcttctcttctctcacttctcactttctcccttttactccaaaaa 14186190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 337 - 408
Target Start/End: Original strand, 19022366 - 19022435
Alignment:
Q  337 attaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctc 408  Q
    |||| |||| |||||||||||| |||||||||||| | |||  || ||||||| ||| ||||||||||||||    
T  19022366 attagagaaagttagtctcacctttaccttagattagatga--tcggactctacaagattgctcctcttctc 19022435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 158; Significance: 9e-84; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 158; E-Value: 9e-84
Query Start/End: Original strand, 263 - 606
Target Start/End: Complemental strand, 40268 - 39900
Alignment:
Q  263 aaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactat---atactcatgattaaagaaggttagtctcaccc 359  Q
    |||||||| |||||||||||||||||||| |||||||||| | ||||||||||||| |||| |||   ||||||||||||| |||||||||||| |||||    
T  40268 aaccctaacttctataacatcaaaactatcaacaactacatggttaaacccttttttagaattattatatactcatgattagagaaggttagtcccaccc 40169  T
Q  360 ttaccttagattggttgaattcagact-ctataagcttgctcctcttctc--------------ttctctgacttctcactttctccccttttctcccaa 444  Q
    |||||||||||||||| || || || | ||| |||||| | | |||||||              |||||||||||||||||||||||| |||||||||||    
T  40168 ttaccttagattggttaaactctgaattctacaagctttcccttcttctcacaaagctcttttcttctctgacttctcactttctccctttttctcccaa 40069  T
Q  445 aaacagtttctac-------gtattctgactttctaatttgttgtaaccctaattctctaatggtctcatctatttataatcactatctgagtttgtttt 537  Q
    || ||||||||||       ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||     
T  40068 aagcagtttctacatattctgtattctgactttctaatttgttttaaccctaattctctaatggtctcatctatttataatcactaactgagtttgtttc 39969  T
Q  538 tcacttaatctctttgattataaacctacataatcttccttattccaattctacccttatgcctaatta 606  Q
    ||||||||||||| | ||||||||| |||||| ||||||||||||||||| | |||| |||||| ||||    
T  39968 tcacttaatctctctcattataaacttacatagtcttccttattccaattttgccctcatgcctcatta 39900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 155; Significance: 6e-82; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 12 - 375
Target Start/End: Original strand, 19646927 - 19647293
Alignment:
Q  12 gagtagaacactcaccngttgcgagttgatatcgaagtcactcgcaaggcgaacaagatcacccgccgtggtgagcgatgacaaacagttctacgggaag 111  Q
    ||||||||||||| || |||||||||||| ||||||||||||||  ||||||||| || ||| ||| ||||  |||||| ||| ||||||||||||||||    
T  19646927 gagtagaacactcgcc-gttgcgagttgacatcgaagtcactcgtgaggcgaacacgaacactcgctgtggcaagcgataacagacagttctacgggaag 19647025  T
Q  112 aaatctattttttcccaaaaa------cccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctc 205  Q
    ||| |||||||  ||||||||      |||||||| |||| ||| |||| |||||||  | |||||||   ||||||  ||||||||||| |||||| ||    
T  19647026 aaacctattttcacccaaaaaaaaaaacccaattt-caactacctaaatcccaaatttgataggaaacattacctattgttattctacaacctgaacatc 19647124  T
Q  206 attccttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactattaacaactacaagc 305  Q
    | | |||| ||||||||| || |||||||||  |||||||||||||||| ||||||||||||||| |||||||  ||||||||||||||||||||||||     
T  19647125 aattcttatgttaattcattggattacctacattttcaacaatcaattt-gcaatttaaccctaacttctatacaatcaaaactattaacaactacaaga 19647223  T
Q  306 ttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagattggtt 375  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  19647224 ttaaaccctttttcagaattatatacttatgattaaagaaggttagtctcacccataccttagattggtt 19647293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 306 - 551
Target Start/End: Complemental strand, 36734511 - 36734268
Alignment:
Q  306 ttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctctt 405  Q
    ||||||||| ||| |||| |||| || ||| |||| ||||| ||| || |||||||||||||||||| |||||||| ||||||  |||||||||||||||    
T  36734511 ttaaaccctattttagaattataaacccattattagagaag-ttaatcccacccttaccttagattgattgaattcggactctgcaagcttgctcctctt 36734413  T
Q  406 ctcttctctgacttctcactttctccccttttctcccaaaaacagtttctacgtattctgactttctaatttgttgtaaccctaattctctaatggtctc 505  Q
    ||  ||||| ||||||||||||||||| ||||||||||||| | ||||  |||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  36734412 cttctctctaacttctcactttctccctttttctcccaaaa-ctgttttcacgtgttctgactttctattttgttgtaaccctaattctctaatggtctc 36734314  T
Q  506 atctatttataatcactatctgagtttgtttttcacttaatctctt 551  Q
    || |||||||||||| || |||||||||||| ||||||||||||||    
T  36734313 atttatttataatcaatacctgagtttgtttctcacttaatctctt 36734268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 239 - 550
Target Start/End: Complemental strand, 28345115 - 28344822
Alignment:
Q  239 tttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactatata-ctcatga 337  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||  || ||| ||| | |||||||| |||| ||||  ||| | | ||| |    
T  28345115 tttcaacaatcaattttgcaaattaaccctaatttctataacatcgaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacagcccatta 28345018  T
Q  338 ttaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctcttctctgacttctcactttctcccctttt 437  Q
    ||| |||| | ||||| |||||||| ||||||| |||||||||| |||| || |   |||||||||||||||||||||||||||||||||||||  ||||    
T  28345017 ttagagaaagctagtcacacccttatcttagataggttgaattcggactgtacatatttgctcctcttctcttctctgacttctcactttctccattttt 28344918  T
Q  438 ctcccaaaaacagtttctacgtattctgactttctaatttgttgtaaccctaattctctaatggtctcatctatttataatcactatctgagtttgtttt 537  Q
    ||||||||| |||||||||                 |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||     
T  28344917 ctcccaaaagcagtttcta-----------------atttattgtaaccctaattctctaatggtctcatctatttataatcactaactgagtttgtttc 28344835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 29 - 380
Target Start/End: Complemental strand, 20006311 - 20005958
Alignment:
Q  29 gttgcgagttgatatcgaagtcactcgcaaggcgaacaagat-cacccgccgtggtgagcgatgacaaacagttctacgggaagaaatctattttttccc 127  Q
    |||||||||||| ||| ||| ||||||| |||||| |||||| ||| || ||||| ||||||||| | | || |||||||| ||||| | |||||  | |    
T  20006311 gttgcgagttgacatctaagccactcgctaggcgagcaagattcactcgtcgtggcgagcgatgatagatagctctacgggcagaaaccaattttcactc 20006212  T
Q  128 aaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattcctt--acgttaattcaat 225  Q
    |||||||| | || |||| |||||||| |||||||  | |||||||   ||||||  |||||||||||  ||||| |||||  ||  |  |||||||| |    
T  20006211 aaaaaccccaattacaactacccaaatcccaaatttgataggaaacattacctattgttattctacaacatgaacatcattttttttatattaattcatt 20006112  T
Q  226 gaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaact 325  Q
      ||||||||| |||||||||||||| || |||||| || ||||| |||||||||||||||| |||||||||| ||||  |||||||||||||||||| |    
T  20006111 cgattacctacactttcaacaatcaaatt-gcaattcaaacctaacttctataacatcaaaattattaacaacaacaaaattaaaccctttttcagaatt 20006013  T
Q  326 atatactcatgattaaagaaggttagtctcacccttaccttagattggttgaatt 380  Q
    ||| |||||||||||||||||| ||||| ||||||||||||||||||||| ||||    
T  20006012 atagactcatgattaaagaaggctagtcccacccttaccttagattggttaaatt 20005958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 125 - 473
Target Start/End: Original strand, 45535736 - 45536096
Alignment:
Q  125 cccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaa 224  Q
    ||||||| ||| | || |||| |||||||| |||||||  | |||||||   ||||||  ||||||||||| |||||| ||| |  ||| |||||||||     
T  45535736 cccaaaatccccaattacaactacccaaatcccaaatttgacaggaaacattacctattgttattctacaacctgaacatcaatttttatgttaattcat 45535835  T
Q  225 tgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaac 324  Q
    || ||||||||| |||||||||||||| || ||||||||| ||||| |||||||||| || || ||| |||||| ||||| ||||||||||||||||||     
T  45535836 tggattacctacactttcaacaatcaaatt-gcaatttaaacctaacttctataacaacagaattatcaacaacaacaagattaaaccctttttcagaat 45535934  T
Q  325 tatatactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcag-actctataagcttgctc--------------ctcttctct 409  Q
    |||| |||| ||||||||||||||||||| ||||||||||||||||||||| ||||| | | |||| |||||| | |              |||||||||    
T  45535935 tatagactcgtgattaaagaaggttagtcccacccttaccttagattggttaaattctgaattctacaagctttcccttcttctcacaaagctcttctct 45536034  T
Q  410 tctctgacttctcactttctccccttttctcccaaaaacagtttctacgtattctgactttcta 473  Q
    ||||||||||||||||||||  | ||||||||||||||| |||| ||||| |||||||| ||||    
T  45536035 tctctgacttctcactttct--ctttttctcccaaaaactgtttttacgtgttctgactctcta 45536096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 178 - 372
Target Start/End: Complemental strand, 28652740 - 28652547
Alignment:
Q  178 cctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctat 277  Q
    |||||| ||||||||| | |||||| ||| |  |||| |||||||| || |||||||||||||| |||||| || ||  |||| ||||||||||||||||    
T  28652740 cctatgattattctactacctgaacatcaattattaccttaattcattggattacctactcttttaacaattaaatt--caatctaaccctaatttctat 28652643  T
Q  278 aacatcaaaactattaacaactacaa-gcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagattg 372  Q
    |||||||||||||  ||||||||||| |  ||||||||||||||||| || ||||| |||||||| ||||||||||| ||||||||||||||||||    
T  28652642 aacatcaaaactaacaacaactacaaaggctaaaccctttttcagaattacatacttatgattaatgaaggttagtcccacccttaccttagattg 28652547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 10 - 473
Target Start/End: Original strand, 45528236 - 45528702
Alignment:
Q  10 gcgagtagaacactcaccngttgcgagttgatatcgaagtcactcgcaaggcgaacaagatcacc-cgccgtggtgagcgatgacaaacagttctacggg 108  Q
    |||||||||||||| | | |||||||||||| ||| ||| ||||||| |||||| ||||||  || |||||||| ||| ||||||| | || ||||||||    
T  45528236 gcgagtagaacact-agctgttgcgagttgacatctaagccactcgcgaggcgagcaagattccctcgccgtggcgagtgatgacagatagctctacggg 45528334  T
Q  109 aagaaatctattttttcccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcatt 208  Q
     ||||| | ||||   ||||||||||| | || |||| ||||||||| ||||||  | |||||||   ||||||  |||||||| || |||||| ||| |    
T  45528335 cagaaaccaatttccacccaaaaaccccaattacaactacccaaatttcaaatttgacaggaaacattacctattgttattctataacctgaacatcaat 45528434  T
Q  209 ccttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactattaacaactacaagctta 308  Q
      | | ||||||||| |  ||||| ||| |||||||||||||| || ||||||||| ||||| |||||||||| || || ||| |||||| ||||| |||    
T  45528435 tttaatgttaattcatttgattacatacactttcaacaatcaaatt-gcaatttaaacctaacttctataacaacagaattatcaacaacaacaagatta 45528533  T
Q  309 aaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcag-actctataagcttgctc------- 400  Q
    |||  |||||||||| |||| ||||||         ||||||||| ||||||||||||||||||||| ||||| | | |||| |||||| | |           
T  45528534 aacattttttcagaattatagactcat---------aggttagtcccacccttaccttagattggttaaattctgaattctacaagctttcccttcttct 45528624  T
Q  401 -------ctcttctcttctctgacttctcactttctccccttttctcccaaaaacagtttctacgtattctgactttcta 473  Q
           |||||||||||||||||||||||||||||  | ||||||||||||||| |||| ||||| |||||||| ||||    
T  45528625 cacaaagctcttctcttctctgacttctcactttct--ctttttctcccaaaaactgtttttacgtgttctgactctcta 45528702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 263 - 363
Target Start/End: Complemental strand, 25584367 - 25584267
Alignment:
Q  263 aaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcaccctta 362  Q
    |||||||| |||||||||||||||||||| | |||| ||||| |||||||||||||||||| |||||||||||||||||||||||||| || ||||||||    
T  25584367 aaccctaacttctataacatcaaaactatcatcaacgacaaggttaaaccctttttcagaattatatactcatgattaaagaaggttattcccaccctta 25584268  T
Q  363 c 363  Q
    |    
T  25584267 c 25584267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 10 - 149
Target Start/End: Original strand, 23800012 - 23800150
Alignment:
Q  10 gcgagtagaacactcaccngttgcgagttgatatcgaagtcactcgcaaggcgaacaagatcacccgccgtggtgagcgatgacaaacagttctacggga 109  Q
    ||||||||||||||| || ||||| |||||| ||||||||||||||| ||||||||||||||||  ||||||| ||||||||| | ||||||||| ||||    
T  23800012 gcgagtagaacactcgcc-gttgcaagttgacatcgaagtcactcgcgaggcgaacaagatcacttgccgtggcgagcgatgatagacagttctatggga 23800110  T
Q  110 agaaatctattttttcccaaaaacccaattttcaaccacc 149  Q
    ||||| || ||||  ||||||||||| | |||||||||||    
T  23800111 agaaacctgttttcccccaaaaaccccaatttcaaccacc 23800150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 128 - 290
Target Start/End: Complemental strand, 149745 - 149583
Alignment:
Q  128 aaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatga 227  Q
    |||||||||| ||||| | |||||||| |||||||  | |||||||| |||||||| |||||| |||||||||||  || |  |||| ||||||||  |     
T  149745 aaaaacccaaatttcatctacccaaatcccaaatttgataggaaacttaacctatgattattcaacaatctgaacaccaattattaccttaattcatcgg 149646  T
Q  228 attacctactctttcaacaatcaattttgcaattt--aaccctaatttctataacatcaaaacta 290  Q
    ||||||||||||||||||||||||||||  |||||  ||||||||||||||||||||||||||||    
T  149645 attacctactctttcaacaatcaatttt--aatttcaaaccctaatttctataacatcaaaacta 149583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 262 - 372
Target Start/End: Complemental strand, 21335372 - 21335261
Alignment:
Q  262 taaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcaccct 360  Q
    ||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||  || ||| |||| |||| | ||||| ||||||    
T  21335372 taaccataatttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccaccct 21335273  T
Q  361 taccttagattg 372  Q
    ||||||||||||    
T  21335272 taccttagattg 21335261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 262 - 464
Target Start/End: Original strand, 21369239 - 21369454
Alignment:
Q  262 taaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactatata-ctcatgattaaagaaggttagtctcaccct 360  Q
    ||||||||||||||||||||||||||||| ||  ||||||||| |||||||||||||||||| |||| | | |||  ||| |||| | | ||| ||||||    
T  21369239 taaccctaatttctataacatcaaaactaatataaactacaaggttaaaccctttttcagaattatacaacccattgttagagaaagcttgtcccaccct 21369338  T
Q  361 taccttagattggttgaattcagactctataagcttgctcctctt--------------ctcttctctgacttctcactttctccccttttctcccaaaa 446  Q
    ||||||||||| | |||  || ||||||| ||| |||||| ||||              ||||||||||||||||||||||||||  |||||||||||||    
T  21369339 taccttagattagatga--tcggactctacaagattgctcatcttctcacaagattcttctcttctctgacttctcactttctccttttttctcccaaaa 21369436  T
Q  447 acagtttctacgtattct 464  Q
    |||||||||| |||||||    
T  21369437 acagtttctatgtattct 21369454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 126 - 253
Target Start/End: Original strand, 25184000 - 25184126
Alignment:
Q  126 ccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaat 225  Q
    |||||| ||| | ||||| | |||||||| |||||||  | |||||||||||||||||||||||||||| ||||||| ||| | |||| ||||||||| |    
T  25184000 ccaaaagccccaatttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagtctgaacttcaattcttatgttaattcatt 25184099  T
Q  226 gaattacctactctttcaacaatcaatt 253  Q
    |||||||||||||||| |||||||||||    
T  25184100 gaattacctactcttt-aacaatcaatt 25184126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 156 - 367
Target Start/End: Complemental strand, 12626643 - 12626427
Alignment:
Q  156 ccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaatttt 255  Q
    |||||||||| |||||||||||| |||||||||||||||| |||||| ||| | |||  |||||||||  | ||||||||||||||||||||||||||||    
T  12626643 ccaaattcaataggaaactcaacttatgtttattctacaacctgaacatcaattcttctgttaattcatcggattacctactctttcaacaatcaatttt 12626544  T
Q  256 gcaatttaaccctaatttctataacatcaaaacta--ttaacaactacaagc----ttaaaccctttttcagaactatatactcatgattaaagaaggtt 349  Q
        |  || ||||||||||  |  ||||||| ||    |||||| |||| |    |||||||||||||||||| |||| ||| |||||||| |||||||    
T  12626543 agtttcaaaacctaatttctcaacaatcaaaattaacaaaacaac-acaaacgatgttaaaccctttttcagaattatacacttatgattaatgaaggtt 12626445  T
Q  350 agtctcacccttacctta 367  Q
    |||| |||||||||||||    
T  12626444 agtcccacccttacctta 12626427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 228 - 464
Target Start/End: Complemental strand, 14179867 - 14179619
Alignment:
Q  228 attacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaa-ctattaacaactacaagcttaaaccctttttcagaacta 326  Q
    |||| |||||||||| ||||||||||||    |  |||||||||| | | |||||||||| |||||||||| || |||  |||||| |||||||| | ||    
T  14179867 attatctactctttctacaatcaattttagtttcaaaccctaattcc-acaacatcaaaatctattaacaagtataaggataaaccttttttcaggatta 14179769  T
Q  327 tatactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctc--------------ttctcttct 412  Q
     |||||||||||||||||||||||||| ||||||||||||| ||| | |||  ||  |||||| ||| |||||||||              |||||||||    
T  14179768 catactcatgattaaagaaggttagtcccacccttaccttatattagatga--tcgaactctacaagattgctcctcttctcacaagattattctcttct 14179671  T
Q  413 ctgacttctcactttctccccttttctcccaaaaacagtttctacgtattct 464  Q
    || ||||||||||||||||| ||||||||||||| |||||||||||| ||||    
T  14179670 ctaacttctcactttctccctttttctcccaaaagcagtttctacgtcttct 14179619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 268 - 372
Target Start/End: Complemental strand, 21315576 - 21315471
Alignment:
Q  268 taatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcacccttacctt 366  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||  || ||| |||| |||| | ||||| ||||||||||||    
T  21315576 taatttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttacctt 21315477  T
Q  367 agattg 372  Q
    ||||||    
T  21315476 agattg 21315471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 349 - 465
Target Start/End: Original strand, 23801530 - 23801652
Alignment:
Q  349 tagtctcacccttaccttagattgg----ttgaattcagactctataagcttgctcctctt---ctcttctctgacttctcactttctccccttttctcc 441  Q
    ||||| ||||||||||||||||| |    |||||||  ||||||| |||||||||||||||   ||||||||||||||||||||||||||| ||||||||    
T  23801530 tagtcccacccttaccttagattagatgattgaatttggactctacaagcttgctcctcttcttctcttctctgacttctcactttctccctttttctcc 23801629  T
Q  442 caaaaacagtttctacgtattctg 465  Q
    | ||| ||||||||||||||||||    
T  23801630 c-aaatcagtttctacgtattctg 23801652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 263 - 366
Target Start/End: Complemental strand, 23968727 - 23968624
Alignment:
Q  263 aaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcaccctt 361  Q
    |||||||||| ||| ||||||||||| ||||||| |||||||| ||||||| |||||||| | || ||||| ||||||||||||||||||||||||||||    
T  23968727 aaccctaatt-ctacaacatcaaaacctattaacgactacaaggttaaaccttttttcaggattacatacttatgattaaagaaggttagtctcaccctt 23968629  T
Q  362 acctt 366  Q
    |||||    
T  23968628 acctt 23968624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 209 - 290
Target Start/End: Complemental strand, 25584272 - 25584190
Alignment:
Q  209 ccttacgttaattcaatgaatt-acctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaacta 290  Q
    |||||||||||||| || |||| ||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||    
T  25584272 ccttacgttaattcgataaatttacctactctttcaacaatcaattctacaaattaaccctaatttctataacatcaaaacta 25584190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 126 - 253
Target Start/End: Complemental strand, 18358208 - 18358082
Alignment:
Q  126 ccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaat 225  Q
    |||||| ||| | ||||| | |||||||| |||||||  | ||||||||||||||||||||||||||||  |||||| ||| | |||| ||||||||| |    
T  18358208 ccaaaagccccaatttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcatt 18358109  T
Q  226 gaattacctactctttcaacaatcaatt 253  Q
    ||||||| |||||||| |||||||||||    
T  18358108 gaattacatactcttt-aacaatcaatt 18358082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 126 - 253
Target Start/End: Original strand, 21915435 - 21915561
Alignment:
Q  126 ccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaat 225  Q
    |||||| ||| | ||||| | ||| |||| |||||||  | ||||||||||||||||||||||||||||  |||||| ||| | |||| ||||||||| |    
T  21915435 ccaaaagccccaatttcatcaacctaaatcccaaattttataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcatt 21915534  T
Q  226 gaattacctactctttcaacaatcaatt 253  Q
    |||||||||| ||||| |||||||||||    
T  21915535 gaattacctattcttt-aacaatcaatt 21915561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 147 - 464
Target Start/End: Complemental strand, 14183686 - 14183357
Alignment:
Q  147 acccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaaca 246  Q
    ||||||||||||||||  | ||||||||| ||||||| |||||| |||| ||||||  || |  |||   || ||||  | |||| |||| ||||| |||    
T  14183686 acccaaattccaaatttgataggaaactctacctatgattattccacaacctgaacaccaattattaaactagttcatcggattatctaccctttctaca 14183587  T
Q  247 atcaattttgcaatttaaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaa 345  Q
    |||||||||    |  |||||||||| | | ||||||||||| ||||||||| || |||  |||| | |||||||| | || ||||||||||||||||||    
T  14183586 atcaattttagtttcaaaccctaattcc-acaacatcaaaacctattaacaagtataaggataaatcttttttcaggattacatactcatgattaaagaa 14183488  T
Q  346 ggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctc--------------ttctctgacttctcactttctcc 431  Q
    |||||||| ||||||||||||| ||| | |||  || || | |||||| ||||| | ||||||              ||| |||||||| ||||||||||    
T  14183487 ggttagtcccacccttaccttaaattagatga--tcggattttataagattgcttcacttctcacaagattcttcttttcactgacttcccactttctcc 14183390  T
Q  432 ccttttctcccaaaaacagtttctacgtattct 464  Q
    | ||||||||||||| |||||||||||||||||    
T  14183389 ctttttctcccaaaagcagtttctacgtattct 14183357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 337 - 453
Target Start/End: Original strand, 17307508 - 17307623
Alignment:
Q  337 attaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctctt-ctctgacttctcactttctcccctt 435  Q
    |||| |||| ||||||| ||||||||||||||||| | |||  || | |||||  |  |||||||||||||||| |||||||||||||||||||||| ||    
T  17307508 attagagaaagttagtcccacccttaccttagattagatga--tcggtctctacgattttgctcctcttctctttctctgacttctcactttctcccttt 17307605  T
Q  436 ttctcccaaaaacagttt 453  Q
    ||||||||||| ||||||    
T  17307606 ttctcccaaaagcagttt 17307623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 209 - 290
Target Start/End: Complemental strand, 34491403 - 34491322
Alignment:
Q  209 ccttacgttaattcaatgaatt-acctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaacta 290  Q
    |||||||||||||||||| ||| || |||||||| ||||||||||||||||| |||||||||| || ||||||||||||||||    
T  34491403 ccttacgttaattcaatggatttacttactcttttaacaatcaattttgcaa-ttaaccctaaattttataacatcaaaacta 34491322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 10684173 - 10684096
Alignment:
Q  126 ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 202  Q
    |||||||||||||||| || |||||||||  |||||||  | |||||||||||| |||||||||||||||||||||||    
T  10684173 ccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctacaatctgaac 10684096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 20261971 - 20262048
Alignment:
Q  126 ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 202  Q
    |||||||||||||||| || |||||||||  |||||||  | |||||||||||| |||||||||||||||||||||||    
T  20261971 ccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctacaatctgaac 20262048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 23338640 - 23338563
Alignment:
Q  126 ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 202  Q
    |||||||||||||||| || |||||||||  |||||||  | ||||||||||||||||||||||||||||| ||||||    
T  23338640 ccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaacctgaac 23338563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 126 - 253
Target Start/End: Complemental strand, 21081210 - 21081084
Alignment:
Q  126 ccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaat 225  Q
    |||||| ||| | ||||| | |||||||| | |||||  | |||||||||||| |||||||||||||||  |||||| ||| | |||| ||||||||| |    
T  21081210 ccaaaagccccaatttcatcaacccaaatcctaaatttgataggaaactcaacttatgtttattctacagcctgaacttcaattcttatgttaattcatt 21081111  T
Q  226 gaattacctactctttcaacaatcaatt 253  Q
    |  ||||||||||||| |||||||||||    
T  21081110 gttttacctactcttt-aacaatcaatt 21081084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 368
Target Start/End: Original strand, 23610572 - 23610679
Alignment:
Q  262 taaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcaccct 360  Q
    ||||||||||||||||||||||||||| |  |||||||| ||| ||||||| ||||||| || ||||  || ||| |||| |||| | ||||| ||||||    
T  23610572 taaccctaatttctataacatcaaaacaaacaacaactagaaggttaaaccatttttcataattatacaacccattattagagaaagctagtcccaccct 23610671  T
Q  361 taccttag 368  Q
    ||||||||    
T  23610672 taccttag 23610679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 315 - 377
Target Start/End: Complemental strand, 18388242 - 18388180
Alignment:
Q  315 ttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagattggttga 377  Q
    |||||||||  ||||||||| |||||  |||||||||||||||||||||||||||||| ||||    
T  18388242 ttttcagaatcatatactcaggattattgaaggttagtctcacccttaccttagattgattga 18388180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 278 - 363
Target Start/End: Original strand, 24717981 - 24718067
Alignment:
Q  278 aacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttac 363  Q
    ||||||||||| |||| |||| |||||| |||||||| ||||||| | || ||||| |||||||||||| ||||||| |||||||||    
T  24717981 aacatcaaaacctattgacaaatacaaggttaaaccccttttcaggattacatacttatgattaaagaatgttagtcccacccttac 24718067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 1383852 - 1383768
Alignment:
Q  167 aggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaa 251  Q
    |||||||| |||||||| ||||||||||| |||||   || |  |||||||||||||  | ||||||||||||||||||||||||    
T  1383852 aggaaacttaacctatgattattctacaacctgaagaccaattattacgttaattcatcggattacctactctttcaacaatcaa 1383768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 446
Target Start/End: Original strand, 27852763 - 27852807
Alignment:
Q  402 tcttctcttctctgacttctcactttctccccttttctcccaaaa 446  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||    
T  27852763 tcttctcttctctgacttctcactttctccctttttctccaaaaa 27852807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 401 - 446
Target Start/End: Original strand, 22695319 - 22695364
Alignment:
Q  401 ctcttctcttctctgacttctcactttctccccttttctcccaaaa 446  Q
    |||||||||||||| ||||||||||||||||| |||||||| ||||    
T  22695319 ctcttctcttctcttacttctcactttctccctttttctccaaaaa 22695364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 432
Target Start/End: Original strand, 19647334 - 19647365
Alignment:
Q  401 ctcttctcttctctgacttctcactttctccc 432  Q
    ||||||||||||||||||||||||||||||||    
T  19647334 ctcttctcttctctgacttctcactttctccc 19647365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 459
Target Start/End: Complemental strand, 20005922 - 20005866
Alignment:
Q  401 ctcttctcttctctgacttctcactttctccccttttctcccaaaaacagtttctacgt 459  Q
    |||||||||||||||||||||||||||||  | |||||||||| |||| |||| |||||    
T  20005922 ctcttctcttctctgacttctcactttct--ctttttctcccagaaactgtttttacgt 20005866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 149452 - 149399
Alignment:
Q  401 ctcttctcttctct-gacttctcactttctccccttttctcccaaaaacagtttc 454  Q
    ||||||| |||||| |||||||||||||||||| ||||||||||||| |||||||    
T  149452 ctcttcttttctctcgacttctcactttctccc-ttttctcccaaaagcagtttc 149399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 126 - 192
Target Start/End: Original strand, 31345932 - 31345998
Alignment:
Q  126 ccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattcta 192  Q
    |||||| ||| | ||||| | |||||||| |||||||  | ||||||||||||||||||||||||||    
T  31345932 ccaaaagccccaatttcatcaacccaaataccaaatttgataggaaactcaacctatgtttattcta 31345998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 398 - 453
Target Start/End: Original strand, 6576689 - 6576745
Alignment:
Q  398 ctcctctt-ctcttctctgacttctcactttctccccttttctcccaaaaacagttt 453  Q
    |||||||| ||||||||||||||||||||||||||  || |||| ||||| ||||||    
T  6576689 ctcctcttgctcttctctgacttctcactttctccatttatctctcaaaagcagttt 6576745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 481 - 517
Target Start/End: Complemental strand, 15266839 - 15266803
Alignment:
Q  481 gtaaccctaattctctaatggtctcatctatttataa 517  Q
    |||||||||||||||||||| |||| |||||||||||    
T  15266839 gtaaccctaattctctaatgctctcctctatttataa 15266803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 481 - 517
Target Start/End: Complemental strand, 17811311 - 17811275
Alignment:
Q  481 gtaaccctaattctctaatggtctcatctatttataa 517  Q
    |||||||||||||||||||| |||| |||||||||||    
T  17811311 gtaaccctaattctctaatgctctcgtctatttataa 17811275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 143; Significance: 8e-75; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 126 - 462
Target Start/End: Complemental strand, 44028 - 43692
Alignment:
Q  126 ccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaat 225  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| || ||| ||| |   |||  ||||| | |    
T  44028 ccaaaaacccaattttcaaccacccaaatcccaaattcaataggaaactcaacctatgtttattctacaacctaaacatcaatttgtacactaattaatt 43929  T
Q  226 gaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataa-catcaaaa-ctattaacaactacaagcttaaaccctttttcagaa 323  Q
    |||||| ||||| |||||||||||||||    |||  || |||||||||| ||| |||||||| ||| ||||||| || |  ||||||||| ||||||||    
T  43928 gaattatctactttttcaacaatcaattcca-aatcaaaacctaatttctctaatcatcaaaatctaataacaacaaccatgttaaaccctatttcagaa 43830  T
Q  324 ctatatactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctcttctctgacttctca 423  Q
     |||| || ||| |||| ||||| | |||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  43829 ttataaacccattattagagaagct-agtcccacccttaccttagattggttgaattccgactctacaagcttgctcctcttctcttctctgacttctca 43731  T
Q  424 ctttctccccttttctcccaaaaacagtttctacgtatt 462  Q
    ||||||||| || | |||||||| |||||||||||||||    
T  43730 ctttctccctttgtatcccaaaagcagtttctacgtatt 43692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 126 - 462
Target Start/End: Complemental strand, 39336 - 39000
Alignment:
Q  126 ccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaat 225  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||| ||||||| |||||| | ||    |||  ||||||| |    
T  39336 ccaaaaacccaattttcaaccacccaaatcccaaattcaataggaaattcaacctatgtttaatctacaacctgaacattatcttgtacactaattcatt 39237  T
Q  226 gaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataac-atcaaaa-ctattaacaactacaagcttaaaccctttttcagaa 323  Q
    |||||| ||||| |||||||||||||||    |||  || |||||||||| |||  ||||||| | |  |||||| || |  ||| ||| | ||||| ||    
T  39236 gaattatctactttttcaacaatcaattcca-aatcaaaacctaatttctctaaagatcaaaatcaaacaacaacaaccatgttacaccgtatttcataa 39138  T
Q  324 ctatatactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctcttctctgacttctca 423  Q
     |||| || ||| |||| ||||| | |||| ||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||| |||||||||    
T  39137 ttataaacccattattagagaagct-agtcccacccttaccttagattggttgaattcggactcaacaagcttgctcctcttctcttctcggacttctca 39039  T
Q  424 ctttctccccttttctcccaaaaacagtttctacgtatt 462  Q
    ||||||||| ||||||||||||| |||||||||||||||    
T  39038 ctttctccctttttctcccaaaagcagtttctacgtatt 39000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 123; Significance: 7e-63; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 75 - 427
Target Start/End: Complemental strand, 38734 - 38381
Alignment:
Q  75 cgccgtggtgagcgatgacaaacagttctacgggaagaaatctattttttcccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaact 174  Q
    |||||||| |||||||||||  ||| | |||||| ||||| |  ||||  ||||||||||| | ||||||| ||||||||  ||||||  | | |||||     
T  38734 cgccgtggcgagcgatgacaggcagctatacgggcagaaaccagttttcacccaaaaaccccaatttcaactacccaaatctcaaatttgacaagaaaca 38635  T
Q  175 caacctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaac-cctaattt 273  Q
      ||||||  |||||| |||| |||||| ||| |  | | ||||||||| || ||||||||| |||||||||||||| || | |||||||  ||||| ||    
T  38634 ttacctattgttattccacaacctgaacatcaattttcatgttaattcattggattacctacactttcaacaatcaaatt-gtaatttaaaacctaactt 38536  T
Q  274 ctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagattgg 373  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  38535 ctataacatcaaaactattaacaactacaaaattaaaccctttttcagaattatatactcatgattaaagaaggttagtcacacccttaccttagattgg 38436  T
Q  374 ttgaattc-agactctataagcttgctcctcttctcttctctgacttctcacttt 427  Q
    || |||||  || |||| |||||| |   ||||||||||||||||||||||||||    
T  38435 ttaaattctggattctacaagctttccattcttctcttctctgacttctcacttt 38381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 120; Significance: 4e-61; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 217 - 427
Target Start/End: Original strand, 3107 - 3317
Alignment:
Q  217 taattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactattaacaactacaagcttaaacccttt 316  Q
    ||||||| |||||||||||| ||||||||||| || || ||||||||| ||||| |||||||||||||||||||| |||||||||||  |||||||||||    
T  3107 taattcattgaattacctacactttcaacaattaaatt-gcaatttaaacctaacttctataacatcaaaactatcaacaactacaaaattaaacccttt 3205  T
Q  317 ttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcag-actctataagcttgctcctcttctcttctctg 415  Q
    |||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| | | |||| |||||| | | ||||||||||||||    
T  3206 ttcataattatatactcatgattaaagaaggttagtcccacccttaccttagattggttaaattctgaattctacaagctttcccttcttctcttctctg 3305  T
Q  416 acttctcacttt 427  Q
    ||||||||||||    
T  3306 acttctcacttt 3317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 111; Significance: 1e-55; HSPs: 2)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 101 - 375
Target Start/End: Original strand, 28500 - 28773
Alignment:
Q  101 tctacgggaagaaatctattttttcccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctga 200  Q
    |||||||||||||| |  ||||  | ||||||||| | ||||||| |||||||| |||||||  | |||||||   || |||  ||||||||||| ||||    
T  28500 tctacgggaagaaaccagttttcacacaaaaaccccaatttcaactacccaaatcccaaatttgacaggaaacattacgtattattattctacaacctga 28599  T
Q  201 acctcattccttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactattaacaacta 300  Q
    || ||| |  ||| ||||||||| |  ||||||||| |||||||||||||| ||| |||||||||||||||| ||||||||  |||||||||||||||||    
T  28600 acatcaatttttatgttaattcattagattacctacactttcaacaatcaaattt-caatttaaccctaattcctataacaataaaactattaacaacta 28698  T
Q  301 caagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagattggtt 375  Q
    |||| |||||| ||||||||||| |||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  28699 caagattaaacgctttttcagaattatatacttatgattaaagaaggttagtcccactcttaccttagattggtt 28773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 558 - 606
Target Start/End: Original strand, 28895 - 28943
Alignment:
Q  558 taaacctacataatcttccttattccaattctacccttatgcctaatta 606  Q
    ||||||||||||||||||||||||| | || | ||||||||||| ||||    
T  28895 taaacctacataatcttccttattctagttatgcccttatgcctcatta 28943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 111; Significance: 1e-55; HSPs: 2)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 355 - 548
Target Start/End: Complemental strand, 35198 - 34998
Alignment:
Q  355 cacccttaccttagattggttgaattcagactctataagcttgctcctcttctcttctctgacttctcactttctccccttttctcccaaaaacagtttc 454  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||| |||||||| ||||||||||||| | ||| |    
T  35198 cacccttaccttagattggttgaattcggactctacaagcttgctcctcttctcttctctaacttctcattttctccctttttctcccaaaagcggttac 35099  T
Q  455 tacgtattc-------tgactttctaatttgttgtaaccctaattctctaatggtctcatctatttataatcactatctgagtttgtttttcacttaatc 547  Q
    |||||||||       ||||  |||| | |||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||| ||||||||||    
T  35098 tacgtattctgtatcatgacactctattctgttgtaaccctaattctctaatggtctcatctatttatagtcactaaccgagtttgtttctcacttaatc 34999  T
Q  548 t 548  Q
    |    
T  34998 t 34998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 147 - 201
Target Start/End: Complemental strand, 35706 - 35652
Alignment:
Q  147 acccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaa 201  Q
    ||||||||||||||||  | |||||||| |||||||| ||||||||||| |||||    
T  35706 acccaaattccaaatttgataggaaactaaacctatgattattctacaacctgaa 35652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 111; Significance: 1e-55; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 16 - 432
Target Start/End: Complemental strand, 60006 - 59590
Alignment:
Q  16 agaacactcaccngttgcgagttgatatcgaagtcactcgcaaggcgaacaagat-cacccgccgtggtgagcgatgacaaacagttctacgggaagaaa 114  Q
    ||||||||| || |||||||||||| ||| ||| ||||||| ||||| ||| ||| ||| || ||||| ||||||||||| | || | |||||| |||||    
T  60006 agaacactcgcc-gttgcgagttgacatcaaagccactcgcgaggcggacaggattcactcgtcgtggcgagcgatgacagatagctgtacgggtagaaa 59908  T
Q  115 tctattttttcccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttac 214  Q
     | |||||  || ||||| || | ||| |||  ||||||| |||||||    |||||||     ||||  ||||||||||| || ||| ||| |  |||     
T  59907 ccaattttcaccaaaaaatcctaattttaacttcccaaatcccaaatttggtaggaaacattgtctattgttattctacaacctaaacatcaatttttat 59808  T
Q  215 gttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactattaacaactacaagcttaaaccct 314  Q
     |||||||| || |||||||||| ||||||||||||| || ||||| ||| |||||||||||||| ||||||||||| |||||||||||  |||||||||    
T  59807 attaattcattggattacctactatttcaacaatcaaatt-gcaatataaacctaatttctataatatcaaaactatcaacaactacaaagttaaaccct 59709  T
Q  315 ttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagattggttgaattc-agactctataagcttgctcctcttctcttctc 413  Q
    ||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||| | ||| | | | || |||||| | | ||||||||||||    
T  59708 ttttcagaattatatactcatgattaaagaaggttagacccacccttaccttagattggttaagttctaaattatacaagctttcccttcttctcttctc 59609  T
Q  414 tgacttctcactttctccc 432  Q
    |||||| ||||||||||||    
T  59608 tgacttatcactttctccc 59590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 40050 - 39976
Alignment:
Q  128 aaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 202  Q
    |||||||||| ||||| | |||||||| |||| ||  | |||||||| |||||||| ||||||||||| ||||||    
T  40050 aaaaacccaaatttcatctacccaaatcccaattttgataggaaacttaacctatgattattctacaacctgaac 39976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 109; Significance: 2e-54; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 185 - 432
Target Start/End: Original strand, 16977 - 17223
Alignment:
Q  185 ttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatca 284  Q
    ||||||||||| |||||| ||| |  |||  |||||||| || |||||||||||||||||||||||| || |||| |||| |||||||||||||| ||||    
T  16977 ttattctacaacctgaacatcaatttttatattaattcattggattacctactctttcaacaatcaaatt-gcaaattaaacctaatttctataatatca 17075  T
Q  285 aaactattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcag- 383  Q
    || |||| |||||||||||  ||||||||||||| |||| |||||||||||||||||||||| || ||| ||||||||||||||||| ||| ||||| |     
T  17076 aa-ctatcaacaactacaaagttaaaccctttttaagaattatatactcatgattaaagaagattcgtcccacccttaccttagattagttaaattctga 17174  T
Q  384 actctataagcttgctcctcttctcttctctgacttctcactttctccc 432  Q
    | |||| |||||| | | |||||||||||||||||||||||||||||||    
T  17175 attctacaagctttcccttcttctcttctctgacttctcactttctccc 17223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 185 - 432
Target Start/End: Original strand, 26508 - 26754
Alignment:
Q  185 ttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatca 284  Q
    ||||||||||| |||||| ||| |  |||  |||||||| || |||||||||||||||||||||||| || |||| |||| |||||||||||||| ||||    
T  26508 ttattctacaacctgaacatcaatttttatattaattcattggattacctactctttcaacaatcaaatt-gcaaattaaacctaatttctataatatca 26606  T
Q  285 aaactattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcag- 383  Q
    || |||| |||||||||||  ||||||||||||| |||| |||||||||||||||||||||| || ||| ||||||||||||||||| ||| ||||| |     
T  26607 aa-ctatcaacaactacaaagttaaaccctttttaagaattatatactcatgattaaagaagattcgtcccacccttaccttagattagttaaattctga 26705  T
Q  384 actctataagcttgctcctcttctcttctctgacttctcactttctccc 432  Q
    | |||| |||||| | | |||||||||||||||||||||||||||||||    
T  26706 attctacaagctttcccttcttctcttctctgacttctcactttctccc 26754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 104; Significance: 2e-51; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 38 - 465
Target Start/End: Complemental strand, 5945 - 5517
Alignment:
Q  38 tgatatcgaagtcactcgcaaggcgaacaagat-cacccgccgtggtgagcgatgacaaacagttctacgggaagaaatctattttttcccaaaaaccca 136  Q
    ||||||| ||| ||||||| |||||  |||||| ||| |||||||| |||||||||   |||| |||||||||||||| |  ||||   ||||||||| |    
T  5945 tgatatctaagccactcgccaggcgg-caagattcactcgccgtggcgagcgatgagtgacagctctacgggaagaaaccagttttcagccaaaaaccta 5847  T
Q  137 attttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctac 236  Q
    |||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||| |||||| ||| |   |||  ||||||| ||||||| |||     
T  5846 attttcaaccacccaaatcccaaattcaatgggaaactcaacctatgtttattctacaacctgaacatcaatttgtacactaattcattgaattatctag 5747  T
Q  237 tctttcaacaatcaattttgcaatttaaccctaatttctataa-catcaaaa-ctattaacaactacaagcttaaaccctttttcagaactatatactca 334  Q
    | ||||||||||||||| || | |  || |||||||||| ||| |||||||| | |  |||||| || |  ||||| ||| |||||||| |||| || ||    
T  5746 tttttcaacaatcaattctg-attcaaaacctaatttctctaatcatcaaaatcaaacaacaacaaccatgttaaatcctatttcagaattataaaccca 5648  T
Q  335 tgattaaagaaggttagtctcacccttaccttagattggttgaattc-agactctataagcttgctcctcttctcttctctgacttctcactttctcccc 433  Q
    | |||| |||| | ||||| |||||||||||||||||| |||||| | | | |||| |||||| | | ||||||||||| ||||||||||||||||||      
T  5647 ttattagagaa-gctagtcccacccttaccttagattgattgaatcctaaattctacaagctttcccttcttctcttctgtgacttctcactttctccat 5549  T
Q  434 ttttctcccaaaaacagtttctacgtattctg 465  Q
    |||||||||||||   ||||||||||||||||    
T  5548 ttttctcccaaaagtcgtttctacgtattctg 5517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 548 - 601
Target Start/End: Complemental strand, 5492 - 5439
Alignment:
Q  548 tctttgattataaacctacataatcttccttattccaattctacccttatgcct 601  Q
    ||||| |||||||||||||||| | ||||||||||||||||| |||||||||||    
T  5492 tcttttattataaacctacatagttttccttattccaattctgcccttatgcct 5439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 100; Significance: 4e-49; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 185 - 550
Target Start/End: Complemental strand, 7695 - 7327
Alignment:
Q  185 ttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatca 284  Q
    ||||||||||| |||||| ||| |  | ||||||||||| || ||| |||||  || |||||||||| ||| ||||| || ||||| |||||||||||||    
T  7695 ttattctacaacctgaacatcaattttcacgttaattcattggatttcctacatttccaacaatcaaattt-caattaaaacctaacttctataacatca 7597  T
Q  285 aaactattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcag- 383  Q
    ||||||| |||||||| ||  ||||||||||||||||||  |||||||||| ||||||||||||||||| ||||||||||||||||||||| || || |     
T  7596 aaactatcaacaactataaaattaaaccctttttcagaatcatatactcataattaaagaaggttagtcccacccttaccttagattggttaaactctga 7497  T
Q  384 actctataagcttgctc--------------ctcttctcttctctgacttctcactttctccccttttctcccaaaaacagtttctacgtattctgactt 469  Q
    | |||| |||||| | |              ||||||| ||||||||||||||||||||||||           ||||  ||||  |||| ||||||||     
T  7496 attctacaagctttcccttcttttcacaaagctcttctgttctctgacttctcactttctccc-----------aaaattgttttcacgtgttctgactc 7408  T
Q  470 tctaatttgttgtaaccctaattctctaatggtctcatctatttataatcactatctgagtttgtttttcacttaatctct 550  Q
    |||| ||  |||||||||||||||| |||||||||||||||||||||||||| | |||||||||||| |||||||||||||    
T  7407 tctatttgtttgtaaccctaattctttaatggtctcatctatttataatcaccaactgagtttgtttctcacttaatctct 7327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 95; Significance: 4e-46; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 212 - 449
Target Start/End: Original strand, 72982 - 73221
Alignment:
Q  212 tacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactattaa--caactacaagcttaa 309  Q
    |||||||||||||||  ||||||||||||||||||||||| ||||||| ||||||||||||  |||||||| ||||||| |||  |||| ||| | ||||    
T  72982 tacgttaattcaatggcttacctactctttcaacaatcaactttgcaaattaaccctaattcttataacataaaaactaataaaacaacaacatg-ttaa 73080  T
Q  310 accctttttcagaactatata-ctcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctc 408  Q
    |||| |||| ||||  ||| | ||||| |||| |||| ||||||| ||||||||||||| ||| | ||  ||||||||||| ||||||||||||||||||    
T  73081 acccctttttagaatcatacaactcattattagagaaagttagtcccacccttaccttacattagatggtttcagactctacaagcttgctcctcttctc 73180  T
Q  409 -ttctctgacttctcactttctccccttttctcccaaaaaca 449  Q
     |||| |||||||||||||||| |||||||||||||||||||    
T  73181 tttctttgacttctcactttct-cccttttctcccaaaaaca 73221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 209 - 431
Target Start/End: Original strand, 75829 - 76054
Alignment:
Q  209 ccttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactatt--aacaactacaagct 306  Q
    ||||||||||| |||||   ||||||||||||||||||||||| ||||||| ||| ||||||||  |||||||||||||||| |  |||||| ||| | |    
T  75829 ccttacgttaactcaatagtttacctactctttcaacaatcaactttgcaaattatccctaattcttataacatcaaaactaataaaacaacaacatg-t 75927  T
Q  307 taaaccctttttcagaactata-tactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctctt 405  Q
    ||||||| |||| ||||  |||  || ||| |||  |||| | ||||| ||||||||||||||||| | ||  ||||||||||| |||||| || |||||    
T  75928 taaacccctttttagaatcatacaacccattattggagaaagctagtcccacccttaccttagattagatggtttcagactctacaagcttacttctctt 76027  T
Q  406 ctc-ttctctgacttctcactttctcc 431  Q
    ||| |||||||||||||||||||||||    
T  76028 ctctttctctgacttctcactttctcc 76054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 209 - 280
Target Start/End: Original strand, 110217 - 110288
Alignment:
Q  209 ccttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataac 280  Q
    ||||||||||||||||||  |||||||||||||||| |||||||||||||| | ||||||||||||||||||    
T  110217 ccttacgttaattcaatggtttacctactctttcaataatcaattttgcaaataaaccctaatttctataac 110288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 306 - 439
Target Start/End: Complemental strand, 66134 - 66000
Alignment:
Q  306 ttaaaccctttttcagaactatata-ctcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctct 404  Q
    |||||||||||||||||| |||| | | ||| |||||||||   ||||| ||||||||||||||| | | ||| | | ||||||| ||||||||| ||||    
T  66134 ttaaaccctttttcagaattatacaacccattattaaagaaatctagtcccacccttaccttagaatagatgattccggactcta-aagcttgctgctct 66036  T
Q  405 tctctt-ctctgacttctcactttctccccttttct 439  Q
    |||||| || ||||||||||||||||||| ||||||    
T  66035 tctctttctatgacttctcactttctccctttttct 66000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 91; Significance: 9e-44; HSPs: 4)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 266 - 431
Target Start/End: Original strand, 23564 - 23730
Alignment:
Q  266 cctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttacct 365  Q
    ||||| ||||||||||||||||||||||||||||||||  ||||||||||||| |||| |||||||||||||||||||||||| |||| |||||||||||    
T  23564 cctaacttctataacatcaaaactattaacaactacaaaattaaacccttttttagaattatatactcatgattaaagaaggtcagtcccacccttacct 23663  T
Q  366 tagattggttgaa-ttcagactctataagcttgctcctcttctcttctctgacttctcactttctcc 431  Q
    |||||||||  || ||  || |||| |||||| | | ||||||| ||||||||||||||||||||||    
T  23664 tagattggtcaaattttggattctacaagctttcccttcttctcatctctgacttctcactttctcc 23730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 257 - 328
Target Start/End: Original strand, 26668 - 26739
Alignment:
Q  257 caatttaaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata 328  Q
    |||| |||||||||| |||||||||||||| |||  |||||||||||  |||||||||||||||||| ||||    
T  26668 caatctaaccctaatctctataacatcaaagctaacaacaactacaaagttaaaccctttttcagaattata 26739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 431 - 462
Target Start/End: Original strand, 26843 - 26874
Alignment:
Q  431 cccttttctcccaaaaacagtttctacgtatt 462  Q
    ||||||||||||||||||||||||||||||||    
T  26843 cccttttctcccaaaaacagtttctacgtatt 26874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 23380 - 23459
Alignment:
Q  10 gcgagtagaacactcaccngttgcgagttgatatcgaagtcactcgcaaggcgaacaagatcacccgccgtggtgagcgat 90  Q
    ||||||||||||||| || |||||||||||| ||| ||| || || | |||||||||||  ||| |||||||| |||||||    
T  23380 gcgagtagaacactcgcc-gttgcgagttgacatctaagccattcacgaggcgaacaaggacactcgccgtggcgagcgat 23459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 89; Significance: 1e-42; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 216 - 423
Target Start/End: Original strand, 31831 - 32038
Alignment:
Q  216 ttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctt 315  Q
    |||||||| || |||  |||| ||||||| |||||| ||| ||||| || ||||| ||||| ||||||||||||||||||||||| ||  ||||||||||    
T  31831 ttaattcattggattttctacactttcaaaaatcaaattt-caattaaaacctaacttctacaacatcaaaactattaacaactataaaattaaaccctt 31929  T
Q  316 tttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcag-actctataagcttgctcctcttctcttctct 414  Q
    ||||||||  ||||||||||||||||||| |||||||||||||||||||||||||| ||| || || | | |||| |||||| | | |||||||||||||    
T  31930 tttcagaatcatatactcatgattaaagatggttagtctcacccttaccttagattagttaaactctgaattctacaagctttcccttcttctcttctct 32029  T
Q  415 gacttctca 423  Q
    |||||||||    
T  32030 gacttctca 32038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 306 - 367
Target Start/End: Original strand, 32039 - 32100
Alignment:
Q  306 ttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttacctta 367  Q
    ||||||||||||||||||  |||||||||||||||||||||||||| | |||||||||||||    
T  32039 ttaaaccctttttcagaatcatatactcatgattaaagaaggttagccccacccttacctta 32100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 86; Significance: 8e-41; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 126 - 427
Target Start/End: Complemental strand, 14828 - 14526
Alignment:
Q  126 ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaa 224  Q
    |||||||||||||||| || |||||||||  |||||||  | ||||||||||||||||||||||||||||| |||||| ||| | |||| ||||||| |     
T  14828 ccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaacctgaacttcaattcttatgttaatttat 14729  T
Q  225 tgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataa-catcaaaactattaacaactacaagcttaaaccctttttcagaa 323  Q
    |  |||||||||||||| |||||||||||    ||   || |||||||||| ||| |||||||||||  |||||||||||  ||||||||||||||||||    
T  14728 tagattacctactcttt-aacaatcaattcca-aaccaaaacctaatttctctaatcatcaaaactaacaacaactacaaatttaaaccctttttcagaa 14631  T
Q  324 ctata-tactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctc-ttctctgacttct 421  Q
     ||||  || ||| |||| |||| | ||||||||||||||||||||||| | ||| | | ||||||| |||||||||| ||||||| |||| ||||||||    
T  14630 ttatacaacccattattagagaaagctagtctcacccttaccttagattagatgattccggactcta-aagcttgctcttcttctctttctttgacttct 14532  T
Q  422 cacttt 427  Q
    ||||||    
T  14531 cacttt 14526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 126 - 427
Target Start/End: Complemental strand, 23886 - 23584
Alignment:
Q  126 ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaa 224  Q
    |||||||||||||||| || |||||||||  |||||||  | ||||||||||||||||||||||||||||| |||||| ||| | |||| ||||||| |     
T  23886 ccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaacctgaacttcaattcttatgttaatttat 23787  T
Q  225 tgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataa-catcaaaactattaacaactacaagcttaaaccctttttcagaa 323  Q
    |  |||||||||||||| |||||||||||    ||   || |||||||||| ||| |||||||||||  |||||||||||  ||||||||||||||||||    
T  23786 tagattacctactcttt-aacaatcaattcca-aaccaaaacctaatttctctaatcatcaaaactaacaacaactacaaatttaaaccctttttcagaa 23689  T
Q  324 ctata-tactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctc-ttctctgacttct 421  Q
     ||||  || ||| |||| |||| | ||||||||||||||||||||||| | ||| | | ||||||| |||||||||| ||||||| |||| ||||||||    
T  23688 ttatacaacccattattagagaaagctagtctcacccttaccttagattagatgattccggactcta-aagcttgctcttcttctctttctttgacttct 23590  T
Q  422 cacttt 427  Q
    ||||||    
T  23589 cacttt 23584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 86; Significance: 8e-41; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 349 - 550
Target Start/End: Complemental strand, 68744 - 68560
Alignment:
Q  349 tagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctcttctctgacttctcactttctccccttttctcccaaaaac 448  Q
    ||||| |||||||||||||||||| ||||||||  |||||| ||  ||| ||| ||||| |||||||||||||||||||||||| ||||||||||||| |    
T  68744 tagtcccacccttaccttagattgattgaattcgaactctacaaatttgttccacttcttttctctgacttctcactttctccctttttctcccaaaagc 68645  T
Q  449 agtttctacgtattctgactttctaatttgttgtaaccctaattctctaatggtctcatctatttataatcactatctgagtttgtttttcacttaatct 548  Q
    ||||||||                 ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  68644 agtttcta-----------------atttgttgtaaccttaattctctaatggtctcatctatttataatcactaactgagtttgtttctcacttaatct 68562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 217 - 368
Target Start/End: Original strand, 56878 - 57026
Alignment:
Q  217 taattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctt 315  Q
    |||||||  |||||| |||||||||| ||||||||||||    |  |||||||||| ||| ||||||||||| |||||||| ||||||| |||   ||||    
T  56878 taattcatcgaattatctactctttctacaatcaattttagtttcaaaccctaatt-ctacaacatcaaaacctattaacatctacaaggtta---cctt 56973  T
Q  316 tttcagaactatatactcatgattaaagaaggttagtctcacccttaccttag 368  Q
    |||||| | || ||||| |||||||||||||||||||| ||||||||||||||    
T  56974 tttcaggattacatacttatgattaaagaaggttagtcccacccttaccttag 57026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1800 (Bit Score: 85; Significance: 3e-40; HSPs: 2)
Name: scaffold1800
Description:

Target: scaffold1800; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 216 - 372
Target Start/End: Original strand, 509 - 664
Alignment:
Q  216 ttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctt 315  Q
    |||||||| |||||||||||| |||||||||||||| || |||||| || ||||| |||||||||||||||| ||| |||||| ||||  ||||||| ||    
T  509 ttaattcattgaattacctacactttcaacaatcaaatt-gcaattcaaacctaacttctataacatcaaaattatcaacaacaacaaaattaaaccatt 607  T
Q  316 tttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagattg 372  Q
    ||| |||| |||| |||||||||||||||||||||||| ||||||||||||||||||    
T  608 tttaagaattatagactcatgattaaagaaggttagtcccacccttaccttagattg 664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1800; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 453
Target Start/End: Original strand, 708 - 757
Alignment:
Q  401 ctcttctcttctctgacttctcactttctccccttttctcccaaaaacagttt 453  Q
    |||||||||||||||||||||||||||||   |||||||||||||||| ||||    
T  708 ctcttctcttctctgacttctcactttct---cttttctcccaaaaactgttt 757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 262 - 447
Target Start/End: Complemental strand, 15721 - 15537
Alignment:
Q  262 taaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactatatactc-atgattaaagaaggttagtctcaccct 360  Q
    |||||||||||||||||||||||||||||  |||||||||||| ||||||||||||| ||||  ||| |  | || |||| ||||| |||||| ||||||    
T  15721 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaacccttttttagaatcatacaaaccattattagagaag-ttagtcccaccct 15623  T
Q  361 taccttagattggttgaattcagactctataagcttgctcctcttctctt-ctctgacttctcactttctccccttttctcccaaaaa 447  Q
    ||||||||||| | ||| ||| ||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  15622 taccttagattagatgatttcggactcta-aagcttgctcctcttctctttctctgacttctcactttct-cccttttctcccaaaaa 15537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 78; Significance: 5e-36; HSPs: 3)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 178 - 408
Target Start/End: Original strand, 28415 - 28642
Alignment:
Q  178 cctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctat 277  Q
    |||||||||||||||||| |||| | ||| |   |||  ||||| | || |||||||||||||| |||||| || ||  |||| |||||||||| |||||    
T  28415 cctatgtttattctacaacctgaccatcaatttgtacactaattaattggattacctactcttttaacaattaaatt--caatctaaccctaatctctat 28512  T
Q  278 aacatcaaaactattaacaactacaa-gcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagattggttg 376  Q
    ||||| |||||||  ||||||||||| | |||||||||||||||||| ||||||||||||||||| ||||||||||| ||| ||||||||||||| | ||    
T  28513 aacataaaaactaacaacaactacaaaggttaaaccctttttcagaattatatactcatgattaaggaaggttagtcccactcttaccttagattagatg 28612  T
Q  377 aattcagactctataagcttgctcctcttctc 408  Q
    |  |  ||||||| ||| ||||||||||||||    
T  28613 a--taggactctacaagattgctcctcttctc 28642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 373
Target Start/End: Complemental strand, 7256 - 7220
Alignment:
Q  337 attaaagaaggttagtctcacccttaccttagattgg 373  Q
    |||||||||||||||||||||||||||||||||||||    
T  7256 attaaagaaggttagtctcacccttaccttagattgg 7220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 398 - 453
Target Start/End: Complemental strand, 33668 - 33612
Alignment:
Q  398 ctcctctt-ctcttctctgacttctcactttctccccttttctcccaaaaacagttt 453  Q
    |||||||| ||||||||||||||||||||||||||| || ||||| |||| ||||||    
T  33668 ctcctcttgctcttctctgacttctcactttctccctttatctcctaaaagcagttt 33612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 76; Significance: 8e-35; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 262 - 447
Target Start/End: Complemental strand, 3528 - 3343
Alignment:
Q  262 taaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcaccct 360  Q
    |||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||  |||  || ||| |||| |||| | ||||| ||||||    
T  3528 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaatcatacaacgcattattagagaaagctagtcccaccct 3429  T
Q  361 taccttagattggttgaattcagactctataagcttgctcctcttctct-tctctgacttctcactttctccccttttctcccaaaaa 447  Q
    ||||||||||| | ||| ||| ||||||| ||||||||||||||||| | ||||| |||| ||||||||| ||||||||||| |||||    
T  3428 taccttagattagatgatttcggactcta-aagcttgctcctcttctttgtctctaacttttcactttct-cccttttctccaaaaaa 3343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 79 - 464
Target Start/End: Original strand, 8604 - 8994
Alignment:
Q  79 gtggtgagcgatgacaaacagttctacgggaagaaatctattttttc-ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactca 176  Q
    |||| |||||||||| ||||| |||||||||||||| ||| ||||   |||||||||||||||| ||||||||||||| |||||||  | || ||||||     
T  8604 gtggcgagcgatgacgaacagctctacgggaagaaa-ctagttttcagccaaaaacccaatttttcaaccacccaaatcccaaatttgatagaaaactct 8702  T
Q  177 acctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaattttgcaattt--aaccctaatttc 274  Q
    ||||||| ||| ||| ||| ||||||  || |  |||| ||||||||    ||||||||||||||||||||||||||||  |||||  || |||||||||    
T  8703 acctatgattactctgcaacctgaacaccaattattaccttaattcatctgattacctactctttcaacaatcaatttt--aatttcaaaacctaatttc 8800  T
Q  275 tataacatcaaaactattaa--caactacaagcttaaaccctttttcagaactatatactc-atgattaaagaaggttagtctcacccttaccttagatt 371  Q
    |  || ||||||| ||  ||  |||| ||| | | || ||| |||||||||  ||| | || || |||| | || | ||||| |||||||| ||||||||    
T  8801 tcaaaaatcaaaattaacaaaacaacaacatgttaaacccccttttcagaatcatacaatccattattagataaagctagtcccacccttaacttagatt 8900  T
Q  372 ggttgaattcagactctataagcttgctcctcttctc-ttctctgacttctcactttctccccttttctcccaaaaa-cagtttctacgtattct 464  Q
     | ||| ||||||||||| |||||||||||| | ||| ||||||||||||||||||||| ||||||||||||||||| ||||||  |||||||||    
T  8901 agatgatttcagactctacaagcttgctcctttcctctttctctgacttctcactttct-cccttttctcccaaaaagcagttttcacgtattct 8994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 209 - 367
Target Start/End: Original strand, 970 - 1128
Alignment:
Q  209 ccttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactattaacaactacaagctta 308  Q
    |||||||||||||| || | ||||||||| ||| ||||||||||||||||||| |||| ||||||||| |||||||||||||  |||| ||||||| |||    
T  970 ccttacgttaattcgataatttacctactattttaacaatcaattttgcaatt-aaccataatttctaaaacatcaaaactaacaacatctacaaggtta 1068  T
Q  309 aaccctttttcagaactatatact-catgattaaagaaggttagtctcacccttacctta 367  Q
    ||||||||||||||| |||| | | ||| |||| |||| | |||||||||||||||||||    
T  1069 aaccctttttcagaattatacaatccattattagagaaagctagtctcacccttacctta 1128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 71; Significance: 7e-32; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 208 - 290
Target Start/End: Original strand, 12378 - 12460
Alignment:
Q  208 tccttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaacta 290  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  12378 tccttacgttaattcaatgatttacctactctttcaacaatcaattttgcaaataaaccctaatttctataacatcaaaacta 12460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 241 - 377
Target Start/End: Original strand, 49656 - 49791
Alignment:
Q  241 tcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactatatactcatgatta 340  Q
    ||||||||||| || ||||||  | ||||| |||||||||||||||||||| |||||  | ||  |||||||||||||||||| |||  |||||||||||    
T  49656 tcaacaatcaaatt-gcaattcgaacctaacttctataacatcaaaactatcaacaaaaataaaattaaaccctttttcagaattatggactcatgatta 49754  T
Q  341 aagaaggttagtctcacccttaccttagattggttga 377  Q
    ||||||||||||| |||||||||||||||||||||||    
T  49755 aagaaggttagtcccacccttaccttagattggttga 49791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1102 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold1102
Description:

Target: scaffold1102; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 267 - 381
Target Start/End: Complemental strand, 2051 - 1937
Alignment:
Q  267 ctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttacctt 366  Q
    |||| |||| |||||||| || |||||||||| ||||  |||||||||||||||||| |||| |||||||||||||||||||||||| |||| |||||||    
T  2051 ctaacttctttaacatcacaattattaacaacaacaaaattaaaccctttttcagaattatagactcatgattaaagaaggttagtcccaccgttacctt 1952  T
Q  367 agattggttgaattc 381  Q
    ||||||||| |||||    
T  1951 agattggttaaattc 1937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1102; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 401 - 473
Target Start/End: Complemental strand, 1902 - 1832
Alignment:
Q  401 ctcttctcttctctgacttctcactttctccccttttctcccaaaaacagtttctacgtattctgactttcta 473  Q
    |||||||||||||||||||||||||||||    ||||||||||||||| |||| ||||| |||||||| ||||    
T  1902 ctcttctcttctctgacttctcactttct--ttttttctcccaaaaactgtttttacgtgttctgactctcta 1832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 263 - 372
Target Start/End: Original strand, 9011 - 9120
Alignment:
Q  263 aaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcaccctt 361  Q
    |||||||||| ||| ||||||||||| |||||||||||||||| |||||||||||||||| | || ||||| |||||||||||||||||||| |||||||    
T  9011 aaccctaatt-ctacaacatcaaaacctattaacaactacaagattaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaccctt 9109  T
Q  362 accttagattg 372  Q
    |||||||||||    
T  9110 accttagattg 9120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 208 - 454
Target Start/End: Original strand, 4829 - 5075
Alignment:
Q  208 tccttacgttaattcaatgaattacc-tactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactattaacaactac-aagc 305  Q
    |||||||||||||||||||  ||||| |||||||||||| || || ||  |||| ||||||||||  |||||||||||||||||  ||||||||| |||     
T  4829 tccttacgttaattcaatggtttaccctactctttcaacgattaaatt--caatctaaccctaatcactataacatcaaaactaacaacaactacaaagg 4926  T
Q  306 ttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctctt 405  Q
    |||||||||||| ||||| |||| |  ||| |||| |||| | ||||| ||||||||||||| ||| | ||| |   ||||||| ||| ||| || | ||    
T  4927 ttaaacccttttacagaattatacaaccattattagagaaagctagtcccacccttaccttatattagatgattctggactcta-aagtttgttcttgtt 5025  T
Q  406 ctc-ttctctgacttctcactttctccccttttctcccaaaaacagtttc 454  Q
    ||| |||||||||||||||||||   ||||||||||||||||||||||||    
T  5026 ctctttctctgacttctcacttttctcccttttctcccaaaaacagtttc 5075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 228 - 377
Target Start/End: Original strand, 33367 - 33516
Alignment:
Q  228 attacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaacta 326  Q
    |||| ||||| |||||||||||||||||    |  |||||||||| ||| ||||||||||| |||||||||||||| | |||||||||||||||| | ||    
T  33367 attatctactatttcaacaatcaattttagtttcaaaccctaatt-ctacaacatcaaaacctattaacaactacacgtttaaaccctttttcaggatta 33465  T
Q  327 tatactcatgattaaagaaggttagtctcacccttaccttagattggttga 377  Q
     ||||| |||||||||||||||||||| |||||||||||||||||| ||||    
T  33466 aatacttatgattaaagaaggttagtcccacccttaccttagattgattga 33516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 66; Significance: 7e-29; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 228 - 372
Target Start/End: Original strand, 62631 - 62775
Alignment:
Q  228 attacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaacta 326  Q
    |||| |||||||||| ||||||||||||    |  |||||||||| ||| ||||||||||| |||||||||| ||||| |||||||||||||||| | ||    
T  62631 attatctactctttctacaatcaattttagtttcaaaccctaatt-ctacaacatcaaaacctattaacaaccacaaggttaaaccctttttcaggatta 62729  T
Q  327 tatactcatgattaaagaaggttagtctcacccttaccttagattg 372  Q
     ||||| ||||||||||||||||||||||| |||||||||||||||    
T  62730 catacttatgattaaagaaggttagtctcatccttaccttagattg 62775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 262 - 372
Target Start/End: Original strand, 1966 - 2077
Alignment:
Q  262 taaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcaccct 360  Q
    |||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||| ||||  || ||| |||| |||| | ||||||||||||    
T  1966 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcaccct 2065  T
Q  361 taccttagattg 372  Q
    ||||||||||||    
T  2066 taccttagattg 2077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 262 - 372
Target Start/End: Complemental strand, 186302 - 186191
Alignment:
Q  262 taaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcaccct 360  Q
    |||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||| ||||  || ||| |||| |||| | ||||||||||||    
T  186302 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcaccct 186203  T
Q  361 taccttagattg 372  Q
    ||||||||||||    
T  186202 taccttagattg 186191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 63; Significance: 4e-27; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 263 - 464
Target Start/End: Original strand, 19154 - 19368
Alignment:
Q  263 aaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcaccctt 361  Q
    |||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||  ||| |  |||| |||| ||||||| |||||||    
T  19154 aacccttatttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccaccctt 19253  T
Q  362 accttagattggttgaattcagactctataagcttgctcc--------------tcttctcttctctgacttctcactttctccccttttctcccaaaaa 447  Q
    || ||||||| | | |  || ||||||| ||| |||||||              ||||||||||| ||||||||||||||||||| |||||||||||||     
T  19254 acgttagattagatca--tcggactctacaagattgctcctcttctcacaagattcttctcttctatgacttctcactttctccctttttctcccaaaag 19351  T
Q  448 cagtttctacgtattct 464  Q
     ||||||||||||||||    
T  19352 tagtttctacgtattct 19368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 270 - 315
Target Start/End: Original strand, 19115 - 19160
Alignment:
Q  270 atttctataacatcaaaactattaacaactacaagcttaaaccctt 315  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||    
T  19115 atttctataacatcaaaactatcaacaactacaaggttaaaccctt 19160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 228 - 368
Target Start/End: Complemental strand, 10585 - 10445
Alignment:
Q  228 attacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaacta 326  Q
    |||| |||||||||| ||||||||||||    |  |||||||||| ||| ||||||||||| |||||||||||||||  |||||||||||||||| | ||    
T  10585 attatctactctttctacaatcaattttagtttcaaaccctaatt-ctacaacatcaaaacctattaacaactacaatgttaaaccctttttcaggatta 10487  T
Q  327 tatactcatgattaaagaaggttagtctcacccttaccttag 368  Q
     ||||| |||||||||||||||||||| ||||||||||||||    
T  10486 catacttatgattaaagaaggttagtcccacccttaccttag 10445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 293 - 368
Target Start/End: Original strand, 3853 - 3927
Alignment:
Q  293 aacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttag 368  Q
    |||||||||| | ||||| |||||||||| | || ||||| ||| |||||||||||| ||| ||||||||||||||    
T  3853 aacaactacatg-ttaaatcctttttcaggattacatacttatgtttaaagaaggttggtcacacccttaccttag 3927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 59; Significance: 1e-24; HSPs: 3)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 263 - 368
Target Start/End: Original strand, 4369 - 4474
Alignment:
Q  263 aaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcaccctt 361  Q
    |||||||||| ||| ||||||||||| |||||||||||||||| ||||||| |||||| | | |||||||| |||||||||||||||||||| |||||||    
T  4369 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccttttttcgggattatatacttatgattaaagaaggttagtcccaccctt 4467  T
Q  362 accttag 368  Q
    |||||||    
T  4468 accttag 4474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 254
Target Start/End: Original strand, 12103 - 12179
Alignment:
Q  177 acctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaattt 254  Q
    ||||||| ||||||||||| |||||| ||| | |||| ||||||||| ||  ||||||||||||| ||||||||||||    
T  12103 acctatgattattctacaacctgaacatcaattcttatgttaattcattgggttacctactcttt-aacaatcaattt 12179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 242 - 290
Target Start/End: Original strand, 12236 - 12284
Alignment:
Q  242 caacaatcaattttgcaatttaaccctaatttctataacatcaaaacta 290  Q
    |||||||||||| | ||| |||||| |||||||||||||||||||||||    
T  12236 caacaatcaattctacaaattaaccttaatttctataacatcaaaacta 12284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 263 - 368
Target Start/End: Original strand, 293 - 398
Alignment:
Q  263 aaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcaccctt 361  Q
    |||||||||| ||| ||||||||||| |||||||||||||||| |||||||||||||||| | || ||||| ||||||||||||| ||| ||||||||||    
T  293 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaagattaatctcaccctt 391  T
Q  362 accttag 368  Q
    |||||||    
T  392 accttag 398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 263 - 368
Target Start/End: Original strand, 174169 - 174274
Alignment:
Q  263 aaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcaccctt 361  Q
    |||||||||| ||| ||||||||||| |||||||||||||||| |||||||||||||||| | || ||||| |||||||||||||||||||| |||||||    
T  174169 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaccctt 174267  T
Q  362 accttag 368  Q
    || ||||    
T  174268 actttag 174274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 210 - 464
Target Start/End: Original strand, 19750 - 20004
Alignment:
Q  210 cttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaacta--ttaacaactacaagctt 307  Q
    |||||||||| | ||||  ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    |||||| ||| | ||    
T  19750 cttacgttaacttaatggtttacctactctttcaacaaccaattttgcaa-ttaaccctaatttctataacatcaaaactaacaaaacaacaacatg-tt 19847  T
Q  308 aaaccctttttcagaactata-tactcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttc 406  Q
    |||||| |||| ||||  |||  || ||| |||| ||||   |||||  |||||||||||||||| | |||  || |  ||||  || ||||||||||||    
T  19848 aaacccctttttagaatcatacaacccattattagagaaatctagtcctacccttaccttagattagatga--tcggtttctacgagattgctcctcttc 19945  T
Q  407 tc-ttctctgacttctcactttctccccttttctcccaaaaacagtttctacgtattct 464  Q
    || |||||||||| ||||||||   ||||||||||||||||||||  | ||||||||||    
T  19946 tctttctctgactactcacttttctcccttttctcccaaaaacagcatttacgtattct 20004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 307 - 464
Target Start/End: Original strand, 5445 - 5602
Alignment:
Q  307 taaaccctttttcagaactatata-ctcatgattaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctctt 405  Q
    ||||||||||||||||| |||| | ||||| |||| |||| | ||||| ||||||||||||||||| | ||| |   | |||||  || |||||||||||    
T  5445 taaaccctttttcagaattatacaactcattattagagaaaggtagtcccacccttaccttagattagatgattg--gtctctacgagattgctcctctt 5542  T
Q  406 ctctt-ctctgacttctcactttctccccttttctcccaaaaacagtttctacgtattct 464  Q
    ||||| |||||||||||||||||   |||||||||||||||| ||| ||  |||||||||    
T  5543 ctctttctctgacttctcacttttctcccttttctcccaaaagcagctttcacgtattct 5602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 210 - 320
Target Start/End: Original strand, 29207 - 29316
Alignment:
Q  210 cttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaa-ctattaacaactacaagctta 308  Q
    |||||||||||||||||  |||||||||||||||||||| || ||  |||| ||||| |||| ||| ||||||||||| ||||||||||||||||| |||    
T  29207 cttacgttaattcaatggtttacctactctttcaacaattaaatt--caatataaccttaatctctttaacatcaaaacctattaacaactacaaggtta 29304  T
Q  309 aaccctttttca 320  Q
    ||||||||||||    
T  29305 aaccctttttca 29316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 70 - 446
Target Start/End: Complemental strand, 6802 - 6426
Alignment:
Q  70 tcacccgccgtggtgagcgatgacaaacagttctacgggaagaaatctattttttcccaaaaacccaatttt-caaccacccaaattccaaattcaaaag 168  Q
    |||| |||||||| |||||||||| ||||  |||||| ||||||| |  ||||   |||||||| ||||||| ||||||||||||| |||||||  | ||    
T  6802 tcactcgccgtggcgagcgatgacgaacaactctacgagaagaaaccagttttcagccaaaaactcaatttttcaaccacccaaatcccaaatttgatag 6703  T
Q  169 gaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaattttgcaattt--aacc 266  Q
     |||||| || |||| ||| |||||||  |||||   | |  |||| ||||||||   |||||||||||||||||||||||||||||  |||||  || |    
T  6702 aaaactctacttatgattactctacaacatgaacacgaattattaccttaattcatctaattacctactctttcaacaatcaatttt--aatttcaaaac 6605  T
Q  267 ctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactatata-ctcatgattaaagaaggttagtctcacccttacct 365  Q
    |||||||||  |  ||||||| ||  || ||| ||| | |||||||| |||||||||  ||| | | ||| |||| |||| | ||||| | || ||||||    
T  6604 ctaatttctcaacaatcaaaattaacaa-aacaacatg-ttaaaccccttttcagaatcatacaacccattattagagaaaggtagtcccgcctttacct 6507  T
Q  366 tagattggttgaattcagactctataagcttgctcctcttctc-ttctctgacttctcactttctccccttttctcccaaaa 446  Q
    |||||| | ||| ||||||||||| ||||||||| |||| ||| |||||||||||||||||| || ||||| ||||||||||    
T  6506 tagattagatgatttcagactctacaagcttgcttctctcctctttctctgacttctcacttgct-cccttgtctcccaaaa 6426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 56; Significance: 7e-23; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 126 - 253
Target Start/End: Original strand, 20908 - 21034
Alignment:
Q  126 ccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaat 225  Q
    |||||| ||| | ||||| | |||||||| |||||||  | ||||||||||||||||||||||||||||  |||||| ||| | |||| ||||||||| |    
T  20908 ccaaaagccccaatttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcatt 21007  T
Q  226 gaattacctactctttcaacaatcaatt 253  Q
    |||||||||||||||| |||||||||||    
T  21008 gaattacctactcttt-aacaatcaatt 21034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 167 - 253
Target Start/End: Original strand, 33964 - 34049
Alignment:
Q  167 aggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaatt 253  Q
    |||||||||||||||||||||||||||  ||||||| ||| | |||| ||||||||| ||||||||||||| ||| |||||||||||    
T  33964 aggaaactcaacctatgtttattctacggtctgaacttcaattcttatgttaattcattgaattacctactgttt-aacaatcaatt 34049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 126 - 253
Target Start/End: Complemental strand, 29457 - 29331
Alignment:
Q  126 ccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaat 225  Q
    |||||| ||| | ||||| | |||||||| |||||||  | ||||||||||||||||||||||||||||  |||||| ||| | |||| ||||||||| |    
T  29457 ccaaaagccccaatttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcatt 29358  T
Q  226 gaattacctactctttcaacaatcaatt 253  Q
    |||||||||||||||| |||||||||||    
T  29357 gaattacctactcttt-aacaatcaatt 29331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 263 - 368
Target Start/End: Original strand, 8769 - 8874
Alignment:
Q  263 aaccctaatttctataacatcaaaact-attaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcaccctt 361  Q
    |||||||||| ||| |||||||||||  ||||||| ||||||| |||||||||||||||| | || ||||| |||||||||||||||||||| |||||||    
T  8769 aaccctaatt-ctacaacatcaaaaccgattaacatctacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaccctt 8867  T
Q  362 accttag 368  Q
    |||||||    
T  8868 accttag 8874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 262 - 371
Target Start/End: Complemental strand, 18046 - 17936
Alignment:
Q  262 taaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcaccct 360  Q
    |||||||||||||||||||||||||||||  |||||||||||| ||||| |||||||||||| ||||  ||| |  |||| |||| ||||||| ||||||    
T  18046 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaatcctttttcagaattatacaacttagaattagagaaagttagtcccaccct 17947  T
Q  361 taccttagatt 371  Q
    |||||||||||    
T  17946 taccttagatt 17936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 263 - 368
Target Start/End: Complemental strand, 10032 - 9927
Alignment:
Q  263 aaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcaccctt 361  Q
    |||||||||| ||| ||||||||||| |||||  |||||||||  ||||||||||||||||| || ||||| |||||||||||||||||||| |||||||    
T  10032 aaccctaatt-ctacaacatcaaaacctattagaaactacaaggctaaaccctttttcagaattacatacttatgattaaagaaggttagtcccaccctt 9934  T
Q  362 accttag 368  Q
    |||||||    
T  9933 accttag 9927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 53; Significance: 4e-21; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 228 - 377
Target Start/End: Complemental strand, 16561 - 16409
Alignment:
Q  228 attacctactctttcaacaa-tcaattttgcaatttaaccctaatttctataa-catcaaaactattaacaactacaagcttaaaccctttttcagaact 325  Q
    |||||||||||||||||||| ||||||||    | |||||||||||||| ||| ||||||| |||  |||||||||||| |||||||||||||||||| |    
T  16561 attacctactctttcaacaaatcaattttaatctctaaccctaatttctctaatcatcaaacctaacaacaactacaaggttaaaccctttttcagaatt 16462  T
Q  326 ata-tactcatgattaaagaaggttagtctcacccttaccttagattggttga 377  Q
    |||  || ||| |||| | || |||| ||||||||||||||||||||| ||||    
T  16461 atacaacccattattagataaagttaatctcacccttaccttagattgattga 16409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 228 - 338
Target Start/End: Complemental strand, 18999 - 18887
Alignment:
Q  228 attacctactctttcaacaatcaattttgcaatttaa---ccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaac 324  Q
    ||||||||| |||||||||||||| || |||||||||   |||||| ||||||| |||||||||||| |||||||||||  ||||||| |||||||||||    
T  18999 attacctacactttcaacaatcaaatt-gcaatttaaaaaccctaacttctatagcatcaaaactatcaacaactacaaaattaaaccttttttcagaac 18901  T
Q  325 tatatactcatgat 338  Q
     ||||||| |||||    
T  18900 catatacttatgat 18887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 228 - 340
Target Start/End: Complemental strand, 16715 - 16602
Alignment:
Q  228 attacctactctttcaacaatcaattttgcaatttaa--ccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaact 325  Q
    ||||||||| |||| ||||||||| || |||||||||  |||||| ||||||| |||||||||||| |||||||| ||  |||||| ||||||||||||     
T  16715 attacctacactttgaacaatcaaatt-gcaatttaaaaccctaacttctatagcatcaaaactatcaacaactataaaattaaactctttttcagaaca 16617  T
Q  326 atatactcatgatta 340  Q
    ||||||| |||||||    
T  16616 atatacttatgatta 16602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 228 - 377
Target Start/End: Complemental strand, 18844 - 18691
Alignment:
Q  228 attacctactctttcaacaa-tcaattttgcaatttaaccctaatttctataa-catcaaaac-tattaacaactacaagcttaaaccctttttcagaac 324  Q
    |||||||||||||||||||| ||||||||    | |||||||||||||| ||| |||||  || ||  ||||||||||||  |||||| ||||| ||||     
T  18844 attacctactctttcaacaaatcaattttaatctctaaccctaatttctctaatcatcatgacctaacaacaactacaaggctaaaccgtttttaagaat 18745  T
Q  325 tatata-ctcatgattaaagaaggttagtctcacccttaccttagattggttga 377  Q
    |||| | ||||| |||| |||| |||| || |||||| ||||||||||||||||    
T  18744 tatacaactcattattagagaaagttaatcccaccctcaccttagattggttga 18691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 52; Significance: 2e-20; HSPs: 3)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 128 - 287
Target Start/End: Original strand, 2627 - 2786
Alignment:
Q  128 aaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatga 227  Q
    |||||||||| ||||| | || ||||| |||||||  | |||||||| ||| |||| |||||| |||||||||||  || |  |||| ||||||||        
T  2627 aaaaacccaaatttcatctactcaaatcccaaatttgataggaaacttaacgtatgattattcaacaatctgaacaccaattattaccttaattcatcag 2726  T
Q  228 attacctactctttcaacaatcaattttgcaattt--aaccctaatttctataacatcaaaa 287  Q
    ||||||||||||||||||||||||||||  |||||  |||||||||||||||||||||||||    
T  2727 attacctactctttcaacaatcaatttt--aatttcaaaccctaatttctataacatcaaaa 2786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 266 - 371
Target Start/End: Original strand, 2831 - 2937
Alignment:
Q  266 cctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcacccttacc 364  Q
    ||||||| |||||||||| ||||||  |||||||||||| |||||||||||||||||| ||||  || ||| |||| |||| | ||||| ||||||||||    
T  2831 cctaattcctataacatcgaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttacc 2930  T
Q  365 ttagatt 371  Q
    |||||||    
T  2931 ttagatt 2937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 2982 - 3035
Alignment:
Q  401 ctcttctcttctct-gacttctcactttctccccttttctcccaaaaacagtttc 454  Q
    |||||||||||||| ||||||| |||||||||| ||||||||||||| |||||||    
T  2982 ctcttctcttctcttgacttcttactttctccc-ttttctcccaaaagcagtttc 3035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 156 - 251
Target Start/End: Complemental strand, 9008 - 8913
Alignment:
Q  156 ccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaa 251  Q
    |||||||||| ||||||||||||||| ||||||||||||| |||||| ||| | |||||||||||||| |  | |||||||||| |||||||||||    
T  9008 ccaaattcaataggaaactcaacctaagtttattctacaacctgaacatcaattcttacgttaattcattcgactacctactctctcaacaatcaa 8913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 290
Target Start/End: Complemental strand, 8854 - 8825
Alignment:
Q  261 ttaaccctaatttctataacatcaaaacta 290  Q
    ||||||||||||||||||||||||||||||    
T  8854 ttaaccctaatttctataacatcaaaacta 8825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 126 - 253
Target Start/End: Original strand, 1748 - 1874
Alignment:
Q  126 ccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaat 225  Q
    |||||| ||| | ||||| | |||||||| | |||||  | ||||||||||||||||||||||||||||  |||||| ||| | |||| ||||||||| |    
T  1748 ccaaaagccccaatttcatcaacccaaatccaaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcatt 1847  T
Q  226 gaattacctactctttcaacaatcaatt 253  Q
    |||||||||||||||| |||||||||||    
T  1848 gaattacctactcttt-aacaatcaatt 1874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 147 - 250
Target Start/End: Complemental strand, 21997 - 21895
Alignment:
Q  147 acccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaaca 246  Q
    |||||||| |||||||  | ||||||||||||||||||||||||||||  |||||| ||| | |||| ||||||||| ||||||||||||||||| ||||    
T  21997 acccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacatcaattcttatgttaattcattgaattacctactcttt-aaca 21899  T
Q  247 atca 250  Q
    ||||    
T  21898 atca 21895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 167 - 253
Target Start/End: Original strand, 8812 - 8897
Alignment:
Q  167 aggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaatt 253  Q
    ||||||||||||||||||||||||||||  |||||| ||| | |||| ||||||||| ||||||||||||||||| |||||||||||    
T  8812 aggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctactcttt-aacaatcaatt 8897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 50; Significance: 3e-19; HSPs: 2)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 209 - 290
Target Start/End: Original strand, 10841 - 10921
Alignment:
Q  209 ccttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaacta 290  Q
    |||||| ||||||||||   ||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  10841 ccttacattaattcaatagtttacctactttttcaacaaccaattttgcaatt-aaccctaatttctataacatcaaaacta 10921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 464
Target Start/End: Original strand, 11046 - 11108
Alignment:
Q  402 tcttctcttctctgacttctcactttctccccttttctcccaaaaacagtttctacgtattct 464  Q
    |||||||||||||| |||  || |||||||| |||||||| |||| |||||||||||||||||    
T  11046 tcttctcttctctggcttaccattttctccctttttctccaaaaagcagtttctacgtattct 11108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 268 - 368
Target Start/End: Complemental strand, 6519 - 6419
Alignment:
Q  268 taatttctataacatcaaaactattaacaactacaa-gcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttacctt 366  Q
    |||| ||||||||||||||||||  ||||||||||| | ||||||||||||| |||| || ||||| |||||||| ||||||||||| ||||||||||||    
T  6519 taatctctataacatcaaaactaacaacaactacaaaggttaaacccttttt-agaattacatacttatgattaatgaaggttagtcccacccttacctt 6421  T
Q  367 ag 368  Q
    ||    
T  6420 ag 6419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 128 - 253
Target Start/End: Original strand, 35305 - 35430
Alignment:
Q  128 aaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatga 227  Q
    |||| |||||||| || | ||| |||| |||||||||| ||||||||||||||||||||||||||||| |||||| ||| | |||| ||||||| | ||     
T  35305 aaaatcccaatttacatcaacctaaatcccaaattcaataggaaactcaacctatgtttattctacaacctgaacatcaattcttatgttaatttattgg 35404  T
Q  228 attacctactctttcaacaatcaatt 253  Q
    ||||| ||| |||| ||||| |||||    
T  35405 attacatacacttttaacaaccaatt 35430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 262 - 318
Target Start/End: Complemental strand, 23988 - 23932
Alignment:
Q  262 taaccctaatttctataacatcaaaactattaacaactacaagcttaaacccttttt 318  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  23988 taaccctaatttctataacatcaaaactaataacaactacaaggttaaacccttttt 23932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 262 - 372
Target Start/End: Complemental strand, 17627 - 17516
Alignment:
Q  262 taaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactatatact-catgattaaagaaggttagtctcaccct 360  Q
    |||||||||||||||||||| ||||||||  |||||||||||| |||||||||||||||||| |||| | | ||| |||| | || | |||||  |||||    
T  17627 taaccctaatttctataacagcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaatccattattagaaaaagctagtccgaccct 17528  T
Q  361 taccttagattg 372  Q
    ||||||||||||    
T  17527 taccttagattg 17516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 409 - 446
Target Start/End: Original strand, 23710 - 23747
Alignment:
Q  409 ttctctgacttctcactttctccccttttctcccaaaa 446  Q
    |||||||||||||||||||||||| |||||||||||||    
T  23710 ttctctgacttctcactttctccctttttctcccaaaa 23747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 262 - 368
Target Start/End: Original strand, 18221 - 18328
Alignment:
Q  262 taaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcaccct 360  Q
    |||||||||||||||||| |||||||| |  |||||||||||| |||||||||||||||||| ||||  || ||| |||| |||| | ||||| ||||||    
T  18221 taaccctaatttctataaaatcaaaaccaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcacaccct 18320  T
Q  361 taccttag 368  Q
    ||||||||    
T  18321 taccttag 18328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 128 - 251
Target Start/End: Original strand, 21935 - 22058
Alignment:
Q  128 aaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatga 227  Q
    |||||||||| ||||| | |||||||| |||||||  | |||||||| |||||||| ||||||||||| ||||||  || | ||||| ||||||||        
T  21935 aaaaacccaaatttcatctacccaaatcccaaatttgataggaaacttaacctatgattattctacaacctgaacaccaattcttaccttaattcatcag 22034  T
Q  228 attacctactctttcaacaatcaa 251  Q
    ||||||||||||||||||||||||    
T  22035 attacctactctttcaacaatcaa 22058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 262 - 368
Target Start/End: Complemental strand, 5411 - 5304
Alignment:
Q  262 taaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcaccct 360  Q
    |||||||||| |||||||||||||||| |  |||||||||||| ||||||||||||| |||| ||||  ||| |  |||| |||| ||||||| ||||||    
T  5411 taaccctaatatctataacatcaaaacgaacaacaactacaaggttaaaccctttttaagaattatacaacttaaaattagagaaagttagtcccaccct 5312  T
Q  361 taccttag 368  Q
    ||||||||    
T  5311 taccttag 5304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 402 - 463
Target Start/End: Complemental strand, 5162 - 5101
Alignment:
Q  402 tcttctcttctctgacttctcactttctccccttttctcccaaaaacagtttctacgtattc 463  Q
    ||||||||||||||||||||||||||||||  |||||||||||||   ||||||||||||||    
T  5162 tcttctcttctctgacttctcactttctccatttttctcccaaaagttgtttctacgtattc 5101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 431
Target Start/End: Complemental strand, 5259 - 5230
Alignment:
Q  402 tcttctcttctctgacttctcactttctcc 431  Q
    ||||||||||||||||||||||||||||||    
T  5259 tcttctcttctctgacttctcactttctcc 5230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 253
Target Start/End: Original strand, 11034 - 11160
Alignment:
Q  126 ccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaat 225  Q
    |||||| ||| | ||||| | ||| |||| |||||||  | |||||||||||  |||||||||||||||  |||||| ||| | |||| ||||||||| |    
T  11034 ccaaaagccccaatttcatcaaccaaaatcccaaatttgataggaaactcaagatatgtttattctacagcctgaacttcaattcttatgttaattcatt 11133  T
Q  226 gaattacctactctttcaacaatcaatt 253  Q
    |||||||||||||||| |||||||||||    
T  11134 gaattacctactcttt-aacaatcaatt 11160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 263 - 312
Target Start/End: Original strand, 1264 - 1313
Alignment:
Q  263 aaccctaatttctataacatcaaaactattaacaactacaagcttaaacc 312  Q
    |||||| |||||||||||||||||||||| |||||||| ||| |||||||    
T  1264 aacccttatttctataacatcaaaactatcaacaactataaggttaaacc 1313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 263 - 312
Target Start/End: Original strand, 6770 - 6819
Alignment:
Q  263 aaccctaatttctataacatcaaaactattaacaactacaagcttaaacc 312  Q
    |||||| |||||||||||||||||||||| |||||||| ||| |||||||    
T  6770 aacccttatttctataacatcaaaactatcaacaactataaggttaaacc 6819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 253
Target Start/End: Complemental strand, 70094 - 69968
Alignment:
Q  126 ccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaat 225  Q
    |||||| ||| | ||||| | |||||||| |||||||  | |||||||||||||||| ||| |||||||  |||||| ||| | |||| ||||||||| |    
T  70094 ccaaaagccccaatttcatcaacccaaatcccaaatttgataggaaactcaacctattttttttctacagcctgaacttcaattcttatgttaattcatt 69995  T
Q  226 gaattacctactctttcaacaatcaatt 253  Q
    | |||||||||||||| |||||||||||    
T  69994 ggattacctactcttt-aacaatcaatt 69968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 402 - 463
Target Start/End: Complemental strand, 2154 - 2093
Alignment:
Q  402 tcttctcttctctgacttctcactttctccccttttctcccaaaaacagtttctacgtattc 463  Q
    ||||||||||||||||||||||||||||||  |||||||||||||   ||||||||||||||    
T  2154 tcttctcttctctgacttctcactttctccatttttctcccaaaagttgtttctacgtattc 2093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 281 - 368
Target Start/End: Complemental strand, 2287 - 2199
Alignment:
Q  281 atcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcacccttaccttag 368  Q
    ||||||||||  |||||||||||| |||||||||||||||||| ||||  ||| |  |||| ||||  |||||| ||||||||||||||    
T  2287 atcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaaattagtcccacccttaccttag 2199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 262 - 367
Target Start/End: Complemental strand, 2562 - 2454
Alignment:
Q  262 taaccctaatttctataacatcaaaactattaacaactacaagcttaaacc--ctttttcagaactata-tactcatgattaaagaaggttagtctcacc 358  Q
    ||||||||||||||||||||||||||||| |||| |||||||| |||||||   |||||||||| ||||  || ||| |||| |||| | ||||| ||||    
T  2562 taaccctaatttctataacatcaaaactaataacgactacaaggttaaaccatttttttcagaattatacaacccattattagagaaagctagtcccacc 2463  T
Q  359 cttacctta 367  Q
    |||||||||    
T  2462 cttacctta 2454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 290
Target Start/End: Original strand, 40037 - 40080
Alignment:
Q  247 atcaattttgcaatttaaccctaatttctataacatcaaaacta 290  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  40037 atcaattctgcaatttaaccctaatttctataacatcaaaacta 40080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 126 - 253
Target Start/End: Original strand, 4847 - 4966
Alignment:
Q  126 ccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaat 225  Q
    |||||| ||| | ||||| | |||| |||||||||||  ||||||||||||||||||||||||||||       ||| ||| | |||| ||||||||| |    
T  4847 ccaaaagccccaatttcatcaaccctaattccaaatttgaaaggaaactcaacctatgtttattcta-------aacttcaattcttatgttaattcatt 4939  T
Q  226 gaattacctactctttcaacaatcaatt 253  Q
    | |||||||||||||| |||||||||||    
T  4940 ggattacctactcttt-aacaatcaatt 4966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 7251 - 7182
Alignment:
Q  126 ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctaca 194  Q
    |||||||||||||||| || |||||||||  |||||||  | ||||||||||||||||||||||||||||    
T  7251 ccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 7182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 126 - 253
Target Start/End: Original strand, 4847 - 4966
Alignment:
Q  126 ccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaat 225  Q
    |||||| ||| | ||||| | |||| |||||||||||  ||||||||||||||||||||||||||||       ||| ||| | |||| ||||||||| |    
T  4847 ccaaaagccccaatttcatcaaccctaattccaaatttgaaaggaaactcaacctatgtttattcta-------aacttcaattcttatgttaattcatt 4939  T
Q  226 gaattacctactctttcaacaatcaatt 253  Q
    | |||||||||||||| |||||||||||    
T  4940 ggattacctactcttt-aacaatcaatt 4966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 228 - 377
Target Start/End: Original strand, 6329 - 6480
Alignment:
Q  228 attacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaa--ctattaacaactacaagcttaaaccctttttcagaact 325  Q
    |||| |||||||||| ||||||||||||    |  |||||||||| ||| ||||| ||||  |||| |||||||||||| |||| ||||||||||||| |    
T  6329 attatctactctttctacaatcaattttagtttcaaaccctaatt-ctacaacattaaaaacctataaacaactacaagattaatccctttttcagaatt 6427  T
Q  326 ata-tactcatgattaaagaaggttagtctcacccttaccttagattggttga 377  Q
    | |  |||||| |||| |||| | |||||| ||||||||||||||||| ||||    
T  6428 acacaactcattattagagaaagctagtcttacccttaccttagattgattga 6480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 275 - 371
Target Start/End: Complemental strand, 61940 - 61844
Alignment:
Q  275 tataacatcaaaactattaacaactacaagcttaaaccctttttcagaactatata-ctcatgattaaagaaggttagtctcacccttaccttagatt 371  Q
    ||||||||||||||||  |||||||||||| ||||| |||||| ||||| |||| | || |  |||| |||| |||||||||||||||||||||||||    
T  61940 tataacatcaaaactaacaacaactacaaggttaaatcctttt-cagaattatacaacttagaattagagaaagttagtctcacccttaccttagatt 61844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 406 - 458
Target Start/End: Complemental strand, 46055 - 46003
Alignment:
Q  406 ctcttctctgacttctcactttctccccttttctcccaaaaacagtttctacg 458  Q
    ||||||||||||||||||||||||||| || |||||||||| |||||| ||||    
T  46055 ctcttctctgacttctcactttctccctttatctcccaaaagcagtttgtacg 46003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 398 - 453
Target Start/End: Original strand, 5470 - 5526
Alignment:
Q  398 ctcctctt-ctcttctctgacttctcactttctccccttttctcccaaaaacagttt 453  Q
    |||||||| ||||| ||||||||||||||||||||| || |||||||||||||||||    
T  5470 ctcctcttgctcttttctgacttctcactttctccctttatctcccaaaaacagttt 5526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 401 - 446
Target Start/End: Complemental strand, 12484 - 12439
Alignment:
Q  401 ctcttctcttctct-gacttctcactttctccccttttctcccaaaa 446  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||    
T  12484 ctcttctcttctcttgacttctcactttct-cccttttctcccaaaa 12439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1434 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 312 - 378
Target Start/End: Complemental strand, 1414 - 1348
Alignment:
Q  312 cctttttcagaactatata-ctcatgattaaagaaggttagtctcacccttaccttagattggttgaa 378  Q
    |||||||||||| |||| | ||||| ||||||||||||||||| ||||||||||||||||||| ||||    
T  1414 cctttttcagaattatagaactcat-attaaagaaggttagtcccacccttaccttagattggatgaa 1348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 3778 - 3852
Alignment:
Q  129 aaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 202  Q
    ||||||||||||| || |||||||||  |||||||  | |||||||||||||||||||||||| |||| ||||||    
T  3778 aaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattcaacaacctgaac 3852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 6976 - 6910
Alignment:
Q  185 ttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaa 251  Q
    ||||||||||| |||||| ||| | |||| ||||||||| |||||||| ||| ||||||||||||||    
T  6976 ttattctacaacctgaacatcaattcttatgttaattcattgaattacatacactttcaacaatcaa 6910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 278 - 371
Target Start/End: Original strand, 13911 - 14005
Alignment:
Q  278 aacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcacccttaccttagatt 371  Q
    |||||||||||||  ||||||| |||| |||||||||||||||||| | ||  || ||| |||| |||| | ||||| |||||||||||||||||    
T  13911 aacatcaaaactaacaacaacttcaaggttaaaccctttttcagaattttacaacccattattagagaaagctagtcccacccttaccttagatt 14005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 453
Target Start/End: Original strand, 14032 - 14084
Alignment:
Q  402 tcttctcttctct-gacttctcactttctccccttttctcccaaaaacagttt 453  Q
    ||||||||||||| | ||| |||||||||||| ||||||||||||| ||||||    
T  14032 tcttctcttctcttggcttatcactttctccctttttctcccaaaagcagttt 14084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 401 - 446
Target Start/End: Original strand, 8018 - 8063
Alignment:
Q  401 ctcttctcttctctgacttctcactttctccccttttctcccaaaa 446  Q
    |||||||||||||| ||||||||||||||||| |||||||| ||||    
T  8018 ctcttctcttctcttacttctcactttctccctttttctccaaaaa 8063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0488 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0488
Description:

Target: scaffold0488; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 404 - 453
Target Start/End: Original strand, 12581 - 12630
Alignment:
Q  404 ttctcttctctgacttctcactttctccccttttctcccaaaaacagttt 453  Q
    ||||||||||||||||||||||||| ||| || |||||||||| ||||||    
T  12581 ttctcttctctgacttctcactttcgccctttatctcccaaaagcagttt 12630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 401 - 446
Target Start/End: Complemental strand, 5289 - 5244
Alignment:
Q  401 ctcttctcttctctgacttctcactttctccccttttctcccaaaa 446  Q
    |||||||||||||| ||||||||||||||||| |||||||| ||||    
T  5289 ctcttctcttctcttacttctcactttctccctttttctccaaaaa 5244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000009; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 169251 - 169328
Alignment:
Q  126 ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 202  Q
    |||||||||||||||| || |||||||||  |||||||  | |||||||| |||||||| ||||||||||| ||||||    
T  169251 ccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaac 169328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 176604 - 176681
Alignment:
Q  126 ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 202  Q
    |||||||||||||||| || |||||||||  |||||||  | |||||||| |||||||| ||||||||||| ||||||    
T  176604 ccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaac 176681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 337 - 408
Target Start/End: Original strand, 77709 - 77778
Alignment:
Q  337 attaaagaaggttagtctcacccttaccttagattggttgaattcagactctataagcttgctcctcttctc 408  Q
    |||| |||| ||||||||||||||||||||||||| | |||  |||||||||| ||| || |||||||||||    
T  77709 attagagaaagttagtctcacccttaccttagattagatga--tcagactctacaagattactcctcttctc 77778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 194
Target Start/End: Original strand, 18406 - 18474
Alignment:
Q  126 ccaaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctaca 194  Q
    |||||| ||| | ||||| | |||||||| |||||||  | ||||||||||||||||||||||||||||    
T  18406 ccaaaagccccactttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctaca 18474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 277 - 320
Target Start/End: Original strand, 8085 - 8129
Alignment:
Q  277 taacatcaaaac-tattaacaactacaagcttaaaccctttttca 320  Q
    |||||||||||| |||||||||||||||| |||||||||||||||    
T  8085 taacatcaaaacctattaacaactacaaggttaaaccctttttca 8129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 228 - 315
Target Start/End: Original strand, 20112 - 20199
Alignment:
Q  228 attacctactctttcaacaatcaattttgcaattt--aaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctt 315  Q
    |||| ||| |||||| ||||||||||||  |||||  |||||||||| ||| ||||||||||| |||||||||||||||| ||||||||||    
T  20112 attatctattctttctacaatcaatttt--aatttcaaaccctaatt-ctaaaacatcaaaacctattaacaactacaaggttaaaccctt 20199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 408
Target Start/End: Original strand, 5578 - 5724
Alignment:
Q  263 aaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccc--tttttcagaactata-tactcatgattaaagaaggttagtctcacc 358  Q
    |||||||||| ||| ||||||||||| |||||||||||||||  ||||||||  |||||||||| ||||  || ||| |||| |||| | ||||| ||||    
T  5578 aaccctaatt-ctacaacatcaaaacctattaacaactacaaagttaaaccctttttttcagaattatacaacccattattagagaaagctagtcccacc 5676  T
Q  359 cttaccttagattggttgaattcagactctataagcttgctcctcttctc 408  Q
    ||||||||| ||| | |||  || ||||||| ||| |||||| |||||||    
T  5677 cttaccttaaattagatga--tcggactctacaagattgctcttcttctc 5724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 535
Target Start/End: Original strand, 183105 - 183160
Alignment:
Q  480 tgtaaccctaattctctaatggtctcatctatttataatcactatctgagtttgtt 535  Q
    |||||||||| || ||||||| |||||||||||||||||||  |||| ||||||||    
T  183105 tgtaaccctatttttctaatgttctcatctatttataatcatcatctaagtttgtt 183160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 954 - 1028
Alignment:
Q  128 aaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 202  Q
    |||| ||||||||||| | |||||||| |||||||  | |||||||| |||||||| |||| |||||| ||||||    
T  954 aaaatcccaattttcaccaacccaaatcccaaatttgataggaaacttaacctatgattatcctacaacctgaac 1028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 177 - 255
Target Start/End: Original strand, 2102 - 2180
Alignment:
Q  177 acctatgtttattctacaatctgaacctcattccttacgttaattcaatgaattacctactctttcaacaatcaatttt 255  Q
    ||||||| ||||||||||| ||||||  || |  |||| ||| ||||  | ||||||||||||||||||||||||||||    
T  2102 acctatgattattctacaacctgaacaccaattattaccttagttcatcggattacctactctttcaacaatcaatttt 2180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 374
Target Start/End: Original strand, 2237 - 2306
Alignment:
Q  306 ttaaaccctttttcagaactatata-ctcatgattaaagaaggttagtctcacccttaccttagattggt 374  Q
    |||||||||||||||||| |||| | | ||| |||| |||| | ||||| ||||||||||||||||||||    
T  2237 ttaaaccctttttcagaattatacaacccattattatagaaagctagtcccacccttaccttagattggt 2306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 9909 - 9983
Alignment:
Q  128 aaaaacccaattttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 202  Q
    |||||||||| ||||| | |||||||| |||| ||  | |||||||| |||||||| ||||||||||| ||||||    
T  9909 aaaaacccaaatttcatctacccaaatcccaattttgataggaaacttaacctatgattattctacaacctgaac 9983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 475 - 541
Target Start/End: Original strand, 48410 - 48476
Alignment:
Q  475 tttgttgtaaccctaattctctaatggtctcatctatttataatcactatctgagtttgtttttcac 541  Q
    ||||||||||||||| |||||||||  |||| |||||||||||  || || ||||||||||| ||||    
T  48410 tttgttgtaaccctagttctctaatactctcctctatttataactaccatttgagtttgtttctcac 48476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 453
Target Start/End: Original strand, 5590 - 5631
Alignment:
Q  412 tctgacttctcactttctccccttttctcccaaaaacagttt 453  Q
    |||||||||| |||||||||| ||||||||||||| ||||||    
T  5590 tctgacttcttactttctccctttttctcccaaaagcagttt 5631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 520
Target Start/End: Complemental strand, 35426 - 35381
Alignment:
Q  475 tttgttgtaaccctaattctctaatggtctcatctatttataatca 520  Q
    |||||||||| |||| || ||||||| |||||||||||||||||||    
T  35426 tttgttgtaatcctatttttctaatgttctcatctatttataatca 35381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 337 - 377
Target Start/End: Original strand, 19775 - 19815
Alignment:
Q  337 attaaagaaggttagtctcacccttaccttagattggttga 377  Q
    |||| |||| || ||||||||||||||||||||||||||||    
T  19775 attagagaaagtcagtctcacccttaccttagattggttga 19815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 446
Target Start/End: Original strand, 23067 - 23111
Alignment:
Q  402 tcttctcttctctgacttctcactttctccccttttctcccaaaa 446  Q
    |||||||||| || ||||||||||||||||| |||||||| ||||    
T  23067 tcttctcttcacttacttctcactttctccctttttctccaaaaa 23111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 274 times since January 2019
Visitors: 962