View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: F9334-LTR4-TNT-insertion-5 (Length: 682)

Name: F9334-LTR4-TNT-insertion-5
Description: F9334-LTR4
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] F9334-LTR4-TNT-insertion-5
F9334-LTR4-TNT-insertion-5
[»] chr4 (83 HSPs)
chr4 (256-603)||(43940335-43940682)
chr4 (9-165)||(43940773-43940929)
chr4 (482-603)||(19869707-19869827)
chr4 (482-599)||(7113814-7113930)
chr4 (485-603)||(24577869-24577986)
chr4 (482-599)||(26923773-26923889)
chr4 (494-603)||(38623568-38623676)
chr4 (480-599)||(47649397-47649516)
chr4 (481-603)||(10659115-10659235)
chr4 (481-603)||(10873260-10873380)
chr4 (486-603)||(31624631-31624747)
chr4 (496-603)||(7111062-7111168)
chr4 (489-603)||(26917639-26917752)
chr4 (494-603)||(19871190-19871297)
chr4 (494-603)||(43594749-43594857)
chr4 (499-603)||(8840236-8840339)
chr4 (482-599)||(14270058-14270173)
chr4 (490-591)||(41041564-41041665)
chr4 (489-603)||(8081156-8081269)
chr4 (489-603)||(51943641-51943754)
chr4 (490-591)||(4652794-4652895)
chr4 (484-585)||(6504257-6504357)
chr4 (494-603)||(49645787-49645895)
chr4 (494-603)||(50792655-50792763)
chr4 (491-591)||(49970345-49970445)
chr4 (490-591)||(23419428-23419529)
chr4 (494-603)||(30112170-30112278)
chr4 (482-599)||(30114349-30114465)
chr4 (483-603)||(51940847-51940965)
chr4 (494-602)||(48952788-48952895)
chr4 (534-603)||(43937809-43937878)
chr4 (489-591)||(17360968-17361070)
chr4 (489-599)||(31309420-31309528)
chr4 (490-587)||(20354201-20354297)
chr4 (490-591)||(20787163-20787263)
chr4 (490-599)||(31292715-31292823)
chr4 (542-603)||(40846750-40846811)
chr4 (484-599)||(8941188-8941301)
chr4 (495-589)||(7487074-7487168)
chr4 (489-591)||(34072860-34072961)
chr4 (494-591)||(13534686-13534782)
chr4 (491-591)||(52447208-52447307)
chr4 (494-585)||(6505978-6506068)
chr4 (482-599)||(43304806-43304920)
chr4 (490-591)||(16664490-16664590)
chr4 (491-591)||(30827632-30827723)
chr4 (495-591)||(35044897-35044992)
chr4 (495-591)||(35824336-35824431)
chr4 (491-599)||(43590261-43590368)
chr4 (484-599)||(47805597-47805709)
chr4 (484-599)||(49875679-49875792)
chr4 (481-599)||(20352025-20352141)
chr4 (481-555)||(7489261-7489335)
chr4 (482-599)||(34074922-34075036)
chr4 (482-599)||(41039572-41039687)
chr4 (482-599)||(46719649-46719763)
chr4 (490-591)||(54919234-54919336)
chr4 (490-599)||(50496241-50496352)
chr4 (484-599)||(30823697-30823810)
chr4 (495-591)||(49873561-49873656)
chr4 (481-599)||(23417197-23417313)
chr4 (481-599)||(54921335-54921451)
chr4 (542-599)||(3035892-3035949)
chr4 (484-599)||(13530035-13530147)
chr4 (484-599)||(16666620-16666732)
chr4 (489-561)||(17520082-17520153)
chr4 (486-600)||(23931593-23931704)
chr4 (533-599)||(8939279-8939345)
chr4 (494-599)||(27956538-27956640)
chr4 (561-603)||(50790651-50790693)
chr4 (495-591)||(46717546-46717641)
chr4 (484-599)||(13861882-13861996)
chr4 (484-559)||(17518858-17518932)
chr4 (533-591)||(27962561-27962619)
chr4 (533-599)||(49649337-49649402)
chr4 (482-580)||(52449312-52449410)
chr4 (542-599)||(50494809-50494865)
chr4 (495-587)||(23933681-23933772)
chr4 (484-551)||(4654973-4655040)
chr4 (481-523)||(7489375-7489417)
chr4 (494-559)||(17363033-17363098)
chr4 (499-599)||(35046176-35046272)
chr4 (508-560)||(42180213-42180264)
[»] chr1 (50 HSPs)
chr1 (483-603)||(44299066-44299185)
chr1 (481-603)||(43847688-43847808)
chr1 (481-598)||(4638150-4638264)
chr1 (481-603)||(11757101-11757222)
chr1 (494-600)||(23264092-23264197)
chr1 (500-603)||(4640330-4640432)
chr1 (482-603)||(44110163-44110282)
chr1 (499-599)||(31029909-31030009)
chr1 (490-591)||(10772549-10772650)
chr1 (490-591)||(30838811-30838912)
chr1 (490-591)||(33704411-33704512)
chr1 (494-603)||(43846216-43846324)
chr1 (483-599)||(5328807-5328922)
chr1 (495-599)||(7556108-7556211)
chr1 (499-591)||(48127593-48127685)
chr1 (489-591)||(25655672-25655773)
chr1 (534-603)||(44300175-44300244)
chr1 (490-591)||(44512492-44512593)
chr1 (495-591)||(29522018-29522113)
chr1 (490-591)||(7152724-7152824)
chr1 (495-587)||(36307665-36307758)
chr1 (482-599)||(42159356-42159477)
chr1 (495-587)||(24780881-24780973)
chr1 (495-591)||(35954238-35954333)
chr1 (519-599)||(42159992-42160072)
chr1 (480-599)||(52407333-52407450)
chr1 (477-559)||(31032056-31032138)
chr1 (490-599)||(30303043-30303151)
chr1 (533-599)||(46118157-46118223)
chr1 (490-591)||(21096649-21096749)
chr1 (483-599)||(30301000-30301113)
chr1 (533-589)||(51086624-51086680)
chr1 (495-599)||(52404484-52404587)
chr1 (544-599)||(23258891-23258946)
chr1 (480-559)||(33706550-33706629)
chr1 (484-599)||(35956259-35956371)
chr1 (482-599)||(7154804-7154919)
chr1 (481-599)||(33004462-33004578)
chr1 (480-599)||(30837760-30837874)
chr1 (482-599)||(36732428-36732543)
chr1 (533-591)||(14488893-14488951)
chr1 (533-599)||(21097335-21097399)
chr1 (481-512)||(23258838-23258869)
chr1 (567-597)||(12768194-12768224)
chr1 (533-599)||(29647590-29647656)
chr1 (533-599)||(33006483-33006549)
chr1 (482-559)||(35954145-35954221)
chr1 (567-599)||(34334273-34334305)
chr1 (482-526)||(44510431-44510475)
chr1 (481-517)||(46464581-46464617)
[»] chr7 (82 HSPs)
chr7 (481-603)||(41405937-41406058)
chr7 (482-603)||(33982551-33982671)
chr7 (481-599)||(1602359-1602476)
chr7 (482-599)||(19063904-19064021)
chr7 (497-603)||(37708321-37708426)
chr7 (482-599)||(586122-586238)
chr7 (494-603)||(38229725-38229833)
chr7 (482-599)||(47251966-47252082)
chr7 (485-603)||(38224340-38224457)
chr7 (495-591)||(4859584-4859680)
chr7 (495-591)||(40015747-40015843)
chr7 (496-603)||(41408124-41408230)
chr7 (489-591)||(20119879-20119981)
chr7 (521-603)||(33979400-33979482)
chr7 (494-603)||(584711-584819)
chr7 (494-603)||(1598906-1599013)
chr7 (490-591)||(44459366-44459467)
chr7 (519-600)||(47254710-47254791)
chr7 (495-591)||(41336130-41336226)
chr7 (495-591)||(48683077-48683172)
chr7 (489-603)||(43542525-43542637)
chr7 (489-591)||(44882577-44882678)
chr7 (482-599)||(48684533-48684647)
chr7 (542-603)||(596335-596396)
chr7 (490-591)||(725596-725697)
chr7 (490-591)||(16277636-16277737)
chr7 (494-591)||(9663662-9663758)
chr7 (483-599)||(44456896-44457010)
chr7 (484-599)||(3412676-3412789)
chr7 (491-591)||(33246712-33246811)
chr7 (495-591)||(41858616-41858712)
chr7 (491-599)||(43545129-43545236)
chr7 (495-591)||(46555554-46555650)
chr7 (484-599)||(47505634-47505746)
chr7 (481-599)||(16273907-16274023)
chr7 (481-599)||(41338237-41338353)
chr7 (490-591)||(17968371-17968471)
chr7 (475-599)||(23592531-23592652)
chr7 (490-591)||(28589665-28589766)
chr7 (483-603)||(19233731-19233850)
chr7 (484-599)||(40013623-40013736)
chr7 (482-599)||(21817316-21817429)
chr7 (482-599)||(4861867-4861982)
chr7 (482-599)||(8391439-8391555)
chr7 (494-591)||(42825614-42825710)
chr7 (484-599)||(17286327-17286439)
chr7 (531-591)||(21815258-21815318)
chr7 (484-599)||(46553435-46553548)
chr7 (485-599)||(10934733-10934846)
chr7 (482-599)||(38179659-38179774)
chr7 (482-599)||(41287553-41287667)
chr7 (497-570)||(37624136-37624208)
chr7 (490-591)||(48952239-48952340)
chr7 (480-599)||(723482-723599)
chr7 (482-596)||(4657018-4657124)
chr7 (484-599)||(9659011-9659123)
chr7 (534-597)||(37622736-37622800)
chr7 (484-599)||(41856272-41856385)
chr7 (484-559)||(47906947-47907022)
chr7 (490-591)||(5374552-5374647)
chr7 (533-591)||(18995040-18995098)
chr7 (489-591)||(23594597-23594697)
chr7 (533-591)||(30760125-30760183)
chr7 (494-599)||(46160689-46160786)
chr7 (533-591)||(47909408-47909466)
chr7 (494-599)||(44884718-44884817)
chr7 (482-558)||(20122320-20122396)
chr7 (519-599)||(46934264-46934344)
chr7 (533-599)||(8393381-8393448)
chr7 (481-599)||(48950230-48950346)
chr7 (533-599)||(21729630-21729696)
chr7 (533-599)||(21737400-21737465)
chr7 (533-591)||(48607688-48607746)
chr7 (542-591)||(4924809-4924858)
chr7 (490-587)||(41289636-41289731)
chr7 (547-591)||(3416208-3416252)
chr7 (533-589)||(46000573-46000629)
chr7 (561-600)||(42833966-42834005)
chr7 (533-599)||(48605737-48605801)
chr7 (480-526)||(33244605-33244651)
chr7 (482-551)||(42834002-42834069)
chr7 (534-599)||(46936266-46936331)
[»] chr3 (108 HSPs)
chr3 (482-603)||(50935460-50935580)
chr3 (483-603)||(41889651-41889772)
chr3 (494-599)||(22977839-22977943)
chr3 (481-598)||(48071721-48071837)
chr3 (481-600)||(7041568-7041685)
chr3 (484-599)||(6488922-6489036)
chr3 (489-603)||(50938466-50938579)
chr3 (484-597)||(54410650-54410763)
chr3 (494-603)||(39132385-39132493)
chr3 (482-599)||(42876988-42877104)
chr3 (494-599)||(55136584-55136687)
chr3 (490-591)||(22604719-22604820)
chr3 (482-603)||(22981347-22981466)
chr3 (490-591)||(30043595-30043696)
chr3 (484-597)||(55135197-55135308)
chr3 (481-599)||(43359515-43359633)
chr3 (482-599)||(36465585-36465701)
chr3 (490-591)||(40906003-40906104)
chr3 (490-591)||(44843302-44843403)
chr3 (495-591)||(11121085-11121181)
chr3 (495-591)||(27239166-27239262)
chr3 (495-591)||(37785292-37785388)
chr3 (531-603)||(43357897-43357969)
chr3 (519-603)||(43863120-43863204)
chr3 (482-581)||(42167518-42167616)
chr3 (489-591)||(41101511-41101613)
chr3 (489-603)||(42163299-42163412)
chr3 (482-599)||(43860468-43860583)
chr3 (490-591)||(15084675-15084776)
chr3 (495-591)||(13213299-13213395)
chr3 (495-591)||(53845139-53845235)
chr3 (482-597)||(31999815-31999934)
chr3 (494-603)||(32001173-32001282)
chr3 (489-599)||(54409366-54409475)
chr3 (490-591)||(6177315-6177416)
chr3 (490-591)||(8852254-8852355)
chr3 (490-591)||(37220210-37220311)
chr3 (499-591)||(27320869-27320961)
chr3 (492-576)||(39129068-39129150)
chr3 (481-599)||(13243519-13243635)
chr3 (488-591)||(47913059-47913162)
chr3 (482-599)||(23021971-23022086)
chr3 (482-599)||(52745654-52745769)
chr3 (490-591)||(50548598-50548699)
chr3 (531-603)||(41888606-41888678)
chr3 (481-599)||(2219922-2220038)
chr3 (531-598)||(48073884-48073951)
chr3 (482-599)||(11123591-11123706)
chr3 (489-591)||(27126046-27126148)
chr3 (490-591)||(2217879-2217980)
chr3 (495-580)||(4233163-4233248)
chr3 (490-591)||(38696699-38696799)
chr3 (490-591)||(45169823-45169924)
chr3 (484-599)||(47910953-47911066)
chr3 (484-599)||(50546473-50546586)
chr3 (482-599)||(31311666-31311780)
chr3 (482-599)||(37178242-37178356)
chr3 (533-591)||(38235390-38235448)
chr3 (482-599)||(40908435-40908550)
chr3 (489-591)||(43338222-43338323)
chr3 (482-599)||(53583650-53583765)
chr3 (490-591)||(23019686-23019786)
chr3 (482-559)||(27330113-27330190)
chr3 (490-591)||(40423507-40423606)
chr3 (488-599)||(3890777-3890885)
chr3 (531-591)||(16463798-16463858)
chr3 (503-591)||(41698195-41698283)
chr3 (481-599)||(29894703-29894819)
chr3 (533-591)||(37182385-37182441)
chr3 (561-603)||(2229402-2229444)
chr3 (533-599)||(22428973-22429039)
chr3 (478-580)||(37218163-37218265)
chr3 (501-591)||(42825874-42825964)
chr3 (542-591)||(16008676-16008725)
chr3 (490-591)||(18410060-18410161)
chr3 (490-591)||(51722927-51723027)
chr3 (495-591)||(3892788-3892883)
chr3 (480-599)||(8849750-8849867)
chr3 (484-599)||(30361644-30361756)
chr3 (484-599)||(30438267-30438380)
chr3 (484-599)||(37787209-37787322)
chr3 (484-559)||(44841226-44841301)
chr3 (481-559)||(15082708-15082786)
chr3 (482-599)||(22606791-22606906)
chr3 (482-599)||(41103670-41103785)
chr3 (482-599)||(42827935-42828049)
chr3 (487-600)||(50535960-50536070)
chr3 (484-599)||(4230848-4230961)
chr3 (535-599)||(22732691-22732755)
chr3 (484-599)||(38698755-38698867)
chr3 (483-559)||(45051738-45051814)
chr3 (534-602)||(53778401-53778469)
chr3 (484-599)||(10825749-10825863)
chr3 (481-599)||(18763860-18763975)
chr3 (484-559)||(27128153-27128228)
chr3 (480-559)||(41695912-41695991)
chr3 (483-561)||(22731373-22731451)
chr3 (531-585)||(36471797-36471851)
chr3 (494-559)||(45172698-45172763)
chr3 (482-599)||(51720860-51720975)
chr3 (484-600)||(55219827-55219940)
chr3 (490-526)||(37785261-37785297)
chr3 (481-599)||(50610543-50610659)
chr3 (484-559)||(55413158-55413232)
chr3 (489-555)||(2229437-2229502)
chr3 (533-591)||(30440390-30440448)
chr3 (574-603)||(42880185-42880214)
chr3 (491-599)||(10827737-10827844)
[»] chr5 (57 HSPs)
chr5 (482-603)||(15527228-15527348)
chr5 (484-597)||(6720842-6720955)
chr5 (482-599)||(5102941-5103057)
chr5 (494-603)||(15524123-15524231)
chr5 (485-603)||(37256339-37256456)
chr5 (489-590)||(9591612-9591713)
chr5 (494-599)||(29390937-29391042)
chr5 (490-596)||(745695-745801)
chr5 (483-589)||(29388962-29389068)
chr5 (485-587)||(3033069-3033171)
chr5 (490-597)||(34857951-34858057)
chr5 (494-599)||(8526247-8526351)
chr5 (490-591)||(42612355-42612456)
chr5 (495-591)||(19664770-19664866)
chr5 (501-592)||(6719494-6719584)
chr5 (489-603)||(3036361-3036474)
chr5 (484-599)||(8520240-8520361)
chr5 (489-591)||(37940088-37940190)
chr5 (483-599)||(7179660-7179773)
chr5 (531-603)||(29639371-29639444)
chr5 (490-591)||(37270247-37270347)
chr5 (495-591)||(12499226-12499322)
chr5 (495-591)||(39588266-39588362)
chr5 (481-599)||(27018121-27018237)
chr5 (495-599)||(824928-825029)
chr5 (494-576)||(5099860-5099941)
chr5 (482-599)||(39590671-39590786)
chr5 (494-591)||(20546290-20546387)
chr5 (483-599)||(31547465-31547579)
chr5 (519-603)||(37249692-37249776)
chr5 (484-599)||(37938494-37938607)
chr5 (490-561)||(27020210-27020281)
chr5 (489-591)||(34401517-34401618)
chr5 (488-599)||(15527375-15527483)
chr5 (482-599)||(9593789-9593904)
chr5 (483-599)||(30128626-30128740)
chr5 (482-599)||(822818-822933)
chr5 (482-599)||(9985359-9985473)
chr5 (533-591)||(9987418-9987476)
chr5 (533-591)||(13305565-13305623)
chr5 (489-599)||(34663532-34663641)
chr5 (482-559)||(12501401-12501478)
chr5 (482-559)||(27552662-27552738)
chr5 (534-591)||(31552257-31552314)
chr5 (489-591)||(7181177-7181279)
chr5 (533-591)||(11984523-11984579)
chr5 (480-559)||(19505041-19505119)
chr5 (482-599)||(744072-744187)
chr5 (489-599)||(11076796-11076906)
chr5 (533-599)||(11078391-11078457)
chr5 (482-599)||(20544189-20544304)
chr5 (533-591)||(27550648-27550706)
chr5 (484-599)||(34402111-34402222)
chr5 (482-599)||(19666582-19666697)
chr5 (560-600)||(29640417-29640457)
chr5 (501-599)||(42609923-42610019)
chr5 (573-603)||(5100316-5100346)
[»] chr2 (62 HSPs)
chr2 (482-599)||(21191805-21191922)
chr2 (482-603)||(33182798-33182918)
chr2 (494-603)||(39159856-39159964)
chr2 (494-603)||(39209230-39209338)
chr2 (484-603)||(6319287-6319405)
chr2 (481-597)||(20919092-20919207)
chr2 (488-603)||(14452057-14452171)
chr2 (494-600)||(6322373-6322478)
chr2 (481-603)||(36602961-36603082)
chr2 (484-598)||(38932473-38932585)
chr2 (494-603)||(18248613-18248721)
chr2 (491-599)||(21178504-21178612)
chr2 (494-599)||(24460749-24460853)
chr2 (494-603)||(518051-518160)
chr2 (490-591)||(3907009-3907110)
chr2 (490-591)||(14006154-14006255)
chr2 (481-597)||(27477706-27477822)
chr2 (494-599)||(27479094-27479198)
chr2 (495-591)||(38282367-38282463)
chr2 (494-603)||(20919895-20920004)
chr2 (521-603)||(33178745-33178827)
chr2 (489-603)||(39879923-39880036)
chr2 (484-585)||(7296603-7296703)
chr2 (494-602)||(14454594-14454699)
chr2 (528-592)||(36600735-36600799)
chr2 (484-582)||(24457845-24457943)
chr2 (526-599)||(18246481-18246554)
chr2 (490-591)||(28391907-28392007)
chr2 (494-597)||(10454381-10454485)
chr2 (482-586)||(24520444-24520547)
chr2 (484-599)||(25225345-25225458)
chr2 (482-599)||(1053134-1053248)
chr2 (490-591)||(77703-77804)
chr2 (490-591)||(4738368-4738468)
chr2 (495-591)||(27551702-27551797)
chr2 (484-559)||(519687-519761)
chr2 (481-599)||(38280258-38280374)
chr2 (490-591)||(2292447-2292547)
chr2 (495-591)||(15152384-15152479)
chr2 (499-591)||(25223326-25223417)
chr2 (484-555)||(10455678-10455748)
chr2 (505-591)||(15398831-15398915)
chr2 (534-599)||(1054805-1054870)
chr2 (482-559)||(7575621-7575696)
chr2 (484-599)||(2290386-2290499)
chr2 (528-599)||(6647235-6647306)
chr2 (533-599)||(6644587-6644653)
chr2 (489-599)||(39775145-39775254)
chr2 (483-599)||(15400879-15400992)
chr2 (499-599)||(27549694-27549791)
chr2 (533-599)||(42080843-42080911)
chr2 (484-599)||(75574-75687)
chr2 (484-599)||(39965180-39965293)
chr2 (490-591)||(37726024-37726123)
chr2 (480-599)||(28389952-28390067)
chr2 (533-599)||(15154468-15154532)
chr2 (482-600)||(39067041-39067156)
chr2 (533-599)||(42078906-42078971)
chr2 (533-599)||(3851770-3851838)
chr2 (484-599)||(4736713-4736824)
chr2 (482-526)||(3904919-3904963)
chr2 (477-525)||(14004018-14004066)
[»] chr8 (78 HSPs)
chr8 (481-603)||(29725487-29725608)
chr8 (489-603)||(38362421-38362534)
chr8 (482-603)||(35019235-35019355)
chr8 (481-600)||(31642981-31643098)
chr8 (481-599)||(23625646-23625766)
chr8 (490-591)||(4622854-4622955)
chr8 (494-603)||(19143154-19143262)
chr8 (481-597)||(39070261-39070377)
chr8 (494-603)||(41671434-41671542)
chr8 (490-591)||(276585-276686)
chr8 (490-591)||(639163-639264)
chr8 (490-591)||(824969-825070)
chr8 (486-591)||(15825071-15825175)
chr8 (494-603)||(26951243-26951350)
chr8 (495-591)||(25583716-25583812)
chr8 (501-595)||(15825876-15825969)
chr8 (490-591)||(27911889-27911990)
chr8 (490-591)||(27958308-27958409)
chr8 (480-599)||(3703166-3703283)
chr8 (491-591)||(17948608-17948708)
chr8 (503-591)||(38060876-38060964)
chr8 (483-603)||(38364705-38364819)
chr8 (489-591)||(17853386-17853488)
chr8 (490-591)||(15883527-15883628)
chr8 (494-600)||(23627472-23627577)
chr8 (482-599)||(39859902-39860016)
chr8 (503-603)||(43129357-43129458)
chr8 (490-591)||(2082384-2082485)
chr8 (490-591)||(6093190-6093290)
chr8 (482-599)||(40618448-40618564)
chr8 (495-591)||(23347249-23347345)
chr8 (480-599)||(26965362-26965479)
chr8 (495-591)||(44255966-44256062)
chr8 (482-599)||(17946583-17946698)
chr8 (489-599)||(39068838-39068945)
chr8 (484-602)||(45407245-45407360)
chr8 (482-599)||(278686-278801)
chr8 (482-599)||(637051-637166)
chr8 (482-599)||(822854-822969)
chr8 (501-595)||(17779420-17779513)
chr8 (482-599)||(18957359-18957474)
chr8 (490-591)||(3846507-3846607)
chr8 (484-599)||(15881233-15881346)
chr8 (480-599)||(16097567-16097684)
chr8 (495-591)||(18955106-18955202)
chr8 (484-599)||(30475974-30476087)
chr8 (499-591)||(39857874-39857966)
chr8 (480-599)||(41182398-41182515)
chr8 (484-599)||(38099217-38099331)
chr8 (482-599)||(23345171-23345286)
chr8 (484-600)||(38576588-38576701)
chr8 (482-599)||(42647259-42647373)
chr8 (482-599)||(2081366-2081481)
chr8 (552-602)||(29726579-29726629)
chr8 (533-591)||(40304512-40304570)
chr8 (484-596)||(4621484-4621594)
chr8 (506-599)||(18089468-18089560)
chr8 (490-591)||(41544844-41544944)
chr8 (480-596)||(30112137-30112251)
chr8 (495-591)||(45409254-45409349)
chr8 (533-591)||(16095817-16095875)
chr8 (533-591)||(30556790-30556848)
chr8 (482-599)||(38059243-38059358)
chr8 (481-559)||(40302413-40302490)
chr8 (533-591)||(42734691-42734749)
chr8 (562-603)||(31640186-31640227)
chr8 (535-599)||(5586797-5586861)
chr8 (484-599)||(6096786-6096898)
chr8 (482-558)||(17852389-17852465)
chr8 (533-589)||(43695282-43695338)
chr8 (533-591)||(3705235-3705293)
chr8 (483-561)||(5588101-5588179)
chr8 (561-603)||(26920526-26920568)
chr8 (533-589)||(13141410-13141466)
chr8 (490-589)||(38577159-38577256)
chr8 (533-591)||(38097929-38097987)
chr8 (567-599)||(5588023-5588055)
chr8 (567-599)||(28085928-28085960)
[»] chr6 (33 HSPs)
chr6 (480-603)||(24158985-24159107)
chr6 (482-599)||(12782975-12783092)
chr6 (484-599)||(5090320-5090434)
chr6 (482-599)||(13866014-13866128)
chr6 (483-603)||(34574826-34574942)
chr6 (490-591)||(11837750-11837851)
chr6 (490-591)||(23580086-23580187)
chr6 (490-591)||(14103792-14103893)
chr6 (495-591)||(27782272-27782368)
chr6 (482-599)||(14105893-14106008)
chr6 (521-603)||(32562640-32562722)
chr6 (494-603)||(5088595-5088701)
chr6 (490-591)||(17550980-17551081)
chr6 (489-587)||(4589978-4590076)
chr6 (482-599)||(16922203-16922318)
chr6 (481-599)||(4587860-4587976)
chr6 (489-599)||(8634486-8634595)
chr6 (482-599)||(17557572-17557687)
chr6 (490-599)||(24082999-24083107)
chr6 (494-591)||(28578430-28578526)
chr6 (484-599)||(953654-953767)
chr6 (495-591)||(27438218-27438313)
chr6 (500-599)||(15287474-15287572)
chr6 (533-591)||(955748-955806)
chr6 (482-599)||(23582168-23582283)
chr6 (482-599)||(27784380-27784495)
chr6 (483-599)||(5686338-5686451)
chr6 (490-591)||(11154786-11154887)
chr6 (503-591)||(25109367-25109456)
chr6 (536-597)||(21861359-21861420)
chr6 (543-599)||(16918299-16918355)
chr6 (534-584)||(24178554-24178604)
chr6 (485-559)||(28580952-28581025)
[»] scaffold0009 (1 HSPs)
scaffold0009 (494-603)||(94636-94744)
[»] scaffold0014 (2 HSPs)
scaffold0014 (484-599)||(71786-71900)
scaffold0014 (561-599)||(69524-69562)
[»] scaffold0208 (2 HSPs)
scaffold0208 (481-599)||(3859-3974)
scaffold0208 (533-591)||(5845-5903)
[»] scaffold0115 (2 HSPs)
scaffold0115 (490-591)||(20724-20825)
scaffold0115 (484-599)||(30642-30755)
[»] scaffold0779 (1 HSPs)
scaffold0779 (482-599)||(102-217)
[»] scaffold0006 (1 HSPs)
scaffold0006 (482-599)||(56446-56561)
[»] scaffold0217 (1 HSPs)
scaffold0217 (547-603)||(1490-1546)
[»] scaffold0003 (1 HSPs)
scaffold0003 (495-591)||(49049-49144)
[»] scaffold0259 (1 HSPs)
scaffold0259 (533-599)||(6108-6174)


Alignment Details
Target: chr4 (Bit Score: 324; Significance: 0; HSPs: 83)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 256 - 603
Target Start/End: Complemental strand, 43940682 - 43940335
Alignment:
Q  256 ccacatacttaaccattatttcannnnnnnnaaatctttaacaagtgtgttacttcttaacatgagctattagaataacccaaaatagactcgtgttatg 355  Q
    |||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43940682 ccacatacttaaccattatttcattttttttaaatctttaacaagtgtgttacttcttaacatgagctattagaataacccaaaatagactcgtgttatg 43940583  T
Q  356 taaagagttattgccgacaacacgtctgcacttgtgattattgcctgatcaatttgcccattatgatgggatcatgcgagaaacaaaataatgtaagaaa 455  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43940582 taaagagttattgccgacaacacgtctgcacttgtgattattgcctgatcaatttgcccattatgatgggatcatgcgagaaacaaaataatgtaagaaa 43940483  T
Q  456 taaaacatcgtcctaatccttatgtaggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaa 555  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43940482 taaaacatcgtcctaatccttatgtaggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaa 43940383  T
Q  556 tatataaatgtaacattaaatgtcaaataaatgagtcaatttttctat 603  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43940382 tatataaatgtaacattaaatgtcaaataaatgagtcaatttttctat 43940335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 9 - 165
Target Start/End: Complemental strand, 43940929 - 43940773
Alignment:
Q  9 tgatgtggttggccaagtagcaatttccttcttagattatggagaagctgggacaaattatcaacgacatcaataacttgtttgtccatcacgtatatat 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43940929 tgatgtggttggccaagtagcaatttccttcttagattatggagaagctgggacaaattatcaacgacatcaataacttgtttgtccatcacgtatatat 43940830  T
Q  109 tataacannnnnnnngagagaacgtatatattataacatgaaaggttaacatgtgtc 165  Q
    |||||||        ||||||||||||||||||||||||||||||||||||||||||    
T  43940829 tataacattttttttgagagaacgtatatattataacatgaaaggttaacatgtgtc 43940773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 482 - 603
Target Start/End: Original strand, 19869707 - 19869827
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    |||||||||||||||| ||||||||||||| |||||| ||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  19869707 ggttttttctacattatcctctcttgtttatagggta-tttaccctttcaagatatcaaccaatcaaaatgtaatatataaatgtaacattaaatgtcaa 19869805  T
Q  582 ataaatgagtcaatttttctat 603  Q
    ||||||||||||||||||||||    
T  19869806 ataaatgagtcaatttttctat 19869827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 7113930 - 7113814
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  7113930 ggttttttctgcattaccctctcttgtttagagggta-tttaccccttcaagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaatgtcaa 7113832  T
Q  582 ataaatgagtcaattttt 599  Q
    |||||| |||||||||||    
T  7113831 ataaattagtcaattttt 7113814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 485 - 603
Target Start/End: Complemental strand, 24577986 - 24577869
Alignment:
Q  485 tttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaata 584  Q
    ||||||||||||||||||||||||||| |||||| ||||||| || |||||||||| ||||||||| |||||||| ||||||||||||||||||||||||    
T  24577986 tttttctacattaccctctcttgtttatagggta-tttaccctttcaagatatcaaccaatcaaaaggtaatatacaaatgtaacattaaatgtcaaata 24577888  T
Q  585 aatgagtcaatttttctat 603  Q
    |||||||||||||||||||    
T  24577887 aatgagtcaatttttctat 24577869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 26923889 - 26923773
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    |||||||||||||||||||||||||||||||||| || |||||| ||| |||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  26923889 ggttttttctacattaccctctcttgtttagaggata-tttaccacttcaagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaatgtcaa 26923791  T
Q  582 ataaatgagtcaattttt 599  Q
    |||||| |||||||||||    
T  26923790 ataaattagtcaattttt 26923773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 494 - 603
Target Start/End: Complemental strand, 38623676 - 38623568
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtca 593  Q
    ||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  38623676 attaccctctcttgtttagagggta-tttaccctttcaagatatcaatcaatcaaaatgtaatatacaaatgtaacattaaatgtcaaataaataagtca 38623578  T
Q  594 atttttctat 603  Q
    ||||||||||    
T  38623577 atttttctat 38623568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 480 - 599
Target Start/End: Original strand, 47649397 - 47649516
Alignment:
Q  480 taggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatata-taaatgtaacattaaatgt 578  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||  ||||||||||||||||||    
T  47649397 taggttttttctacattaccctatcttgtttagagggt-atttaccccttcaagatatcaaccaatcaaaatgtaatatacaaaatgtaacattaaatgt 47649495  T
Q  579 caaataaatgagtcaattttt 599  Q
    |||||||| ||||||||||||    
T  47649496 caaataaacgagtcaattttt 47649516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 481 - 603
Target Start/End: Complemental strand, 10659235 - 10659115
Alignment:
Q  481 aggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtca 580  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||| || |||||||||| |||||||||||||||| | |||||||||||||||| |||    
T  10659235 aggttttttctacattaccctctcttgtttagagagta-tttaccc-ttcaagatatcaaccaatcaaaatgtaatacacaaatgtaacattaaatatca 10659138  T
Q  581 aataaatgagtcaatttttctat 603  Q
    |||||||||||||||||||||||    
T  10659137 aataaatgagtcaatttttctat 10659115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 481 - 603
Target Start/End: Complemental strand, 10873380 - 10873260
Alignment:
Q  481 aggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtca 580  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||| || |||||||||| |||||||||||||||| | |||||||||||||||| |||    
T  10873380 aggttttttctacattaccctctcttgtttagagagta-tttaccc-ttcaagatatcaaccaatcaaaatgtaatacacaaatgtaacattaaatatca 10873283  T
Q  581 aataaatgagtcaatttttctat 603  Q
    |||||||||||||||||||||||    
T  10873282 aataaatgagtcaatttttctat 10873260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 486 - 603
Target Start/End: Complemental strand, 31624747 - 31624631
Alignment:
Q  486 ttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataa 585  Q
    |||||||| |||||||||||| ||||||||||| ||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||| |||||    
T  31624747 ttttctactttaccctctcttatttagagggta-tttacccttttaagatattaaccaatcaaaatgtaatatataaatgtaacattaaatgtccaataa 31624649  T
Q  586 atgagtcaatttttctat 603  Q
    || |||||||||||||||    
T  31624648 attagtcaatttttctat 31624631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 496 - 603
Target Start/End: Original strand, 7111062 - 7111168
Alignment:
Q  496 taccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaat 595  Q
    ||||||||||||||||||||||| ||||||| || ||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  7111062 taccctctcttgtttagagggta-tttaccctttcaagatatcaactaatcaaaatgtaatatacaaatgtaacattaaatgtcaaataaatgagtcaat 7111160  T
Q  596 ttttctat 603  Q
    ||||||||    
T  7111161 ttttctat 7111168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 489 - 603
Target Start/End: Original strand, 26917639 - 26917752
Alignment:
Q  489 tctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatg 588  Q
    |||| |||||||||||||||||| ||||  |||||||| || |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  26917639 tctagattaccctctcttgttta-agggatatttaccctttcaagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaatgtcaaataaatg 26917737  T
Q  589 agtcaatttttctat 603  Q
    |||||||||||||||    
T  26917738 agtcaatttttctat 26917752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 494 - 603
Target Start/End: Complemental strand, 19871297 - 19871190
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtca 593  Q
    ||||||||||||||||||||||||| ||||||| || || ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19871297 attaccctctcttgtttagagggta-tttaccctttcaa-atatcaaccaatcaaaatgtaatatacaaatgtaacattaaatgtcaaataaatgagtca 19871200  T
Q  594 atttttctat 603  Q
    ||||||||||    
T  19871199 atttttctat 19871190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 494 - 603
Target Start/End: Complemental strand, 43594857 - 43594749
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtca 593  Q
    |||| |||||||||||||| ||||| ||||||  |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  43594857 attatcctctcttgtttagggggta-tttacctttttaagatatcaatcaatcaaaatataatatacaaatgtaacattaaatgtcaaataaatgagtca 43594759  T
Q  594 atttttctat 603  Q
    ||||||||||    
T  43594758 atttttctat 43594749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 499 - 603
Target Start/End: Original strand, 8840236 - 8840339
Alignment:
Q  499 cctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaatttt 598  Q
    |||||||||||||  ||||| ||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  8840236 cctctcttgtttaaggggta-tttaccctttcaagatatcaatcaatcaaaatgtaatatacaaatgtaacattaaatgtcaaataaatgagtcaatttt 8840334  T
Q  599 tctat 603  Q
    |||||    
T  8840335 tctat 8840339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 14270173 - 14270058
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    |||||||||||| |||||||||||||||||| ||||| ||||||| || |||||||||| |||||||||||||||||| ||||||||||||||||| |||    
T  14270173 ggttttttctacgttaccctctcttgtttagggggta-tttaccc-ttcaagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaatgacaa 14270076  T
Q  582 ataaatgagtcaattttt 599  Q
    |||||||| |||||||||    
T  14270075 ataaatgaatcaattttt 14270058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 490 - 591
Target Start/End: Complemental strand, 41041665 - 41041564
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||||||||||||||||||||||||||||||||||||  | | |||||||| |||||||||||||||||| | |||||||||||||||||||||||||||    
T  41041665 ctacattaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacatatgtaacattaaatgtcaaataaatga 41041566  T
Q  590 gt 591  Q
    ||    
T  41041565 gt 41041564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 489 - 603
Target Start/End: Complemental strand, 8081269 - 8081156
Alignment:
Q  489 tctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatg 588  Q
    |||| ||||||||||||||||||| ||||| ||||||  || |||||||||| |||| ||||||||||||| |||| |||||||||||||||||||||||    
T  8081269 tctagattaccctctcttgtttagggggta-tttaccatttcaagatatcaaccaattaaaatgtaatatacaaatataacattaaatgtcaaataaatg 8081171  T
Q  589 agtcaatttttctat 603  Q
    |||||||||||||||    
T  8081170 agtcaatttttctat 8081156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 489 - 603
Target Start/End: Complemental strand, 51943754 - 51943641
Alignment:
Q  489 tctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatg 588  Q
    |||| ||||| ||||||||||||   |||| ||||||| |||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||    
T  51943754 tctagattactctctcttgtttacgaggta-tttacccttttaagatattaaccaatcaaaatgtaatatacaaatgtaacattaaatgtcaaataaatg 51943656  T
Q  589 agtcaatttttctat 603  Q
    |||||||||||||||    
T  51943655 agtcaatttttctat 51943641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 490 - 591
Target Start/End: Original strand, 4652794 - 4652895
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||||||||||||||||||||||||||||||||||||  | | |||||||| |||||||||||||||||| | | |||||||||||||||||||||||||    
T  4652794 ctacattaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatga 4652893  T
Q  590 gt 591  Q
    ||    
T  4652894 gt 4652895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 484 - 585
Target Start/End: Original strand, 6504257 - 6504357
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    |||||||||| |||||||||||||||||| ||||| |||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  6504257 ttttttctacgttaccctctcttgtttagggggta-tttacctcttcaagatatcaaccaatcaaaatgtaatatataaatgtaacattaaatgttaaat 6504355  T
Q  584 aa 585  Q
    ||    
T  6504356 aa 6504357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 494 - 603
Target Start/End: Original strand, 49645787 - 49645895
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtca 593  Q
    ||||||| |||||||||| |||||| |||| || ||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  49645787 attacccactcttgtttaaagggta-tttatccttttaagatatcaaccaattaaaatgtaatatacaaatgtaacattaaatgtcaaataaatgagtca 49645885  T
Q  594 atttttctat 603  Q
    ||||| ||||    
T  49645886 attttcctat 49645895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 494 - 603
Target Start/End: Complemental strand, 50792763 - 50792655
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtca 593  Q
    |||||| ||||||||||| |||||| ||||||| || |||||||||| |||||||||||||||||| |||||||||||||||||| |||| |||||||||    
T  50792763 attaccttctcttgtttaaagggta-tttaccctttcaagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaatgttaaatgaatgagtca 50792665  T
Q  594 atttttctat 603  Q
    ||||||||||    
T  50792664 atttttctat 50792655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 491 - 591
Target Start/End: Complemental strand, 49970445 - 49970345
Alignment:
Q  491 tacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgag 590  Q
    ||||||||| ||||||||||||||||||||||||||  | | ||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||    
T  49970445 tacattaccttctcttgtttagagggtaatttaccctctcatgatatcaatcaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatgag 49970346  T
Q  591 t 591  Q
    |    
T  49970345 t 49970345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 490 - 591
Target Start/End: Complemental strand, 23419529 - 23419428
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| |||||||||||||||||||||||||||||||   | | |||||||| |||||||||||||||||| | |||||||||||||||||||||||||||    
T  23419529 ctacgttaccctctcttgtttagagggtaatttaccatctcatgatatcaaccaatcaaaatgtaatatacatatgtaacattaaatgtcaaataaatga 23419430  T
Q  590 gt 591  Q
    ||    
T  23419429 gt 23419428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 494 - 603
Target Start/End: Original strand, 30112170 - 30112278
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtca 593  Q
    |||||||||||||||||| |||||| ||||||| || || ||||||| ||||||||||| ||| || ||||||||||||||||||||||||||||||||     
T  30112170 attaccctctcttgtttatagggta-tttaccctttcaaaatatcaaccaatcaaaatgcaatttacaaatgtaacattaaatgtcaaataaatgagtcg 30112268  T
Q  594 atttttctat 603  Q
    ||||||||||    
T  30112269 atttttctat 30112278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 30114465 - 30114349
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| |||| | |||||| ||||   |||| |||||||||||||||||| || |||||||||| ||||||| |||||||||||||||||||||    
T  30114465 ggttttttctatattaacttctcttatttaagaggta-tttacccctttaagatattaaccaatcaaaatataatatacaaatgtaacattaaatgtcaa 30114367  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  30114366 ataaatgagtcaattttt 30114349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 483 - 603
Target Start/End: Original strand, 51940847 - 51940965
Alignment:
Q  483 gttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaa 582  Q
    ||||||| || ||||| || ||||||||||  ||  ||||| ||||| ||||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  51940847 gttttttttatattactctttcttgtttag--ggatatttatcccttcaagatatcaatcaatcaaaatgtgatatactaatgtaacattaaatgtcaaa 51940944  T
Q  583 taaatgagtcaatttttctat 603  Q
    |||||||||||||||||||||    
T  51940945 taaatgagtcaatttttctat 51940965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 494 - 602
Target Start/End: Original strand, 48952788 - 48952895
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtca 593  Q
    |||||| |||||||||||| ||||| ||||||| || |||||||||| |||||||||||||||||| ||||||| ||||||||||| |||||||||||||    
T  48952788 attaccttctcttgtttagggggta-tttaccctttcaagatatcaaccaatcaaaatgtaatatacaaatgtatcattaaatgtccaataaatgagtca 48952886  T
Q  594 atttttcta 602  Q
    | |||||||    
T  48952887 acttttcta 48952895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 534 - 603
Target Start/End: Original strand, 43937809 - 43937878
Alignment:
Q  534 atatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaatttttctat 603  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43937809 atatcaatcaatcaaaatgtactatataaatgtaacattaaatgttaaataaatgagtcaatttttctat 43937878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 489 - 591
Target Start/End: Original strand, 17360968 - 17361070
Alignment:
Q  489 tctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatg 588  Q
    ||||| |||||||||||||||||||||||||||||||   | | |||||||| |||| ||||||||||||||| | |||| |||||||||||||||||||    
T  17360968 tctacgttaccctctcttgtttagagggtaatttaccatctcatgatatcaaccaattaaaatgtaatatatataggtaatattaaatgtcaaataaatg 17361067  T
Q  589 agt 591  Q
    |||    
T  17361068 agt 17361070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 489 - 599
Target Start/End: Original strand, 31309420 - 31309528
Alignment:
Q  489 tctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatg 588  Q
    |||||||||||||||||||||||| |||||||| ||||  | | |||||||| ||||||||||||||| || | | ||||||||||||||||||||||||    
T  31309420 tctacattaccctctcttgtttagggggtaatt-accctctcatgatatcaaccaatcaaaatgtaat-tacataggtaacattaaatgtcaaataaatg 31309517  T
Q  589 agtcaattttt 599  Q
    |||||||||||    
T  31309518 agtcaattttt 31309528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 490 - 587
Target Start/End: Complemental strand, 20354297 - 20354201
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaat 587  Q
    |||| ||||||||||||||||||||||||||||||| ||  | |||||||| |||||||||||||||||| | | |||||||||||||||||||||||    
T  20354297 ctacgttaccctctcttgtttagagggtaatttacctctc-atgatatcaaccaatcaaaatgtaatatacataggtaacattaaatgtcaaataaat 20354201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 490 - 591
Target Start/End: Complemental strand, 20787263 - 20787163
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| ||||||||||||||||||||| ||||||||||  | | |||||||| |||||||||||||||||| | | |||||||||||||||||||||||||    
T  20787263 ctacgttaccctctcttgtttagagg-taatttaccctctcatgatatcaaccaatcaaaatgtaatatacataagtaacattaaatgtcaaataaatga 20787165  T
Q  590 gt 591  Q
    ||    
T  20787164 gt 20787163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 490 - 599
Target Start/End: Complemental strand, 31292823 - 31292715
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| ||||||||||||||||||||||||||| ||||  | | |||||||| |||||||||||||||||| | | ||||||||||||||||||||||| |    
T  31292823 ctacgttaccctctcttgtttagagggtaatt-accctctcatgatatcaaccaatcaaaatgtaatatacataggtaacattaaatgtcaaataaataa 31292725  T
Q  590 gtcaattttt 599  Q
    || |||||||    
T  31292724 gtaaattttt 31292715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 542 - 603
Target Start/End: Complemental strand, 40846811 - 40846750
Alignment:
Q  542 caatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaatttttctat 603  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  40846811 caatcaaaatgtaatatacaaatgtaacattaaatgtcaaataaatgagtcaatttttctat 40846750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 484 - 599
Target Start/End: Complemental strand, 8941301 - 8941188
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    ||||||||| ||||||||||||| ||||||||||| |||||||  | | |||||||| ||||||||||||||||||||   | |||||||||||||  ||    
T  8941301 ttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatatattggcaacattaaatgtc--at 8941204  T
Q  584 aaatgagtcaattttt 599  Q
    ||||||||||||||||    
T  8941203 aaatgagtcaattttt 8941188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 495 - 589
Target Start/End: Original strand, 7487074 - 7487168
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    ||||||||||||||||||||||||||||||||  | | |||||||| |||||||||||||||||| | | ||| |||||| ||||||||||||||    
T  7487074 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacataggtatcattaattgtcaaataaatga 7487168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 489 - 591
Target Start/End: Original strand, 34072860 - 34072961
Alignment:
Q  489 tctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatg 588  Q
    ||||| ||||||||||||||||||||||||||| ||||  | | |||||||| |||||||||||||||||| | | |||| |||||||||||||||||||    
T  34072860 tctacgttaccctctcttgtttagagggtaatt-accctctcatgatatcaaccaatcaaaatgtaatatacataggtaatattaaatgtcaaataaatg 34072958  T
Q  589 agt 591  Q
    |||    
T  34072959 agt 34072961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 494 - 591
Target Start/End: Complemental strand, 13534782 - 13534686
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    |||||||||||||||||||||||||||| || |  | | |||||||| |||||||||||||||||| | | |||||||||||||||||||||||||||    
T  13534782 attaccctctcttgtttagagggtaatt-actctctcatgatatcaaccaatcaaaatgtaatatacataagtaacattaaatgtcaaataaatgagt 13534686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 491 - 591
Target Start/End: Original strand, 52447208 - 52447307
Alignment:
Q  491 tacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgag 590  Q
    ||||||| |||||||| |||||||||||||||||||  | | |||||||||||||||||||| |||||||| | |||| ||| |||||||||||||||||    
T  52447208 tacattatcctctcttatttagagggtaatttaccctctcatgatatcaatcaatcaaaatgcaatatatataggtaatatt-aatgtcaaataaatgag 52447306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 494 - 585
Target Start/End: Complemental strand, 6506068 - 6505978
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataa 585  Q
    |||||| ||||||||||||||  || ||||||  ||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||    
T  6506068 attaccttctcttgtttagagaata-tttacctttttaagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaatatcaaataa 6505978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 43304920 - 43304806
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    |||||||| || |||||||||||||||||||||||| |||||||| || | |||||||| |||||||||||||||||| |     |||||||||||||      
T  43304920 ggttttttttagattaccctctcttgtttagagggt-atttaccctttcatgatatcaaccaatcaaaatgtaatatacatcgacaacattaaatgtc-- 43304824  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  43304823 ataaatgagtcaattttt 43304806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 490 - 591
Target Start/End: Original strand, 16664490 - 16664590
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| ||||||||||||||||||||| ||||| ||||  | | |||||||| ||||||||||| |||||| | | |||||||||||||||||||||||||    
T  16664490 ctacgttaccctctcttgtttagaggataatt-accctctcatgatatcaaccaatcaaaatgaaatatacataggtaacattaaatgtcaaataaatga 16664588  T
Q  590 gt 591  Q
    ||    
T  16664589 gt 16664590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 491 - 591
Target Start/End: Complemental strand, 30827723 - 30827632
Alignment:
Q  491 tacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgag 590  Q
    ||||||||||||||||||||||| |||||||||||         |||||| |||||||||||||||||| | | ||||||||||||||||||||||||||    
T  30827723 tacattaccctctcttgtttagatggtaatttacc---------tatcaaccaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatgag 30827633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 495 - 591
Target Start/End: Original strand, 35044897 - 35044992
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    |||||||| |||||||||||| ||||| | |  || |||||||||| |||||||||||||||||| | | |||||||||||||||||||||||||||    
T  35044897 ttaccctcacttgtttagaggataatt-atcatttcaagatatcaaccaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatgagt 35044992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 495 - 591
Target Start/End: Original strand, 35824336 - 35824431
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    |||||||||||||||||||| |||||| ||| ||  | ||||| || |||||||||||||||||| | | |||||||||||||||||||||||||||    
T  35824336 ttaccctctcttgtttagagagtaattaacctctc-atgatataaaccaatcaaaatgtaatatacataagtaacattaaatgtcaaataaatgagt 35824431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 491 - 599
Target Start/End: Original strand, 43590261 - 43590368
Alignment:
Q  491 tacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgag 590  Q
    ||||||| | |||||| ||||| ||||| |||| || || || |||||||  ||||||||||||||||| |||||||||| ||||||||||||||||| |    
T  43590261 tacattatcttctcttatttagcgggta-tttatcctttcaatatatcaaataatcaaaatgtaatatacaaatgtaacaataaatgtcaaataaatgtg 43590359  T
Q  591 tcaattttt 599  Q
    |||||||||    
T  43590360 tcaattttt 43590368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 484 - 599
Target Start/End: Original strand, 47805597 - 47805709
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    ||||||||| |||||||| ||||||||||||| || |||||||  | | |||||||| ||||||||||||||||||||   | |||||||||||||  ||    
T  47805597 ttttttctagattaccctatcttgtttagaggata-tttaccctctcatgatatcaaccaatcaaaatgtaatatatattggcaacattaaatgtc--at 47805693  T
Q  584 aaatgagtcaattttt 599  Q
    ||||||||||||||||    
T  47805694 aaatgagtcaattttt 47805709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 484 - 599
Target Start/End: Complemental strand, 49875792 - 49875679
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    |||||| || ||||||||||||||||||||||||| ||||||   | | |||||||| ||||||||||||||||||||   | |||||||||||||  |     
T  49875792 ttttttttagattaccctctcttgtttagagggtattttaccttctcatgatatcaaccaatcaaaatgtaatatatattggcaacattaaatgtc--ac 49875695  T
Q  584 aaatgagtcaattttt 599  Q
    ||||||||||||||||    
T  49875694 aaatgagtcaattttt 49875679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 481 - 599
Target Start/End: Original strand, 20352025 - 20352141
Alignment:
Q  481 aggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtca 580  Q
    |||||||||||| ||||||||||||| ||||||| ||| |||||||  | | |||||||| |||||||||||||||||| |   | ||||||||| |||     
T  20352025 aggttttttctagattaccctctcttatttagagagtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaaggtc- 20352123  T
Q  581 aataaatgagtcaattttt 599  Q
     ||||||||||||||||||    
T  20352124 -ataaatgagtcaattttt 20352141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 481 - 555
Target Start/End: Complemental strand, 7489335 - 7489261
Alignment:
Q  481 aggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaa 555  Q
    |||||||||||| ||||||||||||| ||||||||||| ||||||| || | |||||||| ||||||||||||||    
T  7489335 aggttttttctagattaccctctcttatttagagggtattttaccctttcatgatatcaaccaatcaaaatgtaa 7489261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 34075036 - 34074922
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| ||||| |||||||||||| || ||| |||||||||| | |||||||| |||||||||||||||||| |     |||||||||||||      
T  34075036 ggttttttctagattactctctcttgtttaaagtgta-tttaccccttcatgatatcaaccaatcaaaatgtaatatacattgacaacattaaatgtc-- 34074940  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  34074939 ataaatgagtcaattttt 34074922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 482 - 599
Target Start/End: Original strand, 41039572 - 41039687
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| ||||||||||||| |||||| |||| |||||||  | | |||||||| |||||||||||||||||| |   | |||||||||||||      
T  41039572 ggttttttctagattaccctctcttatttagaaggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtc-- 41039669  T
Q  582 ataaatgagtcaattttt 599  Q
    |||||||||||| |||||    
T  41039670 ataaatgagtcatttttt 41039687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 46719763 - 46719649
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    |||||||| || ||||||||||||| |||||||||| ||||||||  | | |||||||| |||||||||||||||||| |   | |||||||||||||      
T  46719763 ggttttttatagattaccctctcttatttagagggt-atttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtc-- 46719667  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  46719666 ataaatgagtcaattttt 46719649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 490 - 591
Target Start/End: Original strand, 54919234 - 54919336
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacc-cctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatg 588  Q
    |||| |||||||||||||||||||||||||||||||  | | | ||||||||  ||||||||||||| ||| | |  |||||||||||||||||||||||    
T  54919234 ctacgttaccctctcttgtttagagggtaatttacctgcctcatgatatcaactaatcaaaatgtaagatacatagataacattaaatgtcaaataaatg 54919333  T
Q  589 agt 591  Q
    |||    
T  54919334 agt 54919336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 490 - 599
Target Start/End: Complemental strand, 50496352 - 50496241
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaat--gtaacattaaatgtcaaat-aaa 586  Q
    |||| |||||||||||||||||| |||||| ||||||  | | |||||||| |||||||||||||||||| | ||  | ||||||||||||||||| |||    
T  50496352 ctacgttaccctctcttgtttagggggtaa-ttaccctctaatgatatcaaccaatcaaaatgtaatatacacataagcaacattaaatgtcaaataaaa 50496254  T
Q  587 tgagtcaattttt 599  Q
    |||||||||||||    
T  50496253 tgagtcaattttt 50496241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 484 - 599
Target Start/End: Original strand, 30823697 - 30823810
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    ||||||||| ||||||||||||| ||||||||||| |||||||  | | |||||||| |||||||||||| ||||| |     |||||||||||||  ||    
T  30823697 ttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgttatatacattgacaacattaaatgtc--at 30823794  T
Q  584 aaatgagtcaattttt 599  Q
    ||||||||||||||||    
T  30823795 aaatgagtcaattttt 30823810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 495 - 591
Target Start/End: Original strand, 49873561 - 49873656
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    |||||||||||| |||||| ||||||| || |  | | |||||||| |||||||||||||||||| | | |||||||||||||||||||||||||||    
T  49873561 ttaccctctcttttttagatggtaatt-actctctcatgatatcaaccaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatgagt 49873656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 481 - 599
Target Start/End: Original strand, 23417197 - 23417313
Alignment:
Q  481 aggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtca 580  Q
    |||||||| ||| ||||||||||||| ||||||||||| |||||||  | | |||||||| |||||||||||||||||| |     |||||||||||||     
T  23417197 aggtttttgctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattgacaacattaaatgtc- 23417295  T
Q  581 aataaatgagtcaattttt 599  Q
     |||||||| |||||||||    
T  23417296 -ataaatgattcaattttt 23417313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 481 - 599
Target Start/End: Complemental strand, 54921451 - 54921335
Alignment:
Q  481 aggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtca 580  Q
    |||||||||||| ||||||||||||| ||||||||||| |||||||  | |  ||||||| |||||||||||||||||| |     |||||||||||||     
T  54921451 aggttttttctagattaccctctcttatttagagggtattttaccctctcataatatcaaccaatcaaaatgtaatatacattgacaacattaaatgtc- 54921353  T
Q  581 aataaatgagtcaattttt 599  Q
     |||||||| |||||||||    
T  54921352 -ataaatgaatcaattttt 54921335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 542 - 599
Target Start/End: Complemental strand, 3035949 - 3035892
Alignment:
Q  542 caatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaattttt 599  Q
    |||||||||||||||||| | | ||||||||||||||||||||||||||| |||||||    
T  3035949 caatcaaaatgtaatatacataggtaacattaaatgtcaaataaatgagtaaattttt 3035892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 484 - 599
Target Start/End: Original strand, 13530035 - 13530147
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    ||||||||| |||||||| ||||||||||||||| ||||||||  | | ||||| || |||||||||||||||||| |     |||||||||||||  ||    
T  13530035 ttttttctagattaccctatcttgtttagagggt-atttaccctctcatgatataaaccaatcaaaatgtaatatacattgacaacattaaatgtc--at 13530131  T
Q  584 aaatgagtcaattttt 599  Q
    ||||||||||||||||    
T  13530132 aaatgagtcaattttt 13530147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 484 - 599
Target Start/End: Complemental strand, 16666732 - 16666620
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    ||||||| | ||||||||||||| |||||| |||| |||||||  | | |||||||| ||||||||||||||||||||   | |||||||||| ||  ||    
T  16666732 ttttttcaagattaccctctcttatttagaaggta-tttaccctctcatgatatcaaccaatcaaaatgtaatatatattagcaacattaaatatc--at 16666636  T
Q  584 aaatgagtcaattttt 599  Q
    ||||||||||||||||    
T  16666635 aaatgagtcaattttt 16666620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 489 - 561
Target Start/End: Complemental strand, 17520153 - 17520082
Alignment:
Q  489 tctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatata 561  Q
    ||||| |||||||||||||||||||||||||||  || ||  | |||||||||||||||||||||||||||||    
T  17520153 tctacgttaccctctcttgtttagagggtaattatcctctc-atgatatcaatcaatcaaaatgtaatatata 17520082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 486 - 600
Target Start/End: Original strand, 23931593 - 23931704
Alignment:
Q  486 ttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataa 585  Q
    ||||||| |||||||||||||||||||||||| |||||| |  ||| ||||||||  ||||||||||||||||| |     |||||||||| ||  ||||    
T  23931593 ttttctagattaccctctcttgtttagagggt-atttactctcttatgatatcaacaaatcaaaatgtaatatacattgacaacattaaatatc--ataa 23931689  T
Q  586 atgagtcaatttttc 600  Q
    |||||||||||||||    
T  23931690 atgagtcaatttttc 23931704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 533 - 599
Target Start/End: Original strand, 8939279 - 8939345
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaattttt 599  Q
    ||||||||  ||||||||||||||||| | | ||||||||||||||||||||||||| | |||||||    
T  8939279 gatatcaactaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatgaataaattttt 8939345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 494 - 599
Target Start/End: Original strand, 27956538 - 27956640
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtca 593  Q
    ||||||||||||||| ||||| ||| |||||||  | | ||||||||||||||||||||||||||| |     |||||||||||||  ||||||||||||    
T  27956538 attaccctctcttgtctagagtgta-tttaccctctcatgatatcaatcaatcaaaatgtaatatacattgacaacattaaatgtc--ataaatgagtca 27956634  T
Q  594 attttt 599  Q
    ||||||    
T  27956635 attttt 27956640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 561 - 603
Target Start/End: Original strand, 50790651 - 50790693
Alignment:
Q  561 aaatgtaacattaaatgtcaaataaatgagtcaatttttctat 603  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  50790651 aaatgtaacattaaatgtcaaataaatgagtcaaattttctat 50790693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 495 - 591
Target Start/End: Original strand, 46717546 - 46717641
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||||||||||||||||||| ||||||| |   | | ||||||||  ||||||||| ||||||| | | |||||||||||||| ||||||||||||    
T  46717546 ttaccctctcttgtttagagg-taatttatcttctcatgatatcaactaatcaaaatataatatacataggtaacattaaatgttaaataaatgagt 46717641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 484 - 599
Target Start/End: Complemental strand, 13861996 - 13861882
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    |||||| || ||||| |||||||||||||  |||| |||||  | | | |||||||| |||||||||||||||||| |     |||||||||| ||||||    
T  13861996 ttttttttagattacactctcttgtttaggaggta-tttacttcctcatgatatcaaccaatcaaaatgtaatatacattgacaacattaaatatcaaat 13861898  T
Q  584 aaatgagtcaattttt 599  Q
    ||||||||||||||||    
T  13861897 aaatgagtcaattttt 13861882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 484 - 559
Target Start/End: Original strand, 17518858 - 17518932
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatata 559  Q
    ||||||||| |||||||||||||||||||| ||| ||||||||  | | |||| || |||||||||||||||||||    
T  17518858 ttttttctagattaccctctcttgtttagacggt-atttaccctctcatgataccagtcaatcaaaatgtaatata 17518932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 533 - 591
Target Start/End: Complemental strand, 27962619 - 27962561
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||| ||| ||||||||||||||||| | |  ||||||||||||||||||||||||||    
T  27962619 gatataaataaatcaaaatgtaatatacataattaacattaaatgtcaaataaatgagt 27962561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 533 - 599
Target Start/End: Complemental strand, 49649402 - 49649337
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaattttt 599  Q
    ||||||||||||| ||||||||| ||| |   | |||||||||||||||||||||||||||||||||    
T  49649402 gatatcaatcaataaaaatgtaa-atacattagcaacattaaatgtcaaataaatgagtcaattttt 49649337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 482 - 580
Target Start/End: Complemental strand, 52449410 - 52449312
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtca 580  Q
    ||||||||||| |||||||||| || |||||| | || |||||||  | | |||||||| |||||||||||||||||| |   | ||||||||||||||    
T  52449410 ggttttttctagattaccctctgttatttagaagatattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtca 52449312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 542 - 599
Target Start/End: Original strand, 50494809 - 50494865
Alignment:
Q  542 caatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaattttt 599  Q
    |||||||||||||||||| |   ||||||||||||||| |||||||||||||||||||    
T  50494809 caatcaaaatgtaatatacattggtaacattaaatgtc-aataaatgagtcaattttt 50494865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 495 - 587
Target Start/End: Complemental strand, 23933772 - 23933681
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaat 587  Q
    ||||||| ||||||||||||||||||| |||   | | |||||||| |||| ||||||||||||| | |  |||||| |||||||||||||||    
T  23933772 ttaccctatcttgtttagagggtaatt-accatctcatgatatcaaccaattaaaatgtaatatacatagataacatcaaatgtcaaataaat 23933681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 484 - 551
Target Start/End: Complemental strand, 4655040 - 4654973
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaat 551  Q
    ||||||||| |||||||| |||||||||||||||| |||||||  | | |||||||| |||| |||||    
T  4655040 ttttttctagattaccctatcttgtttagagggtattttaccctctcatgatatcaaccaattaaaat 4654973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 481 - 523
Target Start/End: Complemental strand, 7489417 - 7489375
Alignment:
Q  481 aggttttttctacattaccctctcttgtttagagggtaattta 523  Q
    |||||||||||| ||||||||||||| ||||||||||| ||||    
T  7489417 aggttttttctagattaccctctcttatttagagggtatttta 7489375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 559
Target Start/End: Complemental strand, 17363098 - 17363033
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatata 559  Q
    |||||||||| || |||| ||| || |||||||  | | |||||||||||||||||||||||||||    
T  17363098 attaccctcttttatttaaaggatattttaccctctcatgatatcaatcaatcaaaatgtaatata 17363033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 599
Target Start/End: Complemental strand, 35046272 - 35046176
Alignment:
Q  499 cctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaatttt 598  Q
    |||||||||||||||||||| |||| ||||  | |||||||| |||||||||||||||||| |     || ||||||||||  |||||||||||||||||    
T  35046272 cctctcttgtttagagggta-tttatccctc-atgatatcaaccaatcaaaatgtaatatacattgacaatattaaatgtc--ataaatgagtcaatttt 35046177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 508 - 560
Target Start/End: Complemental strand, 42180264 - 42180213
Alignment:
Q  508 tttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatat 560  Q
    ||||||||||| |||| ||||| | |||||||| |||||||||||||||||||    
T  42180264 tttagagggta-tttatcccttcatgatatcaaccaatcaaaatgtaatatat 42180213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 3e-47; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 483 - 603
Target Start/End: Original strand, 44299066 - 44299185
Alignment:
Q  483 gttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaa 582  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||| |||||||||||||||||| ||||||||||||||||||||||    
T  44299066 gttttttctacattaccctctcttgtttagagggta-tttaccccttcaagataccaaccaatcaaaatgtaatatacaaatgtaacattaaatgtcaaa 44299164  T
Q  583 taaatgagtcaatttttctat 603  Q
    |||||||||||||||||||||    
T  44299165 taaatgagtcaatttttctat 44299185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 481 - 603
Target Start/End: Complemental strand, 43847808 - 43847688
Alignment:
Q  481 aggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtca 580  Q
    |||||||||||||||||||||||||||||||| ||||| |||||| ||| |||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  43847808 aggttttttctacattaccctctcttgtttag-gggta-tttacctcttcaagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaatgtca 43847711  T
Q  581 aataaatgagtcaatttttctat 603  Q
    |||||||||||||||||||||||    
T  43847710 aataaatgagtcaatttttctat 43847688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 481 - 598
Target Start/End: Original strand, 4638150 - 4638264
Alignment:
Q  481 aggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtca 580  Q
    ||||||||||||||||||  ||||||||||| |||||| ||||||| || |||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  4638150 aggttttttctacattac--tctcttgtttatagggta-tttaccctttaaagatatcaaacaatcaaaatgtaatatacaaatgtaacattaaatgtca 4638246  T
Q  581 aataaatgagtcaatttt 598  Q
    ||||||||||||||||||    
T  4638247 aataaatgagtcaatttt 4638264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 481 - 603
Target Start/End: Complemental strand, 11757222 - 11757101
Alignment:
Q  481 aggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtca 580  Q
    |||||||||||||||||| || |||| |||||| |||| ||||| |||| |||||||||| |||||||||||||||||| ||||| |||||||||| |||    
T  11757222 aggttttttctacattacactttcttatttagaaggta-tttacaccttcaagatatcaaccaatcaaaatgtaatatacaaatgcaacattaaatctca 11757124  T
Q  581 aataaatgagtcaatttttctat 603  Q
    |||||||||||||||||||||||    
T  11757123 aataaatgagtcaatttttctat 11757101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 494 - 600
Target Start/End: Complemental strand, 23264197 - 23264092
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtca 593  Q
    |||||||| |||||||||| ||||| ||||||| || |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  23264197 attaccctatcttgtttagggggta-tttaccctttcaagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaatgtcaaataaatgagtca 23264099  T
Q  594 atttttc 600  Q
    |||||||    
T  23264098 atttttc 23264092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 500 - 603
Target Start/End: Complemental strand, 4640432 - 4640330
Alignment:
Q  500 ctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaattttt 599  Q
    |||||||||||||||| || ||||||| || |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  4640432 ctctcttgtttagaggata-tttaccctttcaagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaatgtcaaataaatgaatcaattttt 4640334  T
Q  600 ctat 603  Q
    ||||    
T  4640333 ctat 4640330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 482 - 603
Target Start/End: Complemental strand, 44110282 - 44110163
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    |||||||||||||||||||| | || |||||||| || |||| ||||| |||| ||||| |||||||||| |||||||||||||||||||||| ||||||    
T  44110282 ggttttttctacattaccctattttatttagaggata-tttatcccttcaagacatcaaccaatcaaaatataatatataaatgtaacattaagtgtcaa 44110184  T
Q  582 ataaatgagtcaatttttctat 603  Q
    ||||||||||| ||||||||||    
T  44110183 ataaatgagtc-atttttctat 44110163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 499 - 599
Target Start/End: Original strand, 31029909 - 31030009
Alignment:
Q  499 cctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaatttt 598  Q
    ||||||||||||||||||||||||||||  | | |||||||||||||||||||||||||||   | ||||||||||||||||||||||||||| ||||||    
T  31029909 cctctcttgtttagagggtaatttaccctctcatgatatcaatcaatcaaaatgtaatatacgtaggtaacattaaatgtcaaataaatgagtaaatttt 31030008  T
Q  599 t 599  Q
    |    
T  31030009 t 31030009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 490 - 591
Target Start/End: Original strand, 10772549 - 10772650
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| ||| ||||||||||||||||||||||||||||  | | |||||||| |||||||||||||||||| | | |||||||||||||||||||||||||    
T  10772549 ctacgttatcctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatga 10772648  T
Q  590 gt 591  Q
    ||    
T  10772649 gt 10772650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 490 - 591
Target Start/End: Complemental strand, 30838912 - 30838811
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| |||||||||||| |||||||||||||||||||  ||| |||||||| ||||||||||||| |||| | | |||||||||||||||||||||||||    
T  30838912 ctacgttaccctctcttatttagagggtaatttaccctcttatgatatcaaccaatcaaaatgtactatacataggtaacattaaatgtcaaataaatga 30838813  T
Q  590 gt 591  Q
    ||    
T  30838812 gt 30838811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 490 - 591
Target Start/End: Original strand, 33704411 - 33704512
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| ||||||||||||||||||||||||||||||||  | | | |||||| |||||||||||||||||| | | |||||||||||||||||||||||||    
T  33704411 ctacgttaccctctcttgtttagagggtaatttaccctctcatgttatcaaccaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatga 33704510  T
Q  590 gt 591  Q
    ||    
T  33704511 gt 33704512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 494 - 603
Target Start/End: Original strand, 43846216 - 43846324
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtca 593  Q
    |||||||| |||| ||||  ||||| |||| || || ||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  43846216 attaccctatcttatttaaggggta-tttatcctttcaagatatcaactaatcaaaatgtaatatacaaatgtaacattaaatgtcaaataaatgagtca 43846314  T
Q  594 atttttctat 603  Q
    ||||||||||    
T  43846315 atttttctat 43846324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 483 - 599
Target Start/End: Complemental strand, 5328922 - 5328807
Alignment:
Q  483 gttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaa 582  Q
    ||||||| || ||||||||||||||||||| ||| | |||||||||| | ||||||||||||||||||||||||||| |     ||||||||||||||||    
T  5328922 gttttttttagattaccctctcttgtttagggggca-tttaccccttcatgatatcaatcaatcaaaatgtaatatacattgacaacattaaatgtcaaa 5328824  T
Q  583 taaatgagtcaattttt 599  Q
    |||||||||||||||||    
T  5328823 taaatgagtcaattttt 5328807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 495 - 599
Target Start/End: Original strand, 7556108 - 7556211
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaa 594  Q
    ||||||||||||||||||||||||||| ||||  | | ||||||||||||||||||||||||||| | | |||||||||||| ||||||||||||||| |    
T  7556108 ttaccctctcttgtttagagggtaatt-accctctcatgatatcaatcaatcaaaatgtaatatacataggtaacattaaatatcaaataaatgagtcga 7556206  T
Q  595 ttttt 599  Q
    |||||    
T  7556207 ttttt 7556211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 499 - 591
Target Start/End: Original strand, 48127593 - 48127685
Alignment:
Q  499 cctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||||||||||||||| ||||||||||  ||| |||||||| |||||||||||||||||| | | |||||||||||||||||||||||||||    
T  48127593 cctctcttgtttagaggataatttaccctcttatgatatcaaccaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatgagt 48127685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 489 - 591
Target Start/End: Original strand, 25655672 - 25655773
Alignment:
Q  489 tctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatg 588  Q
    ||||| ||||||| ||||||||||||||||||| |||| || | ||||||||||||||||||||||||||| | | |||| |||||||||||||||||||    
T  25655672 tctacgttaccctttcttgtttagagggtaatt-accctttcatgatatcaatcaatcaaaatgtaatatacataggtaatattaaatgtcaaataaatg 25655770  T
Q  589 agt 591  Q
    |||    
T  25655771 agt 25655773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 534 - 603
Target Start/End: Complemental strand, 44300244 - 44300175
Alignment:
Q  534 atatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaatttttctat 603  Q
    ||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  44300244 atatcaaccaatcaaaatataatatacaaatgtaacattaaatgtcaaataaatgagtcaatttttctat 44300175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 490 - 591
Target Start/End: Complemental strand, 44512593 - 44512492
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    ||||||||| |||||||||||||||| |||||||| |  | | |||||||| |||||||||||||||||| | | |||||||||||||||||||||||||    
T  44512593 ctacattactctctcttgtttagaggttaatttactctctcatgatatcaaccaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatga 44512494  T
Q  590 gt 591  Q
    ||    
T  44512493 gt 44512492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 495 - 591
Target Start/End: Complemental strand, 29522113 - 29522018
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||||||||||||||||||||||||| ||||  | | |||||||| |||||||||||||||||| | | |||||||||||||||||||||||||||    
T  29522113 ttaccctctcttgtttagagggtaatt-accctgtcatgatatcaaccaatcaaaatgtaatatacataagtaacattaaatgtcaaataaatgagt 29522018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 490 - 591
Target Start/End: Original strand, 7152724 - 7152824
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||||||||||||||||||||||||| ||||||||||  ||| ||||||||  ||| ||||||||||||| | | |||||||||| ||||||||||||||    
T  7152724 ctacattaccctctcttgtttagagg-taatttaccctcttatgatatcaactaattaaaatgtaatatacataggtaacattaagtgtcaaataaatga 7152822  T
Q  590 gt 591  Q
    ||    
T  7152823 gt 7152824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 495 - 587
Target Start/End: Original strand, 36307665 - 36307758
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaat-gtaacattaaatgtcaaataaat 587  Q
    ||||||||||||||||||||||||||||| ||  | | |||||||| |||||||||||||||||| | || |||||||||||||||||||||||    
T  36307665 ttaccctctcttgtttagagggtaatttatcctctcatgatatcaaccaatcaaaatgtaatatacatatagtaacattaaatgtcaaataaat 36307758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 482 - 599
Target Start/End: Original strand, 42159356 - 42159477
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggta---atttacccc--tttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaat 576  Q
    |||||||||||||||||||||| ||||| | ||||||   ||||||||   || ||||||||||  ||||||||||||||||| |||||||| |||||||    
T  42159356 ggttttttctacattaccctct-ttgttgatagggtattaatttaccctcattcaagatatcaacgaatcaaaatgtaatatacaaatgtaatattaaat 42159454  T
Q  577 gtcaaataaatgagtcaattttt 599  Q
    ||||||||||||||||| |||||    
T  42159455 gtcaaataaatgagtcatttttt 42159477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 495 - 587
Target Start/End: Original strand, 24780881 - 24780973
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaat 587  Q
    ||||||| |||||||||||||||||||||||   | | |||||||||||||| |||||||||||| | | |||||||||||||||||||||||    
T  24780881 ttaccctatcttgtttagagggtaatttaccgtctcatgatatcaatcaatcgaaatgtaatatacataggtaacattaaatgtcaaataaat 24780973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 495 - 591
Target Start/End: Original strand, 35954238 - 35954333
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||||||||||||||||||||||||| ||||  | | |||||||| ||||| |||||||||||| | | |||||||||||||||||||||||||||    
T  35954238 ttaccctctcttgtttagagggtaatt-accctatcatgatatcaaccaatcgaaatgtaatatagataggtaacattaaatgtcaaataaatgagt 35954333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 519 - 599
Target Start/End: Complemental strand, 42160072 - 42159992
Alignment:
Q  519 atttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaattttt 599  Q
    |||||||| || ||||||||| |||||||||||||| |||| |||||| ||||||||| ||||||||||||||||||||||    
T  42160072 atttaccctttcaagatatcagtcaatcaaaatgtactatacaaatgtcacattaaatatcaaataaatgagtcaattttt 42159992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 480 - 599
Target Start/End: Complemental strand, 52407450 - 52407333
Alignment:
Q  480 taggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtc 579  Q
    |||||||||| || |||||||||||||| |||| ||||| |||||||| | | |||||||| |||||||||||||||||| |     |||||||||||||    
T  52407450 taggttttttatagattaccctctcttggttag-gggta-tttaccccctcatgatatcaaccaatcaaaatgtaatatacattgacaacattaaatgtc 52407353  T
Q  580 aaataaatgagtcaattttt 599  Q
    ||||||||||||||||||||    
T  52407352 aaataaatgagtcaattttt 52407333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 477 - 559
Target Start/End: Complemental strand, 31032138 - 31032056
Alignment:
Q  477 atgtaggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatata 559  Q
    |||||||||||||||| ||||||||||||| ||||||||||| |||||||  | | |||||||| ||||||||||||||||||    
T  31032138 atgtaggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatata 31032056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 490 - 599
Target Start/End: Complemental strand, 30303151 - 30303043
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| |||||||||||||||||| || |||||  || ||  | |||||||| |||||||||||||||||| | | | |||||||||||||||||||||||    
T  30303151 ctacgttaccctctcttgtttaggggataattatcctctc-atgatatcaaccaatcaaaatgtaatatacataggcaacattaaatgtcaaataaatga 30303053  T
Q  590 gtcaattttt 599  Q
    ||||||||||    
T  30303052 gtcaattttt 30303043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 533 - 599
Target Start/End: Original strand, 46118157 - 46118223
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaattttt 599  Q
    |||||||| |||||||||||||||||| | | ||||||||| |||||||||||||||||||||||||    
T  46118157 gatatcaaccaatcaaaatgtaatatacataggtaacattatatgtcaaataaatgagtcaattttt 46118223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 490 - 591
Target Start/End: Original strand, 21096649 - 21096749
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| ||||||||||||||||||||||||| | || |  | | |||||||| |||||||||||||||||| | | | |||||||||||||||||||||||    
T  21096649 ctacgttaccctctcttgtttagagggtaaat-actctctcatgatatcaaccaatcaaaatgtaatatacataggaaacattaaatgtcaaataaatga 21096747  T
Q  590 gt 591  Q
    ||    
T  21096748 gt 21096749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 483 - 599
Target Start/End: Original strand, 30301000 - 30301113
Alignment:
Q  483 gttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaa 582  Q
    |||||||||| ||||||||||||| |||||||||| |||||||||   |  ||||||| |||||||||||||||||| |   | ||  ||||||||||||    
T  30301000 gttttttctagattaccctctcttatttagagggt-atttacccc--catcatatcaaccaatcaaaatgtaatatacattggcaattttaaatgtcaaa 30301096  T
Q  583 taaatgagtcaattttt 599  Q
    |||||||||||||||||    
T  30301097 taaatgagtcaattttt 30301113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 533 - 589
Target Start/End: Original strand, 51086624 - 51086680
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||||||| |||||||||||||||||||| | |||||||||||||||||||||||||    
T  51086624 gatatcaaccaatcaaaatgtaatatatataggtaacattaaatgtcaaataaatga 51086680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 495 - 599
Target Start/End: Original strand, 52404484 - 52404587
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaa 594  Q
    ||||||| |||||||||  |||||||| ||||  | | |||||||| |||||||||| ||||||||| |   ||||||||||||||||||||||||||||    
T  52404484 ttaccctatcttgtttatggggtaatt-accctctcatgatatcaaccaatcaaaatataatatatatagacaacattaaatgtcaaataaatgagtcaa 52404582  T
Q  595 ttttt 599  Q
    |||||    
T  52404583 ttttt 52404587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 544 - 599
Target Start/End: Original strand, 23258891 - 23258946
Alignment:
Q  544 atcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaattttt 599  Q
    |||||||||||||||| || ||||||||||||| ||||||||||||||||||||||    
T  23258891 atcaaaatgtaatatacaattgtaacattaaatctcaaataaatgagtcaattttt 23258946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 480 - 559
Target Start/End: Complemental strand, 33706629 - 33706550
Alignment:
Q  480 taggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatata 559  Q
    ||||||||||||| |||||||| |||| ||||||||||| |||||||  | | |||||||| ||||||||||||||||||    
T  33706629 taggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatata 33706550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 484 - 599
Target Start/End: Complemental strand, 35956371 - 35956259
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    ||||||||| |||||||||||||||||||||||| ||||||||  | | |||||||| |||||||||| ||||||| |     ||||||||||| |  ||    
T  35956371 ttttttctatattaccctctcttgtttagagggt-atttaccctctcatgatatcaaccaatcaaaatataatatacattgacaacattaaatgcc--at 35956275  T
Q  584 aaatgagtcaattttt 599  Q
    ||||||||||||||||    
T  35956274 aaatgagtcaattttt 35956259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 7154919 - 7154804
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgt-aacattaaatgtca 580  Q
    |||||||| || ||||||||||||| ||||||||||| ||||||   | | |||||||| ||||||||||||||||||  | ||| || ||||||||||     
T  7154919 ggttttttttagattaccctctcttatttagagggtattttaccttatcatgatatcaaccaatcaaaatgtaatata-cattgtcaatattaaatgtc- 7154822  T
Q  581 aataaatgagtcaattttt 599  Q
     ||||||||||||||||||    
T  7154821 -ataaatgagtcaattttt 7154804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 481 - 599
Target Start/End: Original strand, 33004462 - 33004578
Alignment:
Q  481 aggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtca 580  Q
    |||||||||||| ||||| ||||||||||||| |||| ||||||||  | |  |||||||  ||||||||||||||||| |     |||||||||||||     
T  33004462 aggttttttctaaattactctctcttgtttagggggt-atttaccctctcataatatcaactaatcaaaatgtaatatacattgacaacattaaatgtc- 33004559  T
Q  581 aataaatgagtcaattttt 599  Q
    |||||||||||||||||||    
T  33004560 aataaatgagtcaattttt 33004578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 480 - 599
Target Start/End: Original strand, 30837760 - 30837874
Alignment:
Q  480 taggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtc 579  Q
    ||||||||||||| ||||||||||||| |||||||| ||  ||| |   | | ||||||||||||||||||||||||||| |   | |||||||||||||    
T  30837760 taggttttttctagattaccctctcttatttagagg-ta--ttatcatctcatgatatcaatcaatcaaaatgtaatatacattggcaacattaaatgtc 30837856  T
Q  580 aaataaatgagtcaattttt 599  Q
      ||||||||||||||||||    
T  30837857 --ataaatgagtcaattttt 30837874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 36732543 - 36732428
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaat--gtaacattaaatgtc 579  Q
    ||||||||||| ||||||||| ||| |||||||||| |||||||| || | |||||||| |||| ||||||||| ||||| ||    |||||||||||||    
T  36732543 ggttttttctagattaccctcgcttatttagagggt-atttaccctttcatgatatcaaccaattaaaatgtaa-atatacattgacaacattaaatgtc 36732446  T
Q  580 aaataaatgagtcaattttt 599  Q
      ||||||||||||||||||    
T  36732445 --ataaatgagtcaattttt 36732428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 533 - 591
Target Start/End: Complemental strand, 14488951 - 14488893
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    |||||||| |||| ||||||||||||| | | |||| ||||||||||||||||||||||    
T  14488951 gatatcaaccaataaaaatgtaatatacataagtaatattaaatgtcaaataaatgagt 14488893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 533 - 599
Target Start/End: Complemental strand, 21097399 - 21097335
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaattttt 599  Q
    |||||||| ||||||||||||||||||||   | |||||||||||||  |||||||| |||||||||    
T  21097399 gatatcaaccaatcaaaatgtaatatatattggcaacattaaatgtc--ataaatgaatcaattttt 21097335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 481 - 512
Target Start/End: Original strand, 23258838 - 23258869
Alignment:
Q  481 aggttttttctacattaccctctcttgtttag 512  Q
    ||||||||||||||||||||||||||||||||    
T  23258838 aggttttttctacattaccctctcttgtttag 23258869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 567 - 597
Target Start/End: Original strand, 12768194 - 12768224
Alignment:
Q  567 aacattaaatgtcaaataaatgagtcaattt 597  Q
    |||||||||||||||||||||||||||||||    
T  12768194 aacattaaatgtcaaataaatgagtcaattt 12768224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 533 - 599
Target Start/End: Original strand, 29647590 - 29647656
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaattttt 599  Q
    |||||||| |||||||||| ||||||| |     ||| |||||||||||||||||||||||||||||    
T  29647590 gatatcaaccaatcaaaatataatatacattgacaacgttaaatgtcaaataaatgagtcaattttt 29647656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 533 - 599
Target Start/End: Complemental strand, 33006549 - 33006483
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaattttt 599  Q
    |||||| | ||||||||| |||||||| | |   ||||||||||||||||||||||| |||||||||    
T  33006549 gatatctaccaatcaaaaagtaatatacatagacaacattaaatgtcaaataaatgaatcaattttt 33006483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 559
Target Start/End: Original strand, 35954145 - 35954221
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatata 559  Q
    |||||||| || ||||| |||| |||||||||| ||| |||||||  | | |||||||| ||||||||||||||||||    
T  35954145 ggttttttttaaattactctcttttgtttagagagta-tttaccctctcatgatatcaaccaatcaaaatgtaatata 35954221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 567 - 599
Target Start/End: Complemental strand, 34334305 - 34334273
Alignment:
Q  567 aacattaaatgtcaaataaatgagtcaattttt 599  Q
    ||||||||||||||||||||| |||||||||||    
T  34334305 aacattaaatgtcaaataaataagtcaattttt 34334273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 482 - 526
Target Start/End: Original strand, 44510431 - 44510475
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttaccc 526  Q
    ||||||||||| |||||||| |||| ||||||||||| |||||||    
T  44510431 ggttttttctagattaccctatcttatttagagggtattttaccc 44510475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 481 - 517
Target Start/End: Complemental strand, 46464617 - 46464581
Alignment:
Q  481 aggttttttctacattaccctctcttgtttagagggt 517  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  46464617 aggttttttctagattaccctctcttgtttagggggt 46464581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 4e-46; HSPs: 82)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 481 - 603
Target Start/End: Original strand, 41405937 - 41406058
Alignment:
Q  481 aggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtca 580  Q
    |||||||||||||||||||||||||||||||| ||||| |||| ||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  41405937 aggttttttctacattaccctctcttgtttagggggta-tttatcccttcaagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaatgtca 41406035  T
Q  581 aataaatgagtcaatttttctat 603  Q
    |||||||||||||||||||||||    
T  41406036 aataaatgagtcaatttttctat 41406058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 482 - 603
Target Start/End: Complemental strand, 33982671 - 33982551
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||| |||||||||| ||||||| |||||||||||||||||||||    
T  33982671 ggttttttctacattaccctctcttgtttagagggta-tttaccccttcaagataccaaccaatcaaaatataatatacaaatgtaacattaaatgtcaa 33982573  T
Q  582 ataaatgagtcaatttttctat 603  Q
    |||||||||| |||||||||||    
T  33982572 ataaatgagttaatttttctat 33982551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 481 - 599
Target Start/End: Complemental strand, 1602476 - 1602359
Alignment:
Q  481 aggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtca 580  Q
    ||||||||||||||||||||||| ||||||| |||||| ||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1602476 aggttttttctacattaccctcttttgtttatagggta-tttattcctttaagatatcaatcaatcaaaatgtaatatacaaatgtaacattaaatgtca 1602378  T
Q  581 aataaatgagtcaattttt 599  Q
    ||||||| |||||||||||    
T  1602377 aataaattagtcaattttt 1602359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 482 - 599
Target Start/End: Original strand, 19063904 - 19064021
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    |||||||||||||||||||||||||||||||||| || ||||||| || |||||||||| ||||||||||| |||||| |||||||||||||||||||||    
T  19063904 ggttttttctacattaccctctcttgtttagaggatattttaccctttcaagatatcaaccaatcaaaatgcaatatacaaatgtaacattaaatgtcaa 19064003  T
Q  582 ataaatgagtcaattttt 599  Q
    |||||||| |||||||||    
T  19064004 ataaatgactcaattttt 19064021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 497 - 603
Target Start/End: Complemental strand, 37708426 - 37708321
Alignment:
Q  497 accctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaatt 596  Q
    |||||||||||||||||||||| ||||| | ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37708426 accctctcttgtttagagggta-tttactcttttaagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaatgtcaaataaatgagtcaatt 37708328  T
Q  597 tttctat 603  Q
    |||||||    
T  37708327 tttctat 37708321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 586238 - 586122
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||||||||| ||||||| ||||  ||||| |||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  586238 ggttttttctacattactctctcttatttatggggta-tttaccccttcaagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaatgtcaa 586140  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  586139 ataaatgagtcaattttt 586122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 494 - 603
Target Start/End: Complemental strand, 38229833 - 38229725
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtca 593  Q
    |||||| |||||||||||||||||| ||||||| || |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  38229833 attaccatctcttgtttagagggta-tttaccctttcaagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaatgtcaaataaatgagtca 38229735  T
Q  594 atttttctat 603  Q
    ||||||||||    
T  38229734 atttttctat 38229725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 482 - 599
Target Start/End: Original strand, 47251966 - 47252082
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||| |||||||||||| ||||| |||||||| |||| |||||||    
T  47251966 ggttttttctacattaccctctcttgtttagggggta-tttaccccttcaagatatcaaccaatcaaaatgtgatatacaaatgtaatattatatgtcaa 47252064  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  47252065 ataaatgagtcaattttt 47252082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 485 - 603
Target Start/End: Original strand, 38224340 - 38224457
Alignment:
Q  485 tttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaata 584  Q
    |||||||||||||| || ||||||||||||| || |||| ||||| |||||||||| |||||||||||| ||||| ||||||||||||||||||||||||    
T  38224340 tttttctacattactctatcttgtttagaggata-tttatcccttcaagatatcaaccaatcaaaatgtgatatacaaatgtaacattaaatgtcaaata 38224438  T
Q  585 aatgagtcaatttttctat 603  Q
    |||||||||||||||||||    
T  38224439 aatgagtcaatttttctat 38224457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 495 - 591
Target Start/End: Original strand, 4859584 - 4859680
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||||||||||||||||||||||||||||||  | |  ||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||    
T  4859584 ttaccctctcttgtttagagggtaatttaccctctcatcatatcaaccaatcaaaatgtaatatatataggtaacattaaatgtcaaataaatgagt 4859680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 495 - 591
Target Start/End: Complemental strand, 40015843 - 40015747
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||| ||| ||||||||||||||||||||||  | | ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  40015843 ttaccttcttttgtttagagggtaatttaccctctcatgatatcaatcaatcaaaatgtaatatatataggtaacattaaatgtcaaataaatgagt 40015747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 496 - 603
Target Start/End: Complemental strand, 41408230 - 41408124
Alignment:
Q  496 taccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaat 595  Q
    ||||||||||||||||||||||  |||| || || || ||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  41408230 taccctctcttgtttagagggtg-tttatcctttcaatatatcaaccaatcaaaatgtaatatacaaatgtaatattaaatgtcaaataaatgagtcaat 41408132  T
Q  596 ttttctat 603  Q
     |||||||    
T  41408131 ctttctat 41408124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 489 - 591
Target Start/End: Original strand, 20119879 - 20119981
Alignment:
Q  489 tctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatg 588  Q
    ||||| ||||||||||||||||||||||||||||||||  | | |||||||| |||||||||||||||||| | | ||||| ||||||||||||||||||    
T  20119879 tctacgttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacataggtaactttaaatgtcaaataaatg 20119978  T
Q  589 agt 591  Q
    |||    
T  20119979 agt 20119981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 521 - 603
Target Start/End: Original strand, 33979400 - 33979482
Alignment:
Q  521 ttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaatttttctat 603  Q
    |||||| || |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  33979400 ttaccctttcaagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaatgtcaaataaataagtcaatttttctat 33979482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 494 - 603
Target Start/End: Original strand, 584711 - 584819
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtca 593  Q
    ||||||||||||||||||  ||||| ||||||| || ||||||| || |||||||||| ||||||| |||||||| |||||||||||||||| |||||||    
T  584711 attaccctctcttgtttatggggta-tttaccctttcaagatataaaccaatcaaaatataatatacaaatgtaatattaaatgtcaaataactgagtca 584809  T
Q  594 atttttctat 603  Q
    ||||||||||    
T  584810 atttttctat 584819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 494 - 603
Target Start/End: Original strand, 1598906 - 1599013
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtca 593  Q
    |||||||||| ||||||| |||||| ||||||| || |||||||||| |||||||||||||||||| |||||||||||||||||  ||||||||||||||    
T  1598906 attaccctcttttgttta-agggta-tttaccctttcaagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaatgataaataaatgagtca 1599003  T
Q  594 atttttctat 603  Q
    | ||||||||    
T  1599004 aattttctat 1599013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 490 - 591
Target Start/End: Complemental strand, 44459467 - 44459366
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| ||||||||||||||||||||||||||||||||  | |  ||||||| |||||||||||||||||| | | |||||||||||||||||||||||||    
T  44459467 ctacgttaccctctcttgtttagagggtaatttaccctctcataatatcaaccaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatga 44459368  T
Q  590 gt 591  Q
    ||    
T  44459367 gt 44459366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 519 - 600
Target Start/End: Complemental strand, 47254791 - 47254710
Alignment:
Q  519 atttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaatttttc 600  Q
    |||||||| || |||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  47254791 atttaccctttcaagatatcaaccaatcaaaatataatatacaaatgtaacattaaatgtcaaataaatgagtcaatttttc 47254710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 495 - 591
Target Start/End: Original strand, 41336130 - 41336226
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||||||||||||||||||||||||||| ||  | | ||||||||||||||||||||||||||| | | |||| ||||||||||||||||||||||    
T  41336130 ttaccctctcttgtttagagggtaatttatcctctcatgatatcaatcaatcaaaatgtaatatacataggtaatattaaatgtcaaataaatgagt 41336226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 495 - 591
Target Start/End: Original strand, 48683077 - 48683172
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||||||||||||||||||||||||| |||| ||||  ||||||| |||| ||||||||||||| | |||||||||||||||||||||||||||||    
T  48683077 ttaccctctcttgtttagagggtaatt-acccttttattatatcaaccaattaaaatgtaatatacatatgtaacattaaatgtcaaataaatgagt 48683172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 489 - 603
Target Start/End: Original strand, 43542525 - 43542637
Alignment:
Q  489 tctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatg 588  Q
    |||| ||||||||||||||||||  ||||| ||||||  || || |||||||| ||||||||||||||||| |||| ||||||||||||||||||||||     
T  43542525 tctagattaccctctcttgtttaaggggta-tttaccttttcaa-atatcaattaatcaaaatgtaatatacaaatataacattaaatgtcaaataaatt 43542622  T
Q  589 agtcaatttttctat 603  Q
    |||||||||||||||    
T  43542623 agtcaatttttctat 43542637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 489 - 591
Target Start/End: Original strand, 44882577 - 44882678
Alignment:
Q  489 tctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatg 588  Q
    |||||||||||| |||||||||||||| ||||||||||  ||| |||||||| |||||||||||||||||| | | |||| |||||||||||||||||||    
T  44882577 tctacattacccactcttgtttagagg-taatttaccctcttatgatatcaaccaatcaaaatgtaatatacataggtaatattaaatgtcaaataaatg 44882675  T
Q  589 agt 591  Q
    |||    
T  44882676 agt 44882678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 48684647 - 48684533
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| ||||||||||||| |||||||| || ||||||| |||| |||||||| |||||||||||||||||| |   |||||||||||||||      
T  48684647 ggttttttctagattaccctctcttatttagaggata-tttacccttttatgatatcaaccaatcaaaatgtaatatacattggtaacattaaatgtc-- 48684551  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  48684550 ataaatgagtcaattttt 48684533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 542 - 603
Target Start/End: Complemental strand, 596396 - 596335
Alignment:
Q  542 caatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaatttttctat 603  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  596396 caatcaaaatgtaatatataaatgtaacattaaatatcaaataaatgagtcaatttttctat 596335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 490 - 591
Target Start/End: Complemental strand, 725697 - 725596
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| ||||||||||||||||||||||||||||||||  | | |||||||| |||||||||| ||||||| | |  ||||||||||||||||||||||||    
T  725697 ctacgttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatataatatacatagataacattaaatgtcaaataaatga 725598  T
Q  590 gt 591  Q
    ||    
T  725597 gt 725596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 490 - 591
Target Start/End: Complemental strand, 16277737 - 16277636
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| |||| |||||||||||||||||||||||||||  | | |||||||| |||||||||||||||||| | | | |||||||||||||||||||||||    
T  16277737 ctacgttactctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacatagggaacattaaatgtcaaataaatga 16277638  T
Q  590 gt 591  Q
    ||    
T  16277637 gt 16277636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 494 - 591
Target Start/End: Complemental strand, 9663758 - 9663662
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    |||||||||||||||||||||||||||| || |  | | |||||||| |||||||||||||||||| | | |||||||||||||||||||||||||||    
T  9663758 attaccctctcttgtttagagggtaatt-actctctcatgatatcaaccaatcaaaatgtaatatacataagtaacattaaatgtcaaataaatgagt 9663662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 483 - 599
Target Start/End: Original strand, 44456896 - 44457010
Alignment:
Q  483 gttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaa 582  Q
    |||||||||| ||||||||||||| ||||||||||| |||||||  | | |||||||| |||||||||||||||||| |   | |||||||||||||  |    
T  44456896 gttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtc--a 44456993  T
Q  583 taaatgagtcaattttt 599  Q
    |||||||||||||||||    
T  44456994 taaatgagtcaattttt 44457010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 484 - 599
Target Start/End: Original strand, 3412676 - 3412789
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    ||||||||| ||||||||||||| ||||||||||| |||||||  ||| |||||||| |||||||||| ||||||| |   | |||||||||||||  ||    
T  3412676 ttttttctagattaccctctcttatttagagggtattttaccctcttatgatatcaaccaatcaaaatataatatacattggcaacattaaatgtc--at 3412773  T
Q  584 aaatgagtcaattttt 599  Q
    ||||||||||||||||    
T  3412774 aaatgagtcaattttt 3412789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 491 - 591
Target Start/End: Complemental strand, 33246811 - 33246712
Alignment:
Q  491 tacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgag 590  Q
    ||||||||||||||||||||||||| |||||||| |  | | |||||||| |||||||||||||||||| | | ||||||||||||||||| ||||||||    
T  33246811 tacattaccctctcttgtttagagg-taatttactctctcatgatatcaaccaatcaaaatgtaatatacataggtaacattaaatgtcaagtaaatgag 33246713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 495 - 591
Target Start/End: Complemental strand, 41858712 - 41858616
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||||||||||||||||||||||||||||||  | | ||||||||  ||| ||||||||||||||| | |||| |||| |||||||||||||||||    
T  41858712 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaactaattaaaatgtaatatatataggtaatattagatgtcaaataaatgagt 41858616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 491 - 599
Target Start/End: Complemental strand, 43545236 - 43545129
Alignment:
Q  491 tacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgag 590  Q
    |||||||||||||||||||||   | || |||||||||| || ||||||| ||||||||||||||| |  ||||||||||||||||||||||| |||||     
T  43545236 tacattaccctctcttgtttatgagata-tttaccccttcaaaatatcaaccaatcaaaatgtaatctccaaatgtaacattaaatgtcaaatgaatgaa 43545138  T
Q  591 tcaattttt 599  Q
    |||||||||    
T  43545137 tcaattttt 43545129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 495 - 591
Target Start/End: Complemental strand, 46555650 - 46555554
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||||||||||||||||||||||||||| ||  | |  ||||||| |||||||||| ||||||| | | |||||||||||||||||||||||||||    
T  46555650 ttaccctctcttgtttagagggtaatttatcctctcataatatcaaccaatcaaaatataatatacataggtaacattaaatgtcaaataaatgagt 46555554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 484 - 599
Target Start/End: Complemental strand, 47505746 - 47505634
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    ||||||||| |||||||||||||||||||||| || |||||||||| | |||||||| |||||||||||||||||| |     |||||||||||||  ||    
T  47505746 ttttttctagattaccctctcttgtttagaggata-tttaccccttcatgatatcaaccaatcaaaatgtaatatacattgacaacattaaatgtc--at 47505650  T
Q  584 aaatgagtcaattttt 599  Q
    ||||||||||||||||    
T  47505649 aaatgagtcaattttt 47505634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 481 - 599
Target Start/End: Original strand, 16273907 - 16274023
Alignment:
Q  481 aggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtca 580  Q
    |||||||||||| ||||||||||||| ||||||||||| |||||||  | | |||||||| |||||||||||||||||| |     |||||||||||||     
T  16273907 aggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattgacaacattaaatgtc- 16274005  T
Q  581 aataaatgagtcaattttt 599  Q
     ||||||||||||||||||    
T  16274006 -ataaatgagtcaattttt 16274023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 481 - 599
Target Start/End: Complemental strand, 41338353 - 41338237
Alignment:
Q  481 aggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtca 580  Q
    |||||||||||| ||||||||||||| ||||||||||| ||||||   | | |||||||| |||||||||||||||||| |   | |||||||||||||     
T  41338353 aggttttttctagattaccctctcttatttagagggtattttaccttctcatgatatcaaccaatcaaaatgtaatatacattagcaacattaaatgtc- 41338255  T
Q  581 aataaatgagtcaattttt 599  Q
     ||||||||||||||||||    
T  41338254 -ataaatgagtcaattttt 41338237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 490 - 591
Target Start/End: Complemental strand, 17968471 - 17968371
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| ||| |||||||| |||||||||||||| || |  ||| |||||||| |||||||||||||||||| | | |||||||||||||||||||||||||    
T  17968471 ctacgttatcctctcttatttagagggtaatt-acgctcttatgatatcaaccaatcaaaatgtaatatacacaggtaacattaaatgtcaaataaatga 17968373  T
Q  590 gt 591  Q
    ||    
T  17968372 gt 17968371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 475 - 599
Target Start/End: Original strand, 23592531 - 23592652
Alignment:
Q  475 ttatgtaggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaa 574  Q
    |||| ||||||||||||| ||||||||||||| |||||||||| ||||| || || | ||||||||||||||||||||||||||| |     ||||||||    
T  23592531 ttatataggttttttctagattaccctctcttatttagagggt-atttatcctttcatgatatcaatcaatcaaaatgtaatatacattgacaacattaa 23592629  T
Q  575 atgtcaaataaatgagtcaattttt 599  Q
    |||||  ||||| ||||||||||||    
T  23592630 atgtc--ataaacgagtcaattttt 23592652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 490 - 591
Target Start/End: Complemental strand, 28589766 - 28589665
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| |||| ||||||||||||||| ||||||||| | || | ||| ||||  ||||||||||||||||| | | |||||||||||||||||||||||||    
T  28589766 ctacgttacactctcttgtttagagagtaatttacactttcatgatgtcaactaatcaaaatgtaatatacagaggtaacattaaatgtcaaataaatga 28589667  T
Q  590 gt 591  Q
    ||    
T  28589666 gt 28589665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 483 - 603
Target Start/End: Complemental strand, 19233850 - 19233731
Alignment:
Q  483 gttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaa 582  Q
    ||||||| || |||||||||||||| |||| | ||| |||||||| | |  |||||||||||||||||| ||||||| |   | ||||||||||| ||||    
T  19233850 gttttttttagattaccctctcttgcttagggagta-tttaccccctcataatatcaatcaatcaaaatataatatacattggcaacattaaatgccaaa 19233752  T
Q  583 taaatgagtcaatttttctat 603  Q
    |||||||||||||||||||||    
T  19233751 taaatgagtcaatttttctat 19233731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 484 - 599
Target Start/End: Original strand, 40013623 - 40013736
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    ||||||||| ||||||||||||| ||||||||||| ||||| |  | | |||||||| ||||||||||||||||||||     |||||||||||||  ||    
T  40013623 ttttttctagattaccctctcttatttagagggtattttactctctcatgatatcaaccaatcaaaatgtaatatatattgacaacattaaatgtc--at 40013720  T
Q  584 aaatgagtcaattttt 599  Q
    ||||||||||||||||    
T  40013721 aaatgagtcaattttt 40013736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 21817429 - 21817316
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||| ||||| ||||||||||||| ||||||||||| |||||||  | | |||||||| |||||||||||||||||| |   | |||||||||||||      
T  21817429 ggtttcttctatattaccctctcttatttagagggtattttaccc--tcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtc-- 21817334  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  21817333 ataaatgagtcaattttt 21817316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 4861982 - 4861867
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| ||||||||||||| ||||||||||| ||||| |  | | |||||||| |||||||||||||||||| |     |||||||||||||      
T  4861982 ggttttttctagattaccctctcttatttagagggtattttactctctcatgatatcaaccaatcaaaatgtaatatacattgacaacattaaatgtc-- 4861885  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  4861884 ataaatgagtcaattttt 4861867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 482 - 599
Target Start/End: Original strand, 8391439 - 8391555
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||| ||| ||||||||||||||||||  ||||| |||| ||| | | |||||||| |||||||||||||| ||| |     |||||||||||||||    
T  8391439 ggtttttcctagattaccctctcttgtttatggggta-tttatcccctcatgatatcaaacaatcaaaatgtaacatacattgacaacattaaatgtcaa 8391537  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  8391538 ataaatgagtcaattttt 8391555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 494 - 591
Target Start/End: Original strand, 42825614 - 42825710
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||||||||||||||||| |  || | ||||  ||||||||||||| |||||||||||||||||| ||||||| ||||||||||  |||||||||||    
T  42825614 attaccctctcttgtttagggaata-tatacctttttaagatatcaaccaatcaaaatgtaatatacaaatgtatcattaaatgttcaataaatgagt 42825710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 484 - 599
Target Start/End: Original strand, 17286327 - 17286439
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    |||||| || |||||||||||||||||||||||| ||||||||  | | ||||||||||||||||||||||||||| |   | |||||||||| ||  |     
T  17286327 ttttttttagattaccctctcttgtttagagggt-atttaccctctcatgatatcaatcaatcaaaatgtaatatacattggcaacattaaatatc--ac 17286423  T
Q  584 aaatgagtcaattttt 599  Q
    ||||||||||||||||    
T  17286424 aaatgagtcaattttt 17286439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 531 - 591
Target Start/End: Original strand, 21815258 - 21815318
Alignment:
Q  531 aagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    |||||||||| |||||||||||||||||| | | |||||||||||||||||||||||||||    
T  21815258 aagatatcaaccaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatgagt 21815318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 484 - 599
Target Start/End: Original strand, 46553435 - 46553548
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    |||||| || |||| ||||| || ||||||||||| |||||||  | | |||||||| ||||||||||||||||||||   | |||||||||||||  ||    
T  46553435 ttttttttagattatcctcttttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatatattggcaacattaaatgtc--at 46553532  T
Q  584 aaatgagtcaattttt 599  Q
    ||||||||||||||||    
T  46553533 aaatgagtcaattttt 46553548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 485 - 599
Target Start/End: Complemental strand, 10934846 - 10934733
Alignment:
Q  485 tttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaata 584  Q
    |||||||| ||||||  |||||| ||||  ||||||||||||||  | ||||||||||||||||||| ||||||  | | | | ||||||||||||||||    
T  10934846 tttttctagattaccgcctcttgattaggaggtaatttacccctc-atgatatcaatcaatcaaaatataatatgcataggcatcattaaatgtcaaata 10934748  T
Q  585 aatgagtcaattttt 599  Q
    ||||| |||||||||    
T  10934747 aatgaatcaattttt 10934733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 482 - 599
Target Start/End: Original strand, 38179659 - 38179774
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    |||||||| || ||||||||||||| ||||||||||| |||||||  | | |||||||| ||||||||| |||||||| |     |||||||||||||      
T  38179659 ggttttttttagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaacgtaatatacattgacaacattaaatgtc-- 38179756  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  38179757 ataaatgagtcaattttt 38179774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 482 - 599
Target Start/End: Original strand, 41287553 - 41287667
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| || ||||||||||||||||||||| ||||||||  | | ||||||||  |||||||||||||||||||     |||||||||||||      
T  41287553 ggttttttctagataaccctctcttgtttagagggt-atttaccctctcatgatatcaactaatcaaaatgtaatatatattgacaacattaaatgtc-- 41287649  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||| ||||||||||    
T  41287650 ataaatgggtcaattttt 41287667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 497 - 570
Target Start/End: Complemental strand, 37624208 - 37624136
Alignment:
Q  497 accctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaaca 570  Q
    |||||||||||||||| ||||| ||||||| || |||||||||| |||||||||||||||||| |||| |||||    
T  37624208 accctctcttgtttagggggta-tttaccctttcaagatatcaaccaatcaaaatgtaatatacaaatctaaca 37624136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 490 - 591
Target Start/End: Complemental strand, 48952340 - 48952239
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| |||| |||||||||||| ||||||||||||||  | | | | ||||  ||| ||||||||||||||| | ||||||||| |||||||||||||||    
T  48952340 ctacgttactctctcttgtttatagggtaatttaccctctcatggtttcaactaattaaaatgtaatatatataggtaacattagatgtcaaataaatga 48952241  T
Q  590 gt 591  Q
    ||    
T  48952240 gt 48952239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 480 - 599
Target Start/End: Original strand, 723482 - 723599
Alignment:
Q  480 taggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtc 579  Q
    ||||||||||||| ||||||||||||| ||||||||||| |||||||  | | |||||||| |||| |||| |||||||| |     |||||||||||||    
T  723482 taggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaataaaaacgtaatatacattgacaacattaaatgtc 723581  T
Q  580 aaataaatgagtcaattttt 599  Q
      |||||||| |||||||||    
T  723582 --ataaatgattcaattttt 723599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 482 - 596
Target Start/End: Original strand, 4657018 - 4657124
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| ||||||||||||| ||||||||||| |||||      | |||||||| |||||||||||||||||| |    ||||||||||||||      
T  4657018 ggttttttctagattaccctctcttatttagagggtattttac------atgatatcaaccaatcaaaatgtaatatacattgataacattaaatgtc-- 4657109  T
Q  582 ataaatgagtcaatt 596  Q
    |||||||||||||||    
T  4657110 ataaatgagtcaatt 4657124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 484 - 599
Target Start/End: Original strand, 9659011 - 9659123
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    ||||||||| |||||||| ||||||||||||||| ||||||||  | | ||||| || |||||||||||||||||| |     |||||||||||||  ||    
T  9659011 ttttttctagattaccctatcttgtttagagggt-atttaccctctcatgatataaaccaatcaaaatgtaatatacattgacaacattaaatgtc--at 9659107  T
Q  584 aaatgagtcaattttt 599  Q
    ||||||||||||||||    
T  9659108 aaatgagtcaattttt 9659123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 534 - 597
Target Start/End: Original strand, 37622736 - 37622800
Alignment:
Q  534 atatcaatcaatcaaaatgtaatatataaa-tgtaacattaaatgtcaaataaatgagtcaattt 597  Q
    ||||||| |||||||||||||||||| ||| ||||||||| |||||||||||||| |||||||||    
T  37622736 atatcaaccaatcaaaatgtaatatacaaaatgtaacattcaatgtcaaataaataagtcaattt 37622800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 484 - 599
Target Start/End: Original strand, 41856272 - 41856385
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    ||||||||| |||||||||| || | ||||||||| |||||||  | | |||||||| |||||||||||||||||| |    ||||||||||| ||  ||    
T  41856272 ttttttctagattaccctcttttatatagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattgataacattaaatatc--at 41856369  T
Q  584 aaatgagtcaattttt 599  Q
    ||||||||||||||||    
T  41856370 aaatgagtcaattttt 41856385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 484 - 559
Target Start/End: Original strand, 47906947 - 47907022
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatata 559  Q
    ||||||||| ||| ||||||||| ||||||||||| |||||||  | | |||||||| ||||||||||||||||||    
T  47906947 ttttttctagatttccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatata 47907022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 490 - 591
Target Start/End: Complemental strand, 5374647 - 5374552
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| |||||||||||||||||||||||||||  || |      ||||||| |||||||||||||||||| | | || ||||||||||| ||||||||||    
T  5374647 ctacgttaccctctcttgtttagagggtaattatcctc------atatcaaccaatcaaaatgtaatatacataagttacattaaatgttaaataaatga 5374554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 533 - 591
Target Start/End: Complemental strand, 18995098 - 18995040
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    |||||||| |||||||||||||||||| | | |||||||||||| ||||||||||||||    
T  18995098 gatatcaaccaatcaaaatgtaatatacataggtaacattaaatttcaaataaatgagt 18995040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 489 - 591
Target Start/End: Complemental strand, 23594697 - 23594597
Alignment:
Q  489 tctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatg 588  Q
    ||||| ||||||| ||||||||||||| |||||  || ||| | |||||||| |||||||||||||||||| | | |||| |||||||||||| ||||||    
T  23594697 tctacgttaccctatcttgtttagagg-taattgtcctctt-atgatatcaaccaatcaaaatgtaatatacataggtaatattaaatgtcaattaaatg 23594600  T
Q  589 agt 591  Q
    |||    
T  23594599 agt 23594597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 533 - 591
Target Start/End: Complemental strand, 30760183 - 30760125
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||||||  ||||||||||||||||| | | |||||||||||||||||||||||||||    
T  30760183 gatatcaactaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatgagt 30760125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 494 - 599
Target Start/End: Complemental strand, 46160786 - 46160689
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtca 593  Q
    |||| |||||||||||||| ||||| ||||||  ||||||||||||| |||| |||||||||||||       ||||||||||||||||||||||||| |    
T  46160786 attaacctctcttgtttag-gggta-tttacctttttaagatatcaaccaattaaaatgtaatata------caacattaaatgtcaaataaatgagtaa 46160695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 533 - 591
Target Start/End: Complemental strand, 47909466 - 47909408
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    |||||||| |||||||||||||||||| | | ||||||| |||||||||||||||||||    
T  47909466 gatatcaaccaatcaaaatgtaatatacataggtaacataaaatgtcaaataaatgagt 47909408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 494 - 599
Target Start/End: Complemental strand, 44884817 - 44884718
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtca 593  Q
    ||||| ||||||| ||||||||||| ||||||| |    |||||||| |||||||||||||||||| |   | |||||||||||||  ||||||||||||    
T  44884817 attactctctcttatttagagggtattttacccat----gatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtc--ataaatgagtca 44884724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 482 - 558
Target Start/End: Complemental strand, 20122396 - 20122320
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatat 558  Q
    ||||||||||| ||||||||||||| ||||||||||| |||||||  | |  ||||||| | |||||||||||||||    
T  20122396 ggttttttctagattaccctctcttatttagagggtattttaccctctcattatatcaacctatcaaaatgtaatat 20122320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 519 - 599
Target Start/End: Original strand, 46934264 - 46934344
Alignment:
Q  519 atttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaattttt 599  Q
    |||||||| |||| |||||||| ||||||||||||| |||| |     |||||||||| ||||||||||||||||||||||    
T  46934264 atttacccatttatgatatcaaccaatcaaaatgtagtatacattgccaacattaaatatcaaataaatgagtcaattttt 46934344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 533 - 599
Target Start/End: Complemental strand, 8393448 - 8393381
Alignment:
Q  533 gatatcaa-tcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaattttt 599  Q
    |||||||| ||||| ||||||||||||| | |  ||||||||||||||||||||||||||| ||||||    
T  8393448 gatatcaactcaattaaaatgtaatatacatagataacattaaatgtcaaataaatgagtcgattttt 8393381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 481 - 599
Target Start/End: Original strand, 48950230 - 48950346
Alignment:
Q  481 aggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtca 580  Q
    |||||||||||| ||||||||||||| | || |||||| |||||||  | | ||||| || |||||||||||||||||| |     |||||||||| ||     
T  48950230 aggttttttctagattaccctctcttatataaagggtattttaccctctcatgatattaaccaatcaaaatgtaatatacattgacaacattaaatatc- 48950328  T
Q  581 aataaatgagtcaattttt 599  Q
     ||||||||||||||||||    
T  48950329 -ataaatgagtcaattttt 48950346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 533 - 599
Target Start/End: Original strand, 21729630 - 21729696
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaattttt 599  Q
    |||||| |||||||||||| ||||||| | |  ||||| |||||||||||||||||| |||||||||    
T  21729630 gatatctatcaatcaaaatttaatatacatagataacagtaaatgtcaaataaatgaatcaattttt 21729696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 533 - 599
Target Start/End: Complemental strand, 21737465 - 21737400
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaattttt 599  Q
    |||||||| |||||||||||||||||| |   | ||||||||||||| |||||||||||||||||||    
T  21737465 gatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtc-aataaatgagtcaattttt 21737400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 533 - 591
Target Start/End: Complemental strand, 48607746 - 48607688
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    |||||||| ||||||||||| |||||| | | |||| ||||||||||||||||||||||    
T  48607746 gatatcaaccaatcaaaatgcaatatacataagtaatattaaatgtcaaataaatgagt 48607688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 542 - 591
Target Start/End: Original strand, 4924809 - 4924858
Alignment:
Q  542 caatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    |||||||||||||||||| | | |||| ||||||||||||||||||||||    
T  4924809 caatcaaaatgtaatatacataggtaatattaaatgtcaaataaatgagt 4924858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 490 - 587
Target Start/End: Complemental strand, 41289731 - 41289636
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaat 587  Q
    |||| ||| |||||||||||||| |||||||| ||||  | | | ||||||||||| ||||||||||||| | | | |||||||||||||||||||||    
T  41289731 ctacgttatcctctcttgtttag-gggtaatt-accctctcatgttatcaatcaataaaaatgtaatatacataggcaacattaaatgtcaaataaat 41289636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 547 - 591
Target Start/End: Complemental strand, 3416252 - 3416208
Alignment:
Q  547 aaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||||||||||| | | |||||||||||||||||||||||||||    
T  3416252 aaaatgtaatatacataggtaacattaaatgtcaaataaatgagt 3416208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 533 - 589
Target Start/End: Original strand, 46000573 - 46000629
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    ||||||||| ||||||||||||||||| | |  ||| ||||||||||||||||||||    
T  46000573 gatatcaattaatcaaaatgtaatatacatagataatattaaatgtcaaataaatga 46000629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 561 - 600
Target Start/End: Complemental strand, 42834005 - 42833966
Alignment:
Q  561 aaatgtaacattaaatgtcaaataaatgagtcaatttttc 600  Q
    |||| ||||||||||| |||||||||||||||||||||||    
T  42834005 aaatataacattaaatatcaaataaatgagtcaatttttc 42833966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 533 - 599
Target Start/End: Original strand, 48605737 - 48605801
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaattttt 599  Q
    |||||||| |||||||||||||||||| |    ||||||||||||||  ||||||||||||||||||    
T  48605737 gatatcaaccaatcaaaatgtaatatacattgataacattaaatgtc--ataaatgagtcaattttt 48605801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 480 - 526
Target Start/End: Original strand, 33244605 - 33244651
Alignment:
Q  480 taggttttttctacattaccctctcttgtttagagggtaatttaccc 526  Q
    ||||||||||||| ||||||||||||| ||||||| ||| |||||||    
T  33244605 taggttttttctagattaccctctcttatttagagagtattttaccc 33244651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 551
Target Start/End: Complemental strand, 42834069 - 42834002
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaat 551  Q
    |||||||||||  ||||||| |||||||||| ||||| || ||||||| || ||||||||||||||||||    
T  42834069 ggttttttctatgttaccctatcttgtttag-gggtactt-accccttcaaaatatcaatcaatcaaaat 42834002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 534 - 599
Target Start/End: Complemental strand, 46936331 - 46936266
Alignment:
Q  534 atatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaattttt 599  Q
    ||||||| |||||||||| ||||||| | |   || ||||||||| ||||||||||||||||||||    
T  46936331 atatcaaccaatcaaaatctaatatacataaacaatattaaatgttaaataaatgagtcaattttt 46936266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 2e-45; HSPs: 108)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 482 - 603
Target Start/End: Original strand, 50935460 - 50935580
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||| |||||||||| ||||||| |||||||||||||||||||||    
T  50935460 ggttttttctacattaccctctcttgtttagagggta-tttaccctttcaagatatcaaccaatcaaaatataatatacaaatgtaacattaaatgtcaa 50935558  T
Q  582 ataaatgagtcaatttttctat 603  Q
    ||||||||||||||||||||||    
T  50935559 ataaatgagtcaatttttctat 50935580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 483 - 603
Target Start/End: Complemental strand, 41889772 - 41889651
Alignment:
Q  483 gttttttctacattaccctctcttgtttagagggtaattt-acccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||| || |||| || |||||||||||||||||| |||||||||||||||||||||    
T  41889772 gttttttttacattaccctctcttgtttagagggtatttttaccccttcaaaatattaaccaatcaaaatgtaatatacaaatgtaacattaaatgtcaa 41889673  T
Q  582 ataaatgagtcaatttttctat 603  Q
    ||||||||||||||||||||||    
T  41889672 ataaatgagtcaatttttctat 41889651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 494 - 599
Target Start/End: Original strand, 22977839 - 22977943
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtca 593  Q
    ||||||||||||||||||| ||||| ||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  22977839 attaccctctcttgtttagggggta-tttacccttttaagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaatgtcaaataaatgagtca 22977937  T
Q  594 attttt 599  Q
    ||||||    
T  22977938 attttt 22977943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 481 - 598
Target Start/End: Original strand, 48071721 - 48071837
Alignment:
Q  481 aggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtca 580  Q
    ||||||||| ||||||||||||||||||||||  |||| ||||||| ||||||||||||| |||||||||| ||||||| ||||||||||||||||||||    
T  48071721 aggttttttttacattaccctctcttgtttaggaggta-tttacccttttaagatatcaaccaatcaaaatataatatacaaatgtaacattaaatgtca 48071819  T
Q  581 aataaatgagtcaatttt 598  Q
     |||||||||||||||||    
T  48071820 gataaatgagtcaatttt 48071837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 481 - 600
Target Start/End: Original strand, 7041568 - 7041685
Alignment:
Q  481 aggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtca 580  Q
    ||||||||||||||||| |||||||||||||||||   ||||| || || |||||||||| |||||||||||||||||| ||||||||||||||||| ||    
T  7041568 aggttttttctacattatcctctcttgtttagaggt--atttatcctttcaagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaatgcca 7041665  T
Q  581 aataaatgagtcaatttttc 600  Q
    ||||||||||||||||||||    
T  7041666 aataaatgagtcaatttttc 7041685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 484 - 599
Target Start/End: Original strand, 6488922 - 6489036
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    |||||||||||||||||| | |||||||| ||||| |||||||||| |||||||||| || ||||||| ||||||| |||||||||||||||||||||||    
T  6488922 ttttttctacattaccctattttgtttagggggta-tttaccccttcaagatatcaaccagtcaaaatataatatacaaatgtaacattaaatgtcaaat 6489020  T
Q  584 aaatgagtcaattttt 599  Q
    ||||||||||||||||    
T  6489021 aaatgagtcaattttt 6489036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 489 - 603
Target Start/End: Complemental strand, 50938579 - 50938466
Alignment:
Q  489 tctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatg 588  Q
    |||| |||| ||||||||||||||| |||| ||||||| || |||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||    
T  50938579 tctagattatcctctcttgtttagaaggta-tttaccctttcaagatatcaaccaattaaaatgtaatatacaaatgtaacattaaatgtcaaataaatg 50938481  T
Q  589 agtcaatttttctat 603  Q
    |||||||||||||||    
T  50938480 agtcaatttttctat 50938466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 54410763 - 54410650
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaa-tgtaacattaaatgtcaaa 582  Q
    ||||||||| |||||||| |||||||||||||||| |||||||||  |||||||||| |||||||||||||||||| ||| |||||||||||||||||||    
T  54410763 ttttttctagattaccctatcttgtttagagggta-tttacccctaaaagatatcaaccaatcaaaatgtaatatacaaaatgtaacattaaatgtcaaa 54410665  T
Q  583 taaatgagtcaattt 597  Q
    |||||||||||||||    
T  54410664 taaatgagtcaattt 54410650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 494 - 603
Target Start/End: Complemental strand, 39132493 - 39132385
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtca 593  Q
    |||||||||||||||||| ||||  ||||||||||| || ||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  39132493 attaccctctcttgttta-agggatatttaccccttcaaaatatcaaccaatcaaaatgtaatatacaaatataacattaaatgtcaaataaatgagtca 39132395  T
Q  594 atttttctat 603  Q
    ||||||||||    
T  39132394 atttttctat 39132385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 482 - 599
Target Start/End: Original strand, 42876988 - 42877104
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    |||||||| |||||| |||| |||||||||| | ||| |||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  42876988 ggttttttatacattcccctatcttgtttagggagta-tttacctcttcaagatatcaatcaatcaaaatgtaatatacaaatgtaacattaaatgtcaa 42877086  T
Q  582 ataaatgagtcaattttt 599  Q
    |||||||||| |||||||    
T  42877087 ataaatgagtaaattttt 42877104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 494 - 599
Target Start/End: Complemental strand, 55136687 - 55136584
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtca 593  Q
    ||||||||||||||||||| ||||| |||| || ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  55136687 attaccctctcttgtttag-gggta-tttatccttttaagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaatgtcaaataaatgagtca 55136590  T
Q  594 attttt 599  Q
    ||||||    
T  55136589 attttt 55136584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 490 - 591
Target Start/End: Original strand, 22604719 - 22604820
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| ||||||||||||||||||||||||||||||||  | | ||||||||||||||||||||||||||| | | |||||||||||||||||||||||||    
T  22604719 ctacgttaccctctcttgtttagagggtaatttaccctctcatgatatcaatcaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatga 22604818  T
Q  590 gt 591  Q
    ||    
T  22604819 gt 22604820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 482 - 603
Target Start/End: Complemental strand, 22981466 - 22981347
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    |||||||||||||||||||| ||||||||||||| || |||||||||| |||||||||| ||||||||| |||||||| |||| ||| ||||||| ||||    
T  22981466 ggttttttctacattaccctgtcttgtttagaggata-tttaccccttcaagatatcaaccaatcaaaacgtaatatacaaatataatattaaatatcaa 22981368  T
Q  582 ataaatgagtcaatttttctat 603  Q
    ||||||||||| ||||||||||    
T  22981367 ataaatgagtc-atttttctat 22981347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 490 - 591
Target Start/End: Complemental strand, 30043696 - 30043595
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||||||||||||||||||||||||||||||||||||  | | |||||||| |||||||||||||||||| | | |||||||||||||||||||||||||    
T  30043696 ctacattaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatga 30043597  T
Q  590 gt 591  Q
    ||    
T  30043596 gt 30043595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 55135197 - 55135308
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    |||||||||||||| ||||||||||||||||| || |||||||||  |||||||||| |||||| ||||||||| | |||||||||||||||||||||||    
T  55135197 ttttttctacattatcctctcttgtttagaggata-tttacccctaaaagatatcaaccaatcataatgtaataca-aaatgtaacattaaatgtcaaat 55135294  T
Q  584 aaatgagtcaattt 597  Q
    ||||||||||||||    
T  55135295 aaatgagtcaattt 55135308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 481 - 599
Target Start/End: Complemental strand, 43359633 - 43359515
Alignment:
Q  481 aggttttttctacattaccctctcttgtttagagggtaatttacc-cctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtc 579  Q
    |||||||||||| ||||| || ||||| |||| || || |||||| |||| ||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  43359633 aggttttttctatattacactatcttgattaggggata-tttacctccttcaagatattaatcaatcaaaatgtaatatacaaatgtaacattaaatgtc 43359535  T
Q  580 aaataaatgagtcaattttt 599  Q
    ||||||||||||||||||||    
T  43359534 aaataaatgagtcaattttt 43359515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 482 - 599
Target Start/End: Original strand, 36465585 - 36465701
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||  || || ||||||| ||||||||||| |||||| |||||||| |||||| |||||    
T  36465585 ggttttttctagattaccctctcttgtttagagggta-tttaccttttcaacatatcaaccaatcaaaatgcaatatagaaatgtaatattaaaggtcaa 36465683  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||| ||||    
T  36465684 ataaatgagtcaaatttt 36465701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 490 - 591
Target Start/End: Original strand, 40906003 - 40906104
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||||||||||||||||||||||||||||||||||||  |   ||||| || |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  40906003 ctacattaccctctcttgtttagagggtaatttaccctctcgtgatattaaccaatcaaaatgtaatatacaaaggtaacattaaatgtcaaataaatga 40906102  T
Q  590 gt 591  Q
    ||    
T  40906103 gt 40906104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 490 - 591
Target Start/End: Complemental strand, 44843403 - 44843302
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| ||||||||||||||||||||||||||||||||  | | |||||||| |||||||||||||||||| | | |||||||||||||||||||||||||    
T  44843403 ctacgttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatga 44843304  T
Q  590 gt 591  Q
    ||    
T  44843303 gt 44843302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 495 - 591
Target Start/End: Original strand, 11121085 - 11121181
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||||||||||||||||||||||||||||||  | | |||||||| |||||||||||||||||| | | |||||||||||||||||||||||||||    
T  11121085 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatgagt 11121181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 495 - 591
Target Start/End: Complemental strand, 27239262 - 27239166
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    |||||||| |||||||||||||||||||||||  | | |||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||    
T  27239262 ttaccctcacttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacatatgtaacattaaatgtcaaataaatgagt 27239166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 495 - 591
Target Start/End: Original strand, 37785292 - 37785388
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||||||||||||||||||||||||||||||  | | |||||||| |||||||||||||||||| | | |||||||||||||||||||||||||||    
T  37785292 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatgagt 37785388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 531 - 603
Target Start/End: Original strand, 43357897 - 43357969
Alignment:
Q  531 aagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaatttttctat 603  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  43357897 aagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaatgtcaaataaatgagtcaatttttctat 43357969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 519 - 603
Target Start/End: Complemental strand, 43863204 - 43863120
Alignment:
Q  519 atttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaatttttctat 603  Q
    |||||||| ||||||||||||| ||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  43863204 atttacccttttaagatatcaaccaatcaaaatgcaatatacaaatgtaacattgaatgtcaaataaatgagtcaatttttctat 43863120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 482 - 581
Target Start/End: Complemental strand, 42167616 - 42167518
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    |||||||||||| |||||||||||||||||   |||| |||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  42167616 ggttttttctacgttaccctctcttgtttatgaggta-tttaccccttcaagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaatgtcaa 42167518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 489 - 591
Target Start/End: Original strand, 41101511 - 41101613
Alignment:
Q  489 tctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatg 588  Q
    ||||| |||||||||||| |||||||| |||||||||   | | ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  41101511 tctacgttaccctctcttatttagaggataatttaccttctcatgatatcaatcaatcaaaatgtaatatacatatgtaacattaaatgtcaaataaatg 41101610  T
Q  589 agt 591  Q
    |||    
T  41101611 agt 41101613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 489 - 603
Target Start/End: Original strand, 42163299 - 42163412
Alignment:
Q  489 tctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatg 588  Q
    ||||||||| ||||||||||| || | ||| ||||||  || |||||||||| ||||||||||| |||||| |||| |||||||||||||||||||||||    
T  42163299 tctacattatcctctcttgttcagggagta-tttaccatttcaagatatcaaccaatcaaaatgcaatatacaaatttaacattaaatgtcaaataaatg 42163397  T
Q  589 agtcaatttttctat 603  Q
    |||||||||||||||    
T  42163398 agtcaatttttctat 42163412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 482 - 599
Target Start/End: Original strand, 43860468 - 43860583
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatata-aatgtaacattaaatgtca 580  Q
    |||||||||||  ||||||||||||||||||  |||| ||||||||||||||||||||| |||||||||||| ||||| | ||||||||| |||||||||    
T  43860468 ggttttttctaacttaccctctcttgtttaggaggta-tttacccctttaagatatcaaccaatcaaaatgt-atatacagaatgtaaca-taaatgtca 43860564  T
Q  581 aataaatgagtcaattttt 599  Q
    |||||||||||||||||||    
T  43860565 aataaatgagtcaattttt 43860583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 490 - 591
Target Start/End: Complemental strand, 15084776 - 15084675
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| ||| ||||||||||||||||||||||||||||  | | |||||||| |||||||||||||||||| | | |||||||||||||||||||||||||    
T  15084776 ctacgttatcctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatga 15084677  T
Q  590 gt 591  Q
    ||    
T  15084676 gt 15084675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 495 - 591
Target Start/End: Original strand, 13213299 - 13213395
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||||||||||||||||||||||||||||||  | | |||||||| |||||||||||||||||| | | ||| |||||||||||||||||||||||    
T  13213299 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacataggtagcattaaatgtcaaataaatgagt 13213395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 495 - 591
Target Start/End: Original strand, 53845139 - 53845235
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    |||||||||||| |||||||||||||||||||  | | |||||||| |||||||||||||||||| | | |||||||||||||||||||||||||||    
T  53845139 ttaccctctcttatttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatgagt 53845235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 482 - 597
Target Start/End: Original strand, 31999815 - 31999934
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaat--atat---aaatgtaacattaaat 576  Q
    |||||||||||||||||| ||||||||||||| | || |||||||||| |||||||||| |||||||||||||||  ||||   ||||||||||||||||    
T  31999815 ggttttttctacattaccgtctcttgtttagatgata-tttaccccttcaagatatcaaccaatcaaaatgtaattaatatacaaaatgtaacattaaat 31999913  T
Q  577 gtcaaataaatgagtcaattt 597  Q
     ||||||||||||| ||||||    
T  31999914 atcaaataaatgagacaattt 31999934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 494 - 603
Target Start/End: Complemental strand, 32001282 - 32001173
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtca 593  Q
    ||||||||||||| ||||| ||||| ||||||| || || ||||||| |||||||||||||||||| |||| |||||||||||||||||||||||| |||    
T  32001282 attaccctctcttatttagggggta-tttaccctttcaaaatatcaaccaatcaaaatgtaatatacaaatttaacattaaatgtcaaataaatgattca 32001184  T
Q  594 a-tttttctat 603  Q
    | |||||||||    
T  32001183 actttttctat 32001173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 489 - 599
Target Start/End: Original strand, 54409366 - 54409475
Alignment:
Q  489 tctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatg 588  Q
    |||| |||||||| |||||||||| ||||| ||||||  || ||||||| || |||||||||||||||||| |||||||||||||||| |||||||||||    
T  54409366 tctagattaccctatcttgtttagggggta-tttaccttttcaagatataaaccaatcaaaatgtaatatacaaatgtaacattaaatatcaaataaatg 54409464  T
Q  589 agtcaattttt 599  Q
    ||| |||||||    
T  54409465 agttaattttt 54409475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 490 - 591
Target Start/End: Complemental strand, 6177416 - 6177315
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| |||| |||||||||||||||||||||||||||  | | ||||||||  ||||||||||||||||||| | ||| |||||||||||||||||||||    
T  6177416 ctacgttacgctctcttgtttagagggtaatttaccctctcatgatatcaactaatcaaaatgtaatatatataggtaccattaaatgtcaaataaatga 6177317  T
Q  590 gt 591  Q
    ||    
T  6177316 gt 6177315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 490 - 591
Target Start/End: Complemental strand, 8852355 - 8852254
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| ||||||||||||||||||||| |||||||| |  | | |||||||| |||||||||||||||||| | | |||||||||||||||||||||||||    
T  8852355 ctacgttaccctctcttgtttagaggataatttactctctcatgatatcaaccaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatga 8852256  T
Q  590 gt 591  Q
    ||    
T  8852255 gt 8852254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 490 - 591
Target Start/End: Complemental strand, 37220311 - 37220210
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| ||||||||||||||||||||||||||||||    | | |||||||| |||||||||||||||||||| | ||||||||| |||||||||||||||    
T  37220311 ctacgttaccctctcttgtttagagggtaatttactatctcatgatatcaaccaatcaaaatgtaatatatataggtaacattagatgtcaaataaatga 37220212  T
Q  590 gt 591  Q
    ||    
T  37220211 gt 37220210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 499 - 591
Target Start/End: Original strand, 27320869 - 27320961
Alignment:
Q  499 cctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||||||||||||||||||||||||||  | | |||||||| |||||||||||||||||| | |  ||||||||||||||||||||||||||    
T  27320869 cctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacatagataacattaaatgtcaaataaatgagt 27320961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 492 - 576
Target Start/End: Original strand, 39129068 - 39129150
Alignment:
Q  492 acattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaat 576  Q
    |||||||||| |||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  39129068 acattaccctatcttgtttagagggta-tttaccc-tttaagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaat 39129150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 481 - 599
Target Start/End: Complemental strand, 13243635 - 13243519
Alignment:
Q  481 aggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtca 580  Q
    |||||||||||| ||||||||||||| ||||||||||| |||||||  | | |||||||| ||||||||||||||||||||   | |||||||||||||     
T  13243635 aggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatatattggcaacattaaatgtc- 13243537  T
Q  581 aataaatgagtcaattttt 599  Q
     |||||||||| |||||||    
T  13243536 -ataaatgagttaattttt 13243519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 488 - 591
Target Start/End: Complemental strand, 47913162 - 47913059
Alignment:
Q  488 ttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaat 587  Q
    |||||| |||||||||||| ||||||||||||||||| |  | |||||||||| |||||||||| ||||||| | | |||||||||| ||||||||||||    
T  47913162 ttctactttaccctctcttttttagagggtaatttactctctcaagatatcaaccaatcaaaatataatatacataggtaacattaattgtcaaataaat 47913063  T
Q  588 gagt 591  Q
    ||||    
T  47913062 gagt 47913059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 23022086 - 23021971
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| ||||||||||||| ||||||||||| |||||||  | | |||||||| |||||||||||||||||| |   | |||||||||||||      
T  23022086 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtc-- 23021989  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  23021988 ataaatgagtcaattttt 23021971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 482 - 599
Target Start/End: Original strand, 52745654 - 52745769
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| || |||||||||| ||||||||||||  |||||  ||| ||||||||||||||||||||||||||| |   | |||||||||||||      
T  52745654 ggttttttctagatcaccctctcttatttagagggtaaaataccctcttatgatatcaatcaatcaaaatgtaatatacattggcaacattaaatgtc-- 52745751  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  52745752 ataaatgagtcaattttt 52745769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 490 - 591
Target Start/End: Complemental strand, 50548699 - 50548598
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| ||||||||||||||||||| ||||||||| |   | | |||||||| |||||||||||||||||| | | |||||||||||||||||||||||||    
T  50548699 ctacgttaccctctcttgtttagatggtaatttatcatctcatgatatcaaccaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatga 50548600  T
Q  590 gt 591  Q
    ||    
T  50548599 gt 50548598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 531 - 603
Target Start/End: Original strand, 41888606 - 41888678
Alignment:
Q  531 aagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaatttttctat 603  Q
    |||||||||| |||| ||||||||||||| |||||||||||||||||| || |||||||||||||||||||||    
T  41888606 aagatatcaaccaattaaaatgtaatatacaaatgtaacattaaatgttaattaaatgagtcaatttttctat 41888678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 481 - 599
Target Start/End: Complemental strand, 2220038 - 2219922
Alignment:
Q  481 aggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtca 580  Q
    ||||||||| || ||||||||||||| ||||||| ||| |||||||  | | |||||||| |||||||||||||||||| |   |||||||||||||||     
T  2220038 aggttttttttagattaccctctcttatttagagagtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggtaacattaaatgtc- 2219940  T
Q  581 aataaatgagtcaattttt 599  Q
     ||||||||||||||||||    
T  2219939 -ataaatgagtcaattttt 2219922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 531 - 598
Target Start/End: Complemental strand, 48073951 - 48073884
Alignment:
Q  531 aagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaatttt 598  Q
    |||||||||| |||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  48073951 aagatatcaaccaattaaaatgtaatatacaaatgtaacattaaatatcaaataaatgagtcaatttt 48073884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 11123706 - 11123591
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| ||||||||||||| ||||||||||| |||||||  | | |||||||| ||||||||||||||| || |   | |||||||||||||      
T  11123706 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatctagattggcaacattaaatgtc-- 11123609  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  11123608 ataaatgagtcaattttt 11123591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 489 - 591
Target Start/End: Original strand, 27126046 - 27126148
Alignment:
Q  489 tctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatg 588  Q
    ||||| |||| |||||||||||||||| |||||||| |  ||| |||||||| |||| ||||||||||||| | |  |||||||||||||||||||||||    
T  27126046 tctacgttactctctcttgtttagaggataatttactctcttatgatatcaaccaattaaaatgtaatatacatagataacattaaatgtcaaataaatg 27126145  T
Q  589 agt 591  Q
    |||    
T  27126146 agt 27126148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 490 - 591
Target Start/End: Original strand, 2217879 - 2217980
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    ||||||||| ||||||| |||||| ||||||||||||  | | |||||||| |||||||||||||||||| | |  |||||||||||||||||| |||||    
T  2217879 ctacattactctctcttatttagaaggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacatagataacattaaatgtcaaatgaatga 2217978  T
Q  590 gt 591  Q
    ||    
T  2217979 gt 2217980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 495 - 580
Target Start/End: Complemental strand, 4233248 - 4233163
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtca 580  Q
    ||||||||||||||||||||||||||||||||  | |  ||||||| |||||||||||||||||| | | ||||||||||||||||    
T  4233248 ttaccctctcttgtttagagggtaatttaccctctcataatatcaaccaatcaaaatgtaatatacataggtaacattaaatgtca 4233163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 490 - 591
Target Start/End: Original strand, 38696699 - 38696799
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| ||| ||||||||||||||||| ||||| |||| || | ||||| ||| ||||||||||||||||| | | |||||||||||||||||||||||||    
T  38696699 ctacgttatcctctcttgtttagaggataatt-accctttcatgatataaattaatcaaaatgtaatatacataagtaacattaaatgtcaaataaatga 38696797  T
Q  590 gt 591  Q
    ||    
T  38696798 gt 38696799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 490 - 591
Target Start/End: Original strand, 45169823 - 45169924
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| |||||||||||| ||||||||||||||||| |  | |  |||||||  ||||||||||||||||| | | |||||||||||||||||||||||||    
T  45169823 ctacgttaccctctcttttttagagggtaatttactctctcataatatcaactaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatga 45169922  T
Q  590 gt 591  Q
    ||    
T  45169923 gt 45169924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 484 - 599
Target Start/End: Original strand, 47910953 - 47911066
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    ||||||||| |||| |||||||| |||||||||||||||||||  | | |||||||| |||||||||||||||||| |   | | |||||||||||  ||    
T  47910953 ttttttctagattatcctctcttatttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcagcattaaatgtc--at 47911050  T
Q  584 aaatgagtcaattttt 599  Q
    ||||||||||||||||    
T  47911051 aaatgagtcaattttt 47911066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 484 - 599
Target Start/End: Original strand, 50546473 - 50546586
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    ||||||||| ||||||||||||| |||| |||||| |||||||  | | |||||||| |||||||||||||||||| |   | |||||||||||||  ||    
T  50546473 ttttttctagattaccctctcttatttatagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtc--at 50546570  T
Q  584 aaatgagtcaattttt 599  Q
    ||||||||||||||||    
T  50546571 aaatgagtcaattttt 50546586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 482 - 599
Target Start/End: Original strand, 31311666 - 31311780
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| ||||||||||||||||||||| || ||||||||  | | ||||| || ||||||||||||||||||||     |||||||||||||      
T  31311666 ggttttttctagattaccctctcttgtttagagcgt-atttaccctctcatgatataaaccaatcaaaatgtaatatatattgacaacattaaatgtc-- 31311762  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  31311763 ataaatgagtcaattttt 31311780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 482 - 599
Target Start/End: Original strand, 37178242 - 37178356
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| ||||||||||||||||||||| || ||| ||||||| | |||||||| |||||||||||||||||| |     |||||||||||||      
T  37178242 ggttttttctaaattaccctctcttgtttagagcgt-attaaccccttcatgatatcaaccaatcaaaatgtaatatacattgacaacattaaatgtc-- 37178338  T
Q  582 ataaatgagtcaattttt 599  Q
    |||||| |||||||||||    
T  37178339 ataaataagtcaattttt 37178356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 533 - 591
Target Start/End: Original strand, 38235390 - 38235448
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    |||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||    
T  38235390 gatatcaaccaatcaaaatgtaatatacatatgtaacattaaatgtcaaataaatgagt 38235448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 40908550 - 40908435
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    |||||||| || ||||||||||||| ||||||||||| |||||||  | | |||||||| |||||||||||||||||| |   | |||||||||| ||      
T  40908550 ggttttttttagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatatc-- 40908453  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  40908452 ataaatgagtcaattttt 40908435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 489 - 591
Target Start/End: Original strand, 43338222 - 43338323
Alignment:
Q  489 tctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatg 588  Q
    ||||||||||||  ||||||||||||||||||| ||||  | | |||||||| |||||||||||||||||| | | |||||||||||| | |||||||||    
T  43338222 tctacattacccaatcttgtttagagggtaatt-accctctcatgatatcaaccaatcaaaatgtaatatacataagtaacattaaattttaaataaatg 43338320  T
Q  589 agt 591  Q
    |||    
T  43338321 agt 43338323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 53583765 - 53583650
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| ||||||||||||| ||||||||||| |||| ||  | | |||||||| |||||||||||||||||| |   | |||||||||||||      
T  53583765 ggttttttctagattaccctctcttatttagagggtattttatcctctcatgatatcaaccaatcaaaatgtaatatacattagcaacattaaatgtc-- 53583668  T
Q  582 ataaatgagtcaattttt 599  Q
    ||| ||||||||||||||    
T  53583667 atatatgagtcaattttt 53583650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 490 - 591
Target Start/End: Original strand, 23019686 - 23019786
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| |||| ||||||| |||||||||||||||||||  | | |||||||| ||||| |||||||||||| | | |||||||| ||||||||||||||||    
T  23019686 ctacgttacactctcttatttagagggtaatttaccctctcatgatatcaaccaatcgaaatgtaatatacataggtaacatt-aatgtcaaataaatga 23019784  T
Q  590 gt 591  Q
    ||    
T  23019785 gt 23019786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 482 - 559
Target Start/End: Original strand, 27330113 - 27330190
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatata 559  Q
    ||||||||||| ||||||||||||| ||||||||||| |||||||  | | |||||||| ||||||||||||||||||    
T  27330113 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatata 27330190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 490 - 591
Target Start/End: Original strand, 40423507 - 40423606
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| ||||||||||||||||||| ||||||| ||| ||  | ||||| || |||||||||||||||||| | | |||||||||||||||||||||||||    
T  40423507 ctacgttaccctctcttgtttagaaggtaatt-acctctc-atgatataaaccaatcaaaatgtaatatacataagtaacattaaatgtcaaataaatga 40423604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 488 - 599
Target Start/End: Original strand, 3890777 - 3890885
Alignment:
Q  488 ttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaat 587  Q
    ||||| |||||||| |||||||||||| ||| |||||||||| | |||||||| ||||||||||||||||||||     |||||||||||||  ||||||    
T  3890777 ttctagattaccctatcttgtttagagagta-tttaccccttcatgatatcaaccaatcaaaatgtaatatatattgacaacattaaatgtc--ataaat 3890873  T
Q  588 gagtcaattttt 599  Q
    || |||||||||    
T  3890874 gactcaattttt 3890885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 531 - 591
Target Start/End: Original strand, 16463798 - 16463858
Alignment:
Q  531 aagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    |||||||||| |||||||||||||||||| | | |||||||||||||||||||||||||||    
T  16463798 aagatatcaaccaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatgagt 16463858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 503 - 591
Target Start/End: Complemental strand, 41698283 - 41698195
Alignment:
Q  503 tcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||||||||| ||||| ||| ||  | | |||||||| |||||||||||||||||||| | |||||||||||| ||||||||||||||    
T  41698283 tcttgtttagaaggtaacttatcctctcatgatatcaaccaatcaaaatgtaatatatataggtaacattaaatatcaaataaatgagt 41698195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 481 - 599
Target Start/End: Complemental strand, 29894819 - 29894703
Alignment:
Q  481 aggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtca 580  Q
    |||||||||||| |||| |||||||| ||||||| ||| |||||||  | | |||||||| |||||||||||||||||| |   | |||||||||||||     
T  29894819 aggttttttctagattatcctctcttatttagagagtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtc- 29894721  T
Q  581 aataaatgagtcaattttt 599  Q
     |||||||||||| |||||    
T  29894720 -ataaatgagtcatttttt 29894703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 533 - 591
Target Start/End: Complemental strand, 37182441 - 37182385
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||    
T  37182441 gatatcaatcaatcaaaatgtaatatat--aggtaacattaaatgtcaaataaatgagt 37182385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 561 - 603
Target Start/End: Complemental strand, 2229444 - 2229402
Alignment:
Q  561 aaatgtaacattaaatgtcaaataaatgagtcaatttttctat 603  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  2229444 aaatgtaacattaaatgtcaaataaatgagtcaatttttctat 2229402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 533 - 599
Target Start/End: Complemental strand, 22429039 - 22428973
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaattttt 599  Q
    |||||||| |||||||||||||||||| | | | ||||||||||||||||||||||| |||||||||    
T  22429039 gatatcaaccaatcaaaatgtaatatacataggcaacattaaatgtcaaataaatgaatcaattttt 22428973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 478 - 580
Target Start/End: Original strand, 37218163 - 37218265
Alignment:
Q  478 tgtaggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatg 577  Q
    |||| ||||||| || ||||||||||||| ||||||||||| |||||||  | | |||||||| |||||||||||||||||| |   | |||||||||||    
T  37218163 tgtatgttttttttagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatg 37218262  T
Q  578 tca 580  Q
    |||    
T  37218263 tca 37218265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 501 - 591
Target Start/End: Original strand, 42825874 - 42825964
Alignment:
Q  501 tctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||||||||||||||||||||||||  | | |||||||| || ||||||||||||||| | | |||||||||||  ||||||||| ||||    
T  42825874 tctcttgtttagagggtaatttaccctctcatgatatcaaccagtcaaaatgtaatatacataggtaacattaaacatcaaataaaagagt 42825964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 542 - 591
Target Start/End: Original strand, 16008676 - 16008725
Alignment:
Q  542 caatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||    
T  16008676 caatcaaaatgtaatatatataggtaacattaaatgtcaaataaatgagt 16008725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 490 - 591
Target Start/End: Original strand, 18410060 - 18410161
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| |||||||||||| |||| ||| |||||||  |  | | |||||||| |||||||||||||||||| | | |||| ||||||||||||||||||||    
T  18410060 ctacgttaccctctcttatttaaaggataatttattctctcatgatatcaaccaatcaaaatgtaatatacataggtaatattaaatgtcaaataaatga 18410159  T
Q  590 gt 591  Q
    ||    
T  18410160 gt 18410161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 490 - 591
Target Start/End: Complemental strand, 51723027 - 51722927
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| ||||||| |||||||||||| |||||| ||||  ||| ||||| || |||| ||||||||||||| | | |||| ||||||||||||||||||||    
T  51723027 ctacgttaccctttcttgtttagagagtaatt-accctcttatgatataaaccaattaaaatgtaatatacataagtaatattaaatgtcaaataaatga 51722929  T
Q  590 gt 591  Q
    ||    
T  51722928 gt 51722927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 495 - 591
Target Start/End: Complemental strand, 3892883 - 3892788
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||||||||||||||||||||||||| || |  | | ||||||||||||||||||| ||||||| | |   |||| ||||||||||||||||||||    
T  3892883 ttaccctctcttgtttagagggtaatt-acactctcatgatatcaatcaatcaaaatataatatacatagaaaacactaaatgtcaaataaatgagt 3892788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 480 - 599
Target Start/End: Original strand, 8849750 - 8849867
Alignment:
Q  480 taggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtc 579  Q
    |||||||||||||  ||||||| |||| ||||||||||| ||||||   | | |||||||| |||||||||||||||||| |   | ||||||||||| |    
T  8849750 taggttttttctaggttaccctatcttatttagagggtattttaccatctcatgatatcaaccaatcaaaatgtaatatagattggcaacattaaatgcc 8849849  T
Q  580 aaataaatgagtcaattttt 599  Q
      ||||||||||||||||||    
T  8849850 --ataaatgagtcaattttt 8849867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 484 - 599
Target Start/End: Original strand, 30361644 - 30361756
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    ||||||||| |||||||| ||||||||||| ||| ||||| ||||| | |||||||| |||| |||||||||||||||     ||| |||||||||  ||    
T  30361644 ttttttctagattaccctatcttgtttagaaggt-atttatcccttaatgatatcaaccaattaaaatgtaatatatattgacaactttaaatgtc--at 30361740  T
Q  584 aaatgagtcaattttt 599  Q
    ||||||||||||||||    
T  30361741 aaatgagtcaattttt 30361756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 484 - 599
Target Start/End: Original strand, 30438267 - 30438380
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    |||||| || ||||||||||||| ||||||||||| |||||||  | | ||||||||  ||| ||||||||||||| |   |||| ||||||||||  ||    
T  30438267 ttttttttagattaccctctcttatttagagggtattttaccctctcatgatatcaacaaattaaaatgtaatatacattggtaatattaaatgtc--at 30438364  T
Q  584 aaatgagtcaattttt 599  Q
    ||||||||||||||||    
T  30438365 aaatgagtcaattttt 30438380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 484 - 599
Target Start/End: Complemental strand, 37787322 - 37787209
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    |||||| || ||||||||||||| ||||||||||| |||||||  ||| ||||| || |||||||||||||||||| |     |||||||||| ||  ||    
T  37787322 ttttttttagattaccctctcttatttagagggtattttaccctcttatgatataaaccaatcaaaatgtaatatacattgacaacattaaatatc--at 37787225  T
Q  584 aaatgagtcaattttt 599  Q
    ||||||||||||||||    
T  37787224 aaatgagtcaattttt 37787209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 484 - 559
Target Start/End: Original strand, 44841226 - 44841301
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatata 559  Q
    ||||||||| |||||| |||||| ||||||||||| |||||||  | | |||||||| ||||||||||||||||||    
T  44841226 ttttttctagattaccgtctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatata 44841301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 481 - 559
Target Start/End: Original strand, 15082708 - 15082786
Alignment:
Q  481 aggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatata 559  Q
    |||||||||||| |||| |||||||| |||||| |||| |||||||  | | ||||| |||||||||||||||||||||    
T  15082708 aggttttttctagattatcctctcttatttagaaggtattttaccctctcatgatataaatcaatcaaaatgtaatata 15082786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 22606906 - 22606791
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    |||||||| || |||| |||||||| ||||||||||| |||||||  |||  ||||||| |||||||||| ||||||| |     |||||||||||||      
T  22606906 ggttttttttagattatcctctcttatttagagggtattttaccctcttattatatcaaccaatcaaaatataatatacattgacaacattaaatgtc-- 22606809  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  22606808 ataaatgagtcaattttt 22606791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 41103785 - 41103670
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| || ||| |||||| ||||||||||| |||||||  | | ||||||||  ||| ||||||||||||| |   | |||||||||||||      
T  41103785 ggttttttctagatcaccatctcttatttagagggtattttaccctctcatgatatcaacaaattaaaatgtaatatacattggcaacattaaatgtc-- 41103688  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  41103687 ataaatgagtcaattttt 41103670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 42828049 - 42827935
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| |||||| ||| ||||||||||||| ||||||||  | | ||||||||||||||||| | ||||||| |     |||||||||||||      
T  42828049 ggttttttctagattaccatcttttgtttagagggt-atttaccctctcatgatatcaatcaatcaaactataatatacattgacaacattaaatgtc-- 42827953  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  42827952 ataaatgagtcaattttt 42827935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 487 - 600
Target Start/End: Original strand, 50535960 - 50536070
Alignment:
Q  487 tttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaa 586  Q
    |||||| |||||||||||||||||| ||||| ||||||||  | | |||||||| ||||||||||||||||||       |||||||||||||  |||||    
T  50535960 tttctaaattaccctctcttgtttatagggt-atttaccctctcatgatatcaaccaatcaaaatgtaatataccttgacaacattaaatgtc--ataaa 50536056  T
Q  587 tgagtcaatttttc 600  Q
    ||||||||||||||    
T  50536057 tgagtcaatttttc 50536070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 599
Target Start/End: Original strand, 4230848 - 4230961
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    ||||||||| ||||||||||||| ||||||||||| |||||||  | | ||||||||  |||||| |||||||||| |     ||||||||||||   ||    
T  4230848 ttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaactaatcaacatgtaatatacattgacaacattaaatgt--tat 4230945  T
Q  584 aaatgagtcaattttt 599  Q
    ||||||||||||||||    
T  4230946 aaatgagtcaattttt 4230961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 535 - 599
Target Start/End: Complemental strand, 22732755 - 22732691
Alignment:
Q  535 tatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaattttt 599  Q
    |||||| ||||||||||||||||||   || ||| ||||||||| ||||||||||||||||||||    
T  22732755 tatcaaccaatcaaaatgtaatatacgtatataatattaaatgttaaataaatgagtcaattttt 22732691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 599
Target Start/End: Complemental strand, 38698867 - 38698755
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    |||||| || |||||||||||||||||||||| | ||||||||  | | |||||||| |||||||||||||||||| |     |||||||||| ||  ||    
T  38698867 ttttttttagattaccctctcttgtttagaggat-atttaccctctcatgatatcaaccaatcaaaatgtaatatacattgacaacattaaatatc--at 38698771  T
Q  584 aaatgagtcaattttt 599  Q
    ||||||||||||||||    
T  38698770 aaatgagtcaattttt 38698755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 483 - 559
Target Start/End: Original strand, 45051738 - 45051814
Alignment:
Q  483 gttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatata 559  Q
    |||||||||| |||| |||||||| |||||||| || |||||||  | | |||||||| ||||||||||||||||||    
T  45051738 gttttttctagattatcctctcttatttagaggatattttaccctctcatgatatcaaccaatcaaaatgtaatata 45051814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 534 - 602
Target Start/End: Complemental strand, 53778469 - 53778401
Alignment:
Q  534 atatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaatttttcta 602  Q
    ||||||| |||||||||||||||||| | |   || |||||||||||||||||||| ||||||||||||    
T  53778469 atatcaaccaatcaaaatgtaatatacatagacaatattaaatgtcaaataaatgaatcaatttttcta 53778401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 484 - 599
Target Start/End: Original strand, 10825749 - 10825863
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    |||||| || ||||||||||||||||||| ||||| ||| |||  | | ||||| || |||| ||||||||||||| |     |||||||||| ||||||    
T  10825749 ttttttttagattaccctctcttgtttagggggta-tttgccctctcatgatattaaccaatgaaaatgtaatatacattgacaacattaaatatcaaat 10825847  T
Q  584 aaatgagtcaattttt 599  Q
    ||||||||||||||||    
T  10825848 aaatgagtcaattttt 10825863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 481 - 599
Target Start/End: Complemental strand, 18763975 - 18763860
Alignment:
Q  481 aggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtca 580  Q
    |||||||||||| |||||| |||||| |||||||||| ||||| ||  | | |||||||| ||||||| |||||||||| |     |||||||||||||     
T  18763975 aggttttttctagattaccttctcttatttagagggt-atttatcctctcatgatatcaaccaatcaagatgtaatatacattgacaacattaaatgtc- 18763878  T
Q  581 aataaatgagtcaattttt 599  Q
     ||||||||||||||||||    
T  18763877 -ataaatgagtcaattttt 18763860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 484 - 559
Target Start/End: Complemental strand, 27128228 - 27128153
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatata 559  Q
    ||||||||| |||||||| |||| ||||||||||| ||||| |  | | |||||||| ||||||||||||||||||    
T  27128228 ttttttctagattaccctatcttatttagagggtattttactctatcatgatatcaaccaatcaaaatgtaatata 27128153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 480 - 559
Target Start/End: Original strand, 41695912 - 41695991
Alignment:
Q  480 taggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatata 559  Q
    ||||||||||||| |||||||| |||| |||||||| || ||||| |  | | |||||||| ||||||||||||||||||    
T  41695912 taggttttttctagattaccctatcttatttagaggttattttactctctcatgatatcaaccaatcaaaatgtaatata 41695991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 483 - 561
Target Start/End: Original strand, 22731373 - 22731451
Alignment:
Q  483 gttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatata 561  Q
    ||||||| || ||||| |||||||| |||  |||| ||||||||| | | |||||||| ||||||||||||||||||||    
T  22731373 gttttttttagattactctctcttgattaaggggtgatttaccccctcatgatatcaaccaatcaaaatgtaatatata 22731451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 531 - 585
Target Start/End: Complemental strand, 36471851 - 36471797
Alignment:
Q  531 aagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataa 585  Q
    |||||||||| ||||||||||| |||||| ||||||||||||| |||| ||||||    
T  36471851 aagatatcaaccaatcaaaatgcaatatacaaatgtaacattacatgttaaataa 36471797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 494 - 559
Target Start/End: Complemental strand, 45172763 - 45172698
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatata 559  Q
    ||||||||||||| ||||||||||| ||||| |  | | |||||||| ||||||||||||||||||    
T  45172763 attaccctctcttatttagagggtattttactctctcatgatatcaaccaatcaaaatgtaatata 45172698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 482 - 599
Target Start/End: Original strand, 51720860 - 51720975
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaat--gtaacattaaatgtc 579  Q
    ||||||||||| ||||||||||||| ||||||| || ||||||||  | | || ||||| |||||||||||||| ||||| ||    |||||||||||||    
T  51720860 ggttttttctagattaccctctcttatttagagagt-atttaccctctcatgaaatcaaccaatcaaaatgtaa-atatacattgacaacattaaatgtc 51720957  T
Q  580 aaataaatgagtcaattttt 599  Q
      ||||||||||||||||||    
T  51720958 --ataaatgagtcaattttt 51720975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 600
Target Start/End: Complemental strand, 55219940 - 55219827
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    ||||||||| ||||||||||||| |||||||||| ||||||||  | | |||||||| |||| |||| |||||||| |     ||| |||||||||  ||    
T  55219940 ttttttctagattaccctctcttatttagagggt-atttaccctctcatgatatcaaccaattaaaaagtaatatacattgacaactttaaatgtc--at 55219844  T
Q  584 aaatgagtcaatttttc 600  Q
    |||||||||||||||||    
T  55219843 aaatgagtcaatttttc 55219827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 490 - 526
Target Start/End: Original strand, 37785261 - 37785297
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttaccc 526  Q
    |||| ||||||||||||||||||||||||||||||||    
T  37785261 ctacgttaccctctcttgtttagagggtaatttaccc 37785297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 481 - 599
Target Start/End: Complemental strand, 50610659 - 50610543
Alignment:
Q  481 aggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtca 580  Q
    ||||||||| || ||||| |||| || ||||||||||| |||| ||  | | |||||||| |||||||||||||||||| |     || ||||||||||     
T  50610659 aggttttttttagattactctcttttatttagagggtattttatcctctaatgatatcaaccaatcaaaatgtaatatacattgacaatattaaatgtc- 50610561  T
Q  581 aataaatgagtcaattttt 599  Q
     ||||||||||||||||||    
T  50610560 -ataaatgagtcaattttt 50610543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 484 - 559
Target Start/End: Complemental strand, 55413232 - 55413158
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatata 559  Q
    ||||||||| |||||||| |||||||||  ||||| |||| ||  ||| |||||||| ||||||||||||||||||    
T  55413232 ttttttctagattaccctttcttgtttaaggggta-tttatcctcttatgatatcaaccaatcaaaatgtaatata 55413158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 489 - 555
Target Start/End: Complemental strand, 2229502 - 2229437
Alignment:
Q  489 tctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaa 555  Q
    |||| |||| ||| ||||||||||||| || |||| || ||||||||||||| ||||||||||||||    
T  2229502 tctagattatcctatcttgtttagaggata-tttatccttttaagatatcaaccaatcaaaatgtaa 2229437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 533 - 591
Target Start/End: Complemental strand, 30440448 - 30440390
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    |||||||| |||||||||||||||||| | |  ||| |||||||| |||||||||||||    
T  30440448 gatatcaaccaatcaaaatgtaatatacatagataatattaaatgacaaataaatgagt 30440390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 574 - 603
Target Start/End: Complemental strand, 42880214 - 42880185
Alignment:
Q  574 aatgtcaaataaatgagtcaatttttctat 603  Q
    ||||||||||||||||||||||||||||||    
T  42880214 aatgtcaaataaatgagtcaatttttctat 42880185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 491 - 599
Target Start/End: Complemental strand, 10827844 - 10827737
Alignment:
Q  491 tacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgag 590  Q
    |||||||||||||||| ||||  |||||||| || |  | | |||||||| |||| ||||||||||||||  |   ||||||||||||| ||||||| |     
T  10827844 tacattaccctctcttatttaaggggtaatt-actctctcatgatatcaaccaattaaaatgtaatatatgtagacaacattaaatgtcgaataaataaa 10827746  T
Q  591 tcaattttt 599  Q
    |||||||||    
T  10827745 tcaattttt 10827737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 4e-43; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 482 - 603
Target Start/End: Complemental strand, 15527348 - 15527228
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||||||||| ||||||||| ||||||||| ||||||| || |||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  15527348 ggttttttctacattactctctcttgtctagagggta-tttaccctttcaagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaatgtcaa 15527250  T
Q  582 ataaatgagtcaatttttctat 603  Q
    ||||||||||||||||||||||    
T  15527249 ataaatgagtcaatttttctat 15527228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 484 - 597
Target Start/End: Complemental strand, 6720955 - 6720842
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaa-tgtaacattaaatgtcaaa 582  Q
    |||||||||||||||||| |||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  6720955 ttttttctacattaccctatcttgtttagagggta-tttatcccttcaagatatcaatcaatcaaaatgtaatatacaaaatgtaacattaaatgtcaaa 6720857  T
Q  583 taaatgagtcaattt 597  Q
    ||||||| |||||||    
T  6720856 taaatgaatcaattt 6720842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 5103057 - 5102941
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||| ||||||||||||||||||||  ||||| |||||||||| |||||||||| |||||||||||| ||||| |||||||||||||||||||||    
T  5103057 ggttttttcaacattaccctctcttgtttatggggta-tttaccccttcaagatatcaaccaatcaaaatgtgatatacaaatgtaacattaaatgtcaa 5102959  T
Q  582 ataaatgagtcaattttt 599  Q
    |||||||| |||||||||    
T  5102958 ataaatgaatcaattttt 5102941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 494 - 603
Target Start/End: Original strand, 15524123 - 15524231
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtca 593  Q
    |||||| ||||||||||||||| || ||||||| || |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  15524123 attaccttctcttgtttagaggata-tttaccctttcaagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaatgtcaaataaatgagtca 15524221  T
Q  594 atttttctat 603  Q
    ||||||||||    
T  15524222 atttttctat 15524231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 485 - 603
Target Start/End: Complemental strand, 37256456 - 37256339
Alignment:
Q  485 tttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaata 584  Q
    |||||||| ||||| ||||||||||||  ||||| |||| ||||| || ||||||| |||||||||||||||||| |||| |||||||||||||||||||    
T  37256456 tttttctatattactctctcttgtttaaggggta-tttatcccttcaaaatatcaaccaatcaaaatgtaatatacaaatataacattaaatgtcaaata 37256358  T
Q  585 aatgagtcaatttttctat 603  Q
    |||||||||||||||||||    
T  37256357 aatgagtcaatttttctat 37256339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 489 - 590
Target Start/End: Original strand, 9591612 - 9591713
Alignment:
Q  489 tctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatg 588  Q
    ||||||||||||||||||||||||||||||||||||||  | | |||||||| |||||||||||||||||| | | ||||||||||||||||||||||||    
T  9591612 tctacattaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatg 9591711  T
Q  589 ag 590  Q
    ||    
T  9591712 ag 9591713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 494 - 599
Target Start/End: Complemental strand, 29391042 - 29390937
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtca 593  Q
    ||||||||||||||||||||||||| ||||||| || ||||| |||| ||||||||||| |||||| ||||||||||||||||||||||||||||| |||    
T  29391042 attaccctctcttgtttagagggtattttaccctttcaagatttcaaccaatcaaaatgcaatatacaaatgtaacattaaatgtcaaataaatgattca 29390943  T
Q  594 attttt 599  Q
     |||||    
T  29390942 tttttt 29390937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 490 - 596
Target Start/End: Complemental strand, 745801 - 745695
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| ||||||||||||||||||||||||||||||||  | | |||||||| |||||||||||||||||| | | |||||||||||||||||||||||||    
T  745801 ctacgttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatga 745702  T
Q  590 gtcaatt 596  Q
    || ||||    
T  745701 gtaaatt 745695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 483 - 589
Target Start/End: Original strand, 29388962 - 29389068
Alignment:
Q  483 gttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaa 582  Q
    |||||||||||||||| |||||||||||||||  || ||||||| || ||||| |||| ||||||||||| |||||| ||||||||||||||||||||||    
T  29388962 gttttttctacattactctctcttgtttagagaatattttaccctttcaagatttcaaccaatcaaaatgcaatatacaaatgtaacattaaatgtcaaa 29389061  T
Q  583 taaatga 589  Q
    |||||||    
T  29389062 taaatga 29389068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 485 - 587
Target Start/End: Original strand, 3033069 - 3033171
Alignment:
Q  485 tttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgt-aacattaaatgtcaaat 583  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| || ||||||| ||||||||||||||| || |||||| |||||||||||| ||||    
T  3033069 tttttctacattaccctctcttgtttagagggt-atttaccccttcaaaatatcaaccaatcaaaatgtaatgtacaaatgtaaacattaaatgttaaat 3033167  T
Q  584 aaat 587  Q
    ||||    
T  3033168 aaat 3033171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 490 - 597
Target Start/End: Original strand, 34857951 - 34858057
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||||||||||||| |||||||| | ||| ||||||| || |||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||    
T  34857951 ctacattaccctcttttgtttagggagta-tttaccctttcaagatatcaaccaatcaaaatgtaatatacaaatataacattaaatgtcaaataaatga 34858049  T
Q  590 gtcaattt 597  Q
     |||||||    
T  34858050 atcaattt 34858057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 494 - 599
Target Start/End: Complemental strand, 8526351 - 8526247
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtca 593  Q
    ||||||||||||||||||   |||| ||||||| || |||||||||  ||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  8526351 attaccctctcttgtttaagaggta-tttaccctttcaagatatcagccaatcaaaatgtactatacaaatgtaacattaaatgtcaaataaatgagtca 8526253  T
Q  594 attttt 599  Q
    ||||||    
T  8526252 attttt 8526247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 490 - 591
Target Start/End: Complemental strand, 42612456 - 42612355
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| ||||||||||||||||||||||||||||||||  | |  ||||||| |||||||||||||||||| | | |||||||||||||||||||||||||    
T  42612456 ctacgttaccctctcttgtttagagggtaatttaccctctcataatatcaaccaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatga 42612357  T
Q  590 gt 591  Q
    ||    
T  42612356 gt 42612355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 495 - 591
Target Start/End: Original strand, 19664770 - 19664866
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||||||| ||||||||||||||||||||||  | | |||||||| |||||||||||||||||| | | |||||||||||||||||||||||||||    
T  19664770 ttaccctctattgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatgagt 19664866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 501 - 592
Target Start/End: Original strand, 6719494 - 6719584
Alignment:
Q  501 tctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtc 592  Q
    |||||||||||| || || ||||||| || |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  6719494 tctcttgtttaggggata-tttaccctttcaagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaatgtcaaataaatgagtc 6719584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 489 - 603
Target Start/End: Complemental strand, 3036474 - 3036361
Alignment:
Q  489 tctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatg 588  Q
    |||| |||||||||| |||| ||  ||||| |||| || || |||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  3036474 tctagattaccctcttttgtataaggggta-tttatcctttcaagatatcaaccaatcaaaatgtaatataaaaatgcaacattaaatgtcaaataaatg 3036376  T
Q  589 agtcaatttttctat 603  Q
    ||||| |||||||||    
T  3036375 agtcactttttctat 3036361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 484 - 599
Target Start/End: Original strand, 8520240 - 8520361
Alignment:
Q  484 ttttttctacattaccctctcttgtttagag------ggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatg 577  Q
    |||||||||||||||||| |||| |||||||      || | |||||||||| ||| |||||| ||||||||||||||||||||||||||| ||||||||    
T  8520240 ttttttctacattaccctttcttctttagagagagagggcattttaccccttcaagttatcaaccaatcaaaatgtaatatataaatgtaatattaaatg 8520339  T
Q  578 tcaaataaatgagtcaattttt 599  Q
    | |||||||| |||||||||||    
T  8520340 ttaaataaattagtcaattttt 8520361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 489 - 591
Target Start/End: Complemental strand, 37940190 - 37940088
Alignment:
Q  489 tctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatg 588  Q
    ||||| |||| |||||||||||||||||||||||||||  | | |||||||| |||||||||||||||||| | | |||||||||||||||||||||| |    
T  37940190 tctacgttactctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacataggtaacattaaatgtcaaataaacg 37940091  T
Q  589 agt 591  Q
    |||    
T  37940090 agt 37940088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 483 - 599
Target Start/End: Original strand, 7179660 - 7179773
Alignment:
Q  483 gttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaa 582  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||| | |||||||| |||||||||||||||||| |     |||||||||||||  |    
T  7179660 gttttttctagattaccctctcttgtttagagggt-atttaccccttcatgatatcaaccaatcaaaatgtaatatacattgacaacattaaatgtc--a 7179756  T
Q  583 taaatgagtcaattttt 599  Q
    |||||||||||||||||    
T  7179757 taaatgagtcaattttt 7179773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 531 - 603
Target Start/End: Original strand, 29639371 - 29639444
Alignment:
Q  531 aagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaa-tttttctat 603  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  29639371 aagatgtcaatcaatcaaaatgtaatatacaaatgtaacattaaatgtcaaataaatgagtcaagtttttctat 29639444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 490 - 591
Target Start/End: Original strand, 37270247 - 37270347
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| ||||||||||||||||||||||||||| ||||  ||| |||||||| |||||||||||||||||| | | | |||||||||||||||||||||||    
T  37270247 ctacgttaccctctcttgtttagagggtaatt-accctattatgatatcaaccaatcaaaatgtaatatacataaggaacattaaatgtcaaataaatga 37270345  T
Q  590 gt 591  Q
    ||    
T  37270346 gt 37270347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 495 - 591
Target Start/End: Original strand, 12499226 - 12499322
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||||||| ||||||||||||||||||||||  | | |||||||| |||||||||||||||||| | | |||||||||||||| ||||||||||||    
T  12499226 ttaccctcttttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacataggtaacattaaatgttaaataaatgagt 12499322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 495 - 591
Target Start/End: Original strand, 39588266 - 39588362
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||||||||||||||||||||||||||| ||  | |  ||||||| |||||||||||||||||| | | |||||||||||||||||||||||||||    
T  39588266 ttaccctctcttgtttagagggtaatttatcctctcataatatcaaccaatcaaaatgtaatatacataagtaacattaaatgtcaaataaatgagt 39588362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 481 - 599
Target Start/End: Original strand, 27018121 - 27018237
Alignment:
Q  481 aggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtca 580  Q
    |||||||||||| ||||||||||||| |||||| |||| |||||||  ||| |||||||| |||||||||||||||||| |   | ||||||||||||      
T  27018121 aggttttttctagattaccctctcttatttagaaggtattttaccctcttatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgt-- 27018218  T
Q  581 aataaatgagtcaattttt 599  Q
    |||||||||||||||||||    
T  27018219 aataaatgagtcaattttt 27018237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 495 - 599
Target Start/End: Complemental strand, 825029 - 824928
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaa 594  Q
    |||||||||||||||||||||||||||||| | || | |||| |   |||||||||||||||||| | | ||||||||||||||||||||||||||| ||    
T  825029 ttaccctctcttgtttagagggtaatttactctttcatgataac---caatcaaaatgtaatatagataggtaacattaaatgtcaaataaatgagtaaa 824933  T
Q  595 ttttt 599  Q
    |||||    
T  824932 ttttt 824928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 494 - 576
Target Start/End: Original strand, 5099860 - 5099941
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaat 576  Q
    ||||||||||||||||||| ||||| ||||||| || |||||||||| |||||||||||||||||| ||||||||||||||||    
T  5099860 attaccctctcttgtttagggggta-tttaccctttcaagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaat 5099941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 39590786 - 39590671
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| ||||||||||||| ||||||||||| |||||||  | | |||||||| |||||||||||||||||| |   | |||||||||||||      
T  39590786 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtc-- 39590689  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  39590688 ataaatgagtcaattttt 39590671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 494 - 591
Target Start/End: Complemental strand, 20546387 - 20546290
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    |||||||||| |||||||||||||||||||| |  | | |||||||| |||||||||||| ||||| | | |||||||||||||||||||||||||||    
T  20546387 attaccctcttttgtttagagggtaatttacactctcatgatatcaaccaatcaaaatgttatatacataggtaacattaaatgtcaaataaatgagt 20546290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 483 - 599
Target Start/End: Original strand, 31547465 - 31547579
Alignment:
Q  483 gttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaa 582  Q
    |||||||||| |||||||| |||||||||||||||| |||||||||| | |||||||| |||||||||||||||||| |     |||||||||||||  |    
T  31547465 gttttttctagattaccctttcttgtttagagggtattttaccccttcatgatatcaaccaatcaaaatgtaatatacattgacaacattaaatgtc--a 31547562  T
Q  583 taaatgagtcaattttt 599  Q
    || ||||||||||||||    
T  31547563 tatatgagtcaattttt 31547579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 519 - 603
Target Start/End: Original strand, 37249692 - 37249776
Alignment:
Q  519 atttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaatttttctat 603  Q
    |||||||| || || ||||||| ||||||||||| ||| || ||||||||||||||||||||||||| |||||||||||||||||    
T  37249692 atttaccctttcaatatatcaaccaatcaaaatgcaatttacaaatgtaacattaaatgtcaaataactgagtcaatttttctat 37249776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 484 - 599
Target Start/End: Original strand, 37938494 - 37938607
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    ||||||||| ||||||||||||| ||||||||||| |||||||  | | |||||||| |||||||||||||||||| |   | |||||||||||||  ||    
T  37938494 ttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtc--at 37938591  T
Q  584 aaatgagtcaattttt 599  Q
    ||||||||||||||||    
T  37938592 aaatgagtcaattttt 37938607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 490 - 561
Target Start/End: Complemental strand, 27020281 - 27020210
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatata 561  Q
    |||||||||||||||||||||||||||||||||||||  | | |||||||| ||||||||||||||||||||    
T  27020281 ctacattaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatata 27020210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 489 - 591
Target Start/End: Original strand, 34401517 - 34401618
Alignment:
Q  489 tctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatg 588  Q
    ||||| ||||||||||||||||||||||||||| || |  | | |||||||| |||||||||||||||||| | | |||||||||||| |||||||||||    
T  34401517 tctacgttaccctctcttgtttagagggtaatt-actctctcatgatatcaaccaatcaaaatgtaatatacataagtaacattaaatatcaaataaatg 34401615  T
Q  589 agt 591  Q
    |||    
T  34401616 agt 34401618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 488 - 599
Target Start/End: Complemental strand, 15527483 - 15527375
Alignment:
Q  488 ttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaat 587  Q
    ||||| |||||||||||||||||||||||| ||||||||  ||| |||||||| |||||||||||||||||| |   | |||||||||||||  ||||||    
T  15527483 ttctagattaccctctcttgtttagagggt-atttaccctcttatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtc--ataaat 15527387  T
Q  588 gagtcaattttt 599  Q
    ||| ||||||||    
T  15527386 gagacaattttt 15527375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 9593904 - 9593789
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| ||||||||||||| ||||||||||| |||||||  | | |||||||| |||||||||| ||||||| |     |||||||||||||      
T  9593904 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatataatatacattgacaacattaaatgtc-- 9593807  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  9593806 ataaatgagtcaattttt 9593789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 483 - 599
Target Start/End: Original strand, 30128626 - 30128740
Alignment:
Q  483 gttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaa 582  Q
    |||||||||| ||||||||||||| ||||||||||| ||||| |  | | |||||||| |||||||||||||||||| |   | |||||||||||||  |    
T  30128626 gttttttctagattaccctctcttatttagagggtattttacgctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtc--a 30128723  T
Q  583 taaatgagtcaattttt 599  Q
    ||||||| |||||||||    
T  30128724 taaatgactcaattttt 30128740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 482 - 599
Target Start/End: Original strand, 822818 - 822933
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| ||||||||||||| ||||||||||| |||||||  | | || ||||| |||||||||||||||||| |     |||||||||||||      
T  822818 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgacatcaaccaatcaaaatgtaatatacattgacaacattaaatgtc-- 822915  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||| ||||    
T  822916 ataaatgagtcaaatttt 822933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 482 - 599
Target Start/End: Original strand, 9985359 - 9985473
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| |||||||||||||||||||||||| |||||| | || | ||||||||  ||||||||||||||||| |     |||||||||| ||      
T  9985359 ggttttttctaaattaccctctcttgtttagagggt-atttactcattcatgatatcaactaatcaaaatgtaatatacattgacaacattaaatatc-- 9985455  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  9985456 ataaatgagtcaattttt 9985473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 533 - 591
Target Start/End: Complemental strand, 9987476 - 9987418
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    |||||||| |||||||||||||||||| | | |||||||||||||||||||||||||||    
T  9987476 gatatcaaccaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatgagt 9987418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 533 - 591
Target Start/End: Complemental strand, 13305623 - 13305565
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    |||||||| |||||||||||||||||| | | |||||||||||||||||||||||||||    
T  13305623 gatatcaaccaatcaaaatgtaatatacataagtaacattaaatgtcaaataaatgagt 13305565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 489 - 599
Target Start/End: Complemental strand, 34663641 - 34663532
Alignment:
Q  489 tctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatg 588  Q
    ||||| |||||||||||| |||||  ||||||| ||||  | | |||||||| ||||||||||||| |||| | | ||||||||||||||||||||| ||    
T  34663641 tctacgttaccctctcttatttaggaggtaatt-accctctcatgatatcaaccaatcaaaatgtagtatacataggtaacattaaatgtcaaataagtg 34663543  T
Q  589 agtcaattttt 599  Q
    | |||||||||    
T  34663542 actcaattttt 34663532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 482 - 559
Target Start/End: Complemental strand, 12501478 - 12501401
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatata 559  Q
    ||||||||||| ||||||||||||| ||||||||||| |||||||  | | |||||||  ||||||||||||||||||    
T  12501478 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcagccaatcaaaatgtaatata 12501401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 482 - 559
Target Start/End: Complemental strand, 27552738 - 27552662
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatata 559  Q
    ||||||||||| ||||| |||| |||||||||||||| |||| ||||| | |||||||| ||||||||||||||||||    
T  27552738 ggttttttctagattactctcttttgtttagagggta-tttatcccttcatgatatcaaccaatcaaaatgtaatata 27552662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 534 - 591
Target Start/End: Complemental strand, 31552314 - 31552257
Alignment:
Q  534 atatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||||| |||||||||||||||||| | | |||||||||||||||||||||||||||    
T  31552314 atatcaaccaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatgagt 31552257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 489 - 591
Target Start/End: Complemental strand, 7181279 - 7181177
Alignment:
Q  489 tctacattaccctctctt-gtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaat 587  Q
    ||||| |||| ||||||| ||||||||||||||| ||||  | | |||||||| |||||||||||||| ||| | | |||| ||||||||||||||||||    
T  7181279 tctacgttacgctctctttgtttagagggtaatt-accctctcatgatatcaaccaatcaaaatgtaacatacataggtaatattaaatgtcaaataaat 7181181  T
Q  588 gagt 591  Q
    ||||    
T  7181180 gagt 7181177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 533 - 591
Target Start/End: Original strand, 11984523 - 11984579
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    |||||||| ||||||||||||||||||||   |||||||||||||||||||||||||||    
T  11984523 gatatcaaccaatcaaaatgtaatatatag--gtaacattaaatgtcaaataaatgagt 11984579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 480 - 559
Target Start/End: Complemental strand, 19505119 - 19505041
Alignment:
Q  480 taggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatata 559  Q
    |||||||||  || |||||||||||||||||||||||| ||||||||  | | ||||||||| |||||||||||||||||    
T  19505119 taggtttttcatagattaccctctcttgtttagagggt-atttaccctctcatgatatcaattaatcaaaatgtaatata 19505041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 482 - 599
Target Start/End: Original strand, 744072 - 744187
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| |||| |||||||| ||||||||||| |||||||  | | |||||||| |||| ||||||||||||| |     ||| |||||||||      
T  744072 ggttttttctagattatcctctcttatttagagggtattttaccctctcatgatatcaaccaattaaaatgtaatatacattgacaacgttaaatgtc-- 744169  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  744170 ataaatgagtcaattttt 744187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 489 - 599
Target Start/End: Original strand, 11076796 - 11076906
Alignment:
Q  489 tctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatg 588  Q
    ||||| |||||||||||||||||| |||  | |||||   | | |||||||| |||||||||| |||| || | | | ||||||||||||||||||||||    
T  11076796 tctacgttaccctctcttgtttaggggggtaattaccttctcatgatatcaaccaatcaaaatataatttacataggcaacattaaatgtcaaataaatg 11076895  T
Q  589 agtcaattttt 599  Q
     ||||||||||    
T  11076896 cgtcaattttt 11076906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 533 - 599
Target Start/End: Complemental strand, 11078457 - 11078391
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaattttt 599  Q
    |||||||| |||||||||||||||||| |     |||||||||||||||||||||||||||||||||    
T  11078457 gatatcaaccaatcaaaatgtaatatacattgacaacattaaatgtcaaataaatgagtcaattttt 11078391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 482 - 599
Target Start/End: Original strand, 20544189 - 20544304
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| |||| |||||||| ||||||||||| |||||||  | | ||||| || |||||||||| ||||||| |   | |||||||||||||      
T  20544189 ggttttttctagattatcctctcttatttagagggtattttaccctctcatgatattaaccaatcaaaatataatatacattggaaacattaaatgtc-- 20544286  T
Q  582 ataaatgagtcaattttt 599  Q
    |||||||||| |||||||    
T  20544287 ataaatgagttaattttt 20544304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 533 - 591
Target Start/End: Original strand, 27550648 - 27550706
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    |||||||| |||||||||||||||||| | | |||||||||||| ||||||||||||||    
T  27550648 gatatcaaccaatcaaaatgtaatatacataggtaacattaaatttcaaataaatgagt 27550706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 599
Target Start/End: Complemental strand, 34402222 - 34402111
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    ||||||||| |||||| ||||||||||||||| || |||||||  ||| |||||||| |||||||||||||||||| |     ||||||||||||   ||    
T  34402222 ttttttctaaattacc-tctcttgtttagaggata-tttaccctcttatgatatcaaccaatcaaaatgtaatatacattgacaacattaaatgt--tat 34402127  T
Q  584 aaatgagtcaattttt 599  Q
    ||||||||||||||||    
T  34402126 aaatgagtcaattttt 34402111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 19666697 - 19666582
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| ||||||||||||  |||||| |||| |||||||  | | ||||| || |||||||||||||||||| |   | |||||||||| ||      
T  19666697 ggttttttctagattaccctctctaatttagaaggtattttaccctctcatgatataaaccaatcaaaatgtaatatacattggcaacattaaatatc-- 19666600  T
Q  582 ataaatgagtcaattttt 599  Q
    |||||||| |||||||||    
T  19666599 ataaatgaatcaattttt 19666582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 560 - 600
Target Start/End: Complemental strand, 29640457 - 29640417
Alignment:
Q  560 taaatgtaacattaaatgtcaaataaatgagtcaatttttc 600  Q
    ||||||||||||||||||||| |||||||||| ||||||||    
T  29640457 taaatgtaacattaaatgtcagataaatgagttaatttttc 29640417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 501 - 599
Target Start/End: Original strand, 42609923 - 42610019
Alignment:
Q  501 tctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaattttt 599  Q
    |||||| ||||||||||| |||||||  | | |||||||| |||||||||||||||||| |     || ||||||||||  ||||||||||||||||||    
T  42609923 tctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattgacaatattaaatgtc--ataaatgagtcaattttt 42610019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 573 - 603
Target Start/End: Original strand, 5100316 - 5100346
Alignment:
Q  573 aaatgtcaaataaatgagtcaatttttctat 603  Q
    |||||||||||||||||||||||||||||||    
T  5100316 aaatgtcaaataaatgagtcaatttttctat 5100346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 4e-43; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 21191922 - 21191805
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||| ||||||||||| |||||| |||||||||||||||||||||    
T  21191922 ggttttttctacattaccctctcttgtttagagggtattttaccctttcaagatatcaaccaatcaaaatgcaatatacaaatgtaacattaaatgtcaa 21191823  T
Q  582 ataaatgagtcaattttt 599  Q
    |||||||| |||||||||    
T  21191822 ataaatgactcaattttt 21191805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 482 - 603
Target Start/End: Complemental strand, 33182918 - 33182798
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    |||||||||||||||||||||| || |||||| |||| ||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||    
T  33182918 ggttttttctacattaccctcttttatttagatggta-tttacccctttaagatatcaaccaatcaaaatttaatatacaaatgtaacattaaatgtcaa 33182820  T
Q  582 ataaatgagtcaatttttctat 603  Q
    ||||||||||||||||||||||    
T  33182819 ataaatgagtcaatttttctat 33182798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 494 - 603
Target Start/End: Original strand, 39159856 - 39159964
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtca 593  Q
    ||||||||||||||||||||| ||| ||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  39159856 attaccctctcttgtttagagagta-tttacccttttaagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaatgtcaaataaatgagtca 39159954  T
Q  594 atttttctat 603  Q
    ||||||||||    
T  39159955 atttttctat 39159964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 494 - 603
Target Start/End: Complemental strand, 39209338 - 39209230
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtca 593  Q
    ||||||||||||||||||||| ||| ||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  39209338 attaccctctcttgtttagagagta-tttacccttttaagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaatgtcaaataaatgagtca 39209240  T
Q  594 atttttctat 603  Q
    ||||||||||    
T  39209239 atttttctat 39209230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 484 - 603
Target Start/End: Original strand, 6319287 - 6319405
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    ||||||||||||||||||||||||||||| ||| | |||||||||| || ||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  6319287 ttttttctacattaccctctcttgtttagcgggga-tttaccccttcaaaatatcaaccaatcaaaatgtaatatacaaatataacattaaatgtcaaat 6319385  T
Q  584 aaatgagtcaatttttctat 603  Q
    ||||||||||||||||||||    
T  6319386 aaatgagtcaatttttctat 6319405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 481 - 597
Target Start/End: Original strand, 20919092 - 20919207
Alignment:
Q  481 aggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatata-taaatgtaacattaaatgtc 579  Q
    ||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||  |||| ||||||||||||||    
T  20919092 aggttttttctacattacc-tctcttgtttagagggta-tttacctctttaagatatcaatcaatcaaaatgtaatatacaaaatataacattaaatgtc 20919189  T
Q  580 aaataaatgagtcaattt 597  Q
    ||||||||||||||||||    
T  20919190 aaataaatgagtcaattt 20919207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 488 - 603
Target Start/End: Original strand, 14452057 - 14452171
Alignment:
Q  488 ttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaat 587  Q
    |||||||||||||||  |||||||||||||| ||||||| || |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||    
T  14452057 ttctacattaccctcatttgtttagagggta-tttacccattcaagatatcaaccaatcaaaatgtaatatacaaatgtaaaattaaatgtcaaataaat 14452155  T
Q  588 gagtcaatttttctat 603  Q
    ||||||||||||||||    
T  14452156 gagtcaatttttctat 14452171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 494 - 600
Target Start/End: Complemental strand, 6322478 - 6322373
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtca 593  Q
    ||||||||||||||||||||| ||| ||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  6322478 attaccctctcttgtttagagagta-tttacccttttaagatatcaaccaatcaaaatataatatataaatgtaacattaaatgtcaaataaatgagtca 6322380  T
Q  594 atttttc 600  Q
    | |||||    
T  6322379 aattttc 6322373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 481 - 603
Target Start/End: Complemental strand, 36603082 - 36602961
Alignment:
Q  481 aggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtca 580  Q
    |||||||||||||||||||||||||| |||| | |||| ||||| |||| |||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  36603082 aggttttttctacattaccctctcttatttaaaaggta-tttactccttcaagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaatgtca 36602984  T
Q  581 aataaatgagtcaatttttctat 603  Q
    ||||||| ||| |||||||||||    
T  36602983 aataaataagtaaatttttctat 36602961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 484 - 598
Target Start/End: Complemental strand, 38932585 - 38932473
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||| |||||||||||||||||| ||||||||||||||||||| |||    
T  38932585 ttttttctacattaccctctcttgtttagagggta-tttactccttcaagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaatgtc-aat 38932488  T
Q  584 aaatgagtcaatttt 598  Q
    |||| ||||||||||    
T  38932487 aaattagtcaatttt 38932473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 494 - 603
Target Start/End: Complemental strand, 18248721 - 18248613
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtca 593  Q
    |||||||| |||||||||||| ||| ||||||  || |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18248721 attaccctatcttgtttagagagta-tttaccaattcaagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaatgtcaaataaatgagtca 18248623  T
Q  594 atttttctat 603  Q
    ||||||||||    
T  18248622 atttttctat 18248613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 491 - 599
Target Start/End: Complemental strand, 21178612 - 21178504
Alignment:
Q  491 tacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaa-tgtaacattaaatgtcaaataaatga 589  Q
    |||||||||||||||||||||||| ||| |||||||||| ||||||||||  ||||||||||||||||| ||| ||||| ||||||||||||||||||||    
T  21178612 tacattaccctctcttgtttagagagta-tttaccccttcaagatatcaactaatcaaaatgtaatatacaaaatgtaatattaaatgtcaaataaatga 21178514  T
Q  590 gtcaattttt 599  Q
    ||||||||||    
T  21178513 gtcaattttt 21178504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 494 - 599
Target Start/End: Complemental strand, 24460853 - 24460749
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtca 593  Q
    ||||||||||||||||||| ||||| ||||||  || |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  24460853 attaccctctcttgtttagggggta-tttaccttttcaagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaatgtcaaataaatgagtaa 24460755  T
Q  594 attttt 599  Q
    ||||||    
T  24460754 attttt 24460749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 494 - 603
Target Start/End: Original strand, 518051 - 518160
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtca 593  Q
    |||||||| |||||||||| | ||| ||||||| || ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  518051 attaccctatcttgtttagggtgta-tttaccctttcaagatatcaatcaatcaaaatgtaatatacaaatgtaatattaaatgtcaaataaatgagtca 518149  T
Q  594 at-ttttctat 603  Q
    || ||||||||    
T  518150 atattttctat 518160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 490 - 591
Target Start/End: Complemental strand, 3907110 - 3907009
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    ||||||||| |||||||||||||||||||||||||||  | | |||||||| |||||||||||||||||| | | |||||||||||||||||||||||||    
T  3907110 ctacattacactctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacataagtaacattaaatgtcaaataaatga 3907011  T
Q  590 gt 591  Q
    ||    
T  3907010 gt 3907009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 490 - 591
Target Start/End: Complemental strand, 14006255 - 14006154
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||||||||||||||||||| ||||||||||||||||  | | |||||||| |||||||||||||||||||| |||||||||||||| |||| |||||||    
T  14006255 ctacattaccctctcttgttaagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatatatatgtaacattaaatttcaattaaatga 14006156  T
Q  590 gt 591  Q
    ||    
T  14006155 gt 14006154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 481 - 597
Target Start/End: Original strand, 27477706 - 27477822
Alignment:
Q  481 aggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaa-tgtaacattaaatgtc 579  Q
    ||||||||||||||||||  ||||||||||||| |||| |||||| ||  || ||||||| |||||||||||||||||| ||| ||||||||||||||||    
T  27477706 aggttttttctacattactttctcttgtttagaaggta-tttacctctaaaaaatatcaaccaatcaaaatgtaatatacaaaatgtaacattaaatgtc 27477804  T
Q  580 aaataaatgagtcaattt 597  Q
    ||||||||||||||||||    
T  27477805 aaataaatgagtcaattt 27477822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 494 - 599
Target Start/End: Complemental strand, 27479198 - 27479094
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtca 593  Q
    |||||| | |||||||||  ||||| ||||||| || |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27479198 attaccttttcttgtttaaggggta-tttaccctttcaagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaatgtcaaataaatgagtca 27479100  T
Q  594 attttt 599  Q
    ||||||    
T  27479099 attttt 27479094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 495 - 591
Target Start/End: Complemental strand, 38282463 - 38282367
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||||||||||||||||||||||||||| ||  | | ||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||    
T  38282463 ttaccctctcttgtttagagggtaatttatcctctcatgatatcaatcaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatgagt 38282367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 494 - 603
Target Start/End: Complemental strand, 20920004 - 20919895
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtca 593  Q
    |||| ||||||||||||||  |||| ||||||| || ||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20920004 attatcctctcttgtttaggaggta-tttaccctttcaagatatcaactaatcaaaatgtaatatacaaatgtaacattaaatgtcaaataaatgagtca 20919906  T
Q  594 at-ttttctat 603  Q
    || ||||||||    
T  20919905 atattttctat 20919895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 521 - 603
Target Start/End: Original strand, 33178745 - 33178827
Alignment:
Q  521 ttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaatttttctat 603  Q
    |||||| || |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  33178745 ttaccctttcaagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaatgtcaaataaatgagtcaaattttctat 33178827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 489 - 603
Target Start/End: Complemental strand, 39880036 - 39879923
Alignment:
Q  489 tctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatg 588  Q
    |||| |||||||||| || ||||  ||||| ||||||| ||  | |||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  39880036 tctagattaccctcttttatttaaggggta-tttaccctttcgatatatcaatcaatcaaaatgtaatatacaaatataacattaaatgtcaaataaatg 39879938  T
Q  589 agtcaatttttctat 603  Q
    |||||||||||||||    
T  39879937 agtcaatttttctat 39879923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 585
Target Start/End: Complemental strand, 7296703 - 7296603
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    ||||||||| |||| ||||||||||||||  |||| ||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  7296703 ttttttctatattatcctctcttgtttaggaggta-tttactccttcaagatatcaatcaatcaaaatgtaatatacaaatgtaacattaaatgttaaat 7296605  T
Q  584 aa 585  Q
    ||    
T  7296604 aa 7296603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 494 - 602
Target Start/End: Complemental strand, 14454699 - 14454594
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtca 593  Q
    |||||||||| ||||| || ||||| ||||||| || |||||||||| |||||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  14454699 attaccctcttttgttcagggggta-tttaccctttcaagatatcaaccaatcaaaatgtaatataca--tgtaacattaaatgtcaaataaatgagtca 14454603  T
Q  594 atttttcta 602  Q
    |||||||||    
T  14454602 atttttcta 14454594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 528 - 592
Target Start/End: Original strand, 36600735 - 36600799
Alignment:
Q  528 tttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtc 592  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36600735 tttaagatatcaaccaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtc 36600799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 484 - 582
Target Start/End: Original strand, 24457845 - 24457943
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatata-taaatgtaacattaaatgtcaaa 582  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||| || ||||||| ||||||||||  |||||||||||||||| |||||    
T  24457845 ttttttctacattaccctctcttgtttagagggt-atttaccccttcaagatattaaccaatcaagatgtaatatacaaaatgtaacattaaatatcaaa 24457943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 526 - 599
Target Start/End: Original strand, 18246481 - 18246554
Alignment:
Q  526 cctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaattttt 599  Q
    |||| |||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  18246481 ccttgaagatatcaaccaatcaaaatgtgatatacaaatgtaacattaaatgtcaaataaatgagtcaattttt 18246554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 490 - 591
Target Start/End: Complemental strand, 28392007 - 28391907
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| ||||||||||||||||||||| ||||| ||||  | | ||||||||||||||||||||||||||| | | |||||| ||||||||||||||||||    
T  28392007 ctacgttaccctctcttgtttagaggataatt-accctctcatgatatcaatcaatcaaaatgtaatatacataggtaacaataaatgtcaaataaatga 28391909  T
Q  590 gt 591  Q
    ||    
T  28391908 gt 28391907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 494 - 597
Target Start/End: Original strand, 10454381 - 10454485
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaa-tgtaacattaaatgtcaaataaatgagtc 592  Q
    ||||| ||||||||||||| |||  ||||| || || |||||||||| |||| ||||||||||||| ||| ||||||||||||| |||||||||||||||    
T  10454381 attacactctcttgtttaggggggtatttatcctttcaagatatcaaccaattaaaatgtaatatacaaaatgtaacattaaatatcaaataaatgagtc 10454480  T
Q  593 aattt 597  Q
    |||||    
T  10454481 aattt 10454485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 482 - 586
Target Start/End: Complemental strand, 24520547 - 24520444
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    |||||||||||  |||||||||||||||||  ||||| ||||||| || ||||||||||  ||||||||| | ||||| |||||||||||||||||||||    
T  24520547 ggttttttctatgttaccctctcttgtttatggggta-tttacccgttcaagatatcaactaatcaaaatatgatatacaaatgtaacattaaatgtcaa 24520449  T
Q  582 ataaa 586  Q
    |||||    
T  24520448 ataaa 24520444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 484 - 599
Target Start/End: Complemental strand, 25225458 - 25225345
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    |||||| || ||||||||||||| ||||||||||| |||||||  ||| |||||||| |||||||||||||||||| |   | |||||||||||||  ||    
T  25225458 ttttttttagattaccctctcttatttagagggtattttaccctcttatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtc--at 25225361  T
Q  584 aaatgagtcaattttt 599  Q
    ||||||||||||||||    
T  25225360 aaatgagtcaattttt 25225345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 482 - 599
Target Start/End: Original strand, 1053134 - 1053248
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| ||||| |||||||||||||||||| ||||||||  | | ||||||||  |||||||||||||||||||   | |||||||||||||      
T  1053134 ggttttttctagattactctctcttgtttagagggt-atttaccctctcatgatatcaacaaatcaaaatgtaatatatattggcaacattaaatgtc-- 1053230  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  1053231 ataaatgagtcaattttt 1053248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 490 - 591
Target Start/End: Complemental strand, 77804 - 77703
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| ||||||||||||||||||| ||||||||| ||  | | ||||||||  ||||||||||||||||| | |  ||||||||||||||||||||||||    
T  77804 ctacgttaccctctcttgtttagaaggtaatttatcctctcatgatatcaacgaatcaaaatgtaatatacatagataacattaaatgtcaaataaatga 77705  T
Q  590 gt 591  Q
    ||    
T  77704 gt 77703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 490 - 591
Target Start/End: Complemental strand, 4738468 - 4738368
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| ||||||| ||||||||||||||||||| ||||  ||| ||||| || |||||||||||||||||| | |  ||||||||||||||||||||||||    
T  4738468 ctacgttaccctatcttgtttagagggtaatt-accctcttatgatatgaaccaatcaaaatgtaatatacatagataacattaaatgtcaaataaatga 4738370  T
Q  590 gt 591  Q
    ||    
T  4738369 gt 4738368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 495 - 591
Target Start/End: Complemental strand, 27551797 - 27551702
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||||||||||||||||||||||||| ||||  |   |||||||| |||||||||||||||||| | | |||||||||||||| ||||||||||||    
T  27551797 ttaccctctcttgtttagagggtaatt-accctctcctgatatcaaccaatcaaaatgtaatatacataagtaacattaaatgttaaataaatgagt 27551702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 484 - 559
Target Start/End: Complemental strand, 519761 - 519687
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatata 559  Q
    |||||||||||||||||||| ||||||||| | || |||||| |||||||||||||| ||||||||||||||||||    
T  519761 ttttttctacattaccctctattgtttagatgata-tttacctctttaagatatcaaccaatcaaaatgtaatata 519687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 481 - 599
Target Start/End: Original strand, 38280258 - 38280374
Alignment:
Q  481 aggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtca 580  Q
    |||||||||||| |||||||| | || ||||||||||| |||||||  | | |||||||| |||||||||||||||||| |   | |||||||||||||     
T  38280258 aggttttttctagattaccctattttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtc- 38280356  T
Q  581 aataaatgagtcaattttt 599  Q
     ||||||||||||||||||    
T  38280357 -ataaatgagtcaattttt 38280374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 490 - 591
Target Start/End: Complemental strand, 2292547 - 2292447
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| ||| ||||||||||||||||||||||| || |  | | ||||| || |||||||||||||||||| | | |||||||||||||||||||||||||    
T  2292547 ctacgttatcctctcttgtttagagggtaatt-actctctcatgatataaaccaatcaaaatgtaatatacataagtaacattaaatgtcaaataaatga 2292449  T
Q  590 gt 591  Q
    ||    
T  2292448 gt 2292447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 495 - 591
Target Start/End: Original strand, 15152384 - 15152479
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||||||||||||||||||||||||| || |  | |  ||||||| |||||||||||||||||| | | |||| ||||||||||||||||||||||    
T  15152384 ttaccctctcttgtttagagggtaatt-actctctcataatatcaaccaatcaaaatgtaatatacataggtaatattaaatgtcaaataaatgagt 15152479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 499 - 591
Target Start/End: Original strand, 25223326 - 25223417
Alignment:
Q  499 cctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||||||||||||||||||||||||| ||  | ||||| || |||||||||||||||||| | | ||| |||||||| ||||||||||||||    
T  25223326 cctctcttgtttagagggtaatttacctctc-atgatattaaccaatcaaaatgtaatatacataggtagcattaaatatcaaataaatgagt 25223417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 484 - 555
Target Start/End: Complemental strand, 10455748 - 10455678
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaa 555  Q
    |||||||||||||| ||||||||||||||||||| ||||| ||||| |||||||||| |||| |||||||||    
T  10455748 ttttttctacattatcctctcttgtttagagggt-atttatcccttcaagatatcaaccaattaaaatgtaa 10455678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 505 - 591
Target Start/End: Original strand, 15398831 - 15398915
Alignment:
Q  505 ttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||||||||||||||| ||||  | | |||||||| ||| |||||||||||||||| | |||||||||||||||||||||||||||    
T  15398831 ttgtttagagggtaatt-accctctcatgatatcaaccaa-caaaatgtaatatatataggtaacattaaatgtcaaataaatgagt 15398915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 534 - 599
Target Start/End: Complemental strand, 1054870 - 1054805
Alignment:
Q  534 atatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaattttt 599  Q
    ||||||| |||| ||||||||||||| | | ||||||||||||||||||||||||||| |||||||    
T  1054870 atatcaaccaattaaaatgtaatatacataggtaacattaaatgtcaaataaatgagtaaattttt 1054805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 482 - 559
Target Start/End: Complemental strand, 7575696 - 7575621
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatata 559  Q
    ||||||||||||||||||||||||||||||| |||| ||||| || || | |||||||| ||||||||||||||||||    
T  7575696 ggttttttctacattaccctctcttgtttagggggt-attta-cctttcatgatatcaaccaatcaaaatgtaatata 7575621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 484 - 599
Target Start/End: Original strand, 2290386 - 2290499
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaat--gtaacattaaatgtcaa 581  Q
    |||||| || |||||||||||||||||||||||| ||||||||  | | |||||||| |||||||||||||| ||||| ||    |||||||||||||      
T  2290386 ttttttttagattaccctctcttgtttagagggt-atttaccctctcatgatatcaaccaatcaaaatgtaa-atatacattgacaacattaaatgtc-- 2290481  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  2290482 ataaatgagtcaattttt 2290499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 528 - 599
Target Start/End: Complemental strand, 6647306 - 6647235
Alignment:
Q  528 tttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaattttt 599  Q
    |||| |||||||| ||||||||||||||||||||     || ||||||||||||||||||||||||||||||    
T  6647306 tttatgatatcaaccaatcaaaatgtaatatatattgacaatattaaatgtcaaataaatgagtcaattttt 6647235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 533 - 599
Target Start/End: Original strand, 6644587 - 6644653
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaattttt 599  Q
    ||||| || |||||||||||||||||| | |   |||||||||||||||||||||||||||||||||    
T  6644587 gatattaaccaatcaaaatgtaatatacatagacaacattaaatgtcaaataaatgagtcaattttt 6644653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 489 - 599
Target Start/End: Complemental strand, 39775254 - 39775145
Alignment:
Q  489 tctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgt--aacattaaatgtcaaataaa 586  Q
    ||||| |||||||||||| ||||| |||||||| ||||  | | |||||||| |||||||||||||||||| | || |  |||||||||| |||||||||    
T  39775254 tctacgttaccctctcttttttagggggtaatt-accc--tcatgatatcaaccaatcaaaatgtaatatacacatatgcaacattaaatatcaaataaa 39775158  T
Q  587 tgagtcaattttt 599  Q
    |||||| ||||||    
T  39775157 tgagtccattttt 39775145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 483 - 599
Target Start/End: Complemental strand, 15400992 - 15400879
Alignment:
Q  483 gttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaa 582  Q
    ||||||| || ||||| || |||||||||||||||| |||||||  | | |||||||| |||||||||||||||||| |     |||||||||||||  |    
T  15400992 gttttttttagattactctatcttgtttagagggta-tttaccctatcatgatatcaaccaatcaaaatgtaatatacattgacaacattaaatgtc--a 15400896  T
Q  583 taaatgagtcaattttt 599  Q
    |||||||||||||||||    
T  15400895 taaatgagtcaattttt 15400879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 499 - 599
Target Start/End: Original strand, 27549694 - 27549791
Alignment:
Q  499 cctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaatttt 598  Q
    |||||||||||||||  ||| |||||||||||| ||||||||  ||||||||||||||||| |     |||||||||||||  |||||||||||||||||    
T  27549694 cctctcttgtttagattgta-tttacccctttatgatatcaactaatcaaaatgtaatatacatcgaaaacattaaatgtc--ataaatgagtcaatttt 27549790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 533 - 599
Target Start/End: Complemental strand, 42080911 - 42080843
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaat--gtaacattaaatgtcaaataaatgagtcaattttt 599  Q
    |||||||| |||||||||||||||||| | ||  | ||||||||||||||||||||||||| |||||||    
T  42080911 gatatcaaccaatcaaaatgtaatatacatataggcaacattaaatgtcaaataaatgagtaaattttt 42080843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 599
Target Start/End: Original strand, 75574 - 75687
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    ||||||||| |||||||||| || ||||||||||| ||||||   ||| |||||||| |||||||||| ||||||| |   | |||||||||| ||  ||    
T  75574 ttttttctagattaccctcttttatttagagggtattttaccttcttatgatatcaaccaatcaaaatataatatacattggcaacattaaatatc--at 75671  T
Q  584 aaatgagtcaattttt 599  Q
    ||||||||||| ||||    
T  75672 aaatgagtcaaatttt 75687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 599
Target Start/End: Original strand, 39965180 - 39965293
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    ||||||||  ||||||||||||| ||||||||||| ||||  |  | | |||||||| |||||||||||||||||| |     |||||||||||||  ||    
T  39965180 ttttttctggattaccctctcttatttagagggtattttattctctcatgatatcaaccaatcaaaatgtaatatacattgacaacattaaatgtc--at 39965277  T
Q  584 aaatgagtcaattttt 599  Q
    ||||||||||||||||    
T  39965278 aaatgagtcaattttt 39965293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 490 - 591
Target Start/End: Complemental strand, 37726123 - 37726024
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| ||||||||||||||||||||| |  ||||||   | | ||||||||  ||||||||||||||||| | |  ||| ||||||||||||||||||||    
T  37726123 ctacgttaccctctcttgtttagaggat--tttaccttctcatgatatcaacaaatcaaaatgtaatatacataactaatattaaatgtcaaataaatga 37726026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 480 - 599
Target Start/End: Original strand, 28389952 - 28390067
Alignment:
Q  480 taggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtc 579  Q
    |||||||||| || ||||||||||||| ||||||||||| ||||| |  | | ||||| || |||||||||||||||||| |     |||||| ||||||    
T  28389952 taggttttttttagattaccctctcttatttagagggtattttactc--tcatgatattaaccaatcaaaatgtaatatacattgacaacattcaatgtc 28390049  T
Q  580 aaataaatgagtcaattttt 599  Q
      ||||||||||||||||||    
T  28390050 --ataaatgagtcaattttt 28390067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 533 - 599
Target Start/End: Complemental strand, 15154532 - 15154468
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaattttt 599  Q
    |||||||| ||||||||||||||||||||     |||||||||||||  ||||||||||||||||||    
T  15154532 gatatcaaccaatcaaaatgtaatatatattgacaacattaaatgtc--ataaatgagtcaattttt 15154468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 482 - 600
Target Start/End: Original strand, 39067041 - 39067156
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    |||||||| || |||||||  |||| ||||||||||| |||| ||  | | ||||||||||||| ||||||||||||| |    ||||||||||||||      
T  39067041 ggttttttttagattacccaatcttatttagagggta-tttatcctctcatgatatcaatcaattaaaatgtaatatacattgataacattaaatgtc-- 39067137  T
Q  582 ataaatgagtcaatttttc 600  Q
    |||||| ||||||||||||    
T  39067138 ataaataagtcaatttttc 39067156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 533 - 599
Target Start/End: Original strand, 42078906 - 42078971
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaattttt 599  Q
    |||||||| |||||||||||||||||| |   | ||||||||||||  |||||||||||||||||||    
T  42078906 gatatcaaccaatcaaaatgtaatatacattggcaacattaaatgt-taataaatgagtcaattttt 42078971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 533 - 599
Target Start/End: Complemental strand, 3851838 - 3851770
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaat--gtaacattaaatgtcaaataaatgagtcaattttt 599  Q
    |||||||| |||||||||| ||||||  | ||  | ||||||||||||||||||||||| |||||||||    
T  3851838 gatatcaaccaatcaaaatataatattcacataagcaacattaaatgtcaaataaatgactcaattttt 3851770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 599
Target Start/End: Original strand, 4736713 - 4736824
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    |||||| || ||||||||||||||||  ||||||| |||||||  | | |||||||| |||| |||||| ||||||||     |||||||||| ||  ||    
T  4736713 ttttttttagattaccctctcttgtt--gagggtattttaccctctcatgatatcaaccaattaaaatgcaatatatattgcaaacattaaatatc--at 4736808  T
Q  584 aaatgagtcaattttt 599  Q
    ||||||||||||||||    
T  4736809 aaatgagtcaattttt 4736824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 482 - 526
Target Start/End: Original strand, 3904919 - 3904963
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttaccc 526  Q
    |||||||| || ||||||||||||| ||||||||||| |||||||    
T  3904919 ggttttttttagattaccctctcttatttagagggtattttaccc 3904963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 477 - 525
Target Start/End: Original strand, 14004018 - 14004066
Alignment:
Q  477 atgtaggttttttctacattaccctctcttgtttagagggtaatttacc 525  Q
    |||| |||||||| || ||||||||||||| ||||||||||| ||||||    
T  14004018 atgtcggttttttttagattaccctctcttatttagagggtattttacc 14004066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 2e-41; HSPs: 78)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 481 - 603
Target Start/End: Original strand, 29725487 - 29725608
Alignment:
Q  481 aggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtca 580  Q
    |||||||||||||||||||||||||||| | | ||||| |||| || ||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  29725487 aggttttttctacattaccctctcttgtattgggggta-tttatccttttaagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaatgtca 29725585  T
Q  581 aataaatgagtcaatttttctat 603  Q
    |||||||||||||||||||||||    
T  29725586 aataaatgagtcaatttttctat 29725608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 489 - 603
Target Start/End: Original strand, 38362421 - 38362534
Alignment:
Q  489 tctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatg 588  Q
    |||| |||||||||||||||||||||  || ||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  38362421 tctagattaccctctcttgtttagagaata-tttaccctttcaagatatcaatcaatcaaaatataatatataaatgtaacattaaatgtcaaataaatg 38362519  T
Q  589 agtcaatttttctat 603  Q
    |||||||||||||||    
T  38362520 agtcaatttttctat 38362534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 482 - 603
Target Start/End: Original strand, 35019235 - 35019355
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    |||||||||||||||||||| |||| ||||||||||| |||| ||||| |||||||||| ||||||||||||| |||| |||||||||||||||||||||    
T  35019235 ggttttttctacattaccctatcttatttagagggta-tttatcccttcaagatatcaaccaatcaaaatgtactatacaaatgtaacattaaatgtcaa 35019333  T
Q  582 ataaatgagtcaatttttctat 603  Q
    |||||||||| |||||||||||    
T  35019334 ataaatgagtaaatttttctat 35019355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 481 - 600
Target Start/End: Complemental strand, 31643098 - 31642981
Alignment:
Q  481 aggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtca 580  Q
    |||||||||||||| |||||||||||| |||| ||||| ||||||| || |||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  31643098 aggttttttctacactaccctctcttgcttag-gggta-tttaccctttcaagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaatgtca 31643001  T
Q  581 aataaatgagtcaatttttc 600  Q
    ||||||||||||||||||||    
T  31643000 aataaatgagtcaatttttc 31642981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 481 - 599
Target Start/End: Original strand, 23625646 - 23625766
Alignment:
Q  481 aggttttttctacattaccctctcttgtttagagggtaatttacccctttaagata---tcaatcaatcaaaatgtaatatataaatgtaacattaaatg 577  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||   |||| |||||||||| | ||||| |||||||||||||||||    
T  23625646 aggttttttctacattaccctctcttgtttagaaggta-tttacccttttaagatactatcaaccaatcaaaatttcatatacaaatgtaacattaaatg 23625744  T
Q  578 tcaaataaatgagtcaattttt 599  Q
    ||||||||||||||||||||||    
T  23625745 tcaaataaatgagtcaattttt 23625766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 490 - 591
Target Start/End: Complemental strand, 4622955 - 4622854
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||||||||||||||||||||||||||||||||||||  ||| |||||||| |||||||||||||||||| | | |||||||||||||||||||||||||    
T  4622955 ctacattaccctctcttgtttagagggtaatttaccctcttatgatatcaaccaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatga 4622856  T
Q  590 gt 591  Q
    ||    
T  4622855 gt 4622854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 494 - 603
Target Start/End: Complemental strand, 19143262 - 19143154
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtca 593  Q
    ||||| ||||||||||||| ||||| ||||||| |||||||||| || |||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  19143262 attacgctctcttgtttagggggta-tttacccttttaagatattaaccaatcaaaatataatatacaaatgtaacattaaatgtcaaataaatgagtca 19143164  T
Q  594 atttttctat 603  Q
    ||||||||||    
T  19143163 atttttctat 19143154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 481 - 597
Target Start/End: Complemental strand, 39070377 - 39070261
Alignment:
Q  481 aggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaa-tgtaacattaaatgtc 579  Q
    ||||||||||||||||| ||| |||||||||||| ||| ||||||| || |||||||||| |||||||||||||||||| ||| ||||||||||||||||    
T  39070377 aggttttttctacattatcctatcttgtttagagtgta-tttaccctttcaagatatcaaccaatcaaaatgtaatatacaaaatgtaacattaaatgtc 39070279  T
Q  580 aaataaatgagtcaattt 597  Q
    ||||||||||||||||||    
T  39070278 aaataaatgagtcaattt 39070261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 494 - 603
Target Start/End: Complemental strand, 41671542 - 41671434
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtca 593  Q
    |||||||| ||||||||| |||||| ||||||| || |||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  41671542 attaccctatcttgtttatagggta-tttaccctttcaagatatcaaccaatcaacatgtaatatacaaatgtaacattaaatgtcaaataaatgagtca 41671444  T
Q  594 atttttctat 603  Q
    ||||||||||    
T  41671443 atttttctat 41671434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 490 - 591
Target Start/End: Original strand, 276585 - 276686
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||||||||||||||||||||| ||||||||||||||  | | |||||||| |||||||||||||||||||| | |||||||||||||||||||||||||    
T  276585 ctacattaccctctcttgtttatagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatatataggtaacattaaatgtcaaataaatga 276684  T
Q  590 gt 591  Q
    ||    
T  276685 gt 276686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 490 - 591
Target Start/End: Complemental strand, 639264 - 639163
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||||||||||||||||||||| ||||||||||||||  | | |||||||| |||||||||||||||||||| | |||||||||||||||||||||||||    
T  639264 ctacattaccctctcttgtttatagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatatataggtaacattaaatgtcaaataaatga 639165  T
Q  590 gt 591  Q
    ||    
T  639164 gt 639163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 490 - 591
Target Start/End: Complemental strand, 825070 - 824969
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||||||||||||||||||||| ||||||||||||||  | | |||||||| |||||||||||||||||||| | |||||||||||||||||||||||||    
T  825070 ctacattaccctctcttgtttatagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatatataggtaacattaaatgtcaaataaatga 824971  T
Q  590 gt 591  Q
    ||    
T  824970 gt 824969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 486 - 591
Target Start/End: Original strand, 15825071 - 15825175
Alignment:
Q  486 ttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataa 585  Q
    ||||||||||||||||||||| |||| ||| || ||||||| || |||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  15825071 ttttctacattaccctctcttatttataggata-tttaccctttcaagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaatgtcaaataa 15825169  T
Q  586 atgagt 591  Q
    ||||||    
T  15825170 atgagt 15825175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 494 - 603
Target Start/End: Complemental strand, 26951350 - 26951243
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtca 593  Q
    |||||||| || ||||||| ||||| ||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  26951350 attaccctatcgtgtttag-gggta-tttacccttttaagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaatgtcaaataaatcagtca 26951253  T
Q  594 atttttctat 603  Q
    ||||||||||    
T  26951252 atttttctat 26951243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 495 - 591
Target Start/End: Complemental strand, 25583812 - 25583716
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||||||||||||||||||||||||||||||  | | |||||||| |||||||||||||||||| | | |||||||||||||||||||||||||||    
T  25583812 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatgagt 25583716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 501 - 595
Target Start/End: Complemental strand, 15825969 - 15825876
Alignment:
Q  501 tctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaat 595  Q
    ||||||||||||||| || ||||||| || |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  15825969 tctcttgtttagaggata-tttaccctttcaagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaatgtcaaataaatgtgtcaat 15825876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 490 - 591
Target Start/End: Original strand, 27911889 - 27911990
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| ||||||||||||||||||||||||||||||||  | | |||||||| |||||||||||||||||| | | |||||||||||||||||| ||||||    
T  27911889 ctacgttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacataggtaacattaaatgtcaaacaaatga 27911988  T
Q  590 gt 591  Q
    ||    
T  27911989 gt 27911990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 490 - 591
Target Start/End: Original strand, 27958308 - 27958409
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| ||||||||||||||||||||||||||||||||  | | |||||||| |||||||||||||||||| | | |||||||||||||||||| ||||||    
T  27958308 ctacgttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacataggtaacattaaatgtcaaacaaatga 27958407  T
Q  590 gt 591  Q
    ||    
T  27958408 gt 27958409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 480 - 599
Target Start/End: Original strand, 3703166 - 3703283
Alignment:
Q  480 taggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtc 579  Q
    ||||||||||||| ||||||||||||| ||||||||||| |||||||  | | ||||||||||||||||||||||||||| |   | |||||||||||||    
T  3703166 taggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaatcaatcaaaatgtaatatacattggcaacattaaatgtc 3703265  T
Q  580 aaataaatgagtcaattttt 599  Q
      ||||||||||||||||||    
T  3703266 --ataaatgagtcaattttt 3703283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 491 - 591
Target Start/End: Complemental strand, 17948708 - 17948608
Alignment:
Q  491 tacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgag 590  Q
    ||||||||||||||||||||||||||||||||| ||  | | |||||||| |||| ||||||||||||| | | ||||||||||||||||||||||||||    
T  17948708 tacattaccctctcttgtttagagggtaatttatcctctcatgatatcaaccaattaaaatgtaatatacataggtaacattaaatgtcaaataaatgag 17948609  T
Q  591 t 591  Q
    |    
T  17948608 t 17948608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 503 - 591
Target Start/End: Complemental strand, 38060964 - 38060876
Alignment:
Q  503 tcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||||||||||||||||||||||  ||| |||||||| |||||||||||||||||| | | |||||||||||||||||||||||||||    
T  38060964 tcttgtttagagggtaatttaccctcttatgatatcaaccaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatgagt 38060876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 483 - 603
Target Start/End: Complemental strand, 38364819 - 38364705
Alignment:
Q  483 gttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaa 582  Q
    ||||||||||||||||  |||||||||||||||||| ||||  | |     ||||||| |||| ||||||||||||| ||||||||||||||||||||||    
T  38364819 gttttttctacattactttctcttgtttagagggta-tttattctt-----atatcaaccaattaaaatgtaatatacaaatgtaacattaaatgtcaaa 38364726  T
Q  583 taaatgagtcaatttttctat 603  Q
    |||||||||||||||||||||    
T  38364725 taaatgagtcaatttttctat 38364705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 489 - 591
Target Start/End: Complemental strand, 17853488 - 17853386
Alignment:
Q  489 tctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatg 588  Q
    ||||| |||||||||||||||||||||||||||||| |  | | |||||||| |||||||||||||||||| | |  |||||||||||||||||||||||    
T  17853488 tctacgttaccctctcttgtttagagggtaatttactctctcatgatatcaaccaatcaaaatgtaatatacatagataacattaaatgtcaaataaatg 17853389  T
Q  589 agt 591  Q
    |||    
T  17853388 agt 17853386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 490 - 591
Target Start/End: Complemental strand, 15883628 - 15883527
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| |||| |||||||||||||||||||||||| ||  | | |||||||||||||||||||||||||||   | |||||||||||||||||||||||||    
T  15883628 ctacgttactctctcttgtttagagggtaatttatcctctcatgatatcaatcaatcaaaatgtaatatacctaggtaacattaaatgtcaaataaatga 15883529  T
Q  590 gt 591  Q
    ||    
T  15883528 gt 15883527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 494 - 600
Target Start/End: Complemental strand, 23627577 - 23627472
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtca 593  Q
    ||||||| ||||| |||||||| || |||| || |||||||||||||  ||||||||||||||||| ||||||||| |||||||| | ||||||||||||    
T  23627577 attaccccctcttatttagaggata-tttatccttttaagatatcaacaaatcaaaatgtaatatacaaatgtaacgttaaatgttagataaatgagtca 23627479  T
Q  594 atttttc 600  Q
    |||||||    
T  23627478 atttttc 23627472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 39860016 - 39859902
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||  | | |||||||| |||||||||||||||||| |    ||||||||||||||      
T  39860016 ggttttttctagattaccctctcttgtttagagggt-atttaccctctcatgatatcaaccaatcaaaatgtaatatacattgataacattaaatgtc-- 39859920  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  39859919 ataaatgagtcaattttt 39859902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 503 - 603
Target Start/End: Original strand, 43129357 - 43129458
Alignment:
Q  503 tcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaa-tgtaatat-ataaatgtaacattaaatgtcaaataaatgagtcaatttttc 600  Q
    |||| ||||||||||| ||||| | || |||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  43129357 tcttatttagagggta-tttacgctttcaagatatcaaccaatcaaaaatgtaatattataaatgtaacattaaatgtcaaataaatgattcaatttttc 43129455  T
Q  601 tat 603  Q
    |||    
T  43129456 tat 43129458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 490 - 591
Target Start/End: Complemental strand, 2082485 - 2082384
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| |||| ||||||||| ||||| |||||||||||  | | |||||||||||||||||||||||| || | | |||||||||||||||||||||||||    
T  2082485 ctacgttacgctctcttgtatagagagtaatttaccctctcatgatatcaatcaatcaaaatgtaatgtacataggtaacattaaatgtcaaataaatga 2082386  T
Q  590 gt 591  Q
    ||    
T  2082385 gt 2082384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 490 - 591
Target Start/End: Original strand, 6093190 - 6093290
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| ||||||||||||||||||||||||||| ||    | | ||||||||||||||||||||||||||| | | |||||||||||||||||||||||||    
T  6093190 ctacgttaccctctcttgtttagagggtaatt-actttatcatgatatcaatcaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatga 6093288  T
Q  590 gt 591  Q
    ||    
T  6093289 gt 6093290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 40618564 - 40618448
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| |||||||| |||||||||| |||| ||||||||| | | |||||||| ||||||| |||||||||| |     |||||||||||||||    
T  40618564 ggttttttctagattaccctatcttgtttagggggt-atttaccccctcatgatatcaaccaatcaacatgtaatatacattgacaacattaaatgtcaa 40618466  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  40618465 ataaatgagtcaattttt 40618448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 495 - 591
Target Start/End: Complemental strand, 23347345 - 23347249
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||||||||||||||| ||||||||||| ||  | | |||| |||||||| ||||||||||||| | | |||||||||||||||||||||||||||    
T  23347345 ttaccctctcttgtttaaagggtaatttatcctctcatgataacaatcaattaaaatgtaatatacataggtaacattaaatgtcaaataaatgagt 23347249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 480 - 599
Target Start/End: Original strand, 26965362 - 26965479
Alignment:
Q  480 taggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtc 579  Q
    ||||||||||||| ||||||||||||| ||||||||||| |||||||  | | |||||||| |||||||||||||||||| |     |||||||||||||    
T  26965362 taggttttttctaaattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattgacaacattaaatgtc 26965461  T
Q  580 aaataaatgagtcaattttt 599  Q
      ||||||||||||||||||    
T  26965462 --ataaatgagtcaattttt 26965479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 495 - 591
Target Start/End: Original strand, 44255966 - 44256062
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    |||||||||||| |||||||| ||||||||||  | | |||||||| |||| ||||||||||||||| | |||||||||||||||| ||||||||||    
T  44255966 ttaccctctcttatttagaggataatttaccctctcatgatatcaaccaattaaaatgtaatatatataggtaacattaaatgtcatataaatgagt 44256062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 482 - 599
Target Start/End: Original strand, 17946583 - 17946698
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgt-aacattaaatgtca 580  Q
    ||||||||||| ||||||||||||| ||||||||||| |||||||  | | |||||||| |||| |||||||||||||| | ||| |||||||||||||     
T  17946583 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaattaaaatgtaatatat-attgtcaacattaaatgtc- 17946680  T
Q  581 aataaatgagtcaattttt 599  Q
     ||||||||||||||||||    
T  17946681 -ataaatgagtcaattttt 17946698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 489 - 599
Target Start/End: Original strand, 39068838 - 39068945
Alignment:
Q  489 tctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatg 588  Q
    |||| ||||||||||||||||||| ||||| |||   ||||| |  |||||| |||||||||||||||||| |||| ||| |||||||||||||||||||    
T  39068838 tctagattaccctctcttgtttag-gggtatttttatcctttca--tatcaaccaatcaaaatgtaatatacaaatataatattaaatgtcaaataaatg 39068934  T
Q  589 agtcaattttt 599  Q
    |||||||||||    
T  39068935 agtcaattttt 39068945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 484 - 602
Target Start/End: Original strand, 45407245 - 45407360
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    ||||||||| |||| |||||||||||||||||||| |||||||||| | |||||||| |||||||||||||||||| |      ||||||||||||  ||    
T  45407245 ttttttctagattatcctctcttgtttagagggta-tttaccccttcatgatatcaaccaatcaaaatgtaatatacattgacgacattaaatgtc--at 45407341  T
Q  584 aaatgagtcaatttttcta 602  Q
    |||||||||||||||||||    
T  45407342 aaatgagtcaatttttcta 45407360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 278801 - 278686
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| ||||||||||| | ||||||||||| |||||||  | | |||||||| |||||||||||||||||| |   | |||||||||||||      
T  278801 ggttttttctagattaccctctcatatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtc-- 278704  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  278703 ataaatgagtcaattttt 278686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 482 - 599
Target Start/End: Original strand, 637051 - 637166
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| ||||||||||| | ||||||||||| |||||||  | | |||||||| |||||||||||||||||| |   | |||||||||||||      
T  637051 ggttttttctagattaccctctcatatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtc-- 637148  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  637149 ataaatgagtcaattttt 637166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 482 - 599
Target Start/End: Original strand, 822854 - 822969
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| ||||||||||| | ||||||||||| |||||||  | | |||||||| |||||||||||||||||| |   | |||||||||||||      
T  822854 ggttttttctagattaccctctcatatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtc-- 822951  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  822952 ataaatgagtcaattttt 822969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 501 - 595
Target Start/End: Complemental strand, 17779513 - 17779420
Alignment:
Q  501 tctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaat 595  Q
    |||||||||||  ||||| |||| || || |||||||||| |||||||||| || |||| |||||||||||||||||||||||||||||||||||    
T  17779513 tctcttgtttacggggta-tttatcctttcaagatatcaaccaatcaaaatatattataaaaatgtaacattaaatgtcaaataaatgagtcaat 17779420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 18957474 - 18957359
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| ||||||||||||| ||||||||||| |||||||  | | ||||||||||||||||||||||||||| |   | |||||||||| ||      
T  18957474 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaatcaatcaaaatgtaatatacattggcaacattaaatatc-- 18957377  T
Q  582 ataaatgagtcaattttt 599  Q
    |||||||||| |||||||    
T  18957376 ataaatgagttaattttt 18957359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 490 - 591
Target Start/End: Original strand, 3846507 - 3846607
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| |||| |||||||||||||||||||||| ||||  | | ||||| || |||||||||||||||||| | | |||||||||||||||||||||||||    
T  3846507 ctacgttacactctcttgtttagagggtaatt-accctctcatgatataaaccaatcaaaatgtaatatagataggtaacattaaatgtcaaataaatga 3846605  T
Q  590 gt 591  Q
    ||    
T  3846606 gt 3846607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 484 - 599
Target Start/End: Original strand, 15881233 - 15881346
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    |||||| || ||||| ||||||| ||||||||||| |||||||  ||| |||||||| |||||||||||||||||| |   |||||||||||||||  ||    
T  15881233 ttttttttagattactctctcttatttagagggtattttaccctcttatgatatcaaccaatcaaaatgtaatatacattggtaacattaaatgtc--at 15881330  T
Q  584 aaatgagtcaattttt 599  Q
    |||| |||||||||||    
T  15881331 aaataagtcaattttt 15881346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 480 - 599
Target Start/End: Complemental strand, 16097684 - 16097567
Alignment:
Q  480 taggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtc 579  Q
    ||||||||||||| ||||||||||||| ||||||||||| |||||||  | | |||||||| |||||||||||||||||| |   | |||||||||||||    
T  16097684 taggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtc 16097585  T
Q  580 aaataaatgagtcaattttt 599  Q
       ||||||||||| |||||    
T  16097584 --gtaaatgagtcatttttt 16097567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 495 - 591
Target Start/End: Original strand, 18955106 - 18955202
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    |||| |||||||| ||||||||||||||| ||  | | |||||||| ||||||||||||| |||| | | |||||||||||||||||||||||||||    
T  18955106 ttacactctcttgcttagagggtaatttatcctctcatgatatcaaccaatcaaaatgtactatacataggtaacattaaatgtcaaataaatgagt 18955202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 484 - 599
Target Start/End: Original strand, 30475974 - 30476087
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    ||||||||| |||||||||||||||||| |||||| |||||||  ||| |||||||| ||||||| |||||||||| |   | |||||||||| ||  ||    
T  30475974 ttttttctagattaccctctcttgtttatagggtattttaccctcttatgatatcaaccaatcaagatgtaatatacattggcaacattaaatatc--at 30476071  T
Q  584 aaatgagtcaattttt 599  Q
    ||||||||||||||||    
T  30476072 aaatgagtcaattttt 30476087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 499 - 591
Target Start/End: Original strand, 39857874 - 39857966
Alignment:
Q  499 cctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||||||||||| ||||||||||||||  | | |||||||| |||||||||| ||||||| | |  ||||||||||||||||||||||||||    
T  39857874 cctctcttgtttatagggtaatttaccctctcatgatatcaaccaatcaaaatataatatacatagataacattaaatgtcaaataaatgagt 39857966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 480 - 599
Target Start/End: Original strand, 41182398 - 41182515
Alignment:
Q  480 taggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtc 579  Q
    ||||||||||||| |||| |||||||| ||||||||||| |||||||  | | ||||||||  ||||||||||||||||| |   | |||||||||||||    
T  41182398 taggttttttctagattatcctctcttatttagagggtattttaccctctcatgatatcaacaaatcaaaatgtaatatacattggcaacattaaatgtc 41182497  T
Q  580 aaataaatgagtcaattttt 599  Q
      ||||||||||||||||||    
T  41182498 --ataaatgagtcaattttt 41182515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 484 - 599
Target Start/End: Complemental strand, 38099331 - 38099217
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatg--taacattaaatgtcaa 581  Q
    ||||||||| ||||||||||||||||||||||||| |||| ||  |||  |||||||||||||||||||||| |||||||||   ||||||||| ||       
T  38099331 ttttttctaaattaccctctcttgtttagagggtattttatcctcttataatatcaatcaatcaaaatgtaa-atataaatggacaacattaaacgt--t 38099235  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  38099234 ataaatgagtcaattttt 38099217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 482 - 599
Target Start/End: Original strand, 23345171 - 23345286
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| ||||||||||||| ||||||||||| |||| ||  | | |||||||| |||||||||||||||||| |  |  ||||||||||| |      
T  23345171 ggttttttctagattaccctctcttatttagagggtattttatcctctcatgatatcaaccaatcaaaatgtaatatacatttacaacattaaatggc-- 23345268  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  23345269 ataaatgagtcaattttt 23345286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 484 - 600
Target Start/End: Original strand, 38576588 - 38576701
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    ||||||||| |||||||||||||||||||||||| ||||||||  | | |||||||| |||||||||||||||||| |     |||||||||||||  ||    
T  38576588 ttttttctagattaccctctcttgtttagagggt-atttaccctctcatgatatcaaccaatcaaaatgtaatatacatcgacaacattaaatgtc--at 38576684  T
Q  584 aaatgagtcaatttttc 600  Q
    |||| ||||||||||||    
T  38576685 aaataagtcaatttttc 38576701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 42647373 - 42647259
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgt-aacattaaatgtca 580  Q
    |||||||| || |||||||||| |||||||||||||| |||||||||| | |||||||| |||||||||| |||||||  | ||| | |||||||||||     
T  42647373 ggttttttttagattaccctctattgtttagagggta-tttaccccttcatgatatcaaccaatcaaaatataatata-cattgtcagcattaaatgtc- 42647277  T
Q  581 aataaatgagtcaattttt 599  Q
     ||||||||||||||||||    
T  42647276 -ataaatgagtcaattttt 42647259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 482 - 599
Target Start/End: Original strand, 2081366 - 2081481
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| |||||||| |||| ||||||| ||| ||||||   | | |||||||| |||||||||||||||||| |   | |||||||||||||      
T  2081366 ggttttttctagattaccctatcttatttagagtgtattttaccttatcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtc-- 2081463  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  2081464 ataaatgagtcaattttt 2081481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 552 - 602
Target Start/End: Complemental strand, 29726629 - 29726579
Alignment:
Q  552 gtaatatataaatgtaacattaaatgtcaaataaatgagtcaatttttcta 602  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  29726629 gtaatatacaaatgtaatattaaatgtcaaataaatgagtcaatttttcta 29726579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 533 - 591
Target Start/End: Complemental strand, 40304570 - 40304512
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    |||||||| |||||||||||||||||| | |||||||||||||| ||||||||||||||    
T  40304570 gatatcaaccaatcaaaatgtaatatacatatgtaacattaaatatcaaataaatgagt 40304512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 484 - 596
Target Start/End: Original strand, 4621484 - 4621594
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    ||||||||| |||||||| |||| ||||||||||| |||||||  | | |||||||| |||||||||||||||||| |     |||||||||||||  ||    
T  4621484 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattgacaacattaaatgtc--at 4621581  T
Q  584 aaatgagtcaatt 596  Q
    |||||||||||||    
T  4621582 aaatgagtcaatt 4621594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 506 - 599
Target Start/End: Complemental strand, 18089560 - 18089468
Alignment:
Q  506 tgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaattttt 599  Q
    |||||||||||||||| |||| || | |||||||| |||| ||||| ||||||| | |   |||||||||||||||||||||||||||||||||    
T  18089560 tgtttagagggtaatt-accctttcatgatatcaaccaattaaaatataatatacatagacaacattaaatgtcaaataaatgagtcaattttt 18089468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 490 - 591
Target Start/End: Original strand, 41544844 - 41544944
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| ||||||| ||||||||||| |||||||  || ||  | |||||||| |||||||||||||||||||| | |||||||||||| | ||||||||||    
T  41544844 ctacgttaccctatcttgtttagatggtaattatcctctc-atgatatcaaccaatcaaaatgtaatatatataagtaacattaaatattaaataaatga 41544942  T
Q  590 gt 591  Q
    ||    
T  41544943 gt 41544944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 480 - 596
Target Start/End: Complemental strand, 30112251 - 30112137
Alignment:
Q  480 taggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtc 579  Q
    ||||||||||||| || |||||||||||||||| | ||| |||||||  | | ||||||||||||||||||||||||||  |     |||||||||||||    
T  30112251 taggttttttctagatgaccctctcttgtttagggagta-tttaccctctcatgatatcaatcaatcaaaatgtaatatccattgacaacattaaatgtc 30112153  T
Q  580 aaataaatgagtcaatt 596  Q
     ||||||||||||||||    
T  30112152 -aataaatgagtcaatt 30112137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 495 - 591
Target Start/End: Complemental strand, 45409349 - 45409254
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    |||| ||||||| |||| ||||||||| ||||  | | |||||||| |||||||||||||||||| | | ||||||| |||||||||||||||||||    
T  45409349 ttacactctcttatttatagggtaatt-accctctcatgatatcaaccaatcaaaatgtaatatacataagtaacatgaaatgtcaaataaatgagt 45409254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 533 - 591
Target Start/End: Original strand, 16095817 - 16095875
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    |||||||| |||||||||| ||||||| | | |||||||||||||||||||||||||||    
T  16095817 gatatcaaccaatcaaaatataatatacataggtaacattaaatgtcaaataaatgagt 16095875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 533 - 591
Target Start/End: Complemental strand, 30556848 - 30556790
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||||||||||||||||||||||||| |   |||||||||||| ||||||||||||||    
T  30556848 gatatcaatcaatcaaaatgtaatatacatgggtaacattaaatatcaaataaatgagt 30556790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 482 - 599
Target Start/End: Original strand, 38059243 - 38059358
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    |||||||| || ||||||||||||| ||||||||||| |||||||  | | |||||||| |||||||||| ||||||| |     |||||||||||||      
T  38059243 ggttttttttagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatataatatacattgacaacattaaatgtc-- 38059340  T
Q  582 ataaatgagtcaattttt 599  Q
    || |||||||||||||||    
T  38059341 atcaatgagtcaattttt 38059358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 481 - 559
Target Start/End: Original strand, 40302413 - 40302490
Alignment:
Q  481 aggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatata 559  Q
    |||||||||||| ||||  |||||||||||||||||| ||||||||  | | |||||||| ||||||||||||||||||    
T  40302413 aggttttttctatattattctctcttgtttagagggt-atttaccctctcatgatatcaaccaatcaaaatgtaatata 40302490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 533 - 591
Target Start/End: Original strand, 42734691 - 42734749
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||| || |||||||||||||||||||| | |||| ||||||||||||||||||||||    
T  42734691 gatataaaccaatcaaaatgtaatatatataagtaatattaaatgtcaaataaatgagt 42734749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 562 - 603
Target Start/End: Original strand, 31640186 - 31640227
Alignment:
Q  562 aatgtaacattaaatgtcaaataaatgagtcaatttttctat 603  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  31640186 aatgtaacattaaatatcaaataaatgagtcaatttttctat 31640227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 535 - 599
Target Start/End: Original strand, 5586797 - 5586861
Alignment:
Q  535 tatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaattttt 599  Q
    |||||| ||||||||||||||||||   || ||| ||||||||| ||||||||||||||||||||    
T  5586797 tatcaaccaatcaaaatgtaatatacgtatataatattaaatgttaaataaatgagtcaattttt 5586861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 599
Target Start/End: Complemental strand, 6096898 - 6096786
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    ||||||||| ||||||||||||| |||||||| | ||||||||  | |  ||||||| |||||||||||||||||| |     |||||||||||||  ||    
T  6096898 ttttttctagattaccctctcttatttagaggat-atttaccctctcataatatcaaccaatcaaaatgtaatatacattaacaacattaaatgtc--at 6096802  T
Q  584 aaatgagtcaattttt 599  Q
    ||||||||||||||||    
T  6096801 aaatgagtcaattttt 6096786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 482 - 558
Target Start/End: Original strand, 17852389 - 17852465
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatat 558  Q
    ||||||||||| ||||||||||| | ||||||||||| ||||| |  | | |||||||| |||||||||||||||||    
T  17852389 ggttttttctagattaccctctcatatttagagggtattttactctctcatgatatcaaccaatcaaaatgtaatat 17852465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 533 - 589
Target Start/End: Complemental strand, 43695338 - 43695282
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    ||||||||  ||||||||||||||||| | | |||||||||||||||||||||||||    
T  43695338 gatatcaactaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatga 43695282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 533 - 591
Target Start/End: Complemental strand, 3705293 - 3705235
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    |||||||| |||| ||||||||||||| | | |||||||||||||| ||||||||||||    
T  3705293 gatatcaaccaattaaaatgtaatatacataggtaacattaaatgttaaataaatgagt 3705235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 483 - 561
Target Start/End: Complemental strand, 5588179 - 5588101
Alignment:
Q  483 gttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatata 561  Q
    ||||||| || ||||| |||||||| |||  |||| ||||||||| | | |||||||| ||||||||||||||||||||    
T  5588179 gttttttttagattactctctcttgattaaggggtgatttaccccctcatgatatcaaccaatcaaaatgtaatatata 5588101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 561 - 603
Target Start/End: Complemental strand, 26920568 - 26920526
Alignment:
Q  561 aaatgtaacattaaatgtcaaataaatgagtcaatttttctat 603  Q
    |||||||| |||||||||||||||||| |||||||||||||||    
T  26920568 aaatgtaatattaaatgtcaaataaataagtcaatttttctat 26920526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 533 - 589
Target Start/End: Complemental strand, 13141466 - 13141410
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||||||| |||||||||| ||||||| | | ||||||||||||||| |||||||||    
T  13141466 gatatcaaccaatcaaaatataatatacataggtaacattaaatgtccaataaatga 13141410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 490 - 589
Target Start/End: Complemental strand, 38577256 - 38577159
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| ||||||||| || |||||||||||||| || |  | | |||||||| || ||||||||||||||| | | |||| ||||||||||||||||||||    
T  38577256 ctacgttaccctcttttatttagagggtaatt-actctctcatgatatcaaccattcaaaatgtaatatacata-gtaatattaaatgtcaaataaatga 38577159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 533 - 591
Target Start/End: Original strand, 38097929 - 38097987
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||| || ||||||||||||| |||| | | |||| ||||||||||||||||||||||    
T  38097929 gatataaaccaatcaaaatgtagtatacataagtaatattaaatgtcaaataaatgagt 38097987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 567 - 599
Target Start/End: Complemental strand, 5588055 - 5588023
Alignment:
Q  567 aacattaaatgtcaaataaatgagtcaattttt 599  Q
    |||||| ||||||||||||||||||||||||||    
T  5588055 aacattcaatgtcaaataaatgagtcaattttt 5588023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 567 - 599
Target Start/End: Complemental strand, 28085960 - 28085928
Alignment:
Q  567 aacattaaatgtcaaataaatgagtcaattttt 599  Q
    ||||||||||||||||||||||| |||||||||    
T  28085960 aacattaaatgtcaaataaatgaatcaattttt 28085928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 1e-39; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 480 - 603
Target Start/End: Original strand, 24158985 - 24159107
Alignment:
Q  480 taggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtc 579  Q
    |||||||||||||||||||||||| |||||||| ||||| ||||||||||  ||||||||| |||||||||| ||||||| || ||||||||||||||||    
T  24158985 taggttttttctacattaccctcttttgtttagggggta-tttaccccttctagatatcaaccaatcaaaatataatatacaattgtaacattaaatgtc 24159083  T
Q  580 aaataaatgagtcaatttttctat 603  Q
    ||||||||||||||||||||||||    
T  24159084 aaataaatgagtcaatttttctat 24159107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 482 - 599
Target Start/End: Original strand, 12782975 - 12783092
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||||||||||||||||| ||||| |||  ||||| ||||| || ||||||||||| |||||||||||||| |||||||||||||||||||||    
T  12782975 ggttttttctacattaccctctcttatttaggggggtatttatcccttcaatatatcaatcaaccaaaatgtaatatacaaatgtaacattaaatgtcaa 12783074  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  12783075 ataaatgagtcaattttt 12783092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 484 - 599
Target Start/End: Complemental strand, 5090434 - 5090320
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    |||||||||||||||||||||||||| |  ||||| |||||||||| |||||||||| |||||||||||||||| | |||||||||||||||||||||||    
T  5090434 ttttttctacattaccctctcttgttcaaggggta-tttaccccttcaagatatcaaccaatcaaaatgtaataaacaaatgtaacattaaatgtcaaat 5090336  T
Q  584 aaatgagtcaattttt 599  Q
    ||||||||||||||||    
T  5090335 aaatgagtcaattttt 5090320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 482 - 599
Target Start/End: Original strand, 13866014 - 13866128
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| |||||||| ||||||||||  |||| ||||||| || |||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  13866014 ggttttttctatattaccctatcttgtttag--ggta-tttacccgttcaagatatcaaccaatcaaaatgtaatatacaaatgtaacattaaatgtcaa 13866110  T
Q  582 ataaatgagtcaattttt 599  Q
    |||||| |||||||||||    
T  13866111 ataaattagtcaattttt 13866128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 483 - 603
Target Start/End: Complemental strand, 34574942 - 34574826
Alignment:
Q  483 gttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaa 582  Q
    |||||||||||| ||||||||||||||| || |||| |||||||||| |||||||||| |||| ||||||||   || ||||||||||||||||||||||    
T  34574942 gttttttctacactaccctctcttgtttggaaggta-tttaccccttcaagatatcaaccaattaaaatgta---tacaaatgtaacattaaatgtcaaa 34574847  T
Q  583 taaatgagtcaatttttctat 603  Q
    |||||||||||||||||||||    
T  34574846 taaatgagtcaatttttctat 34574826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 490 - 591
Target Start/End: Complemental strand, 11837851 - 11837750
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| ||||||||||||||||||||||||||||||||  | | |||||||| |||||||||||||||||| | | |||||||||||||||||||||||||    
T  11837851 ctacgttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatga 11837752  T
Q  590 gt 591  Q
    ||    
T  11837751 gt 11837750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 490 - 591
Target Start/End: Original strand, 23580086 - 23580187
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| ||||||||||||||||||||||||||||||||  | | |||||||| |||||||||||||||||| | | |||||||||||||||||||||||||    
T  23580086 ctaccttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacataggtaacattaaatgtcaaataaatga 23580185  T
Q  590 gt 591  Q
    ||    
T  23580186 gt 23580187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 490 - 591
Target Start/End: Original strand, 14103792 - 14103893
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| ||||||||||||||||||||||||||||||||  | | |||||||| |||||||||||||||||| | |  ||||||||||||||||||||||||    
T  14103792 ctacgttaccctctcttgtttagagggtaatttaccctctcacgatatcaaccaatcaaaatgtaatatacatagataacattaaatgtcaaataaatga 14103891  T
Q  590 gt 591  Q
    ||    
T  14103892 gt 14103893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 495 - 591
Target Start/End: Original strand, 27782272 - 27782368
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||||||||||||||||||||||||||||||  | | |||||||| |||||||||||||||||| | | |||| ||||||||||||||||||||||    
T  27782272 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacataggtaatattaaatgtcaaataaatgagt 27782368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 14106008 - 14105893
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| ||||||||||||| ||||||||||| |||||||  ||| |||||||| |||||||||||||||||| |   | |||||||||||||      
T  14106008 ggttttttctagattaccctctcttatttagagggtattttaccctcttatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtc-- 14105911  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  14105910 ataaatgagtcaattttt 14105893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 521 - 603
Target Start/End: Complemental strand, 32562722 - 32562640
Alignment:
Q  521 ttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaatttttctat 603  Q
    |||||| || ||||||| || |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  32562722 ttaccctttcaagatattaaccaatcaaaatataatatacaaatgtaacattaaatgtcaaataaatgagtcaatttttctat 32562640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 494 - 603
Target Start/End: Original strand, 5088595 - 5088701
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtca 593  Q
    ||||| ||||||||||||| ||||| ||||||  ||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||  |||||    
T  5088595 attactctctcttgtttag-gggta-tttacctttttaa-atattaatcaatcaaaatgtaatatacaaatgtaacattaaatgtcaaataaagaagtca 5088691  T
Q  594 atttttctat 603  Q
    ||||||||||    
T  5088692 atttttctat 5088701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 490 - 591
Target Start/End: Complemental strand, 17551081 - 17550980
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| ||||||||||||||||| ||||||||||||||  | | |||||||| |||||||||||||||||| | | |||||||||||||||| ||||||||    
T  17551081 ctacgttaccctctcttgtttaaagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacataggtaacattaaatgtcagataaatga 17550982  T
Q  590 gt 591  Q
    ||    
T  17550981 gt 17550980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 489 - 587
Target Start/End: Complemental strand, 4590076 - 4589978
Alignment:
Q  489 tctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaat 587  Q
    ||||| |||||||||||| |||||||||||||||| ||  | | |||||||||||||| |||||||||||| | | |||||||||||||||||||||||    
T  4590076 tctacgttaccctctcttatttagagggtaatttatcctctcatgatatcaatcaatccaaatgtaatatacataggtaacattaaatgtcaaataaat 4589978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 16922318 - 16922203
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| ||||||||||||| ||||||||||| |||||||  | | |||||||| |||||||||||||||||| |   | |||||||||||||      
T  16922318 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtc-- 16922221  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  16922220 ataaatgagtcaattttt 16922203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 481 - 599
Target Start/End: Original strand, 4587860 - 4587976
Alignment:
Q  481 aggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtca 580  Q
    |||||||||||| ||||||||||||| |||||||| || |||||||  | | |||||||| |||| |||||||||||||||   | |||||||||||||     
T  4587860 aggttttttctagattaccctctcttatttagaggatattttaccctctcatgatatcaaccaattaaaatgtaatatatattggcaacattaaatgtc- 4587958  T
Q  581 aataaatgagtcaattttt 599  Q
     ||||||||||||||||||    
T  4587959 -ataaatgagtcaattttt 4587976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 489 - 599
Target Start/End: Original strand, 8634486 - 8634595
Alignment:
Q  489 tctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatg 588  Q
    ||||||||||||||||||| |||| || |||||||| | || | ||||||||||||||||||||||||||  | | ||||| |||||| |||||||||||    
T  8634486 tctacattaccctctcttgattaggggataatttacgc-ttcatgatatcaatcaatcaaaatgtaatattaataggtaacgttaaatatcaaataaatg 8634584  T
Q  589 agtcaattttt 599  Q
    || ||||||||    
T  8634585 agccaattttt 8634595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 482 - 599
Target Start/End: Original strand, 17557572 - 17557687
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| ||||||||||||| ||||||||||| |||||||  | | |||||||| |||||||||||||||||| |   | |||||||||||||      
T  17557572 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtc-- 17557669  T
Q  582 ataaatgagtcaattttt 599  Q
    |||||||||| |||||||    
T  17557670 ataaatgagttaattttt 17557687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 490 - 599
Target Start/End: Original strand, 24082999 - 24083107
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| |||||||||||| |||||||||||||| ||||  | | |||||||| |||||| ||||||||||| | | | |||||||||||||||||||||||    
T  24082999 ctacgttaccctctcttatttagagggtaatt-accctctcatgatatcaaccaatcataatgtaatatacataggcaacattaaatgtcaaataaatga 24083097  T
Q  590 gtcaattttt 599  Q
     |||||||||    
T  24083098 atcaattttt 24083107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 494 - 591
Target Start/End: Original strand, 28578430 - 28578526
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||||||||||| |||||||||||||| || |  | |  ||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||    
T  28578430 attaccctctcttctttagagggtaatt-actctctcattatatcaaccaatcaaaatgtaatatacatatgtaacattaaatgtcaaataaatgagt 28578526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 484 - 599
Target Start/End: Original strand, 953654 - 953767
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    ||||||||| ||||| || | ||||||||||||||||||||||  | | |||||||| |||||||||||||||||| |   | |||||||||||||  ||    
T  953654 ttttttctagattactctattttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtc--at 953751  T
Q  584 aaatgagtcaattttt 599  Q
    ||||||||||||||||    
T  953752 aaatgagtcaattttt 953767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 495 - 591
Target Start/End: Original strand, 27438218 - 27438313
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||||||||||||||||||||||||||| |   | | |||||||| |||||||||||||||||| |   || ||||||||||||||||||||||||    
T  27438218 ttaccctctcttgtttagagggtaatttatcttctcatgatatcaaccaatcaaaatgtaatatacatgggt-acattaaatgtcaaataaatgagt 27438313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 500 - 599
Target Start/End: Original strand, 15287474 - 15287572
Alignment:
Q  500 ctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaattttt 599  Q
    ||||||||||||| | ||| ||||| || | | |||||||| |||||||||||||||||| |    ||||||||||||||||||||||||||||||||||    
T  15287474 ctctcttgtttagggagta-tttactccctcatgatatcaaccaatcaaaatgtaatatacattgataacattaaatgtcaaataaatgagtcaattttt 15287572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 533 - 591
Target Start/End: Complemental strand, 955806 - 955748
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||| || |||||||||||||||||||| | |||||||||||||||||||||||||||    
T  955806 gatattaaccaatcaaaatgtaatatatataggtaacattaaatgtcaaataaatgagt 955748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 23582283 - 23582168
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| ||||||||||||| ||||||||||| |||||||  | | || ||||| |||| ||||||||||||| |     |||||||||||||      
T  23582283 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgacatcaaccaattaaaatgtaatatacattgacaacattaaatgtc-- 23582186  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  23582185 ataaatgagtcaattttt 23582168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 27784495 - 27784380
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    |||||||| || ||||||||||||| ||||||||||| |||||||  | | |||||||| |||| ||||||||||||| |     |||||||||||||      
T  27784495 ggttttttttagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaataaaaatgtaatatacattgacaacattaaatgtc-- 27784398  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  27784397 ataaatgagtcaattttt 27784380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 483 - 599
Target Start/End: Original strand, 5686338 - 5686451
Alignment:
Q  483 gttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaa 582  Q
    |||||||||| |||||||||| |||||||||||||| |||  | ||  | |||||||| ||||||||||||||||||||    ||| ||||||||||  |    
T  5686338 gttttttctagattaccctcttttgtttagagggtattttctctctc-atgatatcaaccaatcaaaatgtaatatatattgttaatattaaatgtc--a 5686434  T
Q  583 taaatgagtcaattttt 599  Q
    |||||||||||||||||    
T  5686435 taaatgagtcaattttt 5686451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 490 - 591
Target Start/End: Complemental strand, 11154887 - 11154786
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| ||||||| |||| |||| ||||||||||| ||  | | |||||||| |||||||||||||||||| | |  ||| ||||||||||||||||||||    
T  11154887 ctacgttaccctttcttatttaaagggtaatttagcctctcatgatatcaaccaatcaaaatgtaatatacatagataatattaaatgtcaaataaatga 11154788  T
Q  590 gt 591  Q
    ||    
T  11154787 gt 11154786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 503 - 591
Target Start/End: Original strand, 25109367 - 25109456
Alignment:
Q  503 tcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaat--gtaacattaaatgtcaaataaatgagt 591  Q
    ||||||||||||||||||| ||||  | | |||||||| |||||||||||||||||||| ||  |||||||||||  ||||||||||||||    
T  25109367 tcttgtttagagggtaatt-accctctcatgatatcaaccaatcaaaatgtaatatatacataggtaacattaaacatcaaataaatgagt 25109456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 536 - 597
Target Start/End: Complemental strand, 21861420 - 21861359
Alignment:
Q  536 atcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaattt 597  Q
    ||||| |||||||||||||||||| | ||  ||||||||||||||||||||||||| |||||    
T  21861420 atcaaccaatcaaaatgtaatatacacatacaacattaaatgtcaaataaatgagttaattt 21861359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 543 - 599
Target Start/End: Original strand, 16918299 - 16918355
Alignment:
Q  543 aatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaattttt 599  Q
    ||||||||||||||||| | | ||||||||||| ||||||||||| ||| |||||||    
T  16918299 aatcaaaatgtaatatacataagtaacattaaaagtcaaataaataagtaaattttt 16918355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 534 - 584
Target Start/End: Complemental strand, 24178604 - 24178554
Alignment:
Q  534 atatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaata 584  Q
    |||||||  ||||||||||||||||| | | ||||||||||||||||||||    
T  24178604 atatcaactaatcaaaatgtaatatacataagtaacattaaatgtcaaata 24178554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 485 - 559
Target Start/End: Complemental strand, 28581025 - 28580952
Alignment:
Q  485 tttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatata 559  Q
    ||||| || |||||||||||||||||||||||| ||||| ||  | | ||||| || ||||||||||||||||||    
T  28581025 tttttttagattaccctctcttgtttagagggt-atttatcctctcatgatataaaccaatcaaaatgtaatata 28580952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 78; Significance: 6e-36; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 494 - 603
Target Start/End: Complemental strand, 94744 - 94636
Alignment:
Q  494 attaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtca 593  Q
    ||||| ||||||||||||||||||| ||||||  || ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  94744 attactctctcttgtttagagggta-tttaccatttcaagatatcaatcaatcaaaatgtaatatacaaatgtaatattaaatgtcaaataaatgagtca 94646  T
Q  594 atttttctat 603  Q
    ||||||||||    
T  94645 atttttctat 94636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 76; Significance: 9e-35; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 484 - 599
Target Start/End: Complemental strand, 71900 - 71786
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    |||||||||||||| |||||||||||||| || || ||||||| || ||||||||||||||||||||||||||||| || ||||||||||||| ||||||    
T  71900 ttttttctacattatcctctcttgtttaggggata-tttaccctttcaagatatcaatcaatcaaaatgtaatataaaattgtaacattaaatttcaaat 71802  T
Q  584 aaatgagtcaattttt 599  Q
    ||||||||||||||||    
T  71801 aaatgagtcaattttt 71786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 561 - 599
Target Start/End: Original strand, 69524 - 69562
Alignment:
Q  561 aaatgtaacattaaatgtcaaataaatgagtcaattttt 599  Q
    |||||||||||||||||||||||||||||||||||||||    
T  69524 aaatgtaacattaaatgtcaaataaatgagtcaattttt 69562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 64; Significance: 1e-27; HSPs: 2)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 481 - 599
Target Start/End: Original strand, 3859 - 3974
Alignment:
Q  481 aggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtca 580  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||| |     |||||||||||||     
T  3859 aggttttttctagattaccctctcttgtttagagggt-atttaccccttcatgatatcaatcaatcaaaatgtaatatacattgacaacattaaatgtc- 3956  T
Q  581 aataaatgagtcaattttt 599  Q
     ||||||||||||||||||    
T  3957 -ataaatgagtcaattttt 3974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 533 - 591
Target Start/End: Complemental strand, 5903 - 5845
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    |||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||    
T  5903 gatatcaaccaatcaaaatgtaatatacatatgtaacattaaatgtcaaataaatgagt 5845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 490 - 591
Target Start/End: Original strand, 20724 - 20825
Alignment:
Q  490 ctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatga 589  Q
    |||| ||||||| ||||||||||||||||||||||||  ||| |||||||| |||||||||||||||||| | | |||| ||||||||||||||||||||    
T  20724 ctacgttaccctatcttgtttagagggtaatttaccctcttatgatatcaaccaatcaaaatgtaatatacataagtaatattaaatgtcaaataaatga 20823  T
Q  590 gt 591  Q
    ||    
T  20824 gt 20825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 484 - 599
Target Start/End: Complemental strand, 30755 - 30642
Alignment:
Q  484 ttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaat 583  Q
    ||||||||| |||||||| |||| ||||||||||| |||||||  | | |||||||| |||| ||||||||||||| |     |||||||||||||  ||    
T  30755 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaataaaaatgtaatatacattgacaacattaaatgtc--at 30658  T
Q  584 aaatgagtcaattttt 599  Q
    ||||||||||||||||    
T  30657 aaatgagtcaattttt 30642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0779 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0779
Description:

Target: scaffold0779; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 217 - 102
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| ||||||||||||| ||||||||||| |||||||  | | |||||||| ||||||||||||||||||||   | |||||||||||||      
T  217 ggttttttctatattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatatattggcaacattaaatgtc-- 120  T
Q  582 ataaatgagtcaattttt 599  Q
    |||||||||| |||||||    
T  119 ataaatgagttaattttt 102  T

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Target: scaffold0006 (Bit Score: 51; Significance: 7e-20; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 56561 - 56446
Alignment:
Q  482 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaa 581  Q
    ||||||||||| ||||||||||||| ||||||||||| |||||||    | |||||||| |||||||||||||||||| |   | |||||||||||||      
T  56561 ggttttttctagattaccctctcttatttagagggtattttaccctcccatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtc-- 56464  T
Q  582 ataaatgagtcaattttt 599  Q
    ||||||||||||||||||    
T  56463 ataaatgagtcaattttt 56446  T

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Target: scaffold0217 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 547 - 603
Target Start/End: Complemental strand, 1546 - 1490
Alignment:
Q  547 aaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaatttttctat 603  Q
    |||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  1546 aaaatgcaatatacaaatgtaatattaaatgtcaaataaatgagtcaatttttctat 1490  T

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Target: scaffold0003 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 495 - 591
Target Start/End: Complemental strand, 49144 - 49049
Alignment:
Q  495 ttaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagt 591  Q
    ||||||||||||||||||||||||||||| |   | | |||||||| |||||||||||||||||| |   || ||||||||||||||||||||||||    
T  49144 ttaccctctcttgtttagagggtaatttatcttctcatgatatcaaccaatcaaaatgtaatatacatgggt-acattaaatgtcaaataaatgagt 49049  T

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Target: scaffold0259 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 533 - 599
Target Start/End: Complemental strand, 6174 - 6108
Alignment:
Q  533 gatatcaatcaatcaaaatgtaatatataaatgtaacattaaatgtcaaataaatgagtcaattttt 599  Q
    |||||||| |||||||||| ||||||| | | | |||||||||||||||||||||||||||||||||    
T  6174 gatatcaaccaatcaaaatttaatatacataggcaacattaaatgtcaaataaatgagtcaattttt 6108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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