View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: F9335-LTR4-TNT-insertion-8 (Length: 651)

Name: F9335-LTR4-TNT-insertion-8
Description: F9335-LTR4
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] F9335-LTR4-TNT-insertion-8
F9335-LTR4-TNT-insertion-8
[»] chr4 (84 HSPs)
chr4 (6-651)||(19848908-19849553)
chr4 (144-371)||(44855208-44855433)
chr4 (140-371)||(30022031-30022256)
chr4 (173-340)||(24259602-24259771)
chr4 (173-374)||(22212332-22212533)
chr4 (171-298)||(31987293-31987420)
chr4 (173-364)||(37445651-37445842)
chr4 (180-408)||(45520384-45520611)
chr4 (158-298)||(31941537-31941676)
chr4 (254-371)||(34360077-34360194)
chr4 (135-298)||(17499751-17499913)
chr4 (233-371)||(34096067-34096205)
chr4 (135-340)||(34124252-34124455)
chr4 (173-371)||(52732590-52732780)
chr4 (254-383)||(54512095-54512224)
chr4 (158-355)||(15501133-15501318)
chr4 (173-298)||(45889555-45889681)
chr4 (255-417)||(31817116-31817279)
chr4 (163-294)||(47321125-47321259)
chr4 (173-298)||(28116236-28116363)
chr4 (134-296)||(51434293-51434453)
chr4 (173-298)||(29289927-29290051)
chr4 (186-298)||(30492732-30492845)
chr4 (173-297)||(35928482-35928604)
chr4 (233-417)||(38761743-38761925)
chr4 (173-298)||(54091949-54092074)
chr4 (255-371)||(51930649-51930765)
chr4 (140-298)||(19282443-19282602)
chr4 (173-275)||(29840066-29840169)
chr4 (173-298)||(6462000-6462132)
chr4 (255-369)||(50072330-50072438)
chr4 (176-371)||(36805413-36805601)
chr4 (232-355)||(42672439-42672562)
chr4 (177-408)||(6510113-6510343)
chr4 (257-371)||(39671069-39671183)
chr4 (184-420)||(11835109-11835342)
chr4 (153-287)||(17317889-17318022)
chr4 (255-371)||(21045206-21045322)
chr4 (255-371)||(32140949-32141065)
chr4 (140-221)||(56556366-56556444)
chr4 (135-293)||(45903446-45903604)
chr4 (177-371)||(43421087-43421272)
chr4 (234-298)||(45049761-45049825)
chr4 (179-298)||(55126494-55126615)
chr4 (229-298)||(4408211-4408282)
chr4 (600-651)||(12735509-12735560)
chr4 (600-651)||(26424857-26424908)
chr4 (600-651)||(34739358-34739409)
chr4 (600-651)||(45874133-45874184)
chr4 (601-651)||(1174029-1174079)
chr4 (601-651)||(43139906-43139956)
chr4 (601-651)||(53457902-53457952)
chr4 (244-293)||(3093411-3093460)
chr4 (600-649)||(23417482-23417531)
chr4 (601-649)||(28798388-28798436)
chr4 (135-221)||(32141075-32141158)
chr4 (173-279)||(44835328-44835432)
chr4 (600-651)||(238457-238508)
chr4 (600-651)||(12867919-12867970)
chr4 (601-651)||(18257407-18257457)
chr4 (601-651)||(31015060-31015110)
chr4 (256-298)||(38692464-38692506)
chr4 (134-221)||(50072237-50072320)
chr4 (264-298)||(54233900-54233934)
chr4 (135-200)||(40837086-40837151)
chr4 (611-651)||(37134126-37134166)
chr4 (135-221)||(39671194-39671277)
chr4 (600-651)||(52768300-52768350)
chr4 (140-200)||(52848190-52848246)
chr4 (600-651)||(54768431-54768482)
chr4 (255-298)||(56556312-56556355)
chr4 (601-651)||(1966628-1966678)
chr4 (601-651)||(19225337-19225387)
chr4 (601-647)||(33770650-33770696)
chr4 (609-651)||(48822891-48822933)
chr4 (601-647)||(55400310-55400356)
chr4 (602-651)||(12767165-12767214)
chr4 (610-651)||(39807922-39807963)
chr4 (135-200)||(49089421-49089485)
chr4 (602-651)||(55214730-55214779)
chr4 (600-640)||(11278067-11278107)
chr4 (177-221)||(21045151-21045195)
chr4 (615-651)||(44369929-44369965)
chr4 (133-200)||(56555838-56555903)
[»] chr6 (36 HSPs)
chr6 (144-364)||(12828648-12828867)
chr6 (173-374)||(29915535-29915738)
chr6 (173-417)||(29927201-29927446)
chr6 (135-298)||(17345167-17345327)
chr6 (173-298)||(31275674-31275800)
chr6 (184-371)||(26669058-26669245)
chr6 (164-298)||(34576529-34576665)
chr6 (249-413)||(4131866-4132027)
chr6 (144-374)||(23936540-23936765)
chr6 (173-372)||(4123814-4124013)
chr6 (173-298)||(26189502-26189629)
chr6 (173-293)||(11785141-11785259)
chr6 (173-371)||(34439368-34439571)
chr6 (176-298)||(8052342-8052463)
chr6 (173-298)||(10494795-10494920)
chr6 (138-264)||(4132042-4132163)
chr6 (173-293)||(32258716-32258838)
chr6 (177-298)||(30627089-30627210)
chr6 (254-371)||(1924634-1924751)
chr6 (173-293)||(6143078-6143200)
chr6 (177-293)||(6140598-6140715)
chr6 (177-293)||(19689874-19689988)
chr6 (229-298)||(25932679-25932750)
chr6 (600-651)||(4464205-4464256)
chr6 (600-651)||(33621572-33621623)
chr6 (600-651)||(35218639-35218690)
chr6 (600-651)||(21037368-21037419)
chr6 (600-651)||(33704294-33704345)
chr6 (601-651)||(28323010-28323060)
chr6 (601-651)||(28592128-28592178)
chr6 (320-369)||(19689809-19689858)
chr6 (601-651)||(29009650-29009700)
chr6 (601-651)||(32353941-32353991)
chr6 (136-203)||(19416819-19416883)
chr6 (135-200)||(24163846-24163906)
chr6 (177-221)||(1924774-1924818)
[»] chr2 (57 HSPs)
chr2 (173-398)||(4840660-4840885)
chr2 (140-360)||(7743361-7743582)
chr2 (173-371)||(1298740-1298938)
chr2 (135-298)||(2459733-2459894)
chr2 (229-408)||(37106912-37107091)
chr2 (144-298)||(1360145-1360296)
chr2 (177-355)||(24775187-24775365)
chr2 (177-297)||(33093366-33093488)
chr2 (135-340)||(43388648-43388849)
chr2 (135-408)||(43344146-43344412)
chr2 (184-378)||(36360328-36360520)
chr2 (198-333)||(43460792-43460927)
chr2 (135-298)||(4536534-4536690)
chr2 (173-294)||(10580893-10581016)
chr2 (175-297)||(41984414-41984538)
chr2 (255-371)||(34225826-34225942)
chr2 (188-333)||(16316718-16316863)
chr2 (177-378)||(29795152-29795344)
chr2 (173-298)||(775917-776043)
chr2 (180-298)||(39866704-39866824)
chr2 (173-293)||(18374802-18374922)
chr2 (255-361)||(4766182-4766288)
chr2 (254-371)||(40410518-40410635)
chr2 (183-374)||(40987239-40987419)
chr2 (173-298)||(6591959-6592084)
chr2 (229-298)||(25332620-25332691)
chr2 (256-355)||(14378224-14378323)
chr2 (173-355)||(1381744-1381915)
chr2 (135-218)||(45372645-45372725)
chr2 (600-651)||(10639605-10639656)
chr2 (600-651)||(11459793-11459844)
chr2 (600-651)||(34460447-34460498)
chr2 (600-651)||(37197609-37197660)
chr2 (600-651)||(45125164-45125215)
chr2 (173-293)||(4566159-4566281)
chr2 (601-651)||(23839937-23839987)
chr2 (601-651)||(29659218-29659268)
chr2 (601-651)||(33083554-33083604)
chr2 (601-651)||(42578246-42578296)
chr2 (601-651)||(43778468-43778518)
chr2 (234-298)||(14511515-14511579)
chr2 (600-651)||(19537385-19537436)
chr2 (600-651)||(26605702-26605753)
chr2 (601-651)||(19048832-19048882)
chr2 (601-651)||(39831444-39831494)
chr2 (256-294)||(42969967-42970005)
chr2 (173-221)||(34225767-34225815)
chr2 (173-221)||(45148062-45148110)
chr2 (604-651)||(11708756-11708803)
chr2 (140-200)||(12566112-12566169)
chr2 (264-298)||(14698075-14698109)
chr2 (601-651)||(44181887-44181937)
chr2 (180-221)||(14378334-14378375)
chr2 (261-294)||(45148014-45148047)
chr2 (144-221)||(14697981-14698054)
chr2 (361-425)||(29412166-29412230)
chr2 (604-644)||(40825161-40825201)
[»] chr5 (63 HSPs)
chr5 (135-371)||(166609-166841)
chr5 (173-298)||(38982178-38982303)
chr5 (135-374)||(4751487-4751725)
chr5 (135-298)||(34171125-34171283)
chr5 (173-371)||(36660422-36660618)
chr5 (173-298)||(33585006-33585133)
chr5 (173-298)||(42329577-42329704)
chr5 (181-355)||(15400174-15400349)
chr5 (175-374)||(4742223-4742423)
chr5 (173-292)||(13066708-13066827)
chr5 (173-291)||(4371358-4371476)
chr5 (184-371)||(36783361-36783548)
chr5 (135-298)||(4833664-4833825)
chr5 (135-298)||(29653545-29653706)
chr5 (177-298)||(793637-793760)
chr5 (255-383)||(31889796-31889924)
chr5 (173-298)||(33822534-33822661)
chr5 (175-293)||(27810343-27810461)
chr5 (173-298)||(28640077-28640202)
chr5 (173-298)||(39059801-39059925)
chr5 (173-292)||(12992059-12992176)
chr5 (135-417)||(14979965-14980231)
chr5 (171-374)||(17674201-17674396)
chr5 (184-298)||(32690764-32690878)
chr5 (254-371)||(12167570-12167688)
chr5 (180-364)||(43257827-43258002)
chr5 (233-340)||(27652310-27652419)
chr5 (229-297)||(29044770-29044839)
chr5 (173-374)||(31557297-31557493)
chr5 (173-297)||(33741460-33741584)
chr5 (173-298)||(36296165-36296290)
chr5 (254-364)||(16886152-16886255)
chr5 (255-371)||(4011620-4011736)
chr5 (600-651)||(4824938-4824989)
chr5 (276-417)||(4967405-4967546)
chr5 (600-651)||(21018301-21018352)
chr5 (600-651)||(29265953-29266004)
chr5 (600-651)||(31909384-31909435)
chr5 (600-651)||(32143413-32143464)
chr5 (600-651)||(35317696-35317747)
chr5 (244-404)||(1513043-1513205)
chr5 (257-371)||(7388152-7388264)
chr5 (601-649)||(23262624-23262672)
chr5 (600-651)||(13204035-13204086)
chr5 (177-298)||(32963041-32963161)
chr5 (601-651)||(2971062-2971112)
chr5 (258-373)||(8960993-8961107)
chr5 (600-645)||(12257440-12257485)
chr5 (257-294)||(33693810-33693847)
chr5 (306-371)||(34919863-34919928)
chr5 (173-221)||(4011746-4011794)
chr5 (158-220)||(12167693-12167752)
chr5 (173-221)||(31889737-31889785)
chr5 (140-221)||(34919719-34919796)
chr5 (257-293)||(41845344-41845380)
chr5 (604-651)||(40177702-40177749)
chr5 (255-298)||(41566861-41566904)
chr5 (134-200)||(15776610-15776671)
chr5 (135-205)||(4967539-4967605)
chr5 (611-648)||(6021073-6021110)
chr5 (173-221)||(7388291-7388339)
chr5 (173-221)||(7731703-7731751)
chr5 (173-221)||(8961121-8961169)
[»] chr3 (86 HSPs)
chr3 (135-371)||(37225555-37225787)
chr3 (177-371)||(647552-647745)
chr3 (173-409)||(46362932-46363169)
chr3 (173-391)||(38457455-38457673)
chr3 (173-340)||(54933194-54933363)
chr3 (175-371)||(83293-83488)
chr3 (140-383)||(26965456-26965686)
chr3 (140-338)||(44854278-44854475)
chr3 (177-371)||(4391903-4392088)
chr3 (140-298)||(27027698-27027853)
chr3 (140-396)||(19552505-19552750)
chr3 (173-371)||(22730920-22731124)
chr3 (173-371)||(27483153-27483342)
chr3 (173-298)||(2988641-2988767)
chr3 (177-374)||(36771533-36771721)
chr3 (176-298)||(3000750-3000873)
chr3 (173-374)||(25061699-25061889)
chr3 (173-356)||(41287071-41287256)
chr3 (173-298)||(25722492-25722619)
chr3 (177-298)||(32303936-32304059)
chr3 (173-298)||(43169329-43169456)
chr3 (229-399)||(43600122-43600293)
chr3 (144-297)||(44645309-44645459)
chr3 (135-355)||(43580436-43580656)
chr3 (135-340)||(43687872-43688078)
chr3 (173-298)||(15514758-15514884)
chr3 (135-340)||(54261376-54261579)
chr3 (258-383)||(790152-790277)
chr3 (173-298)||(20512527-20512655)
chr3 (198-298)||(35099399-35099499)
chr3 (255-359)||(35239438-35239542)
chr3 (135-371)||(44648370-44648593)
chr3 (134-298)||(49470749-49470911)
chr3 (255-408)||(53716082-53716233)
chr3 (173-355)||(2567988-2568161)
chr3 (231-424)||(5244638-5244830)
chr3 (140-371)||(34059841-34060058)
chr3 (229-298)||(36541542-36541613)
chr3 (173-298)||(51381716-51381846)
chr3 (180-364)||(1340896-1341071)
chr3 (174-298)||(50420255-50420378)
chr3 (136-276)||(42857114-42857252)
chr3 (233-298)||(27039382-27039447)
chr3 (257-371)||(31290934-31291047)
chr3 (173-290)||(36310290-36310408)
chr3 (600-651)||(36228993-36229044)
chr3 (261-360)||(2662463-2662562)
chr3 (229-371)||(22414807-22414946)
chr3 (255-371)||(38165621-38165741)
chr3 (254-298)||(43599863-43599907)
chr3 (600-651)||(3112994-3113045)
chr3 (600-651)||(7824453-7824504)
chr3 (600-651)||(29689481-29689532)
chr3 (600-651)||(43247649-43247700)
chr3 (600-651)||(54158344-54158395)
chr3 (256-298)||(16240654-16240696)
chr3 (600-649)||(51665924-51665973)
chr3 (140-221)||(53715996-53716072)
chr3 (320-408)||(6084750-6084838)
chr3 (229-294)||(53560715-53560782)
chr3 (604-651)||(9349679-9349726)
chr3 (234-298)||(42007093-42007159)
chr3 (600-651)||(42392804-42392855)
chr3 (600-651)||(52500916-52500967)
chr3 (600-651)||(54151680-54151731)
chr3 (601-651)||(4601503-4601553)
chr3 (609-651)||(32001432-32001474)
chr3 (255-293)||(42791380-42791418)
chr3 (609-651)||(55018042-55018084)
chr3 (601-647)||(55320400-55320446)
chr3 (257-294)||(4476397-4476434)
chr3 (135-200)||(33194160-33194220)
chr3 (254-371)||(40048952-40049067)
chr3 (257-294)||(42740302-42740339)
chr3 (600-651)||(28844582-28844634)
chr3 (173-221)||(45095548-45095596)
chr3 (309-355)||(9167665-9167711)
chr3 (205-260)||(52222816-52222871)
chr3 (135-200)||(3152935-3152995)
chr3 (602-651)||(40756728-40756777)
chr3 (601-642)||(47770410-47770451)
chr3 (134-200)||(50038300-50038362)
chr3 (177-221)||(790095-790139)
chr3 (603-651)||(1778929-1778977)
chr3 (177-221)||(13485915-13485959)
chr3 (177-221)||(31291074-31291118)
[»] chr1 (76 HSPs)
chr1 (173-371)||(28751368-28751567)
chr1 (140-382)||(1428832-1429070)
chr1 (135-374)||(12002206-12002441)
chr1 (140-371)||(11650021-11650250)
chr1 (135-417)||(43929644-43929922)
chr1 (177-371)||(5317537-5317731)
chr1 (135-364)||(17919788-17920013)
chr1 (135-394)||(43738191-43738446)
chr1 (144-297)||(15698785-15698936)
chr1 (140-371)||(52403443-52403668)
chr1 (257-404)||(10690882-10691029)
chr1 (140-298)||(26252082-26252239)
chr1 (135-298)||(17806408-17806567)
chr1 (158-422)||(44583751-44584011)
chr1 (173-298)||(254944-255072)
chr1 (182-417)||(2245789-2246025)
chr1 (184-298)||(44582811-44582927)
chr1 (173-333)||(22664933-22665091)
chr1 (184-298)||(45377183-45377297)
chr1 (255-371)||(24040984-24041100)
chr1 (229-298)||(672314-672383)
chr1 (135-298)||(44024505-44024666)
chr1 (144-340)||(48259854-48260039)
chr1 (173-371)||(6332160-6332359)
chr1 (135-298)||(12851701-12851860)
chr1 (173-371)||(50349817-50350016)
chr1 (135-340)||(2458968-2459167)
chr1 (135-298)||(28200255-28200417)
chr1 (261-374)||(37437360-37437474)
chr1 (184-370)||(40719020-40719206)
chr1 (173-293)||(50158345-50158465)
chr1 (255-422)||(1430445-1430613)
chr1 (179-298)||(42650282-42650402)
chr1 (144-298)||(11134493-11134646)
chr1 (230-294)||(5854261-5854327)
chr1 (173-374)||(40060863-40061055)
chr1 (135-290)||(15647104-15647253)
chr1 (135-221)||(84604-84686)
chr1 (257-378)||(43105555-43105676)
chr1 (255-355)||(84494-84594)
chr1 (600-651)||(28455952-28456003)
chr1 (600-651)||(32007152-32007203)
chr1 (600-651)||(41039302-41039353)
chr1 (600-651)||(41808280-41808331)
chr1 (600-651)||(45813010-45813061)
chr1 (601-651)||(5055788-5055838)
chr1 (601-651)||(48660100-48660150)
chr1 (139-221)||(9552440-9552518)
chr1 (258-340)||(49894861-49894943)
chr1 (144-221)||(24041111-24041184)
chr1 (254-355)||(30006205-30006306)
chr1 (173-221)||(38132278-38132326)
chr1 (600-651)||(192493-192544)
chr1 (600-651)||(29994382-29994433)
chr1 (600-651)||(41761410-41761461)
chr1 (255-298)||(43755104-43755147)
chr1 (601-651)||(20826-20876)
chr1 (601-651)||(13109848-13109898)
chr1 (602-651)||(35945875-35945924)
chr1 (173-221)||(26582919-26582967)
chr1 (604-651)||(7275759-7275806)
chr1 (600-647)||(11688345-11688392)
chr1 (255-295)||(38132226-38132268)
chr1 (600-651)||(39276428-39276479)
chr1 (276-364)||(45749466-45749554)
chr1 (140-200)||(34047365-34047422)
chr1 (601-651)||(49783785-49783835)
chr1 (255-298)||(50591351-50591396)
chr1 (261-294)||(9552392-9552425)
chr1 (602-651)||(21939020-21939069)
chr1 (602-651)||(26264537-26264586)
chr1 (602-651)||(32982351-32982400)
chr1 (173-221)||(1430623-1430671)
chr1 (173-221)||(35149491-35149539)
chr1 (140-192)||(48008972-48009023)
chr1 (135-200)||(48025384-48025445)
[»] chr8 (72 HSPs)
chr8 (173-404)||(11257536-11257764)
chr8 (135-417)||(7612458-7612735)
chr8 (135-291)||(9022355-9022507)
chr8 (177-408)||(27109743-27109975)
chr8 (140-340)||(14541737-14541934)
chr8 (177-374)||(22601134-22601330)
chr8 (173-371)||(5588428-5588632)
chr8 (180-298)||(8382511-8382629)
chr8 (134-360)||(30788894-30789116)
chr8 (179-298)||(3095537-3095656)
chr8 (179-298)||(34461615-34461737)
chr8 (184-298)||(32661310-32661424)
chr8 (137-290)||(42946082-42946233)
chr8 (184-371)||(32326685-32326873)
chr8 (173-371)||(36915361-36915557)
chr8 (184-298)||(34168245-34168353)
chr8 (153-298)||(39970300-39970444)
chr8 (173-298)||(27416495-27416622)
chr8 (135-293)||(35052431-35052587)
chr8 (180-298)||(18673131-18673251)
chr8 (255-371)||(6839283-6839399)
chr8 (601-651)||(13891168-13891218)
chr8 (257-371)||(2067778-2067892)
chr8 (229-298)||(5044260-5044329)
chr8 (257-371)||(38329015-38329128)
chr8 (244-297)||(43938186-43938239)
chr8 (258-298)||(26439045-26439085)
chr8 (144-293)||(29931279-29931414)
chr8 (600-651)||(1339-1390)
chr8 (600-651)||(1078647-1078698)
chr8 (600-651)||(6602517-6602568)
chr8 (600-651)||(6677970-6678021)
chr8 (600-651)||(28817334-28817385)
chr8 (600-651)||(32333192-32333243)
chr8 (600-651)||(35779496-35779547)
chr8 (600-651)||(42192638-42192689)
chr8 (600-651)||(42885252-42885303)
chr8 (601-651)||(70523-70573)
chr8 (255-342)||(18666534-18666621)
chr8 (601-651)||(31695269-31695319)
chr8 (602-651)||(9292096-9292145)
chr8 (257-298)||(11336066-11336107)
chr8 (257-298)||(16209019-16209060)
chr8 (602-651)||(20269608-20269657)
chr8 (602-651)||(21056237-21056286)
chr8 (140-221)||(1774170-1774247)
chr8 (255-364)||(7129353-7129462)
chr8 (229-298)||(13109037-13109108)
chr8 (600-651)||(4530981-4531032)
chr8 (600-651)||(7792739-7792790)
chr8 (604-651)||(7813400-7813447)
chr8 (140-217)||(11336122-11336196)
chr8 (257-373)||(41414911-41415026)
chr8 (264-298)||(8471344-8471378)
chr8 (173-297)||(32271503-32271628)
chr8 (248-298)||(37185684-37185734)
chr8 (257-298)||(41790174-41790215)
chr8 (254-298)||(2803279-2803323)
chr8 (259-298)||(156309-156348)
chr8 (604-651)||(31532128-31532175)
chr8 (609-651)||(5385416-5385458)
chr8 (600-642)||(10963241-10963283)
chr8 (601-647)||(31969720-31969766)
chr8 (322-408)||(32061382-32061468)
chr8 (601-651)||(42364702-42364752)
chr8 (254-298)||(8107202-8107246)
chr8 (140-200)||(14234350-14234405)
chr8 (135-200)||(17920916-17920977)
chr8 (601-645)||(29425435-29425479)
chr8 (173-221)||(32061534-32061582)
chr8 (233-297)||(32737820-32737883)
chr8 (177-221)||(38329140-38329184)
[»] chr7 (73 HSPs)
chr7 (177-383)||(41905883-41906088)
chr7 (177-408)||(1103483-1103710)
chr7 (187-383)||(34002080-34002277)
chr7 (173-417)||(3680838-3681081)
chr7 (135-371)||(17869198-17869430)
chr7 (135-298)||(40298808-40298967)
chr7 (173-298)||(19906409-19906534)
chr7 (173-364)||(42259516-42259706)
chr7 (173-293)||(19920310-19920430)
chr7 (173-298)||(31416783-31416910)
chr7 (173-371)||(28044101-28044290)
chr7 (229-417)||(34733362-34733547)
chr7 (173-298)||(5722998-5723122)
chr7 (144-340)||(32345825-32346020)
chr7 (173-294)||(42044015-42044138)
chr7 (173-374)||(32275199-32275391)
chr7 (255-409)||(42010497-42010651)
chr7 (173-340)||(26963474-26963643)
chr7 (173-298)||(30514968-30515095)
chr7 (173-294)||(36447106-36447229)
chr7 (255-369)||(18886722-18886836)
chr7 (140-298)||(30833127-30833280)
chr7 (173-298)||(18733448-18733575)
chr7 (184-340)||(39117479-39117636)
chr7 (232-298)||(33845443-33845509)
chr7 (184-371)||(22627314-22627494)
chr7 (173-371)||(26527358-26527555)
chr7 (135-371)||(42121511-42121735)
chr7 (135-274)||(19288405-19288540)
chr7 (254-371)||(33056244-33056362)
chr7 (244-298)||(48838718-48838772)
chr7 (136-371)||(36447571-36447794)
chr7 (177-298)||(36836058-36836180)
chr7 (229-340)||(10684820-10684933)
chr7 (600-651)||(4106816-4106867)
chr7 (600-651)||(19630667-19630718)
chr7 (600-651)||(23358263-23358314)
chr7 (600-651)||(25546274-25546325)
chr7 (600-651)||(38781207-38781258)
chr7 (600-651)||(47570717-47570768)
chr7 (601-651)||(4107387-4107437)
chr7 (601-651)||(31770532-31770582)
chr7 (271-342)||(40207379-40207450)
chr7 (163-298)||(6521803-6521939)
chr7 (177-246)||(43813430-43813499)
chr7 (600-651)||(2146714-2146765)
chr7 (600-651)||(5772818-5772869)
chr7 (135-200)||(19105131-19105193)
chr7 (600-651)||(25112246-25112297)
chr7 (600-651)||(40058316-40058367)
chr7 (604-651)||(44084018-44084065)
chr7 (600-647)||(47250250-47250297)
chr7 (244-340)||(47272217-47272313)
chr7 (600-651)||(48146831-48146882)
chr7 (601-651)||(8439156-8439206)
chr7 (601-651)||(11355901-11355951)
chr7 (601-651)||(31288224-31288274)
chr7 (601-651)||(47557859-47557909)
chr7 (601-642)||(4001844-4001885)
chr7 (177-221)||(18886668-18886712)
chr7 (266-298)||(19277078-19277110)
chr7 (266-298)||(29001597-29001629)
chr7 (604-651)||(15634882-15634929)
chr7 (600-651)||(27915579-27915630)
chr7 (141-192)||(29531073-29531124)
chr7 (600-651)||(38033807-38033858)
chr7 (600-651)||(41183893-41183944)
chr7 (140-200)||(45948760-45948817)
chr7 (601-642)||(7162790-7162831)
chr7 (177-221)||(22597229-22597273)
chr7 (135-200)||(32501879-32501940)
chr7 (177-221)||(32873274-32873318)
chr7 (611-651)||(34763520-34763560)
[»] scaffold0886 (1 HSPs)
scaffold0886 (173-408)||(4031-4267)
[»] scaffold0238 (1 HSPs)
scaffold0238 (229-408)||(15963-16141)
[»] scaffold0119 (3 HSPs)
scaffold0119 (184-371)||(1548-1735)
scaffold0119 (600-651)||(13950-14001)
scaffold0119 (600-651)||(19630-19681)
[»] scaffold0003 (1 HSPs)
scaffold0003 (135-298)||(321688-321847)
[»] scaffold0047 (1 HSPs)
scaffold0047 (135-298)||(70486-70647)
[»] scaffold0519 (1 HSPs)
scaffold0519 (173-298)||(7733-7856)
[»] scaffold0189 (1 HSPs)
scaffold0189 (173-298)||(13092-13217)
[»] scaffold0194 (1 HSPs)
scaffold0194 (164-293)||(8143-8274)
[»] scaffold0072 (1 HSPs)
scaffold0072 (184-371)||(12042-12219)
[»] scaffold0007 (1 HSPs)
scaffold0007 (233-298)||(158154-158219)
[»] scaffold0580 (2 HSPs)
scaffold0580 (306-371)||(1701-1766)
scaffold0580 (306-371)||(9440-9505)
[»] scaffold1348 (1 HSPs)
scaffold1348 (600-651)||(861-912)
[»] scaffold0032 (1 HSPs)
scaffold0032 (600-651)||(56559-56610)
[»] scaffold0044 (1 HSPs)
scaffold0044 (600-647)||(9972-10019)
[»] scaffold0352 (1 HSPs)
scaffold0352 (601-651)||(8943-8993)
[»] scaffold0038 (1 HSPs)
scaffold0038 (601-651)||(114330-114380)
[»] scaffold0053 (1 HSPs)
scaffold0053 (601-651)||(22241-22291)
[»] scaffold0060 (1 HSPs)
scaffold0060 (173-221)||(31619-31667)


Alignment Details
Target: chr4 (Bit Score: 549; Significance: 0; HSPs: 84)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 549; E-Value: 0
Query Start/End: Original strand, 6 - 651
Target Start/End: Original strand, 19848908 - 19849553
Alignment:
Q  6 catctagatgcaatcattccacaagaaaggttacaccaacaacagatgagaacatggagggcagtaaatcaaattcatggctctatttttgtgttccttc 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19848908 catctagatgcaatcattccacaagaaaggttacaccaacaacagatgagaacatggagggcagtaaatcaaattcatggctctatttttgtgttccttc 19849007  T
Q  106 tcttcctctctcgccataaataacatcttctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaat 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19849008 tcttcctctctcgccataaataacatcttctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaat 19849107  T
Q  206 tccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnn 305  Q
    ||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           
T  19849108 tccaatacaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgttttttt 19849207  T
Q  306 cttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaatatgcgtgtcaaactcttaaacgacacttattgtg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19849208 cttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaatatgcgtgtcaaactcttaaacgacacttattgtg 19849307  T
Q  406 aaatagagggagcataaaataatagaattggttatacagttggtgttatgatggtgataagaaaggcttttatgaaacatacttggattgttcttggatg 505  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19849308 aaatagagggagcataaaataatagaattggttatacagttggtgttatgatggtgataagaaaggcttttatgaaacatacttggattgttcttggatg 19849407  T
Q  506 atgttgcattttgtatttttatattcttccttggttgttgtggttgtaaggagtattcattcacgtccctgttagaannnnnnnnnnnnnnnnnggtctt 605  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                 ||||||    
T  19849408 atgttgcattttgtatttttatattcttccttggttgttgtggttgtaaggagtattcattcacgtccctgttagaatttttttttttttttttggtctt 19849507  T
Q  606 aggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    || |||||||||||||||||||||||||||||||||||||||||||    
T  19849508 agatgaagtggtaaaccattgaaaataaactcacacacaactgtga 19849553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 144 - 371
Target Start/End: Original strand, 44855208 - 44855433
Alignment:
Q  144 aaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaa--ctttac 241  Q
    |||||||| |||||||||||||||||    |||||||||  |||| ||| |||||||||| |||||||||||||||||       |||||||  ||||||    
T  44855208 aaaatgagtgtcattttagcaaaaaa----aaattgtttcgaaataaatgtcactttacatttccaatacaactttaagttttctcttccaattctttac 44855303  T
Q  242 cctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttata 341  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||       |||||||||| |||||||||||||||||  ||||||    
T  44855304 cctcaataaataatccaacttttctctcacacaattttcaatgcaactttaattttgtcttttccttataaagtaagggcagtttagtaaaagcgttata 44855403  T
Q  342 tgtaataattattttatttcatttcttaat 371  Q
    |  ||| ||||||| |||  ||||||||||    
T  44855404 ttcaatgattatttcattctatttcttaat 44855433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 140 - 371
Target Start/End: Original strand, 30022031 - 30022256
Alignment:
Q  140 ttttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaacttt 239  Q
    |||||||||||| ||||||||||     |||| ||| |||||| ||||||||| | |||| ||| |||||||||||||||||       |||||||||||    
T  30022031 ttttaaaatgagtgtcattttag-----aagaaaaatttgtttcaaaatgaatgttacttgacatttccaatacaactttaatttttttcttccaacttt 30022125  T
Q  240 accctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgtta 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||       |||||| |  || || |||||||||||| |||||    
T  30022126 accctcaataaatacttcaacttttctctcacacaattttcaatgcaactttgagtttgtctttttcttataca-agaaggtagtttagtaaaagtgtta 30022224  T
Q  340 tatgtaataattattttatttcatttcttaat 371  Q
    ||| |||| |||||||||||||||| ||||||    
T  30022225 tatataatgattattttatttcattccttaat 30022256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 173 - 340
Target Start/End: Original strand, 24259602 - 24259771
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttt--tctctca 270  Q
    |||||||||| ||||||||| |||||||||| ||||||| |||||||||       |||||||||||||||||||||||||||||||||||  |||||||    
T  24259602 aaaattgtttcaaaatgaatgtcactttacatttccaatgcaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctctca 24259701  T
Q  271 cacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttat 340  Q
    ||||||||||||||||||||||||||||       |||||||||| |||  | |||||||||| ||||||    
T  24259702 cacaattttcaatgcaactttaagtttgtcattttcttataaagtaaggttattttagtaaaattgttat 24259771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 173 - 374
Target Start/End: Original strand, 22212332 - 22212533
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||||||||||||||||||| |||| ||||| |||||||| ||||||||       |||||||||||||||||||||||||||||||| ||| |||||||    
T  22212332 aaaattgttttaaaatgaatgtcaccttacatttccaatataactttaatttttttcttccaactttaccctcaataaatactccaacatttttctcaca 22212431  T
Q  273 caattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaata 372  Q
    ||||||||||| ||||||||||||||         ||||||   | |||||||| |||||| |||||| | |||| ||||||| |||||||| |||||||    
T  22212432 caattttcaatacaactttaagtttgagttttttatataaaacaaaggcagttttgtaaaagtgttatgtctaatgattatttcatttcattccttaata 22212531  T
Q  373 tg 374  Q
    ||    
T  22212532 tg 22212533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 171 - 298
Target Start/End: Original strand, 31987293 - 31987420
Alignment:
Q  171 ataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctca 270  Q
    |||||||| ||||||||||||| |||||||||| ||| |||||||||||||       |||||||||||||||||||||||||||||||||||||||||     
T  31987293 ataaaattattttaaaatgaatgtcactttacatttctaatacaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctcg 31987392  T
Q  271 cacaattttcaatgcaactttaagtttg 298  Q
    || |||||||||||||||||||| ||||    
T  31987393 cataattttcaatgcaactttaaatttg 31987420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 173 - 364
Target Start/End: Original strand, 37445651 - 37445842
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||||||||||||||||||| ||| |||||| ||  |||||||||||||       ||||||||||||||||||||||||| || || |||||| |||||    
T  37445651 aaaattgttttaaaatgaatgtcattttacatttttaatacaactttaatttttttcttccaactttaccctcaataaatattcaaatttttctttcaca 37445750  T
Q  273 caattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatt 364  Q
     |||||| ||||||||||||| ||||       |||||||||| ||||||||||||||||| |||||| | |||| ||||||| ||||||||    
T  37445751 taatttttaatgcaactttaaatttgtctttttcttataaagtaagggcagtttagtaaaagtgttatgtctaatgattatttcatttcatt 37445842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 180 - 408
Target Start/End: Complemental strand, 45520611 - 45520384
Alignment:
Q  180 ttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaatttt 279  Q
    ||||||||||||| |||||||||| || ||||||||||||||       |||||||||||| |||  |||||||||| ||||||||||||| ||||||||    
T  45520611 ttttaaaatgaatgtcactttacattttcaatacaactttaatttttt-cttccaactttatccttgataaatactcaaacttttctctcatacaatttt 45520513  T
Q  280 caatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaatatgcgtgt 379  Q
     ||||||||||||||||||       ||||||| || ||||||| ||||||||| |||||| | |||| ||||||||||| ||||||||||| |  | ||    
T  45520512 taatgcaactttaagtttgtcttattcttataatgtaagggcagcttagtaaaagtgttatgtctaatgattattttattccatttcttaatctatgcgt 45520413  T
Q  380 caaactcttaaacgacacttattgtgaaa 408  Q
    ||||   |||||||| ||| |||||||||    
T  45520412 caaaactttaaacgatactcattgtgaaa 45520384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 158 - 298
Target Start/End: Original strand, 31941537 - 31941676
Alignment:
Q  158 tttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactcc 257  Q
    ||||||||||||   |||||||||||||||||||| |||||||||| || ||||||||||||||       |||||||||||||||||||||||||||||    
T  31941537 tttagcaaaaaa---aaaattgttttaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatactcc 31941633  T
Q  258 aac--ttttctctcacacaattttcaatgcaactttaagtttg 298  Q
    |||  || ||||||||| |||||||||||||||||||||||||    
T  31941634 aactattctctctcacataattttcaatgcaactttaagtttg 31941676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 34360077 - 34360194
Alignment:
Q  254 ctccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattat 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||||||| |||||||| |||| |||||    
T  34360077 ctccaacttttctctcacacaattttcaatgcaactttaagtttgtctttttcttataaagtaagggcagtttagtaaaagtgttatatctaatgattat 34360176  T
Q  354 tttatttcatttcttaat 371  Q
    || |||||||| ||||||    
T  34360177 ttcatttcattccttaat 34360194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 135 - 298
Target Start/End: Complemental strand, 17499913 - 17499751
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttcca 234  Q
    |||| |||||||||||| |||  ||||||||||||   |||||||||| ||||||||| || ||||||| ||||||| ||| |||||       ||||||    
T  17499913 ctccgttttaaaatgagtgtcgatttagcaaaaaa---aaaattgtttcaaaatgaatgtcgctttacatttccaatgcaattttaatttttttcttcca 17499817  T
Q  235 actttaccctcaataaatactccaacttttc--tctcacacaattttcaatgcaactttaagtttg 298  Q
    |||||||||||||||||||||| ||||||||  ||||| |||||||||||||||||||||||||||    
T  17499816 actttaccctcaataaatactcaaacttttctctctcatacaattttcaatgcaactttaagtttg 17499751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 233 - 371
Target Start/End: Original strand, 34096067 - 34096205
Alignment:
Q  233 caactttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaa 332  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||       |||||||||| |||||| |||||||||    
T  34096067 caactttaccctcaataaatattcaaacttttctctcacacaattttcaatgaaactttaagtttgtctttttcttataaagtaagggcaatttagtaaa 34096166  T
Q  333 aatgttatatgtaataattattttatttcatttcttaat 371  Q
    | |||||  | |||| ||||||| ||||||||| |||||    
T  34096167 agtgttaagtctaatgattatttcatttcattttttaat 34096205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 135 - 340
Target Start/End: Original strand, 34124252 - 34124455
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttcca 234  Q
    ||||||||||||||||| ||| ||||||  ||||| ||    |||||||||||||||| || ||||||| || |||| |||||||||       ||||||    
T  34124252 ctccattttaaaatgagtgtcgttttagtcaaaaaaat----ttgttttaaaatgaatgtcgctttacattttcaatgcaactttaatttttttcttcca 34124347  T
Q  235 actttaccctcaataaatactccaacttt--tctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaa 332  Q
    |||||||||||||||||||||| ||||||  |||||||||||||||||||| ||||||||||||||       |||||||||| |||  | |||||||||    
T  34124348 actttaccctcaataaatactcaaacttttctctctcacacaattttcaatacaactttaagtttgtatttttcttataaagtaaggttattttagtaaa 34124447  T
Q  333 aatgttat 340  Q
    | ||||||    
T  34124448 attgttat 34124455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 173 - 371
Target Start/End: Original strand, 52732590 - 52732780
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnn-cttccaactttaccctcaataaatactccaacttttctctcac 271  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||        |||||||||||||||||          ||||||||||||||||    
T  52732590 aaaattgttttaaaatgaatgtcactttacatttccaatacaactttaattttttttcttccaactttaccctcc---------ccaacttttctctcac 52732680  T
Q  272 acaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaat 371  Q
    |||||||||||||||||||||| ||||       |||||||||| ||||||||||||||||| ||||||||  ||| ||||||| ||| ||||| |||||    
T  52732681 acaattttcaatgcaactttaattttgtcttttccttataaagtaagggcagtttagtaaaagtgttatatccaatgattatttcattccattttttaat 52732780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 254 - 383
Target Start/End: Original strand, 54512095 - 54512224
Alignment:
Q  254 ctccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattat 353  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||       |||||||||| || ||||||||||||||| |||||||  ||| |||||    
T  54512095 ctccaacttttctctcacacaatgttcaatgcaactttaattttgtcattttcttataaagtaagagcagtttagtaaaaacgttatatccaattattat 54512194  T
Q  354 tttatttcatttcttaatatgcgtgtcaaa 383  Q
    || |||||||||||||||||| ||||||||    
T  54512195 ttcatttcatttcttaatatgtgtgtcaaa 54512224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 158 - 355
Target Start/End: Complemental strand, 15501318 - 15501133
Alignment:
Q  158 tttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactcc 257  Q
    ||||||||||||   |||||||||| ||||||||| |||||||||| |||||||||||||||||       |||||||| |||| |||         | |    
T  15501318 tttagcaaaaaa---aaaattgtttgaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaacattactctc---------ttc 15501231  T
Q  258 aacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattt 355  Q
    |||||||||||||||||||||| ||||||||||||||||||       |||||||||| |||||||||||||||||||||||| | |||| |||||||    
T  15501230 aacttttctctcacacaatttttaatgcaactttaagtttgtatttttcttataaagtaagggcagtttagtaaaaatgttatgtctaatgattattt 15501133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 173 - 298
Target Start/End: Original strand, 45889555 - 45889681
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttt--tctctca 270  Q
    |||||||||| ||||||||| || ||| ||| || ||||||||||||||       ||||| |||||||||||||||||||||||||||||  |||||||    
T  45889555 aaaattgtttcaaaatgaatgtcgctt-acattttcaatacaactttaacttttttcttcctactttaccctcaataaatactccaacttttctctctca 45889653  T
Q  271 cacaattttcaatgcaactttaagtttg 298  Q
    ||||||||||||||||||||||||||||    
T  45889654 cacaattttcaatgcaactttaagtttg 45889681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 255 - 417
Target Start/End: Complemental strand, 31817279 - 31817116
Alignment:
Q  255 tccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnn-cttataaagtgagggcagtttagtaaaaatgttatatgtaataattat 353  Q
    ||||||||||||||||||||||||||||||||||||||| ||||        |||||||||| |||| ||||||||||||| |||||||  ||| |||||    
T  31817279 tccaacttttctctcacacaattttcaatgcaactttaattttgtattttttcttataaagtaagggaagtttagtaaaaacgttatatccaatgattat 31817180  T
Q  354 tttatttcatttcttaatatgcgtgtcaaactcttaaacgacacttattgtgaaatagagggag 417  Q
    || ||| ||||||||||| || ||||||||  || || ||||||| ||| ||||| ||||||||    
T  31817179 ttcattccatttcttaatttgtgtgtcaaagcctaaagcgacactaattttgaaacagagggag 31817116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 163 - 294
Target Start/End: Original strand, 47321125 - 47321259
Alignment:
Q  163 caaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnn-cttccaactttaccctcaataaatactccaact 261  Q
    ||||||| | ||| |||||||||||||||| |||||||||| || ||||||||||||||        |||||||||||||||||||||||||||| ||||    
T  47321125 caaaaaaaaaaaatttgttttaaaatgaatgtcactttacattttcaatacaactttaattttttttcttccaactttaccctcaataaatactctaact 47321224  T
Q  262 tttct--ctcacacaattttcaatgcaactttaag 294  Q
    |||||  ||| ||||||||||||||||||||||||    
T  47321225 tttctcactcgcacaattttcaatgcaactttaag 47321259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 173 - 298
Target Start/End: Original strand, 28116236 - 28116363
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctct--ca 270  Q
    |||||| ||| ||||| ||| |||||||||| |||||||||||||||||       |||||||||||||||| ||||||||||| |||||||||||  ||    
T  28116236 aaaattatttcaaaataaatgtcactttacatttccaatacaactttaatttttttcttccaactttacccttaataaatactcaaacttttctctcaca 28116335  T
Q  271 cacaattttcaatgcaactttaagtttg 298  Q
    ||||||||||| || |||||||||||||    
T  28116336 cacaattttcagtgtaactttaagtttg 28116363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 134 - 296
Target Start/End: Complemental strand, 51434453 - 51434293
Alignment:
Q  134 tctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttcc 233  Q
    ||||| |||||||||||| |||  |||| |||||||    ||||||||||||||||||| || ||||||| ||| ||| |||||||||       ||||     
T  51434453 tctccgttttaaaatgagtgtcgctttaacaaaaaa----aaattgttttaaaatgaatgtcgctttacatttctaatgcaactttaattttttccttca 51434358  T
Q  234 aactttaccctcaataaatactccaacttttc--tctcacacaattttcaatgcaactttaagtt 296  Q
    ||||||||||||||||||||||  ||||||||  ||||||||||||||||||||||||| |||||    
T  51434357 aactttaccctcaataaatactttaacttttctctctcacacaattttcaatgcaacttaaagtt 51434293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 173 - 298
Target Start/End: Complemental strand, 29290051 - 29289927
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||||| ||||||||| ||| |||||||| | || ||||||||||| ||       |||| ||||||||| |||||||||||| ||||||||||||||||    
T  29290051 aaaattattttaaaattaatgtcactttatattttcaatacaacttcaatttttttcttcaaactttacc-tcaataaatacttcaacttttctctcaca 29289953  T
Q  273 caattttcaatgcaactttaagtttg 298  Q
    ||||||||||||||| ||||||||||    
T  29289952 caattttcaatgcaattttaagtttg 29289927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 186 - 298
Target Start/End: Original strand, 30492732 - 30492845
Alignment:
Q  186 aatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaa-ttttcaatg 284  Q
    ||||||| |||||||||| || ||||||||||||||       || |||||||||||||||||||||||||||||||||||||  ||||| |||| ||||    
T  30492732 aatgaatgtcactttacattttcaatacaactttaatttttttctcccaactttaccctcaataaatactccaacttttctcttgcacaattttttaatg 30492831  T
Q  285 caactttaagtttg 298  Q
    ||||||||||||||    
T  30492832 caactttaagtttg 30492845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 173 - 297
Target Start/End: Original strand, 35928482 - 35928604
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||||||||| ||||| ||| |||||||||| || ||||||||||||||       ||||||||||||||||||||||||||| |||| ||||| |  ||    
T  35928482 aaaattgtttcaaaataaatatcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatactgcaacgtttcttt--ca 35928579  T
Q  273 caattttcaatgcaactttaagttt 297  Q
    ||||||||||||||| |||||||||    
T  35928580 caattttcaatgcaattttaagttt 35928604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 233 - 417
Target Start/End: Complemental strand, 38761925 - 38761743
Alignment:
Q  233 caactttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaa 332  Q
    |||||||| |||||||||||||||||||||||||||  |||||||||||| | |||||||||| ||       || ||||||| ||||   |||||||||    
T  38761925 caactttaacctcaataaatactccaacttttctct--cacaattttcaaggtaactttaagtgtgtctttctctaataaagtaagggtgatttagtaaa 38761828  T
Q  333 aatgttatatgtaataattattttatttcatttcttaatatgcgtgtcaaactcttaaacgacacttattgtgaaatagagggag 417  Q
    | |||||| | || ||||||||| |||  ||||||||||    |||||||| |||||||| ||| ||||||||||| ||||||||    
T  38761827 agtgttatgtctattaattatttaattctatttcttaatccatgtgtcaaaatcttaaacaacagttattgtgaaacagagggag 38761743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 173 - 298
Target Start/End: Original strand, 54091949 - 54092074
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||||||||||||||||||| ||| |||| | ||  |||||||||||||       ||  ||||||||||||||||||||||||||||||||||||| ||    
T  54091949 aaaattgttttaaaatgaatgtcaatttagatttttaatacaactttaatttttttctctcaactttaccctcaataaatactccaacttttctctcgca 54092048  T
Q  273 caattttcaatgcaactttaagtttg 298  Q
     |||||||||| ||| ||||||||||    
T  54092049 taattttcaatacaattttaagtttg 54092074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 255 - 371
Target Start/End: Original strand, 51930649 - 51930765
Alignment:
Q  255 tccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattatt 354  Q
    ||||||||||||||||||||||||||||||||||||||| ||||       |||||||||| |||||||||||||||||  |||||||  ||| ||||||    
T  51930649 tccaacttttctctcacacaattttcaatgcaactttaattttgtcattttcttataaagtaagggcagtttagtaaaagcgttatatccaattattatt 51930748  T
Q  355 ttatttcatttcttaat 371  Q
    | ||| |||||| ||||    
T  51930749 tcattccatttcataat 51930765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 140 - 298
Target Start/End: Complemental strand, 19282602 - 19282443
Alignment:
Q  140 ttttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaa-nnnnnnncttccaactt 238  Q
    |||||||||||| |||  |||| ||||||| |  ||||||||| ||||||||| |||||||||| |||||||||||||||||        ||||||||||    
T  19282602 ttttaaaatgagtgtcgctttaacaaaaaaaa--aaattgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttcttccaactt 19282505  T
Q  239 taccctcaataaatactccaacttt--tctctcacacaattttcaatgcaactttaagtttg 298  Q
    |||| ||||||||||||| ||||||  |||||||||||||||  ||| ||| ||||||||||    
T  19282504 taccttcaataaatactctaacttttctctctcacacaatttctaatacaattttaagtttg 19282443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 173 - 275
Target Start/End: Original strand, 29840066 - 29840169
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnn-cttccaactttaccctcaataaatactccaacttttctctcac 271  Q
    |||||||||| ||||||||| |||||||||| |||||||||||||||||        || |||||||||||||||||||||||||||||||||||||| |    
T  29840066 aaaattgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttctcccaactttaccctcaataaatactccaacttttctctcgc 29840165  T
Q  272 acaa 275  Q
    ||||    
T  29840166 acaa 29840169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 173 - 298
Target Start/End: Original strand, 6462000 - 6462132
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttac---cctcaataaatactccaacttttctc-- 267  Q
    |||||||||| ||||||||| || ||||||| |||||||||||||||||       |||||||||||||   ||||||||||||||| ||||||| ||      
T  6462000 aaaattgtttcaaaatgaatgtcgctttacatttccaatacaactttaatttttttcttccaactttaccctcctcaataaatactcaaacttttatcta 6462099  T
Q  268 --tcacacaattttcaatgcaactttaagtttg 298  Q
      ||||||||| |||||||||||||||||||||    
T  6462100 tttcacacaatattcaatgcaactttaagtttg 6462132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 255 - 369
Target Start/End: Original strand, 50072330 - 50072438
Alignment:
Q  255 tccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattatt 354  Q
    |||||||||| |||||||||||||||||||||||||||| ||||       |||||||||| |||||||||||||||||| |||||||  ||| ||||||    
T  50072330 tccaacttttttctcacacaattttcaatgcaactttaattttg------tcttataaagtaagggcagtttagtaaaaacgttatatccaatgattatt 50072423  T
Q  355 ttatttcatttctta 369  Q
    | ||| |||||||||    
T  50072424 tcattccatttctta 50072438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 176 - 371
Target Start/End: Complemental strand, 36805601 - 36805413
Alignment:
Q  176 attgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaa 275  Q
    |||||||||||||| || | | |||||| || ||||||||||||||       |||||||||||| |||||       ||||||||||| ||||||||||    
T  36805601 attgttttaaaatgtatgttattttacatttgcaatacaactttaatttttttcttccaactttaacctca-------ctccaacttttttctcacacaa 36805509  T
Q  276 ttttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaat 371  Q
    |||||||| ||||||||||||||       | |||||| | ||| ||||||||||||| |||||| | |||| ||||||| |||||||| ||||||    
T  36805508 ttttcaatacaactttaagtttgtctttttcatataaactaaggacagtttagtaaaagtgttatgtctaatgattatttcatttcattccttaat 36805413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 232 - 355
Target Start/End: Original strand, 42672439 - 42672562
Alignment:
Q  232 ccaactttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaa 331  Q
    |||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||||| ||||       ||||||||||  | | ||||||||||    
T  42672439 ccaactttaccctcaataaatacttcaacttctctcttacacaattttcaatacaactttaaatttgtctttttcttataaagtatgagtagtttagtaa 42672538  T
Q  332 aaatgttatatgtaataattattt 355  Q
    || |||||| | |||| |||||||    
T  42672539 aagtgttatgtctaatgattattt 42672562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 177 - 408
Target Start/End: Original strand, 6510113 - 6510343
Alignment:
Q  177 ttgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaat 276  Q
    |||||| ||||| ||| |||||||| | || ||||||||||||||       ||  |||||||||||||||||||||||||| ||||||||| |||||||    
T  6510113 ttgtttcaaaataaatgtcactttatattttcaatacaactttaacttttttctctcaactttaccctcaataaatactccaccttttctcttacacaat 6510212  T
Q  277 tttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaatatgcg 376  Q
    ||| |||| || ||||||||||        ||||||||| |   ||||||| |||||||||||| | |||| | | ||  ||| ||||| ||||| |  |    
T  6510213 ttttaatgtaattttaagtttgtctttttattataaagt-aaaacagtttaataaaaatgttatgtctaatgactgttccattacattttttaatctatg 6510311  T
Q  377 tgtcaaactcttaaacgacacttattgtgaaa 408  Q
    ||||||| |||||||||||| | |||||||||    
T  6510312 tgtcaaaatcttaaacgacattcattgtgaaa 6510343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 257 - 371
Target Start/End: Complemental strand, 39671183 - 39671069
Alignment:
Q  257 caacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattatttt 356  Q
    ||||||||||||||||||||||||||||||||||||||||||       |||||||||| | || |||||||||||  |||||| | |||| || ||||     
T  39671183 caacttttctctcacacaattttcaatgcaactttaagtttgtttttttcttataaagtaaaggtagtttagtaaatgtgttatgtctaatgataatttc 39671084  T
Q  357 atttcatttcttaat 371  Q
    ||| |||||||||||    
T  39671083 attccatttcttaat 39671069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 184 - 420
Target Start/End: Original strand, 11835109 - 11835342
Alignment:
Q  184 aaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaattttcaat 283  Q
    ||||||||| |||||||||| ||  |||| ||||||||       ||| ||| |||||| ||||||||||||| | |||  |||||||||||||||||||    
T  11835109 aaaatgaatgtcactttacatttttaatataactttaatttttttctttcaaatttaccttcaataaatactcaacctt--ctctcacacaattttcaat 11835206  T
Q  284 gcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaatatgcgtgtcaaa 383  Q
    ||||||||||||||        |||||||| |   || |||||| ||||| ||||||   |||||||||||| ||||||||||||||| |   |||||||    
T  11835207 gcaactttaagttt-atcttttcttataaactataggtagtttaataaaagtgttatgcctaataattatttcatttcatttcttaatctatatgtcaaa 11835305  T
Q  384 ctcttaaacgacacttattgtgaaatagagggagcat 420  Q
       |||||||||||| ||||| ||| ||| |||||||    
T  11835306 actttaaacgacactcattgtaaaacagaaggagcat 11835342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 153 - 287
Target Start/End: Complemental strand, 17318022 - 17317889
Alignment:
Q  153 gtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnn-cttccaactttaccctcaataaa 251  Q
    |||| |||||||||||| | |||  ||||| ||| ||||| |||| ||||| |||||||||||||||||        ||| |||||||||| ||||||||    
T  17318022 gtcactttagcaaaaaaaaaaaa--tgtttcaaactgaatgtcacattacatttccaatacaactttaattttttttctttcaactttaccttcaataaa 17317925  T
Q  252 tactccaacttttctctcacacaattttcaatgcaa 287  Q
    ||||| ||||||| ||||||||||||||||||||||    
T  17317924 tactcaaacttttatctcacacaattttcaatgcaa 17317889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 255 - 371
Target Start/End: Original strand, 21045206 - 21045322
Alignment:
Q  255 tccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattatt 354  Q
    ||||||||||||||||||||||||||||||||||||||| ||||       |||||||||| ||||||||||| |||||   ||||||  ||| ||||||    
T  21045206 tccaacttttctctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttaataaaagccttatatccaatgattatt 21045305  T
Q  355 ttatttcatttcttaat 371  Q
    | ||| |||| ||||||    
T  21045306 tcattccattccttaat 21045322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 255 - 371
Target Start/End: Complemental strand, 32141065 - 32140949
Alignment:
Q  255 tccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattatt 354  Q
    ||||||||||||||||||||||||||||||||| |||| |||||        |||||||||  |||||||||||||||| |||||| | |||| ||||||    
T  32141065 tccaacttttctctcacacaattttcaatgcaaatttatgtttgtcttttgtttataaagtaggggcagtttagtaaaagtgttatgtctaatgattatt 32140966  T
Q  355 ttatttcatttcttaat 371  Q
    | |||  ||||||||||    
T  32140965 tcattcaatttcttaat 32140949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 56556444 - 56556366
Alignment:
Q  140 ttttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaa 221  Q
    |||||||||||| |||| ||||||||||||   |||||||||| ||||||||| |||||||||| |||||||||||||||||    
T  56556444 ttttaaaatgagtgtcactttagcaaaaaa---aaaattgtttcaaaatgaatgtcactttacatttccaatacaactttaa 56556366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 135 - 293
Target Start/End: Complemental strand, 45903604 - 45903446
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttcca 234  Q
    |||| ||| |||||||| |||||||||    |||| | |||||| ||| ||||||||| |||||||||| || ||||||||||||||       || |||    
T  45903604 ctccgtttgaaaatgagtgtcattttaaggtaaaaaaaaaaattatttcaaaatgaatgtcactttacattttcaatacaactttaatttttttctacca 45903505  T
Q  235 actttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaa 293  Q
    |||| | |||||| || |||||  ||||||||||||  |||||||||||||||||||||    
T  45903504 acttaaacctcaaaaagtactctgacttttctctcatccaattttcaatgcaactttaa 45903446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 177 - 371
Target Start/End: Complemental strand, 43421272 - 43421087
Alignment:
Q  177 ttgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaat 276  Q
    |||||| ||||||||  |||||||||| |||| ||||||||||||       |||||||||||||||||         ||||  ||||||||||||||||    
T  43421272 ttgtttcaaaatgaaggtcactttacatttcccatacaactttaatttttttcttccaactttaccctc---------tccaggttttctctcacacaat 43421182  T
Q  277 tttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaat 371  Q
     |||||||||||||||| ||||       |||||||||| || ||| |||||||||| | ||||||  ||| ||||||| ||| |||||||||||    
T  43421181 attcaatgcaactttaattttgtctttttcttataaagtaagagcaatttagtaaaagtattatatccaatgattatttcattccatttcttaat 43421087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 234 - 298
Target Start/End: Original strand, 45049761 - 45049825
Alignment:
Q  234 aactttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttg 298  Q
    |||||||| |||||||| |||||| |||||||| || ||||||||||||||||||||||||||||    
T  45049761 aactttactctcaataagtactcctacttttctttcgcacaattttcaatgcaactttaagtttg 45049825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 298
Target Start/End: Original strand, 55126494 - 55126615
Alignment:
Q  179 gttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctc--acacaat 276  Q
    |||||||||||||| ||| |||| | || ||||||||||||||       |||| |||| |||||| || |||||||| ||||||||||||  |||||||    
T  55126494 gttttaaaatgaatgtcattttaaattttcaatacaactttaatttttctcttctaactctaccctaaaaaaatactctaacttttctctcctacacaat 55126593  T
Q  277 tttcaatgcaactttaagtttg 298  Q
    ||||  ||||||||||||||||    
T  55126594 tttccttgcaactttaagtttg 55126615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 229 - 298
Target Start/End: Complemental strand, 4408282 - 4408211
Alignment:
Q  229 cttccaactttaccctcaataaatactccaacttttctctc--acacaattttcaatgcaactttaagtttg 298  Q
    ||||| |||||| ||||||||||| ||| ||||||||||||  |||||||||||||||||| ||||||||||    
T  4408282 cttccgactttaacctcaataaatgctcaaacttttctctctcacacaattttcaatgcaattttaagtttg 4408211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Complemental strand, 12735560 - 12735509
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  12735560 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 12735509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 26424857 - 26424908
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  26424857 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 26424908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Complemental strand, 34739409 - 34739358
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  34739409 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 34739358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Complemental strand, 45874184 - 45874133
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  45874184 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 45874133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 601 - 651
Target Start/End: Complemental strand, 1174079 - 1174029
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  1174079 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 1174029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 601 - 651
Target Start/End: Original strand, 43139906 - 43139956
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  43139906 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 43139956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 601 - 651
Target Start/End: Complemental strand, 53457952 - 53457902
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  53457952 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 53457902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 3093411 - 3093460
Alignment:
Q  244 tcaataaatactccaacttttctctcacacaattttcaatgcaactttaa 293  Q
    |||||||||||| |||||||||||||||||||||| | ||||||||||||    
T  3093411 tcaataaatacttcaacttttctctcacacaatttccgatgcaactttaa 3093460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 600 - 649
Target Start/End: Original strand, 23417482 - 23417531
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgt 649  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||    
T  23417482 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgt 23417531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 601 - 649
Target Start/End: Original strand, 28798388 - 28798436
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgt 649  Q
    ||||||| ||||||||||| ||| |||||||||||||||||||||||||    
T  28798388 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgt 28798436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 221
Target Start/End: Complemental strand, 32141158 - 32141075
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaa 221  Q
    |||| ||| |||||||| ||| ||||| |||||||   |||||||||| |||||||||  ||||||||| |||||||||||||||||    
T  32141158 ctccgtttcaaaatgagtgtcgttttaacaaaaaa---aaaattgtttcaaaatgaatgccactttacatttccaatacaactttaa 32141075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 279
Target Start/End: Original strand, 44835328 - 44835432
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttcc-aactttaccctcaataaatactccaacttttctctcac 271  Q
    |||||||||||||   |||| |||||||||| ||| |||||||||||||       ||||| ||||||||||||||||| || ||||||| |||||||||    
T  44835328 aaaattgttttaa---gaatatcactttacatttcgaatacaactttaatttttttcttccaaactttaccctcaataactagtccaactcttctctcac 44835424  T
Q  272 acaatttt 279  Q
    | ||||||    
T  44835425 ataatttt 44835432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 238457 - 238508
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||| | ||||||||||| ||| |||||||||||||||||||||||||||    
T  238457 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtga 238508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 600 - 651
Target Start/End: Complemental strand, 12867970 - 12867919
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| ||||||||||||||| |||||||||||    
T  12867970 ggtcttagatgaagtggtaatccactgaaaataaactcactcacaactgtga 12867919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 651
Target Start/End: Complemental strand, 18257457 - 18257407
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| ||||||||||| ||| ||||||||||||||| |||||||||||    
T  18257457 gtcttagatgaagtggtaatccactgaaaataaactcacgcacaactgtga 18257407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 651
Target Start/End: Complemental strand, 31015110 - 31015060
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| |||||||||||| || ||||| |||||||||||||||||||||    
T  31015110 gtcttagatgaagtggtaaagcactgaaattaaactcacacacaactgtga 31015060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 298
Target Start/End: Original strand, 38692464 - 38692506
Alignment:
Q  256 ccaacttttctctcacacaattttcaatgcaactttaagtttg 298  Q
    |||||||||||||| ||||||||||||||||||||||| ||||    
T  38692464 ccaacttttctctcgcacaattttcaatgcaactttaattttg 38692506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 221
Target Start/End: Original strand, 50072237 - 50072320
Alignment:
Q  134 tctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaa 221  Q
    ||||| ||| |||||||| |||| |||||| |||||    ||||||||| ||||||||| |||||||||| || ||||||||||||||    
T  50072237 tctccgtttcaaaatgagtgtcactttagccaaaaa----aaattgtttcaaaatgaatgtcactttacattttcaatacaactttaa 50072320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 298
Target Start/End: Original strand, 54233900 - 54233934
Alignment:
Q  264 tctctcacacaattttcaatgcaactttaagtttg 298  Q
    |||||||||||||||||||||||||||||||||||    
T  54233900 tctctcacacaattttcaatgcaactttaagtttg 54233934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 40837086 - 40837151
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcacttt 200  Q
    |||||||||||||| || ||| ||||||||| ||| | |||||||||| ||||||||| |||||||    
T  40837086 ctccattttaaaataagtgtcgttttagcaacaaaaaaaaaattgtttcaaaatgaatgtcacttt 40837151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 611 - 651
Target Start/End: Complemental strand, 37134166 - 37134126
Alignment:
Q  611 aagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||||||||| ||||| |||||||||||||||||||||    
T  37134166 aagtggtaaaccactgaaattaaactcacacacaactgtga 37134126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 221
Target Start/End: Complemental strand, 39671277 - 39671194
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaa 221  Q
    |||||||| |||||||| |||| |||| | |||||   |||||||||| ||||||||| ||  |||||| |||||||||||||||||    
T  39671277 ctccatttcaaaatgagtgtcactttatccaaaaa---aaaattgtttcaaaatgaatgtcgttttacatttccaatacaactttaa 39671194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 52768300 - 52768350
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| |||| |||||| ||||||||| |||||||||||||||||||||    
T  52768300 ggtcttagatgaa-tggtaatccattgaaattaaactcacacacaactgtga 52768350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 52848246 - 52848190
Alignment:
Q  140 ttttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcacttt 200  Q
    |||||||||||| ||| |||||||||||||    ||||||||||||||||||| |||||||    
T  52848246 ttttaaaatgagtgtcgttttagcaaaaaa----aaattgttttaaaatgaatgtcacttt 52848190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 54768431 - 54768482
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||| |||||| |||||||||||||    
T  54768431 ggtcttagatgaagtggtaatccactgaaaaaaaactcgcacacaactgtga 54768482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 298
Target Start/End: Complemental strand, 56556355 - 56556312
Alignment:
Q  255 tccaacttttctctcacacaattttcaatgcaactttaagtttg 298  Q
    |||||||||||||||||||||||||||||| ||  |||||||||    
T  56556355 tccaacttttctctcacacaattttcaatgtaatgttaagtttg 56556312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 651
Target Start/End: Complemental strand, 1966678 - 1966628
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| |||||| |||| ||| ||||| |||||||||||||||||||||    
T  1966678 gtcttagatgaagttgtaatccactgaaattaaactcacacacaactgtga 1966628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 651
Target Start/End: Complemental strand, 19225387 - 19225337
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| ||||||||||||||| ||||| ||||||||| ||||| |||||    
T  19225387 gtcttagatgaagtggtaaaccactgaaactaaactcacgcacaattgtga 19225337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 647
Target Start/End: Complemental strand, 33770696 - 33770650
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaact 647  Q
    ||||||| ||||| ||||||||| ||||| |||||||||||||||||    
T  33770696 gtcttagatgaagcggtaaaccactgaaattaaactcacacacaact 33770650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 609 - 651
Target Start/End: Complemental strand, 48822933 - 48822891
Alignment:
Q  609 tgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||||||| | ||||||| |||||||||||||||||||||    
T  48822933 tgaagtggtaatctattgaaattaaactcacacacaactgtga 48822891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 647
Target Start/End: Complemental strand, 55400356 - 55400310
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaact 647  Q
    ||||||| ||||||||||| ||| |||||||||||||||| ||||||    
T  55400356 gtcttagatgaagtggtaatccactgaaaataaactcacatacaact 55400310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 651
Target Start/End: Complemental strand, 12767214 - 12767165
Alignment:
Q  602 tcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||| |||||  |||||||| ||||| |||||||||||||||||||||    
T  12767214 tcttagatgaagcagtaaaccagtgaaattaaactcacacacaactgtga 12767165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 610 - 651
Target Start/End: Complemental strand, 39807963 - 39807922
Alignment:
Q  610 gaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||||| ||| ||||| |||||||||||||||||||||    
T  39807963 gaagtggtaatccactgaaattaaactcacacacaactgtga 39807922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 49089421 - 49089485
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcacttt 200  Q
    |||| ||| |||||||| ||| ||||||||||||| | |||||||||| ||||||||| |||||||    
T  49089421 ctccgtttcaaaatgagtgtcgttttagcaaaaaa-aaaaaattgtttcaaaatgaatgtcacttt 49089485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 651
Target Start/End: Complemental strand, 55214779 - 55214730
Alignment:
Q  602 tcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||| | ||||||||| ||| |||||||||||||| ||||||||||||    
T  55214779 tcttagataaagtggtaatccactgaaaataaactcatacacaactgtga 55214730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 600 - 640
Target Start/End: Complemental strand, 11278107 - 11278067
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcaca 640  Q
    |||||||| ||||||||||||||| ||||| ||||||||||    
T  11278107 ggtcttagatgaagtggtaaaccactgaaattaaactcaca 11278067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 21045151 - 21045195
Alignment:
Q  177 ttgttttaaaatgaatttcactttacaattccaatacaactttaa 221  Q
    |||||| ||||||||| |||||||||| || ||||||||||||||    
T  21045151 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaa 21045195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 615 - 651
Target Start/End: Original strand, 44369929 - 44369965
Alignment:
Q  615 ggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  44369929 ggtaaaccactgaaattaaactcacacacaactgtga 44369965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 56555903 - 56555838
Alignment:
Q  133 ttctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcacttt 200  Q
    |||||| ||| |||||||| |||  |||||||||||| |  ||||||||||||||||||| |||||||    
T  56555903 ttctccgtttcaaaatgagtgtcgctttagcaaaaaaaa--aaattgttttaaaatgaatgtcacttt 56555838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 115; Significance: 4e-58; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 144 - 364
Target Start/End: Complemental strand, 12828867 - 12828648
Alignment:
Q  144 aaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccc 243  Q
    |||||||  ||||||||||| ||||| | |||||||||| |||||||||||||||||||| |||||||||||||||||       |||||||||||||||    
T  12828867 aaaatgaatgtcattttagccaaaaaaa-aaaattgtttcaaaatgaatttcactttacatttccaatacaactttaatttttttcttccaactttaccc 12828769  T
Q  244 tcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatg 343  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| |||       |||||||||| ||||||||||||||||| |||||| |     
T  12828768 tcaataaatacttcaacttttctctcacacaattttcaatgcaactttaagcttgtctttttcttataaagtaagggcagtttagtaaaagtgttatgtc 12828669  T
Q  344 taataattattttatttcatt 364  Q
    |||| ||||||| ||||||||    
T  12828668 taatgattatttcatttcatt 12828648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 173 - 374
Target Start/End: Original strand, 29915535 - 29915738
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnn-cttccaactttaccctcaataaatactccaacttttctctcac 271  Q
    |||||||||| ||||||||| |||||||||| |||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||    
T  29915535 aaaattgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttcttccaactttaccctcaataaatactccaacttttctctcac 29915634  T
Q  272 acaattttcaatgcaactttaagtttgnnnnnnncttataaagt-gagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaa 370  Q
    ||||||| ||||||||||||| |||||       ||||||||||  | ||||||||||||||| |||||| | |||| ||||||| |||  |||||||||    
T  29915635 acaatttccaatgcaactttatgtttgtctttttcttataaagtaaatggcagtttagtaaaagtgttatttctaattattatttcattcaatttcttaa 29915734  T
Q  371 tatg 374  Q
    ||||    
T  29915735 tatg 29915738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 173 - 417
Target Start/End: Original strand, 29927201 - 29927446
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnn-cttccaactttaccctcaataaatactccaacttttctctcac 271  Q
    |||||||||| ||||||||| |||||||||| |||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||     
T  29927201 aaaattgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttcttccaactttaccctcaataaatactccaacttttctctcat 29927300  T
Q  272 acaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaat 371  Q
      | |||||||||||||||||||||||       |||||||||| |||  |  ||||||||| |||||| | |||| ||||||| |||  |||| |||||    
T  29927301 gtagttttcaatgcaactttaagtttgtctttttcttataaagtaaggatatgttagtaaaagtgttatgtctaatgattatttcattctattttttaat 29927400  T
Q  372 atgcgtgtcaaactcttaaacgacacttattgtgaaatagagggag 417  Q
     || |||||||| |||||||||||| | |||||||||  |||||||    
T  29927401 ctgtgtgtcaaaatcttaaacgacattcattgtgaaacggagggag 29927446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 135 - 298
Target Start/End: Complemental strand, 17345327 - 17345167
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttcca 234  Q
    |||||||| |||||||| ||||||||||  |||||     |||||||||||||||||| |||||||||| ||| |||||||||||||       ||||||    
T  17345327 ctccatttcaaaatgagtgtcattttagtcaaaaa-----aattgttttaaaatgaatatcactttacatttctaatacaactttaatatttttcttcca 17345233  T
Q  235 actttaccctcaataaatactccaacttttc--tctcacacaattttcaatgcaactttaagtttg 298  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||    
T  17345232 actttaccctcaataaatactccaacttttctctctcacacaattttcaatgcaacttgaagtttg 17345167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 173 - 298
Target Start/End: Complemental strand, 31275800 - 31275674
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnn-cttccaactttaccctcaataaatactccaacttttctctcac 271  Q
    |||||||||| ||||||||| |||||||||| |||||||||||||||||        |||||||||||||||||||||||||||||||||||| ||||||    
T  31275800 aaaattgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttcttccaactttaccctcaataaatactccaacttttttctcac 31275701  T
Q  272 acaattttcaatgcaactttaagtttg 298  Q
    |||||||||||||||||||||||||||    
T  31275700 acaattttcaatgcaactttaagtttg 31275674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 184 - 371
Target Start/End: Complemental strand, 26669245 - 26669058
Alignment:
Q  184 aaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaattttcaat 283  Q
    ||||||||| |||||||| | |||||||||||||||||       | |||||||||| ||||||||||  ||||||||||||||||||| ||||||||||    
T  26669245 aaaatgaatgtcactttatatttccaatacaactttaatttttgtcatccaactttatcctcaataaaatctccaacttttctctcacataattttcaat 26669146  T
Q  284 gcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaat 371  Q
    |||||||||| ||||       |||||||||| |||||| ||||||||||| |||||||  ||||||||||| |||  ||||||||||    
T  26669145 gcaactttaattttgtctttttcttataaagtaagggcaatttagtaaaaacgttatatccaataattatttcattatatttcttaat 26669058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 164 - 298
Target Start/End: Original strand, 34576529 - 34576665
Alignment:
Q  164 aaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttt 263  Q
    |||||| | |||||||||||||||||||| ||| |||||| |||||||||||||||||       |||||||||||| |||||||||||||| |||||||    
T  34576529 aaaaaaaaaaaaattgttttaaaatgaatatcattttacatttccaatacaactttaatttttttcttccaactttatcctcaataaatacttcaacttt 34576628  T
Q  264 --tctctcacacaattttcaatgcaactttaagtttg 298  Q
      |||||||||||||||||||||||||||||||||||    
T  34576629 tctctctcacacaattttcaatgcaactttaagtttg 34576665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 249 - 413
Target Start/End: Complemental strand, 4132027 - 4131866
Alignment:
Q  249 aaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaata 348  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||        |||||||| | | || ||||||||||||||||||||| ||||     
T  4132027 aaatactccaacttttctttcacacaattttcaatgcaa-tttaagttt--ttttttcttataaaataaaggtagtttagtaaaaatgttatatataatg 4131931  T
Q  349 attattttatttcatttcttaatatgcgtgtcaaactcttaaacgacacttattgtgaaatagag 413  Q
    ||||||| |||| ||||||||||||| ||||||||  ||||||||||||| ||||||||||||||    
T  4131930 attatttaattttatttcttaatatgtgtgtcaaaaccttaaacgacactcattgtgaaatagag 4131866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 144 - 374
Target Start/End: Complemental strand, 23936765 - 23936540
Alignment:
Q  144 aaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccc 243  Q
    |||||||| |||| ||||||||||||    ||| ||||| ||||||||| | |||||||| || |||| ||||||| |       |||||||||||||||    
T  23936765 aaaatgagtgtcactttagcaaaaaa----aaactgtttcaaaatgaatgttactttacattttcaatgcaactttcatttttttcttccaactttaccc 23936670  T
Q  244 tcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagt-gagggcagtttagtaaaaatgttatat 342  Q
    |||||| |||||||||| |||||||  ||||||||||||||||||||||| ||||       ||||||||||  |||||| || ||||||||||||||||    
T  23936669 tcaatatatactccaacctttctct--cacaattttcaatgcaactttaaatttgtttttttcttataaagtaaagggcaattcagtaaaaatgttatat 23936572  T
Q  343 gtaataattattttatttcatttcttaatatg 374  Q
     |||| ||||||| ||| ||||||||||||||    
T  23936571 ctaatgattatttcattccatttcttaatatg 23936540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 173 - 372
Target Start/End: Complemental strand, 4124013 - 4123814
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||||||||| ||||||||| |||||||||| ||  |||||||||||||       ||| |||||||||||||||||||||||||||||||||| |||||    
T  4124013 aaaattgtttcaaaatgaatgtcactttacatttttaatacaactttaatttttttctttcaactttaccctcaataaatactccaacttttctttcaca 4123914  T
Q  273 caattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttc-atttcttaat 371  Q
    ||||||||||||||| ||||||||||       |||||||| | |||  |||||| ||||| | |||| |||||| |||| |||| ||| ||||||||||    
T  4123913 caattttcaatgcaa-tttaagtttgttttttccttataaaataaggatagtttaataaaattattatgtgtaatgattaatttaattctatttcttaat 4123815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 173 - 298
Target Start/End: Original strand, 26189502 - 26189629
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctct--ca 270  Q
    |||||||||| ||||||||| |   |||||| ||||||| |||||||||       ||||||||||||||||||||||||||||||| ||||||||  ||    
T  26189502 aaaattgtttcaaaatgaatgttgttttacatttccaatgcaactttaatatttttcttccaactttaccctcaataaatactccaatttttctctcaca 26189601  T
Q  271 cacaattttcaatgcaactttaagtttg 298  Q
    ||||||||||||||||||||||||||||    
T  26189602 cacaattttcaatgcaactttaagtttg 26189629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 11785259 - 11785141
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||||||||| ||||||| | |||||||||| |||||||||||||||||       ||||||||||||||||||||||||| || |||||||||||||||    
T  11785259 aaaattgtttcaaaatga-tgtcactttacatttccaatacaactttaatttttt-cttccaactttaccctcaataaatattctaacttttctctcaca 11785162  T
Q  273 caattttcaatgcaactttaa 293  Q
    ||||||||||| |||||||||    
T  11785161 caattttcaatacaactttaa 11785141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 173 - 371
Target Start/End: Complemental strand, 34439571 - 34439368
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttct-----c 267  Q
    |||||||||| ||||||||| ||| |||||| ||||||||||||||| |       |||||||||||||| |||||| ||||||||||||||||     |    
T  34439571 aaaattgtttcaaaatgaatgtcattttacatttccaatacaactttcattcttt-cttccaactttaccttcaatatatactccaacttttcttttctc 34439473  T
Q  268 tcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtga-gggcagtttagtaaaaatgttatatgtaataattattttatttcatttc 366  Q
    | ||||||||| ||||||||||||| |||||       |||||||| | | ||||| |||| |||||||||||||| |||| ||||||| ||||||||||    
T  34439472 ttacacaatttccaatgcaactttatgtttgtctttttcttataaaataaagggcaatttaataaaaatgttatatctaatgattatttcatttcatttc 34439373  T
Q  367 ttaat 371  Q
    |||||    
T  34439372 ttaat 34439368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 176 - 298
Target Start/End: Original strand, 8052342 - 8052463
Alignment:
Q  176 attgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaa 275  Q
    ||||||||||||||||| |||||||| | ||| |||||||||||||       || |||| ||||||||||||||||||||||||| ||||||| |||||    
T  8052342 attgttttaaaatgaatgtcactttatatttctaatacaactttaatttttt-ctcccaattttaccctcaataaatactccaactattctctcccacaa 8052440  T
Q  276 ttttcaatgcaactttaagtttg 298  Q
    ||||||||||||||||| |||||    
T  8052441 ttttcaatgcaactttaggtttg 8052463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 173 - 298
Target Start/End: Complemental strand, 10494920 - 10494795
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||||||||||||||||||| ||| |||||| ||||||| |||||||||       ||| ||||||| |||  |||||||| |||||||||||||||| |    
T  10494920 aaaattgttttaaaatgaatgtcagtttacatttccaattcaactttaatttttttctttcaactttgcccaaaataaatagtccaacttttctctcata 10494821  T
Q  273 caattttcaatgcaactttaagtttg 298  Q
    |||||||||||||||||| |||||||    
T  10494820 caattttcaatgcaacttaaagtttg 10494795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 138 - 264
Target Start/End: Complemental strand, 4132163 - 4132042
Alignment:
Q  138 cattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaact 237  Q
    ||||||| |||||||||||||||||| |||||     |||||||||||||||||| |||||||||| ||  |||||||||||||       ||| |||||    
T  4132163 cattttataatgagcgtcattttagccaaaaa-----aattgttttaaaatgaatgtcactttacatttttaatacaactttaatttttttctttcaact 4132069  T
Q  238 ttaccctcaataaatactccaactttt 264  Q
    |||||||||||||||||||||||||||    
T  4132068 ttaccctcaataaatactccaactttt 4132042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 173 - 293
Target Start/End: Original strand, 32258716 - 32258838
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccct-caataaatactccaac-ttttctctca 270  Q
    |||||||||| ||||||||| |||||||||| || ||||||||||||||       |||||||||||| |||  || |||||||||||| ||||||||||    
T  32258716 aaaattgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaacctaaaaaaaatactccaactttttctctca 32258815  T
Q  271 cacaattttcaatgcaactttaa 293  Q
    |||||||||||||||||||||||    
T  32258816 cacaattttcaatgcaactttaa 32258838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 177 - 298
Target Start/End: Original strand, 30627089 - 30627210
Alignment:
Q  177 ttgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaat 276  Q
    |||||| ||||| ||| |||||||| | || ||||||||||||||       ||  |||||||||||||||||||||||| ||||||||||||| |||||    
T  30627089 ttgtttcaaaataaatgtcactttatattttcaatacaactttaatttttttctctcaactttaccctcaataaatactcaaacttttctctcaaacaat 30627188  T
Q  277 tttcaatgcaactttaagtttg 298  Q
    ||||||||||||||||| ||||    
T  30627189 tttcaatgcaactttaaatttg 30627210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 1924751 - 1924634
Alignment:
Q  254 ctccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattat 353  Q
    |||||||||||||||||||||||||||||||||||||||| ||||       |||||||||| || | ||||||||||||| |||||||  ||| |||||    
T  1924751 ctccaacttttctctcacacaattttcaatgcaactttaattttgtattttccttataaagtaagagaagtttagtaaaaacgttatatccaatgattat 1924652  T
Q  354 tttatttcatttcttaat 371  Q
    || |||  ||||||||||    
T  1924651 ttcattatatttcttaat 1924634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 173 - 293
Target Start/End: Original strand, 6143078 - 6143200
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaac--ttttctctca 270  Q
    |||||||||||||||||||| ||| |||||| ||||||| |||||||||       |||||||||||||| ||||||||||||  |||  |||||||| |    
T  6143078 aaaattgttttaaaatgaatgtcattttacatttccaattcaactttaatttttttcttccaactttaccttcaataaatacttaaacttttttctctta 6143177  T
Q  271 cacaattttcaatgcaactttaa 293  Q
    ||||||||| ||||||| |||||    
T  6143178 cacaatttttaatgcaattttaa 6143200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 177 - 293
Target Start/End: Original strand, 6140598 - 6140715
Alignment:
Q  177 ttgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctc--acaca 274  Q
    |||||||||||||||| || ||||||| ||||||| |||||||||       |||||||||||||| ||||||||||||  ||||||||||||  |||||    
T  6140598 ttgttttaaaatgaatgtcgctttacatttccaattcaactttaatttttt-cttccaactttaccttcaataaatacttaaacttttctctcttacaca 6140696  T
Q  275 attttcaatgcaactttaa 293  Q
    ||||||||||||| |||||    
T  6140697 attttcaatgcaattttaa 6140715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 177 - 293
Target Start/End: Complemental strand, 19689988 - 19689874
Alignment:
Q  177 ttgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaat 276  Q
    |||||||||||||||| | |||||||| ||| ||||||||||||        ||||||||||||  || || ||||||||||||||||||||||||||||    
T  19689988 ttgttttaaaatgaatgttactttacatttctaatacaacttta--tattttcttccaactttaatctaaaaaaatactccaacttttctctcacacaat 19689891  T
Q  277 tttcaatgcaactttaa 293  Q
    | ||||| |||||||||    
T  19689890 tgtcaatacaactttaa 19689874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 229 - 298
Target Start/End: Original strand, 25932679 - 25932750
Alignment:
Q  229 cttccaactttaccctcaataaatactccaactttt--ctctcacacaattttcaatgcaactttaagtttg 298  Q
    |||| ||||||| ||||||||||||||| |||||||  |||||||||||||||||||| |||||||||||||    
T  25932679 cttctaactttatcctcaataaatactcaaacttttttctctcacacaattttcaatgtaactttaagtttg 25932750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Complemental strand, 4464256 - 4464205
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||||||| ||||| |||||||||||||||||||||    
T  4464256 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtga 4464205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Complemental strand, 33621623 - 33621572
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||||||| ||||| |||||||||||||||||||||    
T  33621623 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtga 33621572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 35218639 - 35218690
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  35218639 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 35218690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 600 - 651
Target Start/End: Complemental strand, 21037419 - 21037368
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| |||||||||||  || |||||||||||||||||||||||||||    
T  21037419 ggtcttagatgaagtggtaattcactgaaaataaactcacacacaactgtga 21037368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 600 - 651
Target Start/End: Complemental strand, 33704345 - 33704294
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||  ||||||||||| ||| |||||||||||||||||||||||||||    
T  33704345 ggtcttaaatgaagtggtaatccactgaaaataaactcacacacaactgtga 33704294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 651
Target Start/End: Complemental strand, 28323060 - 28323010
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| ||||||||||||||| ||||| ||||||||||||||| |||||    
T  28323060 gtcttagatgaagtggtaaaccactgaaactaaactcacacacaattgtga 28323010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 651
Target Start/End: Original strand, 28592128 - 28592178
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| | || |||||| |||||||||||||||||||||||||||||||    
T  28592128 gtcttagataaattggtaatccattgaaaataaactcacacacaactgtga 28592178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 320 - 369
Target Start/End: Complemental strand, 19689858 - 19689809
Alignment:
Q  320 gcagtttagtaaaaatgttatatgtaataattattttatttcatttctta 369  Q
    |||||||||||||| |||||||| |||||||||||| ||| |||||||||    
T  19689858 gcagtttagtaaaattgttatatctaataattatttcattccatttctta 19689809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 651
Target Start/End: Original strand, 29009650 - 29009700
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| |||||||||||  || | |||||||||||||||||||||||||    
T  29009650 gtcttagatgaagtggtaattcactaaaaataaactcacacacaactgtga 29009700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 651
Target Start/End: Original strand, 32353941 - 32353991
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| | || |||||| | |||||||||||||||||||||||||||||    
T  32353941 gtcttagataaaatggtaatcaattgaaaataaactcacacacaactgtga 32353991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 19416819 - 19416883
Alignment:
Q  136 tccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttaca 203  Q
    |||||||||||||||| |||| ||||  ||||||   |||||||||| ||||||||| ||||||||||    
T  19416819 tccattttaaaatgagtgtcactttaataaaaaa---aaaattgtttcaaaatgaatgtcactttaca 19416883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 24163906 - 24163846
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcacttt 200  Q
    |||| |||||||||||| ||||||||||| |||||     |||||||||||||||||| |||||||    
T  24163906 ctccgttttaaaatgagtgtcattttagccaaaaa-----aattgttttaaaatgaatgtcacttt 24163846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 1924818 - 1924774
Alignment:
Q  177 ttgttttaaaatgaatttcactttacaattccaatacaactttaa 221  Q
    |||||||||||||||| ||| |||||| || ||||||||||||||    
T  1924818 ttgttttaaaatgaatgtcattttacattttcaatacaactttaa 1924774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 2e-51; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 173 - 398
Target Start/End: Complemental strand, 4840885 - 4840660
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||||||||  ||||||||| |||||||||| |||||||||||||||||       |||||||||||||||||||||||||||| |||||||||| ||||    
T  4840885 aaaattgttccaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactttaccctcaataaatactcaaacttttctcccaca 4840786  T
Q  273 caattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaata 372  Q
    || |||||||||||||||||| ||||       |||||||||| |||||||||||||||||| |||||||  ||| ||||||| ||| ||||||||||||    
T  4840785 cagttttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttagtaaaaacgttatatccaatgattatttcattccatttcttaata 4840686  T
Q  373 tgcgtgtcaaactcttaaacgacact 398  Q
    || ||| ||||  || ||||||||||    
T  4840685 tgtgtgccaaagcctaaaacgacact 4840660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 140 - 360
Target Start/End: Original strand, 7743361 - 7743582
Alignment:
Q  140 ttttaaaatgagcgtcattttagcaaaaaagataaaatt-gttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactt 238  Q
    |||||||||||| |||| |||||||||||| | ||||   |||||||||||||| |||||||||| |||||||||||||||||       ||||||||||    
T  7743361 ttttaaaatgagtgtcactttagcaaaaaaaaaaaaaaaagttttaaaatgaatgtcactttacatttccaatacaactttaatctttttcttccaactt 7743460  T
Q  239 taccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgtt 338  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||       |||||||||| ||||||  ||||||||| ||||    
T  7743461 taccctcaataaatagtccaacttttctctcacacaattttcaatgcaactttaaatttgtctttttcttataaagtaagggcaacttagtaaaagtgtt 7743560  T
Q  339 atatgtaataattattttattt 360  Q
    |||| | || ||||||| ||||    
T  7743561 atatctgatgattatttcattt 7743582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 173 - 371
Target Start/End: Complemental strand, 1298938 - 1298740
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||||| ||| ||||||||| |||||||||| ||| |||||||||||||       | || ||||||| ||||||||||| |||||||||||||||||||    
T  1298938 aaaattatttcaaaatgaatgtcactttacatttctaatacaactttaatttttctcatcgaactttatcctcaataaattctccaacttttctctcaca 1298839  T
Q  273 caattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaat 371  Q
     |||||||||||||||||||| ||||       |||||||||| |||||| ||||||||||| |||||||  ||| ||||||| |||| ||||||||||    
T  1298838 taattttcaatgcaactttaattttgtctttttcttataaagtaagggcaatttagtaaaaacgttatattcaatgattatttcattttatttcttaat 1298740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 135 - 298
Target Start/End: Original strand, 2459733 - 2459894
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttcca 234  Q
    |||| |||||||||||| ||   ||||||||||||    ||||||||||||||||||| || ||||||| ||||||| |||||||||       ||||||    
T  2459733 ctccgttttaaaatgagtgttgctttagcaaaaaa----aaattgttttaaaatgaatgtcgctttacatttccaatgcaactttaatttttttcttcca 2459828  T
Q  235 actttaccctcaataaatactccaacttt--tctctcacacaattttcaatgcaactttaagtttg 298  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  2459829 actttaccctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttg 2459894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 229 - 408
Target Start/End: Original strand, 37106912 - 37107091
Alignment:
Q  229 cttccaactttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaag--tttgnnnnnnncttataaagtgagggcagttt 326  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||        |||||||||| |||||| |||    
T  37106912 cttccaactttacccttaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttttcttttttgcttataaagtaagggcaattt 37107011  T
Q  327 agtaaaaatgttatatgtaataattattttatttcatttcttaatatgcgtgtcaaactcttaaacgacacttattgtgaaa 408  Q
    ||||||| |||| | |  ||||||||||| ||| |||||||||  ||| ||||||||  ||||||||||||| |||||||||    
T  37107012 agtaaaagtgttgtgtcaaataattatttcattccatttctta--atgtgtgtcaaaaccttaaacgacactcattgtgaaa 37107091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 144 - 298
Target Start/End: Original strand, 1360145 - 1360296
Alignment:
Q  144 aaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccc 243  Q
    |||||||| |||| ||||||||||||   |||||||||| ||||||||| ||||||| || |||||||||||||||||       || |||| |||||||    
T  1360145 aaaatgagtgtcactttagcaaaaaa---aaaattgtttcaaaatgaatgtcactttgcatttccaatacaactttaatttttttctcccaattttaccc 1360241  T
Q  244 tcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttg 298  Q
    |||||||||||| |||||||||||| | |||||||||||||||||||||||||||    
T  1360242 tcaataaatacttcaacttttctcttaaacaattttcaatgcaactttaagtttg 1360296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 177 - 355
Target Start/End: Original strand, 24775187 - 24775365
Alignment:
Q  177 ttgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaat 276  Q
    |||||||||||||| | |||||||||| || |||||||| |||||       || |||| ||||||||||||||||||| ||||||||||||||||||||    
T  24775187 ttgttttaaaatgattgtcactttacattttcaatacaattttaatttttttctcccaagtttaccctcaataaatacttcaacttttctctcacacaat 24775286  T
Q  277 tttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattt 355  Q
    |||||||  |||||||||||||       |||||||||| || ||| |||||||||| |||||||| |||| |||||||    
T  24775287 tttcaatataactttaagtttgtttttttcttataaagtaagagcattttagtaaaagtgttatatctaatgattattt 24775365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 177 - 297
Target Start/End: Original strand, 33093366 - 33093488
Alignment:
Q  177 ttgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttct--ctcacaca 274  Q
    |||||| ||||||||| |||||||||| || ||||||||||||||       ||||||||||||||||||||||||| ||||||||||||  ||||||||    
T  33093366 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatattccaacttttctccctcacaca 33093465  T
Q  275 attttcaatgcaactttaagttt 297  Q
    |||||||||||||||||||||||    
T  33093466 attttcaatgcaactttaagttt 33093488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 135 - 340
Target Start/End: Complemental strand, 43388849 - 43388648
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttcca 234  Q
    |||| ||| |||||||| ||||||||||| ||||| ||    |||||| ||||||||| || ||||||| || |||| |||||||||       ||||||    
T  43388849 ctccgtttcaaaatgagtgtcattttagccaaaaaaat----ttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaatttttttcttcca 43388754  T
Q  235 actttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaa 334  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||       |||||||||| |||  | ||||||||||     
T  43388753 actttaccctcaataaatactcaaacttttctctcacataattttcaatacaactttaagtttgtatttttcttataaagtaaggttattttagtaaaat 43388654  T
Q  335 tgttat 340  Q
    ||||||    
T  43388653 tgttat 43388648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 135 - 408
Target Start/End: Complemental strand, 43344412 - 43344146
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttcca 234  Q
    |||| ||| |||||||| |||||||||||||||||     |||||||| ||||||||| |||| ||| | || ||||||||||||||       ||||||    
T  43344412 ctccgtttcaaaatgagtgtcattttagcaaaaaa-----aattgtttcaaaatgaatgtcaccttatattttcaatacaactttaattttt--cttcca 43344320  T
Q  235 actttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaa 334  Q
    |||||||| | ||||||||||| || |||||||||||| |||||||||| |||||||||  ||        |||||||||| ||||  ||||| |||||     
T  43344319 actttacctttaataaatactctaatttttctctcacataattttcaatacaactttaaacttatctttttcttataaagtaagggtggtttaataaaat 43344220  T
Q  335 tgttatatgtaataattattttatttcatttcttaatatgcgtgtcaaactcttaaacgacacttattgtgaaa 408  Q
    |||||| | |||| ||||||| |||| ||||| |||| |  |||||||| |||||||||||||| ||| |||||    
T  43344219 tgttatgtctaatgattatttcatttgatttcataatttatgtgtcaaaatcttaaacgacactcattatgaaa 43344146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 184 - 378
Target Start/End: Complemental strand, 36360520 - 36360328
Alignment:
Q  184 aaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaattttcaat 283  Q
    ||||||||| ||||||| || || ||||||||||||||       ||| ||||||||||||||||| |||||| ||||||||||  ||||||||||||||    
T  36360520 aaaatgaatatcactttgcattttcaatacaactttaatttttttctttcaactttaccctcaatatatactcaaacttttctc--acacaattttcaat 36360423  T
Q  284 gcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaatatgcgtg 378  Q
     |||||||||||||        |||||||| | ||||||||||||||||| |||||| | |||| ||||||| ||||||||  ||||| ||||||    
T  36360422 acaactttaagtttatctttttcttataaaataagggcagtttagtaaaagtgttatgtctaatgattatttcatttcattctttaatttgcgtg 36360328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 198 - 333
Target Start/End: Original strand, 43460792 - 43460927
Alignment:
Q  198 tttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagttt 297  Q
    |||||| |||||||||||||||||       |||||||| |||||||||||||||||| |||||||||||||||| |||||||||| ||||||||| |||    
T  43460792 tttacatttccaatacaactttaagttttctcttccaacgttaccctcaataaatacttcaacttttctctcacataattttcaatacaactttaatttt 43460891  T
Q  298 gnnnnnnncttataaagtgagggcagtttagtaaaa 333  Q
    |       |||||||||| |||||||||||||||||    
T  43460892 gtcttttccttataaagtaagggcagtttagtaaaa 43460927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 135 - 298
Target Start/End: Original strand, 4536534 - 4536690
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttcca 234  Q
    |||| ||| |||||||| |||| |||||| |||||    ||||||||| ||||||||| |||||||||| |||||||||||||||||       || |||    
T  4536534 ctccgtttcaaaatgagtgtcactttagccaaaaa----aaattgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttctccca 4536629  T
Q  235 actttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttg 298  Q
    ||||||||||||| |||||||| |||||   |||||||||||||||||||||||||||| ||||    
T  4536630 actttaccctcaacaaatactctaactt---tctcacacaattttcaatgcaactttaaatttg 4536690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 173 - 294
Target Start/End: Complemental strand, 10581016 - 10580893
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttc--tctca 270  Q
    |||||||||| ||||||||| |||||||| | || ||||||||||||||       |||||||||||||||||||||||||||| ||||||||  |||||    
T  10581016 aaaattgtttcaaaatgaatatcactttatattttcaatacaactttaatttttttcttccaactttaccctcaataaatactcaaacttttctctctca 10580917  T
Q  271 cacaattttcaatgcaactttaag 294  Q
    ||||||||||||| ||||||||||    
T  10580916 cacaattttcaatacaactttaag 10580893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 175 - 297
Target Start/End: Original strand, 41984414 - 41984538
Alignment:
Q  175 aattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctct--caca 272  Q
    |||||||| ||||| ||| || ||||||| || ||||||||||||||       |||||||||||||| | |||||||||||||||||||||||  ||||    
T  41984414 aattgtttcaaaataaatatcgctttacattttcaatacaactttaatttttttcttccaactttacctttaataaatactccaacttttctctcacaca 41984513  T
Q  273 caattttcaatgcaactttaagttt 297  Q
    |||||||||||||||||||||||||    
T  41984514 caattttcaatgcaactttaagttt 41984538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 255 - 371
Target Start/End: Original strand, 34225826 - 34225942
Alignment:
Q  255 tccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattatt 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||       |||||||||| |||||| |||||||||| | |||| | |||| ||||||    
T  34225826 tccaacttttctctcacacaattttcaatgcaactttaagtttgtctttttcttataaagtaagggcaatttagtaaaattattatgtctaatgattatt 34225925  T
Q  355 ttatttcatttcttaat 371  Q
    | |||||||| ||||||    
T  34225926 tcatttcattccttaat 34225942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 188 - 333
Target Start/End: Original strand, 16316718 - 16316863
Alignment:
Q  188 tgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaattttcaatgcaa 287  Q
    ||||| |||||||| | |||||||||||||||||       ||||||| |||||  |||||||||| |||||||||| ||||||||||||||||||||||    
T  16316718 tgaatgtcactttatatttccaatacaactttaatttttttcttccaaatttactttcaataaatattccaacttttatctcacacaattttcaatgcaa 16316817  T
Q  288 ctttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaa 333  Q
    |||||| ||||       |||||| ||| |||||| ||||||||||    
T  16316818 ctttaattttgtctttttcttatacagtaagggcaatttagtaaaa 16316863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 177 - 378
Target Start/End: Complemental strand, 29795344 - 29795152
Alignment:
Q  177 ttgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaat 276  Q
    |||||| ||||||||| |||||||||| |||||||||||||||||       |||||||||||||||||         |||||||||||| |||||||||    
T  29795344 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactttaccctc---------tccaacttttctttcacacaat 29795254  T
Q  277 tttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaatatgcg 376  Q
    |||||||||||||||||  |||       |||||||| | ||||||||||||||||| | |||| | |||| ||||||| ||| ||||  ||||| ||||    
T  29795253 tttcaatgcaactttaaagttgtctttttcttataaaataagggcagtttagtaaaagtattatgtctaatgattatttcattccattcattaatctgcg 29795154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 173 - 298
Target Start/End: Complemental strand, 776043 - 775917
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctc--a 270  Q
    |||||||||| ||||||||| || ||||||| || |||| |||||||||       |||| ||||||||||||||||||||||| |||||||| |||  |    
T  776043 aaaattgtttcaaaatgaatgtcgctttacattttcaatgcaactttaatttttt-cttctaactttaccctcaataaatactctaacttttccctccca 775945  T
Q  271 cacaattttcaatgcaactttaagtttg 298  Q
    ||||||||||||||||||||||||||||    
T  775944 cacaattttcaatgcaactttaagtttg 775917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 180 - 298
Target Start/End: Complemental strand, 39866824 - 39866704
Alignment:
Q  180 ttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaactttt--ctctcacacaatt 277  Q
    ||||||||||||| || ||||||| ||||||| ||| |||||       |||||||||||||| ||||||||||||| || ||||  |||||||||||||    
T  39866824 ttttaaaatgaatgtcgctttacatttccaatgcaaatttaatttttttcttccaactttaccttcaataaatactcaaatttttttctctcacacaatt 39866725  T
Q  278 ttcaatgcaactttaagtttg 298  Q
    |||||| ||||||||||||||    
T  39866724 ttcaatacaactttaagtttg 39866704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 18374922 - 18374802
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||||||||| ||||||||| |||||||||| |||||||| || |||||       |||||||||||||||||||||||||||| |||||||   || ||    
T  18374922 aaaattgtttgaaaatgaatgtcactttacatttccaatataattttaatttttttcttccaactttaccctcaataaatactcaaactttttcttctca 18374823  T
Q  273 caattttcaatgcaactttaa 293  Q
    ||||||||||| ||| |||||    
T  18374822 caattttcaatacaattttaa 18374802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 255 - 361
Target Start/End: Complemental strand, 4766288 - 4766182
Alignment:
Q  255 tccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattatt 354  Q
    ||||||||||||||||||||||||||||||||||||||| ||||       |||||||||| | ||||||||||||| || |||||||  ||| ||||||    
T  4766288 tccaacttttctctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttagtaataacgttatatccaatgattatt 4766189  T
Q  355 ttatttc 361  Q
    | |||||    
T  4766188 tcatttc 4766182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 40410518 - 40410635
Alignment:
Q  254 ctccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattat 353  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||       |||||||||| ||||||||||| |||||  |||||||  ||| |||||    
T  40410518 ctccaacttttctctgacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttaataaaagcgttatatccaatgattat 40410617  T
Q  354 tttatttcatttcttaat 371  Q
     | ||| |||||||||||    
T  40410618 gtcattccatttcttaat 40410635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 183 - 374
Target Start/End: Complemental strand, 40987419 - 40987239
Alignment:
Q  183 taaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaattttcaa 282  Q
    |||||||||| || ||||||| || ||||||||||||||       |||||||||||||||||         ||||||||||||||||||  ||||||||    
T  40987419 taaaatgaatgtcgctttacattttcaatacaactttaatttttttcttccaactttaccctc---------tccaacttttctctcaca--attttcaa 40987331  T
Q  283 tgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaatatg 374  Q
    ||||||||||| |||        |||||||||| ||| || |||||||||| |||||| | |||| ||||||| |||||||| |||||||||    
T  40987330 tgcaactttaaatttatctttttcttataaagtaaggacaatttagtaaaagtgttatgtctaatgattatttcatttcattccttaatatg 40987239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 173 - 298
Target Start/End: Original strand, 6591959 - 6592084
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaa-nnnnnnncttccaactttaccctcaataaatactccaacttttctctcac 271  Q
    |||||||||||||||||||| ||| |||||| |||||||||||||||||        || |||||||| |  ||||| |||||||||||||||||||  |    
T  6591959 aaaattgttttaaaatgaatatcattttacatttccaatacaactttaattttttttctcccaactttcctttcaatgaatactccaacttttctcttgc 6592058  T
Q  272 acaattttcaatgcaactttaagtttg 298  Q
    | |||||||||||| ||||||||||||    
T  6592059 ataattttcaatgc-actttaagtttg 6592084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 229 - 298
Target Start/End: Original strand, 25332620 - 25332691
Alignment:
Q  229 cttccaactttaccctcaataaatactccaacttt--tctctcacacaattttcaatgcaactttaagtttg 298  Q
    |||||||||||| ||||||||||||||||||||||  ||||||| |||||||||||| ||||| ||||||||    
T  25332620 cttccaactttatcctcaataaatactccaacttttctctctcatacaattttcaatacaactctaagtttg 25332691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 256 - 355
Target Start/End: Complemental strand, 14378323 - 14378224
Alignment:
Q  256 ccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattt 355  Q
    |||||||||||||| || |||||||||||||||||||| |||        |||||||||| ||||||||||||||||| ||||||||  ||| |||||||    
T  14378323 ccaacttttctctcgcataattttcaatgcaactttaaatttatctttttcttataaagtaagggcagtttagtaaaagtgttatattaaatgattattt 14378224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 355
Target Start/End: Original strand, 1381744 - 1381915
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||||||||||||||||||| | |||||||| |||||||| |||||| |       ||||||||||||||         | |||||||||||||||  ||    
T  1381744 aaaattgttttaaaatgaatgttactttacatttccaatataactttgatttttttcttccaactttacc---------ttctccaacttttctct--ca 1381832  T
Q  273 caattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattt 355  Q
    ||||||||||||||| |||||||||        |||||||||| || |||||||||||||| |||||| | |||| |||||||    
T  1381833 caattttcaatgcaattttaagtttttctttttcttataaagtaagagcagtttagtaaaagtgttatgtctaatgattattt 1381915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 218
Target Start/End: Complemental strand, 45372725 - 45372645
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactt 218  Q
    |||||||| |||||||  |||| ||||||||||||   |||||||||||||||||||| |||||||||| || |||||||||||    
T  45372725 ctccatttcaaaatgaatgtcactttagcaaaaaa---aaaattgttttaaaatgaatgtcactttacattttcaatacaactt 45372645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 10639605 - 10639656
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  10639605 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 10639656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Complemental strand, 11459844 - 11459793
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||||||||||||||| |||||||||||||||    
T  11459844 ggtcttagatgaagtggtaatccattgaaaataaacacacacacaactgtga 11459793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Complemental strand, 34460498 - 34460447
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  34460498 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 34460447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 37197609 - 37197660
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  37197609 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 37197660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 45125164 - 45125215
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  45125164 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 45125215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 4566281 - 4566159
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctc--a 270  Q
    |||||| |||||||||  || |||||||||| ||  |||||||||||||        || |||||||| | |||||||| | |||||||||||||||  |    
T  4566281 aaaattattttaaaatatatgtcactttacatttttaatacaactttaatttttttttttcaactttatcatcaataaagagtccaacttttctctctca 4566182  T
Q  271 cacaattttcaatgcaactttaa 293  Q
    |||||||||||||||||||||||    
T  4566181 cacaattttcaatgcaactttaa 4566159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 601 - 651
Target Start/End: Complemental strand, 23839987 - 23839937
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  23839987 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 23839937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 601 - 651
Target Start/End: Original strand, 29659218 - 29659268
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  29659218 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 29659268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 601 - 651
Target Start/End: Original strand, 33083554 - 33083604
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  33083554 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 33083604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 601 - 651
Target Start/End: Complemental strand, 42578296 - 42578246
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  42578296 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 42578246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 601 - 651
Target Start/End: Original strand, 43778468 - 43778518
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  43778468 gtcttagatgaagtggtaatccaatgaaaataaactcacacacaactgtga 43778518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 234 - 298
Target Start/End: Original strand, 14511515 - 14511579
Alignment:
Q  234 aactttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttg 298  Q
    ||||||| ||||||||||||||| ||||||||| |  |||||||||||||| |||||||| ||||    
T  14511515 aactttatcctcaataaatactctaacttttcttttgcacaattttcaatgtaactttaaatttg 14511579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 600 - 651
Target Start/End: Complemental strand, 19537436 - 19537385
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| ||||||||||| |||||||||||||||    
T  19537436 ggtcttagatgaagtggtaatccactgaaaataaacacacacacaactgtga 19537385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 600 - 651
Target Start/End: Complemental strand, 26605753 - 26605702
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||| ||||||||||||||||    
T  26605753 ggtcttagatgaagtggtaatccactgaaaataaattcacacacaactgtga 26605702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 651
Target Start/End: Complemental strand, 19048882 - 19048832
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| ||||||||||||||| ||||| ||||||||||||||| |||||    
T  19048882 gtcttagatgaagtggtaaaccactgaaactaaactcacacacaattgtga 19048832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 651
Target Start/End: Original strand, 39831444 - 39831494
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| ||||||||||||||| ||||| ||||||||||||||| |||||    
T  39831444 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaattgtga 39831494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 294
Target Start/End: Original strand, 42969967 - 42970005
Alignment:
Q  256 ccaacttttctctcacacaattttcaatgcaactttaag 294  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  42969967 ccaacttttttctcacacaattttcaatgcaactttaag 42970005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 34225767 - 34225815
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaa 221  Q
    |||||||||| ||||||||| |||||||||| || ||||||||||||||    
T  34225767 aaaattgtttcaaaatgaatgtcactttacattttcaatacaactttaa 34225815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 45148110 - 45148062
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaa 221  Q
    |||||||||||||||||||| |||||||||| || ||||| ||||||||    
T  45148110 aaaattgttttaaaatgaatgtcactttacattttcaataaaactttaa 45148062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 604 - 651
Target Start/End: Complemental strand, 11708803 - 11708756
Alignment:
Q  604 ttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||| ||||||||||| ||| ||||||||||| |||||||||||||||    
T  11708803 ttagatgaagtggtaatccactgaaaataaacccacacacaactgtga 11708756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 12566169 - 12566112
Alignment:
Q  140 ttttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcacttt 200  Q
    |||||||||||| ||||||||| |||||||   |||||||||| ||||||||| |||||||    
T  12566169 ttttaaaatgagtgtcattttaacaaaaaa---aaaattgtttcaaaatgaatgtcacttt 12566112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 264 - 298
Target Start/End: Original strand, 14698075 - 14698109
Alignment:
Q  264 tctctcacacaattttcaatgcaactttaagtttg 298  Q
    |||||||||||||||||||| ||||||||||||||    
T  14698075 tctctcacacaattttcaatacaactttaagtttg 14698109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 651
Target Start/End: Original strand, 44181887 - 44181937
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| | ||||| ||| ||| |||||||||||||||||||||||||||    
T  44181887 gtcttagattaagtgataatccactgaaaataaactcacacacaactgtga 44181937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 14378375 - 14378334
Alignment:
Q  180 ttttaaaatgaatttcactttacaattccaatacaactttaa 221  Q
    ||||||||||||| |||||||||| || ||||||||||||||    
T  14378375 ttttaaaatgaatgtcactttacattttcaatacaactttaa 14378334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 294
Target Start/End: Complemental strand, 45148047 - 45148014
Alignment:
Q  261 ttttctctcacacaattttcaatgcaactttaag 294  Q
    ||||||||||||||||||| ||||||||||||||    
T  45148047 ttttctctcacacaatttttaatgcaactttaag 45148014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 14697981 - 14698054
Alignment:
Q  144 aaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaa 221  Q
    |||||||| ||| ||||||||||||    |||||||||| ||||||||| || ||||||| || |||| |||||||||    
T  14697981 aaaatgagtgtcgttttagcaaaaa----aaaattgtttcaaaatgaatgtcgctttacattttcaatgcaactttaa 14698054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 361 - 425
Target Start/End: Original strand, 29412166 - 29412230
Alignment:
Q  361 catttcttaatatgcgtgtcaaactcttaaacgacacttattgtgaaatagagggagcataaaat 425  Q
    ||||||||||||| ||||| |||  ||||||||||| | ||| |||||| ||||||| |||||||    
T  29412166 catttcttaatatacgtgtaaaaaccttaaacgacattaattttgaaatggagggagtataaaat 29412230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 604 - 644
Target Start/End: Original strand, 40825161 - 40825201
Alignment:
Q  604 ttaggtgaagtggtaaaccattgaaaataaactcacacaca 644  Q
    |||| ||||||| ||| ||||||||||||||||||||||||    
T  40825161 ttagatgaagtgataatccattgaaaataaactcacacaca 40825201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 6e-48; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 135 - 371
Target Start/End: Complemental strand, 166841 - 166609
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttcca 234  Q
    |||| ||| |||||||| |||  ||||||||||||    ||||||||| ||||||||| |||||||||| |||||||||||||||||       ||||||    
T  166841 ctccgtttcaaaatgagtgtcgctttagcaaaaaa----aaattgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttcca 166746  T
Q  235 actttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaa 334  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       | |||||    |||||||||||||||||     
T  166745 actttaccctcaataaatactccaacttttttctcacacaattttcaatgcaactttaagtttgtctttttcatataatacaagggcagtttagtaaaag 166646  T
Q  335 tgttatatgtaataattattttatttcatttcttaat 371  Q
    |||||| | |||| ||||||| |||||||| ||||||    
T  166645 tgttatttctaatgattatttcatttcattccttaat 166609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 173 - 298
Target Start/End: Complemental strand, 38982303 - 38982178
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||||||||||||||||||| |||||||| | |||||||||||||||||       || ||||||||||||||||||||||||| |||||||||||| ||    
T  38982303 aaaattgttttaaaatgaatgtcactttatatttccaatacaactttaatttttttctcccaactttaccctcaataaatactcaaacttttctctcgca 38982204  T
Q  273 caattttcaatgcaactttaagtttg 298  Q
    ||||||||||||||||||||||||||    
T  38982203 caattttcaatgcaactttaagtttg 38982178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 135 - 374
Target Start/End: Complemental strand, 4751725 - 4751487
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnn-cttcc 233  Q
    |||| ||| |||||||| |||  |||||||||||| ||||  |||||| ||||||||| |||||||| | ||| |||||||||||||        |||||    
T  4751725 ctccgtttcaaaatgagtgtcgctttagcaaaaaaaataa--ttgtttcaaaatgaatgtcactttatatttctaatacaactttaattttttttcttcc 4751628  T
Q  234 aactttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaa 333  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||       | ||||||   ||||  |||||||||||    
T  4751627 aactttaccctcaataaatactccaacttttttctcacacaattttcaattcaactttaagtttgtttttttcatataaaacaagggttgtttagtaaaa 4751528  T
Q  334 atgttatatgtaataattattttatttcatttcttaatatg 374  Q
     |||||| | |||| ||||||| |||||||| |||||||||    
T  4751527 gtgttatgtctaatgattatttcatttcattccttaatatg 4751487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 135 - 298
Target Start/End: Original strand, 34171125 - 34171283
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttcca 234  Q
    ||||||||||||||||| ||| |||||  ||||||    ||||||||||||||||||| |||||||||| || ||||||||||||||        |||||    
T  34171125 ctccattttaaaatgagtgtcgttttataaaaaaa----aaattgttttaaaatgaatgtcactttacattttcaatacaactttaattttttt-ttcca 34171219  T
Q  235 actttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttg 298  Q
    |||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  34171220 actttaccttcaataaatactcaaacttttctctcacagaattttcaatgcaactttaagtttg 34171283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 173 - 371
Target Start/End: Original strand, 36660422 - 36660618
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||||||||| ||||||||| |||||||||| || ||||||||||||||       |||||||||||||||||||||||||||||| |||||||||  ||    
T  36660422 aaaattgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatactccagcttttctct--ca 36660519  T
Q  273 caattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaat 371  Q
    |||||||  || ||||||||||||||       |||||||||| ||| || |||||||||| |||||| | |||| ||||||| |||||||| ||||||    
T  36660520 caattttttatacaactttaagtttgtctttttcttataaagtaaggacattttagtaaaagtgttatgtctaatgattatttcatttcattccttaat 36660618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 173 - 298
Target Start/End: Complemental strand, 33585133 - 33585006
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttc--tctca 270  Q
    |||||||||||||||||||  |||||||||| || ||||||||||||||       |||||||||||||| ||||||||||||||||||||||  |||||    
T  33585133 aaaattgttttaaaatgaacgtcactttacattttcaatacaactttaatttttttcttccaactttaccttcaataaatactccaacttttctgtctca 33585034  T
Q  271 cacaattttcaatgcaactttaagtttg 298  Q
    ||||||||||||||||||||||||||||    
T  33585033 cacaattttcaatgcaactttaagtttg 33585006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 173 - 298
Target Start/End: Complemental strand, 42329704 - 42329577
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttt--tctctca 270  Q
    |||||||||| ||||||||| |||||||||| |||||||||||||||||       |||||||||||||||| |||||||||| |||||||  |||||||    
T  42329704 aaaattgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactttacccttaataaatacttcaacttttctctctca 42329605  T
Q  271 cacaattttcaatgcaactttaagtttg 298  Q
    ||||||||||||||||||||||||||||    
T  42329604 cacaattttcaatgcaactttaagtttg 42329577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 181 - 355
Target Start/End: Original strand, 15400174 - 15400349
Alignment:
Q  181 tttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaattttc 280  Q
    |||||||||||| |||||||||| |||||||||||||||||       |||||||||||| ||||||||||||||| ||||||||||||| ||||||| |    
T  15400174 tttaaaatgaatgtcactttacatttccaatacaactttaattttcttcttccaactttatcctcaataaatactcaaacttttctctcatacaatttcc 15400273  T
Q  281 aatgcaactttaagtttgnnnnnnncttataaagt-gagggcagtttagtaaaaatgttatatgtaataattattt 355  Q
    |||| ||||||||||||        ||||||||||  |||| | |||||||||| |||||||| ||||||||||||    
T  15400274 aatgaaactttaagttttcctttttcttataaagtaaagggaattttagtaaaagtgttatatctaataattattt 15400349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 175 - 374
Target Start/End: Complemental strand, 4742423 - 4742223
Alignment:
Q  175 aattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnn-cttccaactttaccctcaataaatactccaacttttctctcacac 273  Q
    |||||||| ||||||||| |||||||| | ||| |||||||||||||        |||||||||||||||||||||||||||||||||||| ||||||||    
T  4742423 aattgtttcaaaatgaatgtcactttatatttctaatacaactttaattttttttcttccaactttaccctcaataaatactccaacttttttctcacac 4742324  T
Q  274 aattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaatat 373  Q
    |||||||||| ||||||||||||||       | ||||||   ||||  ||||||||||| |||||| | | || ||||||| |||||||| ||||||||    
T  4742323 aattttcaattcaactttaagtttgtttttttcatataaaacaagggttgtttagtaaaagtgttatgtctgatgattatttcatttcattccttaatat 4742224  T
Q  374 g 374  Q
    |    
T  4742223 g 4742223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 173 - 292
Target Start/End: Original strand, 13066708 - 13066827
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||||||||| ||||||||| ||| |||||| |||||||||||||||||        |||||||||||||||||||||||||||||||||||||||  ||    
T  13066708 aaaattgtttcaaaatgaatgtcattttacatttccaatacaactttaattttttttttccaactttaccctcaataaatactccaacttttctcttgca 13066807  T
Q  273 caattttcaatgcaacttta 292  Q
    ||||||||||||||||||||    
T  13066808 caattttcaatgcaacttta 13066827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 173 - 291
Target Start/End: Original strand, 4371358 - 4371476
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||||||||| ||||||||  |||||||||| |||||||||||||||||       || | ||||||||||||||||||||||| |||||||||||||||    
T  4371358 aaaattgtttcaaaatgaacgtcactttacatttccaatacaactttaatttttttctccaaactttaccctcaataaatactcaaacttttctctcaca 4371457  T
Q  273 caattttcaatgcaacttt 291  Q
    |||||||||||||||||||    
T  4371458 caattttcaatgcaacttt 4371476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 184 - 371
Target Start/End: Original strand, 36783361 - 36783548
Alignment:
Q  184 aaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaattttcaat 283  Q
    ||||| ||| |||||||||| ||||||||||||| |||       |||| ||||||||||| | ||||| ||||||||||||||||||||||||||||||    
T  36783361 aaaattaatgtcactttacatttccaatacaactctaatttttttcttctaactttacccttagtaaattctccaacttttctctcacacaattttcaat 36783460  T
Q  284 gcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaat 371  Q
    |||||||||| ||||       | ||  |||| |||||| ||||||||||||||||| | |||| ||||||| ||||||| |||||||    
T  36783461 gcaactttaaatttgtctttttcataacaagtaagggcaatttagtaaaaatgttatgtctaatgattatttcatttcatctcttaat 36783548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 135 - 298
Target Start/End: Complemental strand, 4833825 - 4833664
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttcca 234  Q
    ||||||||||||||||  |||  ||||||||||||    ||||||||| ||||||||| |  ||||||| || |||| |||||||||       ||||||    
T  4833825 ctccattttaaaatgaatgtcgctttagcaaaaaa----aaattgtttcaaaatgaatgttgctttacattttcaatgcaactttaatttttttcttcca 4833730  T
Q  235 actttaccctcaataaatactccaacttttctc--tcacacaattttcaatgcaactttaagtttg 298  Q
    |||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||    
T  4833729 actttaccctcaataaatactcaaacttttctctttcacacaattttcaatgcaactttaagtttg 4833664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 135 - 298
Target Start/End: Complemental strand, 29653706 - 29653545
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttcca 234  Q
    |||| |||||||||||| ||| ||||| |||||||    ||||||||  ||||||||| ||| |||||| |||||||||||||||||       ||||||    
T  29653706 ctccgttttaaaatgagtgtcgttttaacaaaaaa----aaattgttgcaaaatgaatgtcattttacatttccaatacaactttaatttttttcttcca 29653611  T
Q  235 actttaccctcaataaatactccaacttttc--tctcacacaattttcaatgcaactttaagtttg 298  Q
    |||||||||||||||||||||| ||||||||  |||||||||||||  ||||||||||||||||||    
T  29653610 actttaccctcaataaatactctaacttttctctctcacacaatttctaatgcaactttaagtttg 29653545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 177 - 298
Target Start/End: Complemental strand, 793760 - 793637
Alignment:
Q  177 ttgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctc--acaca 274  Q
    |||||| ||||||||| |||||||||| |||||||||||||||||       ||||||||| |||||||||||||||||  ||||||||||||  |||||    
T  793760 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactctaccctcaataaatacttaaacttttctctctcacaca 793661  T
Q  275 attttcaatgcaactttaagtttg 298  Q
    ||||||||||||||||||||||||    
T  793660 attttcaatgcaactttaagtttg 793637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 255 - 383
Target Start/End: Original strand, 31889796 - 31889924
Alignment:
Q  255 tccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattatt 354  Q
    ||||||||||||||||||||||||||||||||||||||| ||||       |||||||||| ||||||||||||| |||| |||||||  ||||||||||    
T  31889796 tccaacttttctctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttagtgaaaacgttatattcaataattatt 31889895  T
Q  355 ttatttcatttcttaatatgcgtgtcaaa 383  Q
    | ||| ||||||||||| || ||||||||    
T  31889896 tcattccatttcttaatctgtgtgtcaaa 31889924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 173 - 298
Target Start/End: Complemental strand, 33822661 - 33822534
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctc--a 270  Q
    ||||||| || ||||||||| |||||||||| || ||||||||||||||       ||| |||||||||| |||||||||||| |||||||||||||  |    
T  33822661 aaaattgattcaaaatgaatgtcactttacattttcaatacaactttaattttgttctttcaactttaccttcaataaatacttcaacttttctctctca 33822562  T
Q  271 cacaattttcaatgcaactttaagtttg 298  Q
    ||||||||||||||||||||||||||||    
T  33822561 cacaattttcaatgcaactttaagtttg 33822534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 175 - 293
Target Start/End: Original strand, 27810343 - 27810461
Alignment:
Q  175 aattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacaca 274  Q
    |||||||| ||||||||| |||||||||| || ||||||||||||||       ||| |||||||| ||||||||||||||| ||||||| |||||||||    
T  27810343 aattgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttctttcaactttatcctcaataaatactcaaacttttttctcacaca 27810442  T
Q  275 attttcaatgcaactttaa 293  Q
    ||||||||| |||||||||    
T  27810443 attttcaatacaactttaa 27810461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 173 - 298
Target Start/End: Original strand, 28640077 - 28640202
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||||| ||||||||| ||| |||||||||| || |||| |||||||||       || |||||||||||||||||||||||| |||||||||||||  |    
T  28640077 aaaattattttaaaataaatgtcactttacattttcaattcaactttaatttttttctcccaactttaccctcaataaatacttcaacttttctctcgaa 28640176  T
Q  273 caattttcaatgcaactttaagtttg 298  Q
    ||||||||||| ||||||||||||||    
T  28640177 caattttcaatacaactttaagtttg 28640202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 173 - 298
Target Start/End: Original strand, 39059801 - 39059925
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||||||||| ||||||||| |  ||||||| || ||||||||||||||       |||| |||||||||||||||||||||||||| |||| ||||| |    
T  39059801 aaaattgtttcaaaatgaatgttgctttacattttcaatacaactttaatttttt-cttctaactttaccctcaataaatactccaaattttttctcata 39059899  T
Q  273 caattttcaatgcaactttaagtttg 298  Q
    ||||||||||||||||||||||||||    
T  39059900 caattttcaatgcaactttaagtttg 39059925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 173 - 292
Target Start/End: Original strand, 12992059 - 12992176
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||||||||| ||||||||| ||| |||||| ||| |||||||||||||        ||||||||||| |||||||||||||||||||||||||||  ||    
T  12992059 aaaattgtttcaaaatgaatgtcattttacatttctaatacaactttaatttttt--ttccaactttatcctcaataaatactccaacttttctcttgca 12992156  T
Q  273 caattttcaatgcaacttta 292  Q
    ||||||||||||||||||||    
T  12992157 caattttcaatgcaacttta 12992176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 135 - 417
Target Start/End: Complemental strand, 14980231 - 14979965
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttcca 234  Q
    |||| ||| |||||||| |||| |||||| ||||| ||    |||||| ||||||||| |||||||||| |||||||||||||||||       ||||||    
T  14980231 ctccgtttcaaaatgagagtcactttagctaaaaaaat----ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 14980136  T
Q  235 actttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaa 334  Q
    |||||||||||         ||||||||||   || ||||||||||||||||||||||| ||||       |||||||||| |||||||||| ||||||     
T  14980135 actttaccctc---------tccaactttt---tctcacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaag 14980048  T
Q  335 tgttatatgtaataattattttatttcatttcttaatatgcgtgtcaaactcttaaacgacacttattgtgaaatagagggag 417  Q
    ||||||||  ||| ||||||| ||| ||||||||||| || ||| ||||  || || ||||||| ||| |||||  |||||||    
T  14980047 tgttatatccaatgattatttcattccatttcttaatctgtgtgccaaagcctaaagcgacactcattttgaaacggagggag 14979965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 171 - 374
Target Start/End: Original strand, 17674201 - 17674396
Alignment:
Q  171 ataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctca 270  Q
    |||||||||||| ||||||||| |||||||||  || ||||| ||||||||       | || ||||||| |||||||||||||| ||||||||||||||    
T  17674201 ataaaattgtttcaaaatgaatgtcactttacgttttcaataaaactttaattttttacgtctaactttatcctcaataaatacttcaacttttctctca 17674300  T
Q  271 cacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaa 370  Q
    |||||||||| || |||||| ||             ||||||||| ||||||||||| |||||||||||| | |||| ||||||| ||||||||| ||||    
T  17674301 cacaattttctatacaacttaaa--------aaaaattataaagtaagggcagtttaataaaaatgttatgtttaatgattatttcatttcattttttaa 17674392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 184 - 298
Target Start/End: Complemental strand, 32690878 - 32690764
Alignment:
Q  184 aaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaattttcaat 283  Q
    ||||||||| |||||||||| ||| |||||||||||||       ||  ||||||||| ||||||||||||| ||||||||||||| |||||||||||||    
T  32690878 aaaatgaatgtcactttacatttcaaatacaactttaatttttttctctcaactttactctcaataaatacttcaacttttctctcgcacaattttcaat 32690779  T
Q  284 gcaactttaagtttg 298  Q
    ||||||||| |||||    
T  32690778 gcaactttaggtttg 32690764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 12167688 - 12167570
Alignment:
Q  254 ctccaacttttctctcacacaa-ttttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataatta 352  Q
    |||||||||||||||||||||| |||||||||||||||||||||||       |||||||||| ||||||||||||||||| |||| | | |||| ||||    
T  12167688 ctccaacttttctctcacacaaattttcaatgcaactttaagtttgaccttttcttataaagtaagggcagtttagtaaaagtgttttgtctaatgatta 12167589  T
Q  353 ttttatttcatttcttaat 371  Q
    ||| |||  ||||||||||    
T  12167588 tttcattcaatttcttaat 12167570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 180 - 364
Target Start/End: Complemental strand, 43258002 - 43257827
Alignment:
Q  180 ttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaatttt 279  Q
    ||||||||||||| |||||||||| |||||||| ||||||||       ||| |||||||| |||         || ||||| || ||||||||||||||    
T  43258002 ttttaaaatgaatgtcactttacatttccaatataactttaatttttttctttcaactttatcct---------cttcaactgttttctcacacaatttt 43257912  T
Q  280 caatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatt 364  Q
    |||||||||||||||||||       |||||||||| |||||||||||||| || |||||| | |||| ||||||| ||||||||    
T  43257911 caatgcaactttaagtttgtctatttcttataaagtaagggcagtttagtataagtgttatgtctaatgattatttcatttcatt 43257827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 233 - 340
Target Start/End: Complemental strand, 27652419 - 27652310
Alignment:
Q  233 caactttaccctcaataaatactccaacttttc--tctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagta 330  Q
    ||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||| ||||       |||||||||| |||  | |||||||    
T  27652419 caactttaccctcaataaataatccaacttttctctctcacacaattttcaatgcaactttaaatttgtctttttcttataaagtaaggttattttagta 27652320  T
Q  331 aaaatgttat 340  Q
    ||| ||||||    
T  27652319 aaattgttat 27652310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 229 - 297
Target Start/End: Original strand, 29044770 - 29044839
Alignment:
Q  229 cttccaactttaccctcaataaatactccaacttttctct-cacacaattttcaatgcaactttaagttt 297  Q
    |||||||||||| ||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||    
T  29044770 cttccaactttatcctcaataaatgctcaaacttttctctccacacaattttcaatgcaactttaagttt 29044839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 173 - 374
Target Start/End: Complemental strand, 31557493 - 31557297
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||||||||| ||||||||| ||| |||||| || ||||||||||||||       ||||||||||||   ||||||||||||       ||||||||||    
T  31557493 aaaattgtttcaaaatgaatgtcattttacattttcaatacaactttaatttttttcttccaactttattttcaataaatacta------ttctctcaca 31557400  T
Q  273 caattttcaatgcaactttaagtttgnnnnnnncttataaagt-gagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaat 371  Q
    ||||||||||||||||||||||||||       ||||||||||  ||||  ||||| ||||| | |||||| |||| ||||||| |||  ||||||||||    
T  31557399 caattttcaatgcaactttaagtttgtctttttcttataaagtaaagggttgtttactaaaagtattatatttaatgattatttcattctatttcttaat 31557300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 173 - 297
Target Start/End: Original strand, 33741460 - 33741584
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||||||||| || |||||| |||||||||| || |||| ||||||| |       |||| ||||||||||| |||| |||||| |||||||||  ||||    
T  33741460 aaaattgtttcaatatgaatgtcactttacattttcaatgcaactttcatttttttcttcaaactttacccttaatatatactctaacttttctaccaca 33741559  T
Q  273 caattttcaatgcaactttaagttt 297  Q
    |||||| ||||||||||||||||||    
T  33741560 caatttccaatgcaactttaagttt 33741584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 173 - 298
Target Start/End: Complemental strand, 36296290 - 36296165
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctc--tca 270  Q
    |||||||||||||||||||| || |||| || |||||||||||||||||        |||||||||||  | |  |||| |||||||||||||||  |||    
T  36296290 aaaattgttttaaaatgaatatcgctttccatttccaatacaactttaatttttt--ttccaactttattcccggtaaacactccaacttttctcgctca 36296193  T
Q  271 cacaattttcaatgcaactttaagtttg 298  Q
    ||||||||||||||||||||||||||||    
T  36296192 cacaattttcaatgcaactttaagtttg 36296165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 254 - 364
Target Start/End: Original strand, 16886152 - 16886255
Alignment:
Q  254 ctccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattat 353  Q
    ||||||||||||| ||||||||||||||||||||||||||||||         ||||||||| ||||||||||||||||  |||||  | ||||||||||    
T  16886152 ctccaacttttctatcacacaattttcaatgcaactttaagttt-------tgttataaagtaagggcagtttagtaaatgtgttacgtctaataattat 16886244  T
Q  354 tttatttcatt 364  Q
    || ||||||||    
T  16886245 ttcatttcatt 16886255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 255 - 371
Target Start/End: Complemental strand, 4011736 - 4011620
Alignment:
Q  255 tccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattatt 354  Q
    |||||||||| |||||||||||||||||||||||||||| |||        |||||||| | |||||| ||||| ||||| |||||||  ||| ||||||    
T  4011736 tccaacttttttctcacacaattttcaatgcaactttaattttatctttttcttataaaataagggcattttagaaaaaacgttatatccaatgattatt 4011637  T
Q  355 ttatttcatttcttaat 371  Q
    | ||| |||||||||||    
T  4011636 tgattccatttcttaat 4011620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 4824938 - 4824989
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  4824938 ggtcttagatgaagtggtaatccattgaaaataaactcacacacaactgtga 4824989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 276 - 417
Target Start/End: Complemental strand, 4967546 - 4967405
Alignment:
Q  276 ttttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaatatgc 375  Q
    |||||||||||||||||| ||||        ||||||||| |||||||||||||||||  |||||||  ||| ||||||| ||| ||||||||||| ||     
T  4967546 ttttcaatgcaactttaattttgtcttttttttataaagtaagggcagtttagtaaaagcgttatatccaatgattatttcattccatttcttaatctgt 4967447  T
Q  376 gtgtcaaactcttaaacgacacttattgtgaaatagagggag 417  Q
    ||||||||  || || ||||||| ||| |||||  |||||||    
T  4967446 gtgtcaaagcctaaagcgacactcattttgaaacggagggag 4967405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Complemental strand, 21018352 - 21018301
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  21018352 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 21018301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Complemental strand, 29266004 - 29265953
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  29266004 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 29265953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 31909384 - 31909435
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  31909384 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 31909435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 32143413 - 32143464
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  32143413 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 32143464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 35317696 - 35317747
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  35317696 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 35317747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 244 - 404
Target Start/End: Original strand, 1513043 - 1513205
Alignment:
Q  244 tcaataaatactccaacttttctc--tcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttata 341  Q
    ||||||| ||||| ||||||||||  || |||||||||||| |||||||||||||||       ||| |||||| |||| |||||   |||| | ||||     
T  1513043 tcaataagtactctaacttttctccctctcacaattttcaaagcaactttaagtttgtttttctcttgtaaagtaagggtagtttgaaaaaagtattatg 1513142  T
Q  342 tgtaataattattttatttcatttcttaatatgcgtgtcaaactcttaaacgacacttattgt 404  Q
    | |||| ||||||| ||||||||||||||| || ||||| || ||||||| ||| || |||||    
T  1513143 tttaatgattatttcatttcatttcttaatttgtgtgtcgaaatcttaaatgactctcattgt 1513205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 257 - 371
Target Start/End: Complemental strand, 7388264 - 7388152
Alignment:
Q  257 caacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattatttt 356  Q
    ||||||||||||||||  ||||||||||||||||||| |||        |||||||| | ||| || |||||||||||| |||| | |||| ||||||||    
T  7388264 caacttttctctcaca--attttcaatgcaactttaaatttatctttttcttataaaataaggacaatttagtaaaaatattatgtctaatgattatttt 7388167  T
Q  357 atttcatttcttaat 371  Q
    ||||||||| |||||    
T  7388166 atttcatttattaat 7388152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 601 - 649
Target Start/End: Complemental strand, 23262672 - 23262624
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgt 649  Q
    ||||||| ||||||||||| ||| |||||||||||||||||||||||||    
T  23262672 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgt 23262624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 600 - 651
Target Start/End: Complemental strand, 13204086 - 13204035
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||| ||||||||    
T  13204086 ggtcttagatgaagtggtaatccactgaaaataaactcacacataactgtga 13204035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 177 - 298
Target Start/End: Complemental strand, 32963161 - 32963041
Alignment:
Q  177 ttgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttc--tctcacaca 274  Q
    |||||| |||||||||  ||||||||| ||||||||||||||||         ||| ||||||||||||||||||||||| ||||||||  | ||| |||    
T  32963161 ttgtttcaaaatgaataccactttacatttccaatacaactttattttttt--ttcaaactttaccctcaataaatactctaacttttctttttcaaaca 32963064  T
Q  275 attttcaatgcaactttaagtttg 298  Q
    |||| |||||||| ||||||||||    
T  32963063 atttccaatgcaa-tttaagtttg 32963041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 651
Target Start/End: Complemental strand, 2971112 - 2971062
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| ||||||||||| |||  ||||||||||||||||||||||||||    
T  2971112 gtcttagatgaagtggtaatccaccgaaaataaactcacacacaactgtga 2971062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 373
Target Start/End: Complemental strand, 8961107 - 8960993
Alignment:
Q  258 aacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattatttta 357  Q
    |||||||||||||||||||||||| ||||||||||| |||        |||||||| | | | ||||||||||||| |||||| | |||| |||||||||    
T  8961107 aacttttctctcacacaattttcattgcaactttaaatttatctttttcttataaaat-aagacagtttagtaaaagtgttatgtctaatgattatttta 8961009  T
Q  358 tttcatttcttaatat 373  Q
    ||  ||| ||||||||    
T  8961008 ttatattccttaatat 8960993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 600 - 645
Target Start/End: Complemental strand, 12257485 - 12257440
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaa 645  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||    
T  12257485 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaa 12257440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 257 - 294
Target Start/End: Original strand, 33693810 - 33693847
Alignment:
Q  257 caacttttctctcacacaattttcaatgcaactttaag 294  Q
    |||||||| |||||||||||||||||||||||||||||    
T  33693810 caacttttttctcacacaattttcaatgcaactttaag 33693847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 306 - 371
Target Start/End: Original strand, 34919863 - 34919928
Alignment:
Q  306 cttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaat 371  Q
    |||||||||| ||||||||||||||||| || ||| |  ||| |||||||||||||||| ||||||    
T  34919863 cttataaagtaagggcagtttagtaaaattgctatgtccaatgattattttatttcattccttaat 34919928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 4011794 - 4011746
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaa 221  Q
    |||||||||||||||||||  |||||||||| |||| ||||||||||||    
T  4011794 aaaattgttttaaaatgaacgtcactttacatttccgatacaactttaa 4011746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 12167752 - 12167693
Alignment:
Q  158 tttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaacttta 220  Q
    ||||||||||||   |||||||||||||||||||| ||||| |||| || |||||||||||||    
T  12167752 tttagcaaaaaa---aaaattgttttaaaatgaatgtcactctacattttcaatacaacttta 12167693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 31889737 - 31889785
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaa 221  Q
    |||||||||| ||||| ||| |||||||||| |||||||||||||||||    
T  31889737 aaaattgtttcaaaataaatgtcactttacatttccaatacaactttaa 31889785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 34919719 - 34919796
Alignment:
Q  140 ttttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaa 221  Q
    ||||||||||||||||  |||||||||||    |||||||||| ||||||||| |||||||||| | | |||| ||||||||    
T  34919719 ttttaaaatgagcgtcgctttagcaaaaa----aaaattgtttcaaaatgaatgtcactttacattcctaatataactttaa 34919796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 257 - 293
Target Start/End: Complemental strand, 41845380 - 41845344
Alignment:
Q  257 caacttttctctcacacaattttcaatgcaactttaa 293  Q
    |||||||||| ||||||||||||||||||||||||||    
T  41845380 caacttttctatcacacaattttcaatgcaactttaa 41845344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 604 - 651
Target Start/End: Complemental strand, 40177749 - 40177702
Alignment:
Q  604 ttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| ||||    
T  40177749 ttagatgaagtggtaatccactgaaaataaactcacacacaacggtga 40177702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 298
Target Start/End: Original strand, 41566861 - 41566904
Alignment:
Q  255 tccaacttttctctcacacaattttcaatgcaactttaagtttg 298  Q
    |||||||||||||||  | |||||||||||||||||||||||||    
T  41566861 tccaacttttctctcgtataattttcaatgcaactttaagtttg 41566904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 134 - 200
Target Start/End: Complemental strand, 15776671 - 15776610
Alignment:
Q  134 tctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcacttt 200  Q
    ||||| |||||||||||| |||||||||| ||||||     |||||||||||||||||| |||||||    
T  15776671 tctccgttttaaaatgagtgtcattttagtaaaaaa-----aattgttttaaaatgaatgtcacttt 15776610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 205
Target Start/End: Complemental strand, 4967605 - 4967539
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaat 205  Q
    |||| ||| |||||||| ||||||||| |||||||    ||||||||||||||||||| ||||||| ||||    
T  4967605 ctccgtttcaaaatgagtgtcattttaacaaaaaa----aaattgttttaaaatgaatgtcacttttcaat 4967539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 611 - 648
Target Start/End: Complemental strand, 6021110 - 6021073
Alignment:
Q  611 aagtggtaaaccattgaaaataaactcacacacaactg 648  Q
    ||||||||| ||| ||||||||||||||||||||||||    
T  6021110 aagtggtaatccactgaaaataaactcacacacaactg 6021073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 7388339 - 7388291
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaa 221  Q
    |||||||||||||||||||| |||||||| | || |||||||| |||||    
T  7388339 aaaattgttttaaaatgaatgtcactttatattttcaatacaattttaa 7388291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 7731751 - 7731703
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaa 221  Q
    |||||||||||||||||||| |||||||| | || ||| ||||||||||    
T  7731751 aaaattgttttaaaatgaatgtcactttatattttcaaaacaactttaa 7731703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 8961169 - 8961121
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaa 221  Q
    |||||| ||| |||||| || |||||||||||||||||| |||||||||    
T  8961169 aaaattatttcaaaatggatgtcactttacaattccaatgcaactttaa 8961121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 98; Significance: 6e-48; HSPs: 86)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 135 - 371
Target Start/End: Complemental strand, 37225787 - 37225555
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttcca 234  Q
    |||| |||||||||||| ||| ||||||| |||||    ||||||||| ||||||||| |||||||||| |||||||||||||||||       ||||||    
T  37225787 ctccgttttaaaatgagtgtcgttttagctaaaaa----aaattgtttcaaaatgaatgtcactttacatttccaatacaactttaattcttttcttcca 37225692  T
Q  235 actttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaa 334  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||       |||||||||| ||| |||||||||||||     
T  37225691 actttaccctcaataaatacgctaacttttctctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaggacagtttagtaaaag 37225592  T
Q  335 tgttatatgtaataattattttatttcatttcttaat 371  Q
    | ||||||  ||| ||||||| |||  ||||||||||    
T  37225591 tattatatccaatgattatttcattgtatttcttaat 37225555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 177 - 371
Target Start/End: Complemental strand, 647745 - 647552
Alignment:
Q  177 ttgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaat 276  Q
    |||||| ||||||| | ||| |||||| || ||||||||||||||       |||||||||||||||||||||||||||| ||||||||||| ||| |||    
T  647745 ttgtttaaaaatga-tatcattttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatactctaacttttctcttacagaat 647647  T
Q  277 tttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaat 371  Q
    ||||||||||||||||||||||       |||||||||| ||||||||||||||||| |||||||| |||| ||||||| |||||||||||||||    
T  647646 tttcaatgcaactttaagtttgtctttttcttataaagtaagggcagtttagtaaaactgttatatctaatgattatttcatttcatttcttaat 647552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 173 - 409
Target Start/End: Complemental strand, 46363169 - 46362932
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnn-cttccaactttaccctcaataaatactccaacttttctctcac 271  Q
    |||||||||| ||||||||| |||||||||| || ||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||    
T  46363169 aaaattgtttcaaaatgaatgtcactttacattttcaatacaactttaattttttttcttccaactttaccctcaataaatactccaacttttctctcac 46363070  T
Q  272 acaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaat 371  Q
    ||||||| |||||||||||||| ||||       |||||||||| ||| |||||||||||||||||||  | |||| ||||||| |||  ||| ||||||    
T  46363069 acaatttacaatgcaactttaaatttgtatttttcttataaagtaaggacagtttagtaaaaatgttaggtctaatgattatttcattcaattccttaat 46362970  T
Q  372 atgcgtgtcaaactcttaaacgacacttattgtgaaat 409  Q
    ||| |||  | || || |||||||||| ||| ||||||    
T  46362969 atgtgtgcaatacgctgaaacgacactcattttgaaat 46362932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 173 - 391
Target Start/End: Original strand, 38457455 - 38457673
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||| ||||| ||||||||| ||| |||||| || ||||||||||||||       | ||||||||||||||||||||||||||||||||||||||||||    
T  38457455 aaaaatgtttcaaaatgaatatcattttacattttcaatacaactttaatttttttcatccaactttaccctcaataaatactccaacttttctctcaca 38457554  T
Q  273 caattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaata 372  Q
    ||||||||||||||| |||||||||        || ||||||| | ||||||||||||||| |||||| |||||| ||||||| |||  ||||||||||     
T  38457555 caattttcaatgcaattttaagtttatctttttctaataaagtaatggcagtttagtaaaagtgttatgtgtaatgattatttcattcaatttcttaatt 38457654  T
Q  373 tgcgtgtcaaactcttaaa 391  Q
    || || ||||| |||||||    
T  38457655 tgtgtctcaaaatcttaaa 38457673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 173 - 340
Target Start/End: Complemental strand, 54933363 - 54933194
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttc--tctca 270  Q
    |||||||||| ||||||||| |||||||||| ||||||| |||||||||       |||||||||||||||||||||||||||||||||||||  |||||    
T  54933363 aaaattgtttcaaaatgaatgtcactttacatttccaatgcaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctctca 54933264  T
Q  271 cacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttat 340  Q
    ||||||||||||||||||||||||||||       |||||||||| |||  | |||||||||| ||||||    
T  54933263 cacaattttcaatgcaactttaagtttgtcattttcttataaagtaaggttattttagtaaaattgttat 54933194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 175 - 371
Target Start/End: Original strand, 83293 - 83488
Alignment:
Q  175 aattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacaca 274  Q
    |||||||| ||||||||| ||| |||||| || ||||||||||||||       |||||||||||||||||| ||||||||| |||||||||||||| ||    
T  83293 aattgtttcaaaatgaatgtcattttacattttcaatacaactttaatttttt-cttccaactttaccctcattaaatactctaacttttctctcacgca 83391  T
Q  275 attttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaat 371  Q
    ||||||||||||||||||||||||       |||||||||| |||| |||||||||||| |||| | | |||| |||| || |||||||| ||||||    
T  83392 attttcaatgcaactttaagtttgtctttttcttataaagtaagggtagtttagtaaaagtgttgtgtctaatgattaattcatttcattccttaat 83488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 140 - 383
Target Start/End: Complemental strand, 26965686 - 26965456
Alignment:
Q  140 ttttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaacttt 239  Q
    |||||||||||| |||| |||||| |||||    | ||||||| ||||||||| |||||||||| || ||||||||||||||       |||||||||||    
T  26965686 ttttaaaatgagtgtcactttagccaaaaa----atattgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaacttt 26965591  T
Q  240 accctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgtta 339  Q
    ||||||         ||||||||||||||||||||||||||||||||||||||| ||||       |||||||||| |||||||||||||||||  ||||    
T  26965590 accctc---------tccaacttttctctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttagtaaaagcgtta 26965500  T
Q  340 tatgtaataattattttatttcatttcttaatatgcgtgtcaaa 383  Q
    |||  ||| ||||||| |||| |||||||||| || ||||||||    
T  26965499 tatccaatgattatttcattttatttcttaatctgtgtgtcaaa 26965456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 140 - 338
Target Start/End: Original strand, 44854278 - 44854475
Alignment:
Q  140 ttttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaacttt 239  Q
    |||||||||||| || |||||| | ||||||| ||| |||||| ||||||||  |||||||||| || |||||||| |||||       ||||||| |||    
T  44854278 ttttaaaatgagtgttattttaactaaaaagagaaa-ttgtttcaaaatgaacgtcactttacattttcaatacaattttaacttttt-cttccaatttt 44854375  T
Q  240 accctcaataaatactccaacttttctctca-cacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgtt 338  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||       |||||||||| ||||||||||||||||| ||||    
T  44854376 accctcaataaatactccaacttttctctcagtacaattttcaatgcaactttaagtttgtatttttcttataaagtaagggcagtttagtaaaagtgtt 44854475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 177 - 371
Target Start/End: Original strand, 4391903 - 4392088
Alignment:
Q  177 ttgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaat 276  Q
    |||||||||||||||| |||||||||| ||  | ||||| |||||       || |||||||||||||||||||||||||||||||||||||| ||||||    
T  4391903 ttgttttaaaatgaatatcactttacatttttagtacaattttaatttttttctcccaactttaccctcaataaatactccaacttttctctcgcacaat 4392002  T
Q  277 tttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaat 371  Q
    ||||||||||||||||||||||       |||         |||||||||||||||| |||||| | |||||||||||| |||||||||||||||    
T  4392003 tttcaatgcaactttaagtttgtctttttctt---------gggcagtttagtaaaagtgttatgtctaataattatttcatttcatttcttaat 4392088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 140 - 298
Target Start/End: Original strand, 27027698 - 27027853
Alignment:
Q  140 ttttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaacttt 239  Q
    ||||||||| || ||| |||||||||||||   |||||||||| ||||| ||| ||| |||||| ||||||||||| |||||       |||| ||||||    
T  27027698 ttttaaaataagtgtcgttttagcaaaaaa---aaaattgtttcaaaattaatgtcaatttacatttccaatacaaatttaatttttttcttcaaacttt 27027794  T
Q  240 accctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttg 298  Q
    | ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27027795 atccttaataaatactccaacttttctctcacacaattttcaatgcaactttaaatttg 27027853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 140 - 396
Target Start/End: Original strand, 19552505 - 19552750
Alignment:
Q  140 ttttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaacttt 239  Q
    ||||||||| || ||||||||||| ||||| |   | |||||||||||||||| |||||||||| || ||||||||||||||       |||||||||||    
T  19552505 ttttaaaataagtgtcattttagctaaaaaca---atttgttttaaaatgaatgtcactttacattttcaatacaactttaaattttttcttccaacttt 19552601  T
Q  240 accctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagt-aaaaatgtt 338  Q
    ||||||         || ||||||||||||||| |||||||||||||||||||| ||||       |||||||||| ||| ||||||||| ||||| |||    
T  19552602 accctc---------tctaacttttctctcacagaattttcaatgcaactttaattttgtatttttcttataaagtaaggacagtttagtaaaaaacgtt 19552692  T
Q  339 atatgtaataattattttatttcatttcttaatatgcgtgtcaaactcttaaacgaca 396  Q
    ||||  ||| ||||||| ||||||||||||||| || ||| |||| ||| ||||||||    
T  19552693 atatccaatgattatttcatttcatttcttaatttgtgtgccaaagtctaaaacgaca 19552750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 173 - 371
Target Start/End: Original strand, 22730920 - 22731124
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||||||||||||| ||||| ||| |||||| |||||||||||||||||       |||||||||||||| ||||||||||||| |||||||||||||||    
T  22730920 aaaattgttttaaactgaatgtcaatttacatttccaatacaactttaatttttttcttccaactttaccttcaataaatactcaaacttttctctcaca 22731019  T
Q  273 caattttc-------aatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcattt 365  Q
    ||| ||||       |||| |||||||||||||       |||||||| ||| |||||||||||||||||||||| | |||| ||||||| |||  ||||    
T  22731020 caaatttcaatgtaaaatgtaactttaagtttgtctttttcttataaattga-ggcagtttagtaaaaatgttatgtttaatgattatttcattatattt 22731118  T
Q  366 cttaat 371  Q
    ||||||    
T  22731119 cttaat 22731124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 173 - 371
Target Start/End: Complemental strand, 27483342 - 27483153
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||| ||||| ||||||||| |||||||||| |||||||||||||||||       |||||||||||||||||         ||||||||||||||||||    
T  27483342 aaaaatgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactttaccctc---------tccaacttttctctcaca 27483252  T
Q  273 caattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaat 371  Q
     |||||||||||||||||||||||||       |||||||||| |||| | |||||||||| |||||| | |||| ||||||| |||||||| ||||||    
T  27483251 taattttcaatgcaactttaagtttgtctttttcttataaagtaagggaaatttagtaaaagtgttatgtctaatgattatttcatttcattccttaat 27483153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 173 - 298
Target Start/End: Complemental strand, 2988767 - 2988641
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttc--tctca 270  Q
    |||||||||| ||||||||| |||||||||| ||||||||||| |||||       |||||||||||||||||||||||||||| ||||||||  ||||     
T  2988767 aaaattgtttcaaaatgaatgtcactttacatttccaatacaa-tttaatttttttcttccaactttaccctcaataaatactcaaacttttctctctcg 2988669  T
Q  271 cacaattttcaatgcaactttaagtttg 298  Q
    ||||||||||||||||||||||||||||    
T  2988668 cacaattttcaatgcaactttaagtttg 2988641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 177 - 374
Target Start/End: Complemental strand, 36771721 - 36771533
Alignment:
Q  177 ttgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaat 276  Q
    |||||||||||||||| |||||||||| || ||||||||||||||       ||| |||||||| ||||         ||||||||||||||||||||||    
T  36771721 ttgttttaaaatgaatgtcactttacatttacaatacaactttaattttttactttcaactttatcctc---------tccaacttttctctcacacaat 36771631  T
Q  277 tttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaatatg 374  Q
    ||||||||||||||||||||||       |||||||| | || |||||||||||||||| |||| | |||||||||||| |||  |||||||||||||    
T  36771630 tttcaatgcaactttaagtttgtctttttcttataaaataagagcagtttagtaaaaatattatgtctaataattatttcattatatttcttaatatg 36771533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 176 - 298
Target Start/End: Original strand, 3000750 - 3000873
Alignment:
Q  176 attgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnn-cttccaactttaccctcaataaatactccaacttttctctcacaca 274  Q
    ||||||||||||||||| | |||||||| || ||||||||||||||        || |||||| ||||||||||||||||||||||||||||||||||||    
T  3000750 attgttttaaaatgaatgttactttacattttcaatacaactttaattttttttctcccaactctaccctcaataaatactccaacttttctctcacaca 3000849  T
Q  275 attttcaatgcaactttaagtttg 298  Q
    ||||||||||||||||||| ||||    
T  3000850 attttcaatgcaactttaaatttg 3000873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 173 - 374
Target Start/End: Original strand, 25061699 - 25061889
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    ||||||||||||||||||||  ||||||||| |||||||||||||||||       || |||||||||| |||         |||||||||||||||| |    
T  25061699 aaaattgttttaaaatgaatgccactttacatttccaatacaactttaatttttttctcccaactttactctc---------tccaacttttctctcata 25061789  T
Q  273 caattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaata 372  Q
    ||||||||||||||||||||||||||       |||||||||| |||| |||||||||||| |||||| | |||| ||||||| |||||||| |||||||    
T  25061790 caattttcaatgcaactttaagtttg--tttttcttataaagtaagggtagtttagtaaaagtgttatgtctaatgattatttcatttcattccttaata 25061887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 173 - 356
Target Start/End: Original strand, 41287071 - 41287256
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnn--cttccaactttaccctcaataaatactccaacttttctctca 270  Q
    |||||| |||||||||| || |||||||||| |||||||||||||||||         ||||||||||| |||||||||||||||| |||  || |||||    
T  41287071 aaaattattttaaaatggatgtcactttacatttccaatacaactttaatttttttttcttccaacttttccctcaataaatactcaaaccattttctca 41287170  T
Q  271 cacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattatttt 356  Q
    ||||||||||||||||||||||||||||       | |||||| | || |||||||||||||| |||||| | |||| ||||||||    
T  41287171 cacaattttcaatgcaactttaagtttgagtttttcatataaaataagtgcagtttagtaaaagtgttatgtctaatgattatttt 41287256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 173 - 298
Target Start/End: Complemental strand, 25722619 - 25722492
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctc--a 270  Q
    |||||| ||| ||||||||| |||||||||| || ||||||||||||||       ||||  |||||||||| ||||||||||||||||||||||||  |    
T  25722619 aaaattatttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttcatactttaccctaaataaatactccaacttttctctctca 25722520  T
Q  271 cacaattttcaatgcaactttaagtttg 298  Q
    ||||||||||||||||||||||||||||    
T  25722519 cacaattttcaatgcaactttaagtttg 25722492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 177 - 298
Target Start/End: Complemental strand, 32304059 - 32303936
Alignment:
Q  177 ttgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctc--acaca 274  Q
    ||||||| |||||||| |||||||||| || ||||||||||||||       |||||||||||||||||||||||||||| ||||||||||||  |||||    
T  32304059 ttgttttgaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatactcaaacttttctctcttacaca 32303960  T
Q  275 attttcaatgcaactttaagtttg 298  Q
    ||||||||| || |||||||||||    
T  32303959 attttcaatacagctttaagtttg 32303936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 173 - 298
Target Start/End: Original strand, 43169329 - 43169456
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttt--tctctca 270  Q
    |||||||||| ||||||||| ||| |||||| |||||||||||||||||       |||| ||||||||| ||||||||||||| ||||||  |||||||    
T  43169329 aaaattgtttcaaaatgaatgtcattttacatttccaatacaactttaatttttttcttctaactttaccttcaataaatactcaaacttttatctctca 43169428  T
Q  271 cacaattttcaatgcaactttaagtttg 298  Q
    ||||||||||||| ||||||||||||||    
T  43169429 cacaattttcaatacaactttaagtttg 43169456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 229 - 399
Target Start/End: Complemental strand, 43600293 - 43600122
Alignment:
Q  229 cttccaactttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnnctt-ataaagtga-gggcagttt 326  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||| ||||  |||||||| ||||        || ||||||| | ||| |||||    
T  43600293 cttccaactttaccctcaataaatactcta-cttttctctcacacaatttccaatataactttaaatttgtcattttttttataaagtaaagggaagttt 43600195  T
Q  327 agtaaaaatgttatatgtaataattattttatttcatttcttaatatgcgtgtcaaactcttaaacgacactt 399  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||| |||| |||   || |||||||||||    
T  43600194 agtaaaaatgttatatctaataattattttatttcatttcttattatacgtgccaacacctaaaacgacactt 43600122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 144 - 297
Target Start/End: Original strand, 44645309 - 44645459
Alignment:
Q  144 aaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccc 243  Q
    |||||||| ||| |||||||||||||     |||| ||| ||||||||| || ||||||| |||| || |||||||||       |||||||||||||||    
T  44645309 aaaatgagtgtcgttttagcaaaaaa-----aattatttcaaaatgaatgtcgctttacatttcccatgcaactttaatttttttcttccaactttaccc 44645403  T
Q  244 tcaataaatactccaacttttctctc--acacaattttcaatgcaactttaagttt 297  Q
    ||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||    
T  44645404 tcaataaatactccaacttttctctcttacataattttcaatgcaactttaagttt 44645459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 135 - 355
Target Start/End: Original strand, 43580436 - 43580656
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnn-cttcc 233  Q
    |||| ||| ||||||||||||  |||||| ||||| ||    |||||| ||||| ||| |||||||||| || ||||||||||||||        |||||    
T  43580436 ctccgtttcaaaatgagcgtcgctttagccaaaaaaat----ttgtttcaaaataaatgtcactttacattttcaatacaactttaattttttttcttcc 43580531  T
Q  234 aactttaccctcaataaatactccaac-ttttctctcacacaattttcaatgcaactttaagtttgnnnnnnnc--ttataaagtgagggcagtttagta 330  Q
    ||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||| ||||       |   ||||||   ||||||||||||||    
T  43580532 aactttacccttaataaatactccaactttttttctcacacaattttcaatgcaactttaaatttgtctttttcatatataaaacaagggcagtttagta 43580631  T
Q  331 aaaatgttatatgtaataattattt 355  Q
    ||||||||||||||||| |||||||    
T  43580632 aaaatgttatatgtaatgattattt 43580656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 135 - 340
Target Start/End: Complemental strand, 43688078 - 43687872
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnn---ctt 231  Q
    |||| ||| |||||||| ||| |||||||||||||    ||||||||  ||||| ||| |||||||||| |||||||||||||||||          |||    
T  43688078 ctccgtttcaaaatgagtgtcgttttagcaaaaaa----aaattgttccaaaataaatgtcactttacatttccaatacaactttaattttttttttctt 43687983  T
Q  232 ccaactttaccctcaataaatactccaacttttc--tctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagt 329  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||| ||||       |||||||||| |||  | ||||||    
T  43687982 ccaactttaccctcaataaatactccaacttttctctctcacacaattttcaatgaaactttaaatttgtcttgttcttataaagtaaggttattttagt 43687883  T
Q  330 aaaaatgttat 340  Q
    |||| ||||||    
T  43687882 aaaattgttat 43687872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 173 - 298
Target Start/End: Complemental strand, 15514884 - 15514758
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnn-cttccaactttaccctcaataaatactccaacttttctctcac 271  Q
    ||||||||||| |||| ||| |||||||||| |||||||||||||||||        || ||||||||||| |||||| ||||||||||||||||||| |    
T  15514884 aaaattgttttcaaataaatgtcactttacatttccaatacaactttaattttttttctcccaactttaccttcaatagatactccaacttttctctcgc 15514785  T
Q  272 acaattttcaatgcaactttaagtttg 298  Q
    | |||||||||||||||||||||||||    
T  15514784 ataattttcaatgcaactttaagtttg 15514758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 135 - 340
Target Start/End: Original strand, 54261376 - 54261579
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttcca 234  Q
    |||| ||| |||||||| ||| ||||||| |||||    ||||||||| ||||||||  || ||||||| || |||| |||||||||       ||||||    
T  54261376 ctccgtttcaaaatgagtgtcgttttagccaaaaa----aaattgtttcaaaatgaacgtcgctttacattttcaatgcaactttaatttttttcttcca 54261471  T
Q  235 actttaccctcaataaatactccaacttt--tctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaa 332  Q
    |||||||||||||||||||||| ||||||  |||||||||||||||||||| ||||||||||||||       |||||||||| |||  | |||||||||    
T  54261472 actttaccctcaataaatactctaacttttctctctcacacaattttcaatacaactttaagtttgtatttttcttataaagtaaggttattttagtaaa 54261571  T
Q  333 aatgttat 340  Q
    | ||||||    
T  54261572 attgttat 54261579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 258 - 383
Target Start/End: Original strand, 790152 - 790277
Alignment:
Q  258 aacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattatttta 357  Q
    ||||||||||||||||||||| |||||||||||||| ||||       |||||||||| |||||||||||||||||  |||||||  ||| ||||||| |    
T  790152 aacttttctctcacacaatttccaatgcaactttaattttgactttttcttataaagtaagggcagtttagtaaaagcgttatattcaatgattatttca 790251  T
Q  358 tttcatttcttaatatgcgtgtcaaa 383  Q
    || |||||||||||||| ||||||||    
T  790252 ttacatttcttaatatgtgtgtcaaa 790277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 173 - 298
Target Start/End: Complemental strand, 20512655 - 20512527
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnn-cttccaactttaccctcaataaatactccaacttttc--tctc 269  Q
    |||||||||| ||||||||| || ||||||| || |||| |||||||||        |||||||||||||| ||||||||||||||||||||||  ||||    
T  20512655 aaaattgtttcaaaatgaatgtcgctttacattttcaatgcaactttaaatttttttcttccaactttaccttcaataaatactccaacttttctctctc 20512556  T
Q  270 acacaattttcaatgcaactttaagtttg 298  Q
    |||||||||||||| ||||||||||||||    
T  20512555 acacaattttcaatacaactttaagtttg 20512527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 198 - 298
Target Start/End: Complemental strand, 35099499 - 35099399
Alignment:
Q  198 tttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagttt 297  Q
    |||||| |||||||||||||||||       || ||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||| |||||||||    
T  35099499 tttacatttccaatacaactttaatttttttctcccaactttacccttaataaatactcaaacttttctctcgcacaattttcaatgcaattttaagttt 35099400  T
Q  298 g 298  Q
    |    
T  35099399 g 35099399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 255 - 359
Target Start/End: Original strand, 35239438 - 35239542
Alignment:
Q  255 tccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattatt 354  Q
    ||||||||||||||||||||||||||| ||||||||||||||||       |||||||||| ||| ||||||||||||||||||||   |||| ||||||    
T  35239438 tccaacttttctctcacacaattttcactgcaactttaagtttgtctttttcttataaagtaaggacagtttagtaaaaatgttatgcctaatgattatt 35239537  T
Q  355 ttatt 359  Q
    |||||    
T  35239538 ttatt 35239542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 135 - 371
Target Start/End: Complemental strand, 44648593 - 44648370
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttcca 234  Q
    |||| ||| |||||||| ||| |||||||||||||    ||||||||||||||||||| |||||||||| ||||||||||||||| |        |||||    
T  44648593 ctccgtttcaaaatgagtgtcgttttagcaaaaaa----aaattgttttaaaatgaatgtcactttacatttccaatacaacttt-attttttttttcca 44648499  T
Q  235 actttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttg-nnnnnnncttataaagtgagggcagtttagtaaaa 333  Q
    ||||||| ||         ||||||||||| |||||||||||||||||| ||||||||||||||        || ||||||| | |||||||||||||||    
T  44648498 actttactct---------ctccaacttttttctcacacaattttcaattcaactttaagtttgtcttttttctcataaagtaaaggcagtttagtaaaa 44648408  T
Q  334 atgttatatgtaataattattttatttcatttcttaat 371  Q
     |||||| | |||| ||||||| |||||||| ||||||    
T  44648407 gtgttatgtctaatgattatttcatttcattccttaat 44648370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 134 - 298
Target Start/End: Original strand, 49470749 - 49470911
Alignment:
Q  134 tctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttcc 233  Q
    ||||| ||||||||| || |||  ||||||||||||    ||||||||| ||||||||| ||  |||||| || ||||||||||||||       | |||    
T  49470749 tctccgttttaaaataagtgtcgctttagcaaaaaa----aaattgtttcaaaatgaatgtcgttttacattttcaatacaactttaatttttttcatcc 49470844  T
Q  234 aactttaccctcaataaatactccaacttttctctc--acacaattttcaatgcaactttaagtttg 298  Q
    || |||| || |||||||||||||||||||||||||  ||||||||||||||||| |||||||||||    
T  49470845 aaatttagccacaataaatactccaacttttctctcttacacaattttcaatgcagctttaagtttg 49470911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 255 - 408
Target Start/End: Original strand, 53716082 - 53716233
Alignment:
Q  255 tccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattatt 354  Q
    |||||||||||||||||||| ||||||||||||||||||  |||       |||||||||| || ||||||||||||||  |||||||  ||| ||||||    
T  53716082 tccaacttttctctcacacagttttcaatgcaactttaa--ttgtctttttcttataaagtaagagcagtttagtaaaagcgttatatccaatgattatt 53716179  T
Q  355 ttatttcatttcttaatatgcgtgtcaaactcttaaacgacacttattgtgaaa 408  Q
    | ||||||||||||||| |  |||||||| ||| || ||||||| ||| |||||    
T  53716180 tcatttcatttcttaatttatgtgtcaaagtctaaagcgacactcattttgaaa 53716233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 173 - 355
Target Start/End: Complemental strand, 2568161 - 2567988
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||||||||||||||||||| | |||||||| || ||||||||||||||       ||||||||||||||||          || || ||||||||||||    
T  2568161 aaaattgttttaaaatgaatgttactttacattttcaatacaactttaatttttttcttccaactttaccctt---------tctaatttttctctcaca 2568071  T
Q  273 caattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattt 355  Q
    ||||||||||||||||||||||||||       |||||||||| ||| || ||| |||||| |||||||| |||| |||||||    
T  2568070 caattttcaatgcaactttaagtttgtctttttcttataaagtaaggacatttttgtaaaagtgttatatctaatgattattt 2567988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 231 - 424
Target Start/End: Original strand, 5244638 - 5244830
Alignment:
Q  231 tccaactttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagta 330  Q
    |||||||||||||||||||||||||| || ||||||||||||  ||||||||||||||||||||||||       ||||| |||| | |  | |||| ||    
T  5244638 tccaactttaccctcaataaatactctaatttttctctcacattattttcaatgcaactttaagtttgtttttttcttat-aagtaaagagactttaata 5244736  T
Q  331 aaaatgttatatgtaataattattttatttcatttcttaatatgcgtgtcaaactcttaaacgacacttattgtgaaatagagggagcataaaa 424  Q
    ||| |||||| | |||| ||||||| |||  ||||||||||||| ||| ||||  ||||||| | | | |||||||||  ||||||| ||||||    
T  5244737 aaagtgttatgtctaatgattatttcattcaatttcttaatatgtgtgccaaatccttaaacaaaattcattgtgaaacggagggagtataaaa 5244830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 140 - 371
Target Start/End: Original strand, 34059841 - 34060058
Alignment:
Q  140 ttttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaacttt 239  Q
    |||||||||||| |||| |||||  |||||   ||| |||||||||||||||| ||| |||||| || ||||||||||||||       ||| |||||||    
T  34059841 ttttaaaatgagtgtcactttagtcaaaaa---aaatttgttttaaaatgaatgtcattttacattttcaatacaactttaatttttttctttcaacttt 34059937  T
Q  240 accctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgtta 339  Q
    ||||||         ||||||||||||||| |||||||||||||||||||||||  |||       |||||||||| |||| |||||||||||||  |||    
T  34059938 accctc---------tccaacttttctctcgcacaattttcaatgcaactttaa--ttgtctttttcttataaagtaagggtagtttagtaaaaacttta 34060026  T
Q  340 tatgtaataattattttatttcatttcttaat 371  Q
    |||  ||| ||||||| ||| |||||||||||    
T  34060027 tatccaattattatttcattccatttcttaat 34060058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 229 - 298
Target Start/End: Original strand, 36541542 - 36541613
Alignment:
Q  229 cttccaactttaccctcaataaatactccaacttt--tctctcacacaattttcaatgcaactttaagtttg 298  Q
    ||||||||||||||||||||||||| |||||||||  ||||||||||||||||| |||||||||||||||||    
T  36541542 cttccaactttaccctcaataaatattccaacttttctctctcacacaattttcgatgcaactttaagtttg 36541613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 173 - 298
Target Start/End: Original strand, 51381716 - 51381846
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnn-cttccaactttaccctcaataaatactccaacttttctc---- 267  Q
    |||||||||| ||||| ||| |||||||||| || ||||||||||||||        |||| |||||||||||| ||||||||||||| |||||||        
T  51381716 aaaattgtttcaaaataaatgtcactttacatttacaatacaactttaattttttttcttctaactttaccctcgataaatactccaatttttctctctc 51381815  T
Q  268 tcacacaattttcaatgcaactttaagtttg 298  Q
    |||||||||||||||||||||||||||||||    
T  51381816 tcacacaattttcaatgcaactttaagtttg 51381846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 180 - 364
Target Start/End: Complemental strand, 1341071 - 1340896
Alignment:
Q  180 ttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaatttt 279  Q
    ||||||||||||| |||||||||| || ||||||||||||||       |||||||| ||||||||         |||||||||||||||||||||||||    
T  1341071 ttttaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaacgttaccctc---------tccaacttttctctcacacaatttt 1340981  T
Q  280 caatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatt 364  Q
    |||||||||||||||||||       |||||||||| | | || ||||| |||| |||||| | |||| ||||||| ||| ||||    
T  1340980 caatgcaactttaagtttgtctttttcttataaagtaaagacactttagaaaaagtgttatgtctaattattatttcattccatt 1340896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 174 - 298
Target Start/End: Original strand, 50420255 - 50420378
Alignment:
Q  174 aaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacac 273  Q
    ||||||||| ||||| ||| ||| |||||| ||  |||||||||||||       |||||||||||||  ||||||||||||| |||||||||||| | |    
T  50420255 aaattgtttaaaaataaatgtcattttacatttttaatacaactttaatttttt-cttccaactttactttcaataaatactctaacttttctctcgcgc 50420353  T
Q  274 aattttcaatgcaactttaagtttg 298  Q
    |||||||||||||||||||||||||    
T  50420354 aattttcaatgcaactttaagtttg 50420378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 136 - 276
Target Start/End: Complemental strand, 42857252 - 42857114
Alignment:
Q  136 tccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaa 235  Q
    |||||||||||||||  |||| |||||||||||| | |||  |||||||||| |||| |||||||||| |||| ||||||| ||||       |||| ||    
T  42857252 tccattttaaaatgaatgtcactttagcaaaaaaaaaaaa--tgttttaaaaggaatgtcactttacatttcccatacaacattaatttttttcttctaa 42857155  T
Q  236 ctttaccctcaataaatactccaacttttctctcacacaat 276  Q
    ||||||| || |||||||||||||||||| || ||||||||    
T  42857154 ctttaccttcgataaatactccaacttttttcgcacacaat 42857114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 233 - 298
Target Start/End: Original strand, 27039382 - 27039447
Alignment:
Q  233 caactttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttg 298  Q
    ||||||||  || |||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  27039382 caactttattcttaataaatactccaactttcctctcacacaattttcaatgcaactttaaatttg 27039447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 257 - 371
Target Start/End: Complemental strand, 31291047 - 31290934
Alignment:
Q  257 caacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattatttt 356  Q
    ||||||||||||||||||||||||| |||||||||||||||        || ||||| | | ||||||||||||||| |||||| | ||||||||||||     
T  31291047 caacttttctctcacacaattttcattgcaactttaagttt-tctttttctaataaaataaaggcagtttagtaaaagtgttatgtctaataattatttc 31290949  T
Q  357 atttcatttcttaat 371  Q
    |||||||| ||||||    
T  31290948 atttcattccttaat 31290934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 173 - 290
Target Start/End: Complemental strand, 36310408 - 36310290
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaa-tactccaacttttctctcac 271  Q
    |||||||||| ||||| ||| ||| |||||| ||||||||||||||||        || ||||||||||| |||||||| ||||| || ||||||||| |    
T  36310408 aaaattgtttcaaaataaatgtcattttacatttccaatacaactttattttttttctcccaactttaccttcaataaaatactcaaatttttctctcgc 36310309  T
Q  272 acaattttcaatgcaactt 290  Q
    |||||||||||||||||||    
T  36310308 acaattttcaatgcaactt 36310290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 36228993 - 36229044
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  36228993 ggtcttagatgaagtggtaatccattgaaaataaactcacacacaactgtga 36229044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 261 - 360
Target Start/End: Complemental strand, 2662562 - 2662463
Alignment:
Q  261 ttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttattt 360  Q
    ||||||||||||||||||||||||||||||||| ||||       |||||||| | |||||| |||||||||| |||||| | |||| ||||||| ||||    
T  2662562 ttttctctcacacaattttcaatgcaactttaaatttgtctttttcttataaaataagggcaatttagtaaaagtgttatgtctaatgattatttcattt 2662463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 229 - 371
Target Start/End: Original strand, 22414807 - 22414946
Alignment:
Q  229 cttccaactttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttag 328  Q
    |||||||||||||| ||||||||||||| | |||  |||| ||||||||||||||||||||||||||||        |||||||| |   || ||||||     
T  22414807 cttccaactttaccttcaataaatactcaacctt--ctcttacacaattttcaatgcaactttaagttt-ctcttttcttataaactataggtagtttaa 22414903  T
Q  329 taaaaatgttatatgtaataattattttatttcatttcttaat 371  Q
    ||||| | |||| | |||||||||||| |||||||||||||||    
T  22414904 taaaagtattatgtctaataattatttcatttcatttcttaat 22414946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 255 - 371
Target Start/End: Complemental strand, 38165741 - 38165621
Alignment:
Q  255 tccaacttttctctcacacaattttca----atgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataat 350  Q
    |||||||||||||||||||||||| ||    |||||||||||||||||       |||||||||| ||| ||||||||||||| |||||| | |||| ||    
T  38165741 tccaacttttctctcacacaatttccatccaatgcaactttaagtttgtctttttcttataaagtaaggacagtttagtaaaagtgttatgtttaatgat 38165642  T
Q  351 tattttatttcatttcttaat 371  Q
    ||||| ||| |||| ||||||    
T  38165641 tatttcattacattccttaat 38165621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 254 - 298
Target Start/End: Complemental strand, 43599907 - 43599863
Alignment:
Q  254 ctccaacttttctctcacacaattttcaatgcaactttaagtttg 298  Q
    |||||||||||||||||||||||||| ||||||||||||||||||    
T  43599907 ctccaacttttctctcacacaatttttaatgcaactttaagtttg 43599863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 3112994 - 3113045
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  3112994 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 3113045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 7824453 - 7824504
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  7824453 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 7824504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 29689481 - 29689532
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  29689481 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 29689532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 43247649 - 43247700
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  43247649 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 43247700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Complemental strand, 54158395 - 54158344
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  54158395 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 54158344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 256 - 298
Target Start/End: Original strand, 16240654 - 16240696
Alignment:
Q  256 ccaacttttctctcacacaattttcaatgcaactttaagtttg 298  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  16240654 ccaacttttctctcgcacaattttcaatgcaactttaagtttg 16240696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 600 - 649
Target Start/End: Original strand, 51665924 - 51665973
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgt 649  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||    
T  51665924 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgt 51665973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 53715996 - 53716072
Alignment:
Q  140 ttttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaa 221  Q
    |||||||||||| ||||||||| |||||||     || ||||||||||||||| | |||||||| |||||||||||||||||    
T  53715996 ttttaaaatgagtgtcattttaacaaaaaa-----aaatgttttaaaatgaatgttactttacatttccaatacaactttaa 53716072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 320 - 408
Target Start/End: Complemental strand, 6084838 - 6084750
Alignment:
Q  320 gcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaatatgcgtgtcaaactcttaaacgacacttattgtgaaa 408  Q
    |||||||| ||||||||| || | |||| ||||||| ||||||||| ||||| || |||| |||  ||||||||||||| |||||||||    
T  6084838 gcagtttaataaaaatgtaatgtctaatgattatttcatttcattttttaatttgtgtgttaaaaccttaaacgacactcattgtgaaa 6084750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 229 - 294
Target Start/End: Original strand, 53560715 - 53560782
Alignment:
Q  229 cttccaactttaccctcaataaatactccaacttttctctcacaca--attttcaatgcaactttaag 294  Q
    |||||||||||| |||| ||||| |||| |||||||||||| ||||  ||||||||||||||||||||    
T  53560715 cttccaactttatcctcgataaaaactcaaacttttctctctcacataattttcaatgcaactttaag 53560782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 604 - 651
Target Start/End: Original strand, 9349679 - 9349726
Alignment:
Q  604 ttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  9349679 ttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 9349726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 234 - 298
Target Start/End: Complemental strand, 42007159 - 42007093
Alignment:
Q  234 aactttaccctcaataaatactccaacttttctct--cacacaattttcaatgcaactttaagtttg 298  Q
    ||||||| ||| ||||||||||| ||||||| |||  || |||||||||||||||||||||||||||    
T  42007159 aactttatccttaataaatactcaaacttttttctttcatacaattttcaatgcaactttaagtttg 42007093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 42392804 - 42392855
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||||||| ||||| ||||||||||||||| |||||    
T  42392804 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaattgtga 42392855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 600 - 651
Target Start/End: Complemental strand, 52500967 - 52500916
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| | | |||||||||||||||||||||||||||    
T  52500967 ggtcttagatgaagtggtaatctactgaaaataaactcacacacaactgtga 52500916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 54151680 - 54151731
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||| ||||||||||||    
T  54151680 ggtcttagatgaagtggtaatccactgaaaataaactcatacacaactgtga 54151731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 651
Target Start/End: Complemental strand, 4601553 - 4601503
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| |||| |||||| ||| |||||||||||||||||||||||||||    
T  4601553 gtcttagatgaactggtaatccactgaaaataaactcacacacaactgtga 4601503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 609 - 651
Target Start/End: Original strand, 32001432 - 32001474
Alignment:
Q  609 tgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||||||| || |||||||||||||||||||||||||||    
T  32001432 tgaagtggtaaatcactgaaaataaactcacacacaactgtga 32001474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 293
Target Start/End: Original strand, 42791380 - 42791418
Alignment:
Q  255 tccaacttttctctcacacaattttcaatgcaactttaa 293  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  42791380 tccaacttttctctcacataattttcaatgcaactttaa 42791418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 609 - 651
Target Start/End: Original strand, 55018042 - 55018084
Alignment:
Q  609 tgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||||||| ||| |||||||||||||||||||||||||||    
T  55018042 tgaagtggtaatccactgaaaataaactcacacacaactgtga 55018084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 647
Target Start/End: Original strand, 55320400 - 55320446
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaact 647  Q
    ||||||| ||||||||||| ||| |||||||||||||||||||||||    
T  55320400 gtcttagatgaagtggtaatccactgaaaataaactcacacacaact 55320446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 257 - 294
Target Start/End: Complemental strand, 4476434 - 4476397
Alignment:
Q  257 caacttttctctcacacaattttcaatgcaactttaag 294  Q
    |||||||| |||||||||||||||||||||||||||||    
T  4476434 caacttttttctcacacaattttcaatgcaactttaag 4476397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 33194220 - 33194160
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcacttt 200  Q
    ||||||||||||||||| ||| |||||||||||     |||||||||||||||||||| |||||||    
T  33194220 ctccattttaaaatgagtgtcgttttagcaaaa-----aaaattgttttaaaatgaatgtcacttt 33194160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 40048952 - 40049067
Alignment:
Q  254 ctccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattat 353  Q
    ||||||||||||||||| |  ||||||||||||||||||| ||||       |||||||||| | |||| |||| ||||| |||||| | |||| |||||    
T  40048952 ctccaacttttctctcata--attttcaatgcaactttaaatttgtctttttcttataaagtaaaggcaatttaataaaagtgttatgtctaatgattat 40049049  T
Q  354 tttatttcatttcttaat 371  Q
    || ||| |||| ||||||    
T  40049050 ttcattccattccttaat 40049067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 257 - 294
Target Start/End: Original strand, 42740302 - 42740339
Alignment:
Q  257 caacttttctctcacacaattttcaatgcaactttaag 294  Q
    |||||||| |||||||||||||||||||||||||||||    
T  42740302 caacttttttctcacacaattttcaatgcaactttaag 42740339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 600 - 651
Target Start/End: Complemental strand, 28844634 - 28844582
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaa-taaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||| |||||||||||||||||||||    
T  28844634 ggtcttagatgaagtggtaatccactgaaaaataaactcacacacaactgtga 28844582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 45095548 - 45095596
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaa 221  Q
    |||||| ||||||||||||| |||||||||| || ||||||||||||||    
T  45095548 aaaattattttaaaatgaatgtcactttacattttcaatacaactttaa 45095596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 309 - 355
Target Start/End: Complemental strand, 9167711 - 9167665
Alignment:
Q  309 ataaagtgagggcagtttagtaaaaatgttatatgtaataattattt 355  Q
    ||||||| |||||||||||||||||||||||| || ||| |||||||    
T  9167711 ataaagtaagggcagtttagtaaaaatgttatgtgaaatgattattt 9167665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 205 - 260
Target Start/End: Complemental strand, 52222871 - 52222816
Alignment:
Q  205 ttccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaac 260  Q
    |||||||||||||||||       |||||||||||||||||| |||||||||||||    
T  52222871 ttccaatacaactttaatttttttcttccaactttaccctcagtaaatactccaac 52222816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 3152995 - 3152935
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcacttt 200  Q
    |||| |||||||||||| |||||||||||||||     |||||||||| ||||||||| |||||||    
T  3152995 ctccgttttaaaatgagtgtcattttagcaaaa-----aaaattgtttcaaaatgaatgtcacttt 3152935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 651
Target Start/End: Original strand, 40756728 - 40756777
Alignment:
Q  602 tcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||| ||||||||||||| | ||||| ||||||||||| |||||||||    
T  40756728 tcttagatgaagtggtaaactactgaaattaaactcacacgcaactgtga 40756777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 601 - 642
Target Start/End: Complemental strand, 47770451 - 47770410
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacaca 642  Q
    ||||||| ||||||| ||||||||||||| ||||||||||||    
T  47770451 gtcttagatgaagtgataaaccattgaaattaaactcacaca 47770410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 200
Target Start/End: Complemental strand, 50038362 - 50038300
Alignment:
Q  134 tctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcacttt 200  Q
    ||||| |||||||||||| |||  ||||||||||||    ||||||||||||||||||| |||||||    
T  50038362 tctccgttttaaaatgagtgtcgctttagcaaaaaa----aaattgttttaaaatgaatgtcacttt 50038300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 790095 - 790139
Alignment:
Q  177 ttgttttaaaatgaatttcactttacaattccaatacaactttaa 221  Q
    |||||| ||||| ||| |||||||||| |||||||||||||||||    
T  790095 ttgtttcaaaattaatgtcactttacatttccaatacaactttaa 790139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 603 - 651
Target Start/End: Complemental strand, 1778977 - 1778929
Alignment:
Q  603 cttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||| ||||||||||| |||||||||||||| ||| |||||| |||||    
T  1778977 cttagatgaagtggtaatccattgaaaataaattcaaacacaattgtga 1778929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 13485959 - 13485915
Alignment:
Q  177 ttgttttaaaatgaatttcactttacaattccaatacaactttaa 221  Q
    |||||| ||||||||| ||| |||||| |||||||||||||||||    
T  13485959 ttgtttcaaaatgaatgtcaatttacatttccaatacaactttaa 13485915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 31291118 - 31291074
Alignment:
Q  177 ttgttttaaaatgaatttcactttacaattccaatacaactttaa 221  Q
    |||| ||||||||||| |||||||||| ||| |||||||||||||    
T  31291118 ttgtcttaaaatgaatatcactttacatttctaatacaactttaa 31291074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 6e-48; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 173 - 371
Target Start/End: Complemental strand, 28751567 - 28751368
Alignment:
Q  173 aaaattgttttaaaatgaatt-tcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcac 271  Q
    |||||| ||| |||||||| | |||||||||| || ||||||||||||||       |||||||||||||||||||||||||||| |||||||||||| |    
T  28751567 aaaattatttcaaaatgaaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatactcaaacttttctctcgc 28751468  T
Q  272 acaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaat 371  Q
    ||||||||||||| |||||||||||||       |||||||||| |||||||||||||||||||||||| | |||| |||||||||||||||| ||||||    
T  28751467 acaattttcaatgtaactttaagtttgtccttttcttataaagtaagggcagtttagtaaaaatgttatgtctaatgattattttatttcattccttaat 28751368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 140 - 382
Target Start/End: Original strand, 1428832 - 1429070
Alignment:
Q  140 ttttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaacttt 239  Q
    |||| ||||||| |||| ||||||||||||     || ||||||||||||||| |||||||||| ||| |||||||||| ||       ||| |||||||    
T  1428832 ttttgaaatgagtgtcactttagcaaaaaa-----aaatgttttaaaatgaatgtcactttacatttctaatacaacttaaatttttttcttgcaacttt 1428926  T
Q  240 accctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagt-gagggcagtttagtaaaaatgtt 338  Q
    ||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||       ||||||||||  ||||||||||||||||| ||||    
T  1428927 accctcaataaatactcaaacttttctctcacacaatttccaattcaactttaagtttgtccttttcttataaagtaaagggcagtttagtaaaagtgtt 1429026  T
Q  339 atatgtaataattattttatttcatttcttaatatgcgtgtcaa 382  Q
    |||| |||||||||||| |||  ||||||||||||  |||||||    
T  1429027 atatctaataattatttcattcaatttcttaatatatgtgtcaa 1429070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 135 - 374
Target Start/End: Original strand, 12002206 - 12002441
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttcca 234  Q
    |||| |||||||||||| ||| ||||||| |||||    ||||||||||||||||||| ||| |||||| |||||||||||||||||       ||||||    
T  12002206 ctccgttttaaaatgagtgtcgttttagctaaaaa----aaattgttttaaaatgaatgtcattttacatttccaatacaactttaatttttttcttcca 12002301  T
Q  235 actttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaa 334  Q
     ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||       | ||||||   |||||||||||||||||     
T  12002302 gctttaccttcaataaatactccaacttttttctcacacaattttcaatgcaactttaagtttgtctttttcatataaaacaagggcagtttagtaaaag 12002401  T
Q  335 tgttatatgtaataattattttatttcatttcttaatatg 374  Q
    | |||| | | || ||||||| |||||||| |||||||||    
T  12002402 tattatgtctgatgattatttcatttcattccttaatatg 12002441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 140 - 371
Target Start/End: Original strand, 11650021 - 11650250
Alignment:
Q  140 ttttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaacttt 239  Q
    |||||||||| | || | |||||||||||| |  | ||||||| ||||||||| |||||||||| || ||||||||||||||       |||||||||||    
T  11650021 ttttaaaatgtgtgtaactttagcaaaaaaaa--atattgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaacttt 11650118  T
Q  240 accctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgtta 339  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||       ||| |||||| |||||||||||||||||||  ||    
T  11650119 accctcaataaatactccaatttttctctcacacaatttccaatgcaactttaagtttgtctttttcttttaaagtaagggcagtttagtaaaaatacta 11650218  T
Q  340 tatgtaataattattttatttcatttcttaat 371  Q
    ||| ||||  |||||| |||  ||||||||||    
T  11650219 tatctaatggttatttcattcaatttcttaat 11650250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 135 - 417
Target Start/End: Original strand, 43929644 - 43929922
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttcca 234  Q
    |||| ||| |||||||| |||| ||||||||||||   |||||||||| ||||||||| ||| |||    |||||||||||||||||       ||||||    
T  43929644 ctccgtttcaaaatgagtgtcactttagcaaaaaa---aaaattgtttcaaaatgaatgtcaatttcagtttccaatacaactttaattttttccttcca 43929740  T
Q  235 actttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaa 334  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||| || |||||||||||| |       |||||||||| | || ||| ||||||||     
T  43929741 actttaccctcaataaatactcc-acttttctctcacataattttcgatacaactttaagttagtctttttcttataaagtaatggaagtatagtaaaag 43929839  T
Q  335 tgttatatgtaataattattttatttcatttcttaatatgcgtgtcaaactcttaaacgacacttattgtgaaatagagggag 417  Q
    |||||| | |||| ||||||| |||  |||||||||| || ||||||||  ||||||||||||  ||||||||| ||||||||    
T  43929840 tgttatgtctaatgattatttcattcaatttcttaatttgtgtgtcaaaaccttaaacgacacacattgtgaaacagagggag 43929922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 177 - 371
Target Start/End: Complemental strand, 5317731 - 5317537
Alignment:
Q  177 ttgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaat 276  Q
    |||||| ||||||||| ||||||||||||| ||||||||||||||       ||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  5317731 ttgtttcaaaatgaatgtcactttacaatttcaatacaactttaatttttttcttccaactttaccctcaataaatactacaacttttctctc-cacaat 5317633  T
Q  277 tttcaatgcaactttaagtttgnnnnnnncttataaagtga-gggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaat 371  Q
    ||||||||||||||||||||||       |||||||| | | ||||| |||||||||| |||||| | |||| ||||||| |||||||| ||||||    
T  5317632 tttcaatgcaactttaagtttgtctttttcttataaaataaggggcaatttagtaaaagtgttatgtctaatgattatttcatttcattccttaat 5317537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 135 - 364
Target Start/End: Complemental strand, 17920013 - 17919788
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttcca 234  Q
    |||| |||||||||||| |||  ||||||||||||   |||| | ||| ||||||||| |||||||||| |||||||||||||||||       ||||||    
T  17920013 ctccgttttaaaatgagtgtcgctttagcaaaaaa---aaaaatatttcaaaatgaatatcactttacatttccaatacaactttaatttttttcttcca 17919917  T
Q  235 actttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaa 334  Q
    ||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||         ||||||   |||||||||||||||||     
T  17919916 actttaccctcaatatatactctaacttttttctcacacaattttcaatgcaactttaagtttgtctttttaatataaaacaagggcagtttagtaaaag 17919817  T
Q  335 tgttatatgtaataattattttatttcatt 364  Q
    |||||| | |||| ||||||| ||||||||    
T  17919816 tgttatgt-taatgattatttcatttcatt 17919788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 135 - 394
Target Start/End: Complemental strand, 43738446 - 43738191
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttcca 234  Q
    |||||||||||||||||  ||||||||| |||||| |  ||||||||||||||||||| |||||| ||| || ||||||||||| ||       ||| ||    
T  43738446 ctccattttaaaatgag--tcattttagtaaaaaaaa--aaattgttttaaaatgaatgtcacttcacattttcaatacaacttaaatttttttctttca 43738351  T
Q  235 actttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaa 334  Q
    ||||||| ||||||||||||| ||| |||||| |||| |||||||||| | |||||||  |||        |||||||||| | || |||||||||||||    
T  43738350 actttactctcaataaatacttcaatttttctttcacgcaattttcaaagtaactttatatttatctttttcttataaagtaaaggtagtttagtaaaaa 43738251  T
Q  335 tgttatatgtaataattattttatttcatttcttaatatgcgtgtcaaactcttaaacga 394  Q
    | |||| | |||||||||||||||||||||||||||| ||  | ||||| ||||||||||    
T  43738250 tattatgtctaataattattttatttcatttcttaatttgtatatcaaaatcttaaacga 43738191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 144 - 297
Target Start/End: Complemental strand, 15698936 - 15698785
Alignment:
Q  144 aaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccc 243  Q
    |||||||| |||| |||||||||||| |  ||||||||||||||||||| |||||||| | |||||||||||||||||       ||||||||||||| |    
T  15698936 aaaatgagtgtcactttagcaaaaaaaa--aaattgttttaaaatgaatgtcactttatatttccaatacaactttaattttcttcttccaactttactc 15698839  T
Q  244 tcaataaatactccaacttttctctcacacaattttcaatgcaactttaagttt 297  Q
    ||||||||||||| ||||||||||||||| ||||||||||  ||||||||||||    
T  15698838 tcaataaatactcaaacttttctctcacataattttcaatagaactttaagttt 15698785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 140 - 371
Target Start/End: Original strand, 52403443 - 52403668
Alignment:
Q  140 ttttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaacttt 239  Q
    |||||||||||||||||||| ||| |||||    ||||||||||||| ||||| |||||||| | || ||||||||||||||        ||||||||||    
T  52403443 ttttaaaatgagcgtcattt-agctaaaaa----aaattgttttaaa-tgaatgtcactttaaattttcaatacaactttaagttttctattccaacttt 52403536  T
Q  240 accctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgtta 339  Q
    ||||||||||||||||| ||||| ||||||||| |||||||| ||||||||||| ||||       |||||||||| ||||||||||| ||| | |||||    
T  52403537 accctcaataaatactcaaacttctctctcacataattttcagtgcaactttaattttgtcttttccttataaagtaagggcagtttaataacagtgtta 52403636  T
Q  340 tatgtaataattattttatttcatttcttaat 371  Q
    |||  ||| ||||||| ||| |||||||||||    
T  52403637 tatccaatgattatttcattccatttcttaat 52403668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 257 - 404
Target Start/End: Complemental strand, 10691029 - 10690882
Alignment:
Q  257 caacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattatttt 356  Q
    |||||||| |||||||||||||||||||||||||||||||||       ||||  |||| || ||||||||||||||||||||||| |||| |||||||     
T  10691029 caacttttatctcacacaattttcaatgcaactttaagtttgtctttttcttacgaagtaagtgcagtttagtaaaaatgttatatctaatgattatttc 10690930  T
Q  357 atttcatttcttaatatgcgtgtcaaactcttaaacgacacttattgt 404  Q
    |||||||||||||||||| ||| ||||  ||||||||||||| |||||    
T  10690929 atttcatttcttaatatgtgtggcaaaaccttaaacgacactcattgt 10690882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 140 - 298
Target Start/End: Original strand, 26252082 - 26252239
Alignment:
Q  140 ttttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaacttt 239  Q
    |||||||||||| |||| ||||| | ||||   |||||||||| ||||||||| |||||||||| |||||||||||||| ||       |||||||||||    
T  26252082 ttttaaaatgagtgtcactttagaagaaaa---aaaattgtttcaaaatgaatgtcactttacatttccaatacaacttaaatttttttcttccaacttt 26252178  T
Q  240 accctcaataaatactccaactttt--ctctcacacaattttcaatgcaactttaagtttg 298  Q
    ||||| ||||||||||| |||||||  ||||||||||||||||||||||||||||||||||    
T  26252179 acccttaataaatactctaacttttttctctcacacaattttcaatgcaactttaagtttg 26252239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 135 - 298
Target Start/End: Complemental strand, 17806567 - 17806408
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttcca 234  Q
    |||| ||| |||||||| |||| |||||| |||||    ||||||||||||||||| | || ||||||| |||||||||||||||||       ||||||    
T  17806567 ctccgtttcaaaatgagtgtcactttagccaaaaa----aaattgttttaaaatgagtgtcgctttacatttccaatacaactttaattttttacttcca 17806472  T
Q  235 actttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttg 298  Q
    | |||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  17806471 attttaccttcaataaatactccaacttttctctcatacaattttcaatgcaattttaagtttg 17806408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 158 - 422
Target Start/End: Original strand, 44583751 - 44584011
Alignment:
Q  158 tttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactcc 257  Q
    |||||||||||| | ||| |||||||||||||||| |||| ||||| ||  |||||||||||||       ||||  |||||||||| ||||| |||||     
T  44583751 tttagcaaaaaaaaaaaatttgttttaaaatgaatgtcaccttacatttttaatacaactttaatttttttcttctgactttacccttaataagtactct 44583850  T
Q  258 aacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattatttta 357  Q
    ||||||||| ||||| | ||||||||||||| |||||||||       |||||||| | | |||||||||| |||| |||||| | |||| |||||||||    
T  44583851 aacttttctttcacatagttttcaatgcaacattaagtttgtctttttcttataaaat-aaggcagtttaggaaaattgttatgtctaatgattatttta 44583949  T
Q  358 tttcatttcttaatatgcgtgtcaaactcttaaacgacacttattgtgaaatagagggagcataa 422  Q
    |||||||||||||| || ||||||||  ||   |||||||| ||||||||| ||| |||| ||||    
T  44583950 tttcatttcttaatttgtgtgtcaaaacct---acgacactcattgtgaaacagatggagtataa 44584011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 173 - 298
Target Start/End: Complemental strand, 255072 - 254944
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnn-cttccaactttaccctcaataaatactccaacttttct--ctc 269  Q
    |||||||||| ||||||||| || ||||||| ||||||| |||||||||        ||||||||||||||||||||||||||||||||||||||  |||    
T  255072 aaaattgtttcaaaatgaatgtcgctttacatttccaatgcaactttaattttttttcttccaactttaccctcaataaatactccaacttttctcactc 254973  T
Q  270 acacaattttcaatgcaactttaagtttg 298  Q
    |||||||||||||||||||||||||||||    
T  254972 acacaattttcaatgcaactttaagtttg 254944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 182 - 417
Target Start/End: Original strand, 2245789 - 2246025
Alignment:
Q  182 ttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctc--acacaatttt 279  Q
    ||||||||||| |||| ||||| || ||||||||||||||       ||| |||||||||||||||||||||||| ||||||||||||   |||||||||    
T  2245789 ttaaaatgaatgtcaccttacattttcaatacaactttaatctttttctttcaactttaccctcaataaatactcaaacttttctctctttcacaatttt 2245888  T
Q  280 caatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaatatgcgtgt 379  Q
    ||||||| |||||||||||       |||||||||  | | ||||||||||||||| |||| | |||| |||| || ||| ||||||||||| |  ||||    
T  2245889 caatgcatctttaagtttgtctttttcttataaaggaatgacagtttagtaaaaatattatgtttaatgattacttcattccatttcttaatctatgtgt 2245988  T
Q  380 caaactcttaaacgacacttattgtgaaatagagggag 417  Q
    ||||| ||||||| |||||  ||||||||  |||||||    
T  2245989 caaac-cttaaacaacactccttgtgaaacggagggag 2246025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 184 - 298
Target Start/End: Complemental strand, 44582927 - 44582811
Alignment:
Q  184 aaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttc--tctcacacaattttca 281  Q
    ||||| ||| |||||||||| |||||||||||||||||       |||||||||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  44582927 aaaataaatgtcactttacatttccaatacaactttaatttttttcttccaactttaccctcaataaatactccaacttttctatctcacataattttca 44582828  T
Q  282 atgcaactttaagtttg 298  Q
    |||||||||||||||||    
T  44582827 atgcaactttaagtttg 44582811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 173 - 333
Target Start/End: Original strand, 22664933 - 22665091
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||||||||| ||||||||| |||||||||| |||||||||||| ||||       ||||||||||||||||||||||||||||||||  ||||||| ||    
T  22664933 aaaattgtttcaaaatgaatgtcactttacatttccaatacaacgttaattaatttcttccaactttaccctcaataaatactccaac--ttctctctca 22665030  T
Q  273 caattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaa 333  Q
    ||||||| ||| ||||||||||||||       |||||||||| |||  ||||||||||||    
T  22665031 caatttttaattcaactttaagtttgtcttgttcttataaagtaaggttagtttagtaaaa 22665091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 184 - 298
Target Start/End: Complemental strand, 45377297 - 45377183
Alignment:
Q  184 aaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaattttcaat 283  Q
    ||||||||| |||||||||| ||||||||||||||||        || |||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  45377297 aaaatgaatgtcactttacatttccaatacaactttactttttttctcccaactttaccctcaatagatactccaacttttctctcgcacaattttcaat 45377198  T
Q  284 gcaactttaagtttg 298  Q
    | |||||||||||||    
T  45377197 gaaactttaagtttg 45377183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 255 - 371
Target Start/End: Complemental strand, 24041100 - 24040984
Alignment:
Q  255 tccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattatt 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||||||| |||||| | |||| ||||||    
T  24041100 tccaacttttctctcacacaattttcaatgcaactttaagtttgtctttttcttataaagtaagggcagtttagtaaaagtgttatgtctaatgattatt 24041001  T
Q  355 ttatttcatttcttaat 371  Q
    | ||| |||| ||||||    
T  24041000 tcattccattccttaat 24040984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 229 - 298
Target Start/End: Complemental strand, 672383 - 672314
Alignment:
Q  229 cttccaactttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttg 298  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  672383 cttccaactttaccctcaataaatactctaacttttctctcacacaattttcaatgcaaatttaagtttg 672314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 135 - 298
Target Start/End: Original strand, 44024505 - 44024666
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttcca 234  Q
    |||| |||||||||||| |||  ||||||||||||    ||||||||| |||||||||  | ||||||| || |||| |||||||||       ||||||    
T  44024505 ctccgttttaaaatgagtgtcgctttagcaaaaaa----aaattgtttcaaaatgaatgccgctttacattttcaatgcaactttaatttttttcttcca 44024600  T
Q  235 actttaccctcaataaatactccaacttt--tctctcacacaattttcaatgcaactttaagtttg 298  Q
    ||||||||||||||||||||| |||||||  ||||||||||||||||||||  |||||||||||||    
T  44024601 actttaccctcaataaatacttcaacttttctctctcacacaattttcaatttaactttaagtttg 44024666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 144 - 340
Target Start/End: Complemental strand, 48260039 - 48259854
Alignment:
Q  144 aaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccc 243  Q
    |||||||| |||| |||||||||||| |  ||||||||| ||||||||| |||||||||| |||||||||||||||||       |||||||||||||||    
T  48260039 aaaatgagtgtcactttagcaaaaaaaa--aaattgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactttaccc 48259942  T
Q  244 tcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttat 340  Q
    |         ||| ||||||||| ||||||||||||||||||||||||||||||        |||||||||  ||||||||||| ||||| ||||||    
T  48259941 t---------ctcaaacttttctttcacacaattttcaatgcaactttaagtttatctttttcttataaagcaagggcagtttaataaaagtgttat 48259854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 173 - 371
Target Start/End: Original strand, 6332160 - 6332359
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnn-cttccaactttaccctcaataaatactccaacttttctctcac 271  Q
    |||||||||||||||||||| |||||||||| ||  || ||||||||||        ||| ||||||||| || ||||||||||||||||||| ||||||    
T  6332160 aaaattgttttaaaatgaatgtcactttacatttttaacacaactttaattttttttctttcaactttactcttaataaatactccaacttttttctcac 6332259  T
Q  272 acaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaat 371  Q
    ||||||||||||| ||||||| |||||       | ||||||   | ||||||||||||||| |||||| | |||| ||||||| |||  ||||||||||    
T  6332260 acaattttcaatgtaactttatgtttgtctttttcatataaaacaaaggcagtttagtaaaagtgttatgtctaatgattatttcattcaatttcttaat 6332359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 135 - 298
Target Start/End: Original strand, 12851701 - 12851860
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttcca 234  Q
    |||||||| |||||||| |||  |||| |||||||    ||||||||| ||||||||| |||||||||| |||||||| ||||||||       || |||    
T  12851701 ctccatttcaaaatgagtgtctctttaacaaaaaa----aaattgtttcaaaatgaatgtcactttacatttccaatagaactttaatttttttctccca 12851796  T
Q  235 actttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttg 298  Q
    ||||||||||||||| |||||| ||||||||  ||| |||||||| ||||||||||||| ||||    
T  12851797 actttaccctcaatatatactcaaacttttcattcatacaatttttaatgcaactttaattttg 12851860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 173 - 371
Target Start/End: Complemental strand, 50350016 - 50349817
Alignment:
Q  173 aaaattgttttaaaatgaattt--cactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctca 270  Q
    |||||||||| ||||||||| |  ||||||||| |||||||||||||||||       ||||||       ||||||||||||||| |||||||||||||    
T  50350016 aaaattgtttcaaaatgaatatgtcactttacatttccaatacaactttaatttttttcttcca-------cctcaataaatactcaaacttttctctca 50349924  T
Q  271 cacaattttcaatgcaactttaagtttgnnnnnnnc------ttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatt 364  Q
    ||||||||||||||||||||||||||||       |      ||||||||| ||||||||||||||||| |||||| | |||| ||||||| ||| ||||    
T  50349923 cacaattttcaatgcaactttaagtttgtctttttcttataattataaagtaagggcagtttagtaaaagtgttatgtctaatgattatttcattccatt 50349824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 135 - 340
Target Start/End: Original strand, 2458968 - 2459167
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttcca 234  Q
    |||| ||| |||||||| ||| ||||||| ||||| ||    |||||| ||||||||| || ||||||| || |||| |||||||||       ||||||    
T  2458968 ctccgtttcaaaatgagtgtcgttttagccaaaaaaat----ttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaatttttttcttcca 2459063  T
Q  235 actttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaa 334  Q
    ||||||||||||| |||||||| |||||||||||  ||||||||||||| ||||||||||||||       |||||||||| |||  | ||||||||||     
T  2459064 actttaccctcaacaaatactcaaacttttctct--cacaattttcaatacaactttaagtttgtatttttcttataaagtaaggttattttagtaaaat 2459161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 135 - 298
Target Start/End: Complemental strand, 28200417 - 28200255
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaa-tacaactttaannnnnnncttcc 233  Q
    |||| |||||||||||| ||| ||||||  |||||    ||||||||| ||||||||| || || |||| || ||| | |||||||||       |||||    
T  28200417 ctccgttttaaaatgagtgtcgttttagtcaaaaa----aaattgtttcaaaatgaatgtcgctctacattttcaaatgcaactttaatttttttcttcc 28200322  T
Q  234 aactttaccctcaataaatactccaacttttc--tctcacacaattttcaatgcaactttaagtttg 298  Q
    ||||||||||||||||||||||||||||||||  |||| ||||||||||||| ||||||||||||||    
T  28200321 aactttaccctcaataaatactccaacttttctctctcgcacaattttcaatacaactttaagtttg 28200255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 261 - 374
Target Start/End: Complemental strand, 37437474 - 37437360
Alignment:
Q  261 ttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaa-tgttatatgtaataattattttatt 359  Q
    ||||||||||||||||||||||||||||||||||||||       |||||||||| |||||| ||||||||||| |||||| | |||| | ||||| |||    
T  37437474 ttttctctcacacaattttcaatgcaactttaagtttgtctttttcttataaagtaagggcaatttagtaaaaagtgttatgtctaatgaatatttcatt 37437375  T
Q  360 tcatttcttaatatg 374  Q
    ||||| |||||||||    
T  37437374 tcattccttaatatg 37437360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 184 - 370
Target Start/End: Original strand, 40719020 - 40719206
Alignment:
Q  184 aaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaattttcaat 283  Q
    ||||||||| ||| |||||| ||  |||||||||||||       |||||||||||||| ||||||||||||||||||||| ||| |||||||| |||||    
T  40719020 aaaatgaatgtcaatttacatttttaatacaactttaatttttttcttccaactttaccttcaataaatactccaacttttttcttacacaattctcaat 40719119  T
Q  284 gcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaa 370  Q
     ||||||||| |||        | ||||||   | ||||||||||||||||||| || | |||| ||||||| |||||||| |||||    
T  40719120 acaactttaaatttatctttttcatataaaacaatggcagtttagtaaaaatgtgatgtctaatgattatttcatttcattccttaa 40719206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 50158465 - 50158345
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnn-cttccaactttaccctcaataaatactccaacttttctctcac 271  Q
    |||||| ||| ||||||||| |||||||||| || ||||||||||||||        |||||||||||| |||||| |||| ||||||||||||||||||    
T  50158465 aaaattatttcaaaatgaatgtcactttacattttcaatacaactttaattttttttcttccaactttaacctcaaaaaattctccaacttttctctcac 50158366  T
Q  272 acaattttcaatgcaactttaa 293  Q
    |||||||| |||||||||||||    
T  50158365 acaatttt-aatgcaactttaa 50158345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 255 - 422
Target Start/End: Complemental strand, 1430613 - 1430445
Alignment:
Q  255 tccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagt-gagggcagtttagtaaaaatgttatatgtaataattat 353  Q
    ||||||||||||| |||||||||| |||||||||||||||||||       ||||||||||  || |||||||||||||| |||||||| |||| |||||    
T  1430613 tccaacttttctcacacacaatttccaatgcaactttaagtttgtctttttcttataaagtaaagtgcagtttagtaaaagtgttatatctaattattat 1430514  T
Q  354 tttatttcatttcttaatatgcgtgtcaaactcttaaacgacacttattgtgaaatagagggagcataa 422  Q
    || |||  |||||||||| || ||| |||   || |||||||||| ||| | |||| ||||||| ||||    
T  1430513 ttcattaaatttcttaatctgtgtgccaacacctaaaacgacactcattttaaaatggagggagtataa 1430445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 179 - 298
Target Start/End: Complemental strand, 42650402 - 42650282
Alignment:
Q  179 gttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaactttt-ctctcacacaatt 277  Q
    |||||||||| ||| || ||||||| ||| |||||||||||||       |||||| ||||||| |||| ||||||| |||||||| |||||||||||||    
T  42650402 gttttaaaataaatgtcgctttacatttctaatacaactttaatttttttcttccagctttaccttcaagaaatacttcaactttttctctcacacaatt 42650303  T
Q  278 ttcaatgcaactttaagtttg 298  Q
    |||||||||| ||||||||||    
T  42650302 ttcaatgcaattttaagtttg 42650282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 144 - 298
Target Start/End: Complemental strand, 11134646 - 11134493
Alignment:
Q  144 aaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccc 243  Q
    |||||||| ||| ||||||| ||||| | |||  ||||| ||||||||| |||||||||| || |||| |||||||||        |||||||||| |||    
T  11134646 aaaatgagtgtcgttttagctaaaaaaaaaaa--tgtttcaaaatgaatgtcactttacattttcaatgcaactttaatttcttt-ttccaactttgccc 11134550  T
Q  244 tcaataaatactccaacttttc--tctcacacaattttcaatgcaactttaagtttg 298  Q
    ||||||||||||||||||||||  |||| |||||||| |||||||||| ||||||||    
T  11134549 tcaataaatactccaacttttctctctctcacaatttccaatgcaactataagtttg 11134493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 230 - 294
Target Start/End: Complemental strand, 5854327 - 5854261
Alignment:
Q  230 ttccaactttaccctcaataaatactccaacttttc--tctcacacaattttcaatgcaactttaag 294  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  5854327 ttccaactttatcctcaataaatactccaacttttcgatctcacacaattttcaatgcaaccttaag 5854261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 173 - 374
Target Start/End: Complemental strand, 40061055 - 40060863
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||||| ||| ||||||||| |||||||||| || ||||||||||||||        ||| |||||||||||         ||||||||||||||| |||    
T  40061055 aaaattatttcaaaatgaatgtcactttacattttcaatacaactttaattttttttttcaaactttaccct---------ctccaacttttctcttaca 40060965  T
Q  273 caattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaata 372  Q
     |||||||||||||||| |||  ||        |||||||||| |||||| |||||||||| |||||| | |||| ||||||| ||||||||||||||||    
T  40060964 aaattttcaatgcaactataaaattatctttttcttataaagtaagggcaatttagtaaaagtgttatgtctaatcattatttcatttcatttcttaata 40060865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 135 - 290
Target Start/End: Complemental strand, 15647253 - 15647104
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttcca 234  Q
    |||||||| | |||||| |||| ||||||||||||    ||||||||| ||||||||| |||||||||| || |||||||| |||         || |||    
T  15647253 ctccatttcataatgagtgtcactttagcaaaaaa----aaattgtttcaaaatgaatgtcactttacattttcaatacaaattt--tttttttctccca 15647160  T
Q  235 actttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactt 290  Q
    |||||||||| |||||||||||||||||||||||  || |||||||||| ||||||    
T  15647159 actttacccttaataaatactccaacttttctcttgcataattttcaatccaactt 15647104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 135 - 221
Target Start/End: Complemental strand, 84686 - 84604
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaa 221  Q
    |||| ||||||| |||| |||| ||||||||||||    ||||||||||||||||||| |||||||||| |||||||||||||||||    
T  84686 ctccgttttaaattgagtgtcactttagcaaaaaa----aaattgttttaaaatgaatgtcactttacatttccaatacaactttaa 84604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 257 - 378
Target Start/End: Complemental strand, 43105676 - 43105555
Alignment:
Q  257 caacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattatttt 356  Q
    ||||||||||||||| ||||||||||||||| ||||||||||       |||||||| | | || | |||||||||| |||||| | |||| |||||||     
T  43105676 caacttttctctcacgcaattttcaatgcaattttaagtttgtctttttcttataaaataatggtaatttagtaaaagtgttatgtctaatgattatttc 43105577  T
Q  357 atttcatttcttaatatgcgtg 378  Q
    |||  |||||||||||||||||    
T  43105576 attcaatttcttaatatgcgtg 43105555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 255 - 355
Target Start/End: Complemental strand, 84594 - 84494
Alignment:
Q  255 tccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattatt 354  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||       |||||||||| ||| || |||||||||| |||||| | |||| ||||||    
T  84594 tccaatttttctctcgcacaattttcaatgcaactttaagtttgtctttttcttataaagtaaggacattttagtaaaagtgttatgtctaatgattatt 84495  T
Q  355 t 355  Q
    |    
T  84494 t 84494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Complemental strand, 28456003 - 28455952
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  28456003 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 28455952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Complemental strand, 32007203 - 32007152
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  32007203 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 32007152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 41039302 - 41039353
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  41039302 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 41039353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Complemental strand, 41808331 - 41808280
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  41808331 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 41808280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 45813010 - 45813061
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  45813010 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 45813061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 601 - 651
Target Start/End: Original strand, 5055788 - 5055838
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  5055788 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 5055838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 601 - 651
Target Start/End: Complemental strand, 48660150 - 48660100
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  48660150 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 48660100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 139 - 221
Target Start/End: Complemental strand, 9552518 - 9552440
Alignment:
Q  139 attttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaa 221  Q
    ||||||||||||| |||| ||||  ||||||    ||||||||||||||||||| ||| |||||| |||||||||||||||||    
T  9552518 attttaaaatgagtgtcactttaataaaaaa----aaattgttttaaaatgaatgtcattttacatttccaatacaactttaa 9552440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 258 - 340
Target Start/End: Original strand, 49894861 - 49894943
Alignment:
Q  258 aacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttat 340  Q
    ||||||||||||||||||||||||||| |||||||||||||       |||||||||| |||  | |||||||||| ||||||    
T  49894861 aacttttctctcacacaattttcaatgtaactttaagtttgtcttattcttataaagtaaggttattttagtaaaattgttat 49894943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 24041184 - 24041111
Alignment:
Q  144 aaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaa 221  Q
    ||||||||||||  ||||||||||||    ||||||||| ||||||||| |||||||||| || ||||||||||||||    
T  24041184 aaaatgagcgtcgctttagcaaaaaa----aaattgtttcaaaatgaatgtcactttacattttcaatacaactttaa 24041111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 254 - 355
Target Start/End: Original strand, 30006205 - 30006306
Alignment:
Q  254 ctccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattat 353  Q
    ||||||||||||||||| |||||||||||||||||||||| |||        |||||||||| || ||| |||||||| | |||||| | |||| |||||    
T  30006205 ctccaacttttctctcaaacaattttcaatgcaactttaaatttatctttttcttataaagtaagagcaatttagtaatagtgttatgtctaatgattat 30006304  T
Q  354 tt 355  Q
    ||    
T  30006305 tt 30006306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 38132326 - 38132278
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaa 221  Q
    |||||||||| ||||||||| |||||||||| |||||||||||||||||    
T  38132326 aaaattgtttcaaaatgaatgtcactttacatttccaatacaactttaa 38132278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 600 - 651
Target Start/End: Complemental strand, 192544 - 192493
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||  |||||||||||||||||||||||||||    
T  192544 ggtcttagatgaagtggtaatccgctgaaaataaactcacacacaactgtga 192493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 29994382 - 29994433
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||||||| ||||| ||||||||||||||| |||||    
T  29994382 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaattgtga 29994433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 41761410 - 41761461
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||| | ||||||||||| ||| |||||||||||||||||||||||||||    
T  41761410 ggtcttggatgaagtggtaatccactgaaaataaactcacacacaactgtga 41761461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 255 - 298
Target Start/End: Original strand, 43755104 - 43755147
Alignment:
Q  255 tccaacttttctctcacacaattttcaatgcaactttaagtttg 298  Q
    ||||||||||||||||||||||||||||  ||||||||||||||    
T  43755104 tccaacttttctctcacacaattttcaaaacaactttaagtttg 43755147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 651
Target Start/End: Complemental strand, 20876 - 20826
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| ||||||||||| ||| | |||||||||||||||||||||||||    
T  20876 gtcttagatgaagtggtaatccactaaaaataaactcacacacaactgtga 20826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 651
Target Start/End: Complemental strand, 13109898 - 13109848
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||||||||||    
T  13109898 gtcttagatgaagtggtaatccactgaaattaaactcacacacaactgtga 13109848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 602 - 651
Target Start/End: Complemental strand, 35945924 - 35945875
Alignment:
Q  602 tcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||| ||||||||||| ||| |||||||||| ||||||||||||||||    
T  35945924 tcttagatgaagtggtaatccactgaaaataaattcacacacaactgtga 35945875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 26582919 - 26582967
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaa 221  Q
    |||||||||||||||| ||| | |||||||| |||||||||||||||||    
T  26582919 aaaattgttttaaaataaatgttactttacatttccaatacaactttaa 26582967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 604 - 651
Target Start/End: Complemental strand, 7275806 - 7275759
Alignment:
Q  604 ttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||| ||||||||||||||| ||||| |||||||| ||||||||||||    
T  7275806 ttagatgaagtggtaaaccactgaaattaaactcatacacaactgtga 7275759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 600 - 647
Target Start/End: Complemental strand, 11688392 - 11688345
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaact 647  Q
    |||||| | ||||||||||| ||| |||||||||||||||||||||||    
T  11688392 ggtcttggatgaagtggtaatccactgaaaataaactcacacacaact 11688345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 295
Target Start/End: Complemental strand, 38132268 - 38132226
Alignment:
Q  255 tccaacttttct--ctcacacaattttcaatgcaactttaagt 295  Q
    ||||||||||||  |||||||||||||||||||||||||||||    
T  38132268 tccaacttttctttctcacacaattttcaatgcaactttaagt 38132226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 600 - 651
Target Start/End: Complemental strand, 39276479 - 39276428
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||  ||||||||||| ||| |||||||||||||||||| ||||||||    
T  39276479 ggtcttaaatgaagtggtaatccactgaaaataaactcacacataactgtga 39276428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 364
Target Start/End: Complemental strand, 45749554 - 45749466
Alignment:
Q  276 ttttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatt 364  Q
    ||||||||| || ||||||||||       |||||||||| ||||| ||||||||||| |||||| | |||| ||||||||||| ||||    
T  45749554 ttttcaatgtaaatttaagtttgtctttttcttataaagtaagggcggtttagtaaaagtgttatgtctaatgattattttattccatt 45749466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 34047422 - 34047365
Alignment:
Q  140 ttttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcacttt 200  Q
    |||||||||||| ||| |||||||||||||   |||||||||| ||||||||| |||||||    
T  34047422 ttttaaaatgagtgtcgttttagcaaaaaa---aaaattgtttcaaaatgaatgtcacttt 34047365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 651
Target Start/End: Complemental strand, 49783835 - 49783785
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| ||||||||||||||| ||||| |||| ||||| ||||||||||    
T  49783835 gtcttagatgaagtggtaaaccactgaaattaaattcacatacaactgtga 49783785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 255 - 298
Target Start/End: Complemental strand, 50591396 - 50591351
Alignment:
Q  255 tccaacttttctct--cacacaattttcaatgcaactttaagtttg 298  Q
    ||||||||||||||  ||||||||||||||||||| ||||||||||    
T  50591396 tccaacttttctctatcacacaattttcaatgcaattttaagtttg 50591351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 294
Target Start/End: Complemental strand, 9552425 - 9552392
Alignment:
Q  261 ttttctctcacacaattttcaatgcaactttaag 294  Q
    |||||||||||| |||||||||||||||||||||    
T  9552425 ttttctctcacataattttcaatgcaactttaag 9552392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 651
Target Start/End: Complemental strand, 21939069 - 21939020
Alignment:
Q  602 tcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||| ||||||||||||||  ||||| ||||||| |||||||||||||    
T  21939069 tcttagatgaagtggtaaaccgctgaaattaaactcgcacacaactgtga 21939020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 651
Target Start/End: Original strand, 26264537 - 26264586
Alignment:
Q  602 tcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||| ||||||| |||  |||||||| |||||||||||||||||||||    
T  26264537 tcttagatgaagtgataatacattgaaattaaactcacacacaactgtga 26264586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 651
Target Start/End: Original strand, 32982351 - 32982400
Alignment:
Q  602 tcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||| |||||| |||||||| |||||  ||||||||||||||||||||    
T  32982351 tcttagatgaagtagtaaaccactgaaatcaaactcacacacaactgtga 32982400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 1430671 - 1430623
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaa 221  Q
    |||| ||||| ||||||||| |||||||||| ||| |||||||||||||    
T  1430671 aaaaatgtttcaaaatgaatgtcactttacatttctaatacaactttaa 1430623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 35149539 - 35149491
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaa 221  Q
    ||||||||||  |||| |||||||||||| | |||||||||||||||||    
T  35149539 aaaattgtttcgaaataaatttcactttatatttccaatacaactttaa 35149491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 140 - 192
Target Start/End: Original strand, 48008972 - 48009023
Alignment:
Q  140 ttttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaat 192  Q
    ||||||||| || ||| ||||||||||||| | ||||||||||||||||||||    
T  48008972 ttttaaaataagtgtcgttttagcaaaaaaaa-aaaattgttttaaaatgaat 48009023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 48025445 - 48025384
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcacttt 200  Q
    |||| |||||||||||| ||| ||||||||||||    |||||||||| ||||||||| |||||||    
T  48025445 ctccgttttaaaatgagtgtcgttttagcaaaaa----aaaattgtttcaaaatgaatgtcacttt 48025384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 97; Significance: 2e-47; HSPs: 72)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 173 - 404
Target Start/End: Original strand, 11257536 - 11257764
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||||||||||||||||||| |||||||||| ||  |||||||||||||       ||||||||||||  ||||||||||||| ||||||||||||||||    
T  11257536 aaaattgttttaaaatgaatgtcactttacatttttaatacaactttaattttt--cttccaactttaatctcaataaatacttcaacttttctctcaca 11257633  T
Q  273 caattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaata 372  Q
    ||||||||||||||||||||||||||       |||||||| | | || ||||||||||||||||| | | |||||||||||| ||| |||||||||||     
T  11257634 caattttcaatgcaactttaagtttgtctgtttcttataaaataaaggtagtttagtaaaaatgtt-tttttaataattatttcattccatttcttaatt 11257732  T
Q  373 tgcgtgtcaaactcttaaacgacacttattgt 404  Q
    || |||||||| ||||||||| |||| |||||    
T  11257733 tgtgtgtcaaaatcttaaacggcactcattgt 11257764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 135 - 417
Target Start/End: Original strand, 7612458 - 7612735
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttcca 234  Q
    |||| |||||||||||| |||| |||| |||||||    ||||||||||||||||||| |||||||||| || ||||||||| ||||       ||||||    
T  7612458 ctcccttttaaaatgagtgtcactttaacaaaaaa----aaattgttttaaaatgaatgtcactttacattttcaatacaacattaagttttctcttcca 7612553  T
Q  235 actttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaa 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||| ||||||||||||| |||     
T  7612554 actttaccctaaataaatactccaacttttctctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttagt-aaag 7612652  T
Q  335 tgttatatgtaataattattttatttcatttcttaatatgcgtgtcaaactcttaaacgacacttattgtgaaatagagggag 417  Q
     |||||||  ||| ||||||| |||  |||||||||| || ||| |||| ||| || | ||||| ||| | |||| |||||||    
T  7612653 cgttatatccaatgattatttcattctatttcttaatctgtgtgccaaaatctaaagcaacactcattttaaaatggagggag 7612735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 135 - 291
Target Start/End: Original strand, 9022355 - 9022507
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttcca 234  Q
    |||| ||||||||||||  |||||||||| |||||||    ||||||||||||||||| |||||||||  |||||||||||||||||       ||||||    
T  9022355 ctccgttttaaaatgagtatcattttagccaaaaaga----attgttttaaaatgaatgtcactttacgtttccaatacaactttaatttttttcttcca 9022450  T
Q  235 actttaccctcaataaatactccaacttttctctcacacaattttcaatgcaacttt 291  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  9022451 actttaccctcaataaatactccaacttttttctcacacaattttcaatgcaacttt 9022507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 177 - 408
Target Start/End: Complemental strand, 27109975 - 27109743
Alignment:
Q  177 ttgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaat 276  Q
    |||||| ||||||||| ||||||| || |||||||||||||||||       |||||||||||||||||||||||||||| |||||||||||||||||||    
T  27109975 ttgtttcaaaatgaatgtcactttccatttccaatacaactttaatttttttcttccaactttaccctcaataaatactctaacttttctctcacacaat 27109876  T
Q  277 tttcaatgcaactttaagtttgnnnnnnncttataaagt-gagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaatatgc 375  Q
    || |||||||||||||||||||       ||||||||||  | | || |||||||||| |||||||| |||| ||||||| |||  |||||||||||||     
T  27109875 ttccaatgcaactttaagtttgtccttttcttataaagtaaaagacaatttagtaaaagtgttatatctaatgattatttcattctatttcttaatatgt 27109776  T
Q  376 gtgtcaaactcttaaacgacacttattgtgaaa 408  Q
    ||| |||   || |||||||||| ||| |||||    
T  27109775 gtgccaacacctaaaacgacactcattttgaaa 27109743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 140 - 340
Target Start/End: Complemental strand, 14541934 - 14541737
Alignment:
Q  140 ttttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaacttt 239  Q
    |||||||||||| |||  ||||||||||||   |||||||||| ||||||||| |||||||||| ||| |||||||||||||       |||||||||||    
T  14541934 ttttaaaatgagtgtcgctttagcaaaaaa---aaaattgtttcaaaatgaatgtcactttacatttctaatacaactttaatttttttcttccaacttt 14541838  T
Q  240 accctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgtta 339  Q
    | ||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||       |||||||||| |||  | |||||||||| |||||    
T  14541837 atccttaataaatacttcaacttttctctctcacaattttcaatgcaactttaagtttgtcttgttcttataaagtaaggttattttagtaaaattgtta 14541738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 177 - 374
Target Start/End: Original strand, 22601134 - 22601330
Alignment:
Q  177 ttgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaat 276  Q
    |||||| ||||||||| |||||||||| |||||||||||||||||       ||||||||||||||||| |||||||||||||| ||||||||||| |||    
T  22601134 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattgttt-cttccaactttaccctcgataaatactccaacctttctctcacagaat 22601232  T
Q  277 tttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaatatg 374  Q
    ||||||||||||||||||||||       |||||||||| | | || ||||||||||  ||||| | |||| ||||||| |||| |||  ||||||||    
T  22601233 tttcaatgcaactttaagtttgtctttttcttataaagtaaagacaatttagtaaaagagttatgtctaatgattatttcattttattcattaatatg 22601330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 173 - 371
Target Start/End: Complemental strand, 5588632 - 5588428
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||||||||||||| ||||| ||| |||||| |||||||||||||||||       |||||||||||||| ||||||||||||| |||||||||||||||    
T  5588632 aaaattgttttaaactgaatgtcaatttacatttccaatacaactttaatttttttcttccaactttaccttcaataaatactcaaacttttctctcaca 5588533  T
Q  273 caattttc-------aatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcattt 365  Q
    ||| ||||       |||| |||||||||||||       |||||||| ||| |||||||||||||||||||||| | |||| ||||||| |||  ||||    
T  5588532 caaatttcaatgtaaaatgtaactttaagtttgtctttttcttataaattga-ggcagtttagtaaaaatgttatgtttaatgattatttcattatattt 5588434  T
Q  366 cttaat 371  Q
    ||||||    
T  5588433 cttaat 5588428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 180 - 298
Target Start/End: Complemental strand, 8382629 - 8382511
Alignment:
Q  180 ttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaatttt 279  Q
    ||||||||||||| |||||||||| || ||||||||||||||       ||  ||||||||||||||||| |||||||||||||||||||||||||||||    
T  8382629 ttttaaaatgaatgtcactttacattttcaatacaactttaatttttttctctcaactttaccctcaatatatactccaacttttctctcacacaatttt 8382530  T
Q  280 caatgcaactttaagtttg 298  Q
    |||||||||| ||||||||    
T  8382529 caatgcaactataagtttg 8382511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 134 - 360
Target Start/End: Original strand, 30788894 - 30789116
Alignment:
Q  134 tctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttcc 233  Q
    ||||||||||||||| |  |||| ||||||||||||    ||| ||||||||||| ||| ||||||||||  | ||||||||||||||       ||||     
T  30788894 tctccattttaaaataaatgtcactttagcaaaaaa----aaaatgttttaaaataaatgtcactttacatattcaatacaactttaatttttttcttct 30788989  T
Q  234 aactttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaa 333  Q
    ||||||||||| | ||||||||||||||||||||||||| |||||||||| ||||||||| ||||       |||||||||| ||| || |||| |||||    
T  30788990 aactttacccttagtaaatactccaacttttctctcacataattttcaatacaactttaaatttgtctttttcttataaagtaaggacaatttaataaaa 30789089  T
Q  334 atgttatatgtaataattattttattt 360  Q
     |||||| | |||| ||||||| ||||    
T  30789090 gtgttatgtctaatgattatttcattt 30789116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 179 - 298
Target Start/End: Complemental strand, 3095656 - 3095537
Alignment:
Q  179 gttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaattt 278  Q
    |||||||||||||| | |||||||| || ||||||||||||||       || |||||||||||||||||||||||| ||||||||||||| |||| |||    
T  3095656 gttttaaaatgaatgttactttacattttcaatacaactttaattttttcctcccaactttaccctcaataaatacttcaacttttctctcgcacacttt 3095557  T
Q  279 tcaatgcaactttaagtttg 298  Q
    ||||||||||||||||||||    
T  3095556 tcaatgcaactttaagtttg 3095537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 179 - 298
Target Start/End: Complemental strand, 34461737 - 34461615
Alignment:
Q  179 gttttaaaatgaatttcactttacaattccaatacaactttaannnnnnn-cttccaactttaccctcaataaatactccaacttttc--tctcacacaa 275  Q
    |||| ||||||||| |||||||||| |||||||||||||||||        ||||||||||||||||||||||| |||||||||||||  ||||||||||    
T  34461737 gtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttcttccaactttaccctcaataaaaactccaacttttctgtctcacacaa 34461638  T
Q  276 ttttcaatgcaactttaagtttg 298  Q
    |||||||||||||||||||||||    
T  34461637 ttttcaatgcaactttaagtttg 34461615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 184 - 298
Target Start/End: Original strand, 32661310 - 32661424
Alignment:
Q  184 aaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaattttcaat 283  Q
    ||||||||| | ||| |||| || ||||||||||||||       || ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  32661310 aaaatgaatgttactctacattttcaatacaactttaatttttttctcccaactttaccctcaataaatactctaacttttctctcacacaattttcaat 32661409  T
Q  284 gcaactttaagtttg 298  Q
     ||||||||||||||    
T  32661410 acaactttaagtttg 32661424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 137 - 290
Target Start/End: Original strand, 42946082 - 42946233
Alignment:
Q  137 ccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaac 236  Q
    ||||||||||||||| |||| |||| ||||||| |  || |||||||||||||||| ||| |||||| ||  |||||||||||||       ||| |||     
T  42946082 ccattttaaaatgagtgtcactttaacaaaaaaaa--aagttgttttaaaatgaatgtcattttacatttttaatacaactttaatttttttctttcaat 42946179  T
Q  237 tttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactt 290  Q
    |||||||||||||||||||| || ||||||||||||||||||| ||||||||||    
T  42946180 tttaccctcaataaatactctaatttttctctcacacaatttttaatgcaactt 42946233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 184 - 371
Target Start/End: Complemental strand, 32326873 - 32326685
Alignment:
Q  184 aaaatgaatttcactttacaattccaatacaactttaannnnnnnc-ttccaactttaccctcaataaatactccaacttttctctcacacaattttcaa 282  Q
    ||||| ||| |||||||||| || ||||||||||||||       | || ||| ||||||| |||||||||||||||||||| |||||||||||||||||    
T  32326873 aaaataaatgtcactttacattttcaatacaactttaatttttttcctttcaattttacccacaataaatactccaacttttttctcacacaattttcaa 32326774  T
Q  283 tgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaat 371  Q
    ||||||||||| ||||       | ||||||   ||||||||||||||||| |||||  | |||| ||||||| |||||||| ||||||    
T  32326773 tgcaactttaaatttgtctttttcatataaaacaagggcagtttagtaaaagtgttacgtctaatgattatttcatttcattccttaat 32326685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 173 - 371
Target Start/End: Original strand, 36915361 - 36915557
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||||||||| ||||||||| |||||||||| || ||||||||||||||       |||||||||||||| |||||||||| || |  |||| |||  ||    
T  36915361 aaaattgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccttcaataaatattcaacattttttct--ca 36915458  T
Q  273 caattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaat 371  Q
    ||||||||||||||||||||||||||       | ||||||   |||||| |||||||||||| |||| | |||| ||||||| ||| |||| ||||||    
T  36915459 caattttcaatgcaactttaagtttgtctttttcatataaaacaagggcaatttagtaaaaatattatgtctaatgattatttcattccattccttaat 36915557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 184 - 298
Target Start/End: Complemental strand, 34168353 - 34168245
Alignment:
Q  184 aaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaattttcaat 283  Q
    ||||||||| |||||||||| || ||||||||||||||       ||||||||||||||||||| ||||||||      |||||||||||||||||||||    
T  34168353 aaaatgaatgtcactttacattttcaatacaactttaacttttttcttccaactttaccctcaagaaatactc------ttctctcacacaattttcaat 34168260  T
Q  284 gcaactttaagtttg 298  Q
    |||||||||||||||    
T  34168259 gcaactttaagtttg 34168245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 153 - 298
Target Start/End: Original strand, 39970300 - 39970444
Alignment:
Q  153 gtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaat 252  Q
    |||| |||||||||||| | |||||||||| ||||||||| | |||||||| |||||||||||| |||        || ||||||||||||||| ||| |    
T  39970300 gtcactttagcaaaaaaaa-aaaattgtttcaaaatgaatgttactttacatttccaatacaacatta-gttttttctcccaactttaccctcactaatt 39970397  T
Q  253 -actccaacttttctctcacacaattttcaatgcaactttaagtttg 298  Q
     |||| |||||||||||| ||||||||||||||||||||||||||||    
T  39970398 tactcaaacttttctctcgcacaattttcaatgcaactttaagtttg 39970444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 173 - 298
Target Start/End: Original strand, 27416495 - 27416622
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttt----tctct 268  Q
    |||||| ||| ||||||||| |||||||||| ||||||||||||||||        | |||||||||||||||||||||||||||||||||    ||||     
T  27416495 aaaattatttcaaaatgaatgtcactttacatttccaatacaacttta--gtttttcgtccaactttaccctcaataaatactccaacttttttctctca 27416592  T
Q  269 cacacaattttcaatgcaactttaagtttg 298  Q
    ||||||||||||||||||| | ||||||||    
T  27416593 cacacaattttcaatgcaattctaagtttg 27416622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 135 - 293
Target Start/End: Original strand, 35052431 - 35052587
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttcca 234  Q
    |||| ||| |||||||| |||  ||||||||||||    ||||||||||||||||||| ||  |||||| |||||||||||||||||       ||| ||    
T  35052431 ctccgtttcaaaatgagtgtcgctttagcaaaaaa----aaattgttttaaaatgaatgtcgttttacatttccaatacaactttaatttttttctttca 35052526  T
Q  235 actttaccctcaataaatactccaacttt--tctctcacacaattttcaatgcaactttaa 293  Q
    ||||| || ||||||||||||| || |||  ||||||||| ||||||||||||||||||||    
T  35052527 actttcccttcaataaatactcaaaattttctctctcacataattttcaatgcaactttaa 35052587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 180 - 298
Target Start/End: Complemental strand, 18673251 - 18673131
Alignment:
Q  180 ttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttc--tctcacacaatt 277  Q
    ||||||||||||| || ||||||| || |||| | |||||||       |||||||||||||| | ||||||||||||||||||||  ||||||||||||    
T  18673251 ttttaaaatgaatgtcgctttacattttcaatgcgactttaatttttttcttccaactttacctttaataaatactccaacttttctctctcacacaatt 18673152  T
Q  278 ttcaatgcaactttaagtttg 298  Q
    |||||| ||| ||||||||||    
T  18673151 ttcaatacaattttaagtttg 18673131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 255 - 371
Target Start/End: Original strand, 6839283 - 6839399
Alignment:
Q  255 tccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattatt 354  Q
    |||||||||||||||||| |||||||||||||| |||| |||||       |||||||||| | |||| |||||||||| |||||| | |||| ||||||    
T  6839283 tccaacttttctctcacataattttcaatgcaattttatgtttgtctttttcttataaagtaaaggcaatttagtaaaagtgttatgtctaatgattatt 6839382  T
Q  355 ttatttcatttcttaat 371  Q
    | ||| ||||| |||||    
T  6839383 tcattccattttttaat 6839399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 601 - 651
Target Start/End: Complemental strand, 13891218 - 13891168
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  13891218 gtcttagatgaagtggtaaaccactgaaaataaactcacacacaactgtga 13891168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 257 - 371
Target Start/End: Original strand, 2067778 - 2067892
Alignment:
Q  257 caacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattatttt 356  Q
    ||||||||| ||||||||||||| ||||||||||||| || |       |||||||||| ||||||||||| |||||  |||||||  ||| |||||||     
T  2067778 caacttttcactcacacaatttttaatgcaactttaatttggtcttttccttataaagtaagggcagtttaataaaagcgttatatcaaatgattatttc 2067877  T
Q  357 atttcatttcttaat 371  Q
    ||| |||||||||||    
T  2067878 attccatttcttaat 2067892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 229 - 298
Target Start/End: Complemental strand, 5044329 - 5044260
Alignment:
Q  229 cttccaactttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttg 298  Q
    ||||||||||||  ||||||||||||| |||||||||| |||||||||||| ||| ||||||||| ||||    
T  5044329 cttccaactttattctcaataaatacttcaacttttctatcacacaatttttaatacaactttaaatttg 5044260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 257 - 371
Target Start/End: Complemental strand, 38329128 - 38329015
Alignment:
Q  257 caacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattatttt 356  Q
    ||||||| | ||||||||||||||||||||||||||||||||        ||||||||| | ||||||||||||||| |||||| | |||| |||||||     
T  38329128 caactttaccctcacacaattttcaatgcaactttaagtttgtcttttgattataaagt-aaggcagtttagtaaaagtgttatgtctaatgattatttc 38329030  T
Q  357 atttcatttcttaat 371  Q
    ||| |||| ||||||    
T  38329029 attccattccttaat 38329015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 43938186 - 43938239
Alignment:
Q  244 tcaataaatactccaacttttctctcacacaattttcaatgcaactttaagttt 297  Q
    |||||||||||||||||||||||||| |||| |||| |||||||||||||||||    
T  43938186 tcaataaatactccaacttttctctcgcacactttttaatgcaactttaagttt 43938239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 258 - 298
Target Start/End: Original strand, 26439045 - 26439085
Alignment:
Q  258 aacttttctctcacacaattttcaatgcaactttaagtttg 298  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  26439045 aacttttctctcacacaattttcaatgcaactttaagtttg 26439085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 144 - 293
Target Start/End: Complemental strand, 29931414 - 29931279
Alignment:
Q  144 aaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccc 243  Q
    |||||||| |||| ||||||||||||     |||||||||||||| ||| |||||||||| |||||||||||||||||       |||| |||||||| |    
T  29931414 aaaatgagtgtcactttagcaaaaaa-----aattgttttaaaataaatatcactttacatttccaatacaactttaatttttttcttctaactttactc 29931320  T
Q  244 tcaataaatactccaacttttctctcacacaattttcaatgcaactttaa 293  Q
    |         ||| ||||||||||||||| ||||||||||||||||||||    
T  29931319 t---------ctcaaacttttctctcacataattttcaatgcaactttaa 29931279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 1339 - 1390
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  1339 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 1390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 1078647 - 1078698
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  1078647 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 1078698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 6602517 - 6602568
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  6602517 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 6602568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 6677970 - 6678021
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  6677970 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 6678021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Complemental strand, 28817385 - 28817334
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  28817385 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 28817334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Complemental strand, 32333243 - 32333192
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  32333243 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 32333192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 35779496 - 35779547
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  35779496 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 35779547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 42192638 - 42192689
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  42192638 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 42192689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Complemental strand, 42885303 - 42885252
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  42885303 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 42885252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 601 - 651
Target Start/End: Original strand, 70523 - 70573
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  70523 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 70573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 255 - 342
Target Start/End: Complemental strand, 18666621 - 18666534
Alignment:
Q  255 tccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatat 342  Q
    ||||||||||||||||||||||||| ||||||||||||   |||       |||||||||| ||| ||||||||||||| ||||||||    
T  18666621 tccaacttttctctcacacaatttttaatgcaactttagtgttgtctttttcttataaagtaaggacagtttagtaaaagtgttatat 18666534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 601 - 651
Target Start/End: Original strand, 31695269 - 31695319
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||| |||||    
T  31695269 gtcttagatgaagtggtaaaccattgaaattaaactcacacacaattgtga 31695319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 602 - 651
Target Start/End: Complemental strand, 9292145 - 9292096
Alignment:
Q  602 tcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  9292145 tcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 9292096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 257 - 298
Target Start/End: Complemental strand, 11336107 - 11336066
Alignment:
Q  257 caacttttctctcacacaattttcaatgcaactttaagtttg 298  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  11336107 caacttttctctcacacaattttcaatgcaactttaattttg 11336066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 257 - 298
Target Start/End: Original strand, 16209019 - 16209060
Alignment:
Q  257 caacttttctctcacacaattttcaatgcaactttaagtttg 298  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  16209019 caacttttctctcacataattttcaatgcaactttaagtttg 16209060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 602 - 651
Target Start/End: Complemental strand, 20269657 - 20269608
Alignment:
Q  602 tcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||| |||| |||||| |||||||||||||||||||||||||||||||    
T  20269657 tcttagatgaaatggtaatccattgaaaataaactcacacacaactgtga 20269608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 602 - 651
Target Start/End: Complemental strand, 21056286 - 21056237
Alignment:
Q  602 tcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||| |||| |||||| |||||||||||||||||||||||||||||||    
T  21056286 tcttagatgaaatggtaatccattgaaaataaactcacacacaactgtga 21056237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 1774247 - 1774170
Alignment:
Q  140 ttttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaa 221  Q
    |||||||||||| |||| |||||| |||||    ||||||||||||||||||| ||| |||||| || ||||||||||||||    
T  1774247 ttttaaaatgagtgtcactttagccaaaaa----aaattgttttaaaatgaatgtcaatttacattttcaatacaactttaa 1774170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 255 - 364
Target Start/End: Original strand, 7129353 - 7129462
Alignment:
Q  255 tccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattatt 354  Q
    |||||||||||||||||||||||| |||||||||||||| ||||       |||||||||| |   |||||||||||||  |||||||  ||| |||||     
T  7129353 tccaacttttctctcacacaatttccaatgcaactttaattttgtcttattcttataaagtaaaatcagtttagtaaaagcgttatattcaatgattata 7129452  T
Q  355 ttatttcatt 364  Q
     |||||||||    
T  7129453 ctatttcatt 7129462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 229 - 298
Target Start/End: Original strand, 13109037 - 13109108
Alignment:
Q  229 cttccaactttaccctcaataaatactccaacttt--tctctcacacaattttcaatgcaactttaagtttg 298  Q
    ||||||||| || ||| ||||||||||||||||||  |||||||||||||||| ||||||| ||||| ||||    
T  13109037 cttccaactctatccttaataaatactccaacttttctctctcacacaatttttaatgcaaatttaaatttg 13109108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 4530981 - 4531032
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||||||| ||||| |||||||||||||| ||||||    
T  4530981 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacagctgtga 4531032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 600 - 651
Target Start/End: Complemental strand, 7792790 - 7792739
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| |||||| |||| ||| |||||||||||||||||||||||||||    
T  7792790 ggtcttagatgaagtagtaatccactgaaaataaactcacacacaactgtga 7792739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 604 - 651
Target Start/End: Complemental strand, 7813447 - 7813400
Alignment:
Q  604 ttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  7813447 ttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 7813400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 11336196 - 11336122
Alignment:
Q  140 ttttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaact 217  Q
    |||||||||||| ||||||||||  |||||   |||||||||||||||||||| ||| |||||| || ||||||||||    
T  11336196 ttttaaaatgagtgtcattttaggtaaaaa---aaaattgttttaaaatgaatatcattttacattttcaatacaact 11336122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 257 - 373
Target Start/End: Original strand, 41414911 - 41415026
Alignment:
Q  257 caacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattatttt 356  Q
    |||||||| ||||||||||||||||||||||||||||| ||         ||||||| | ||||||| ||||||||| |||||  | |||| |||||||     
T  41414911 caacttttttctcacacaattttcaatgcaactttaagcttattatttttttataaaataagggcag-ttagtaaaagtgttacgtctaatgattatttc 41415009  T
Q  357 atttcatttcttaatat 373  Q
    |||||||| ||||||||    
T  41415010 atttcattccttaatat 41415026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 298
Target Start/End: Original strand, 8471344 - 8471378
Alignment:
Q  264 tctctcacacaattttcaatgcaactttaagtttg 298  Q
    |||||||||||||||||||||||||||||||||||    
T  8471344 tctctcacacaattttcaatgcaactttaagtttg 8471378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 297
Target Start/End: Original strand, 32271503 - 32271628
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaactttt--ctctca 270  Q
    |||||||||||||||||||| ||  |||||| || ||||  || |||||       ||||||| ||||| || |||||||||| ||||||||  ||||||    
T  32271503 aaaattgttttaaaatgaatatctttttacattttcaatgtaattttaatttttttcttccaattttacgct-aataaatacttcaacttttatctctca 32271601  T
Q  271 cacaattttcaatgcaactttaagttt 297  Q
    || |||||||||||||| |||||||||    
T  32271602 cataattttcaatgcaattttaagttt 32271628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 298
Target Start/End: Complemental strand, 37185734 - 37185684
Alignment:
Q  248 taaatactccaacttttctctcacacaattttcaatgcaactttaagtttg 298  Q
    ||||||||||||||||||||||  | | |||||||||||||||||||||||    
T  37185734 taaatactccaacttttctctcgtatatttttcaatgcaactttaagtttg 37185684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 257 - 298
Target Start/End: Complemental strand, 41790215 - 41790174
Alignment:
Q  257 caacttttctctcacacaattttcaatgcaactttaagtttg 298  Q
    ||||||||||||||||||||||||||| ||||||||| ||||    
T  41790215 caacttttctctcacacaattttcaatccaactttaaatttg 41790174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 254 - 298
Target Start/End: Complemental strand, 2803323 - 2803279
Alignment:
Q  254 ctccaacttttctctcacacaattttcaatgcaactttaagtttg 298  Q
    |||||||||||||||  ||||||||||||| ||||||||||||||    
T  2803323 ctccaacttttctcttgcacaattttcaattcaactttaagtttg 2803279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 298
Target Start/End: Original strand, 156309 - 156348
Alignment:
Q  259 acttttctctcacacaattttcaatgcaactttaagtttg 298  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  156309 acttttctctcgcacaattttcaatacaactttaagtttg 156348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 604 - 651
Target Start/End: Original strand, 31532128 - 31532175
Alignment:
Q  604 ttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||| ||||||||||| ||| ||||| |||||||||||||||||||||    
T  31532128 ttagatgaagtggtaatccactgaaattaaactcacacacaactgtga 31532175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 609 - 651
Target Start/End: Complemental strand, 5385458 - 5385416
Alignment:
Q  609 tgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||||||| || ||||| |||||||||||||||||||||    
T  5385458 tgaagtggtaaatcactgaaattaaactcacacacaactgtga 5385416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 600 - 642
Target Start/End: Original strand, 10963241 - 10963283
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacaca 642  Q
    |||||||| ||||||||||| ||| ||||||||||||||||||    
T  10963241 ggtcttagatgaagtggtaatccactgaaaataaactcacaca 10963283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 647
Target Start/End: Original strand, 31969720 - 31969766
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaact 647  Q
    ||||||| ||||||||||||||| ||||| |||| ||||||||||||    
T  31969720 gtcttagatgaagtggtaaaccactgaaattaaattcacacacaact 31969766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 322 - 408
Target Start/End: Complemental strand, 32061468 - 32061382
Alignment:
Q  322 agtttagtaaaaatgttatatgtaataattattttatttcatttcttaatatgcgtgtcaaactcttaaacgacacttattgtgaaa 408  Q
    |||||||||||| |||||| | | || |||||||  ||  ||||||||||||| ||| ||||  ||||||||||||| |||||||||    
T  32061468 agtttagtaaaagtgttatgtctgatgattatttcgttcaatttcttaatatgtgtgccaaaaacttaaacgacactcattgtgaaa 32061382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 651
Target Start/End: Original strand, 42364702 - 42364752
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| | ||||||||||| | ||||| |||||||||||||||||||||    
T  42364702 gtcttagataaagtggtaaactactgaaattaaactcacacacaactgtga 42364752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 254 - 298
Target Start/End: Complemental strand, 8107246 - 8107202
Alignment:
Q  254 ctccaacttttctctcacacaattttcaatgcaactttaagtttg 298  Q
    ||||||||||||||||| ||||||||||||  |||||||| ||||    
T  8107246 ctccaacttttctctcagacaattttcaatagaactttaaatttg 8107202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 14234405 - 14234350
Alignment:
Q  140 ttttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcacttt 200  Q
    |||||||||||| ||| |||||||||||||     |||||||||||||||||| |||||||    
T  14234405 ttttaaaatgagtgtcgttttagcaaaaaa-----aattgttttaaaatgaatgtcacttt 14234350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 17920916 - 17920977
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcacttt 200  Q
    |||| |||||||||||  ||| |||||||||||||    ||||||||||||||||||| |||||||    
T  17920916 ctccgttttaaaatgaatgtcgttttagcaaaaaa----aaattgttttaaaatgaatgtcacttt 17920977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 601 - 645
Target Start/End: Complemental strand, 29425479 - 29425435
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaa 645  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||||    
T  29425479 gtcttagatgaagtggtaatccactgaaattaaactcacacacaa 29425435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 32061582 - 32061534
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaa 221  Q
    |||||||||||||||||||| |||||||||| || | |||||| |||||    
T  32061582 aaaattgttttaaaatgaatgtcactttacattttctatacaaatttaa 32061534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 233 - 297
Target Start/End: Original strand, 32737820 - 32737883
Alignment:
Q  233 caactttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagttt 297  Q
    ||||||||  || ||||||||| ||||||||||| ||| | |||||||||||||| |||||||||    
T  32737820 caactttattcttaataaatacgccaacttttctttcatataattttcaatgcaa-tttaagttt 32737883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 38329184 - 38329140
Alignment:
Q  177 ttgttttaaaatgaatttcactttacaattccaatacaactttaa 221  Q
    |||||||||||||||| |||||||| | || ||||||||||||||    
T  38329184 ttgttttaaaatgaatgtcactttatattttcaatacaactttaa 38329140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 6e-45; HSPs: 73)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 177 - 383
Target Start/End: Complemental strand, 41906088 - 41905883
Alignment:
Q  177 ttgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaat 276  Q
    |||||||||||| ||| |||||||||| ||| |||||||||||||       |||||||||||||| ||||||||||||||||||||||||| |||||||    
T  41906088 ttgttttaaaataaatgtcactttacatttctaatacaactttaagttttctcttccaactttacc-tcaataaatactccaacttttctcttacacaat 41905990  T
Q  277 tttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaatatgcg 376  Q
    ||||||||||||||||| ||||       |||||||||| |||||||||||||||||  |||||||  ||| ||||||| | ||||||||||||| || |    
T  41905989 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttagtaaaagcgttatatccaatgattatttcagttcatttcttaatctgtg 41905890  T
Q  377 tgtcaaa 383  Q
    |||||||    
T  41905889 tgtcaaa 41905883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 177 - 408
Target Start/End: Original strand, 1103483 - 1103710
Alignment:
Q  177 ttgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaat 276  Q
    |||||| ||||||||| ||| |||||| |||||||||||||||||       ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1103483 ttgtttcaaaatgaatgtcattttacatttccaatacaactttaattgttttcttccaactttaccctcaataaatacttcaacttttctctcacacaat 1103582  T
Q  277 tttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaatatgcg 376  Q
    |||||||| |||||||| ||||        ||||||||| |||| ||||||||||||||||| | | |  | ||||||| |||| |||||||||| ||      
T  1103583 tttcaatgtaactttaaatttgttttttttttataaagtaagggtagtttagtaaaaatgttttgtctggtgattatttcattttatttcttaatctgta 1103682  T
Q  377 tgtcaaactcttaaacgacacttattgtgaaa 408  Q
    |||||||    |||||||||||||||||||||    
T  1103683 tgtcaaa----taaacgacacttattgtgaaa 1103710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 187 - 383
Target Start/End: Complemental strand, 34002277 - 34002080
Alignment:
Q  187 atgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaattttcaatgca 286  Q
    |||||| |||||||||| ||||||||||| |||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34002277 atgaatgtcactttacatttccaatacaagtttaattttattcttccaactttaccctcaataaatactccaacttttctctcacacaattttcaatgca 34002178  T
Q  287 actttaagtttgnnnnnnncttataaagt-gagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaatatgcgtgtcaaa 383  Q
    ||||||| ||||       ||||||||||  || ||||||||| |||  ||||||||  ||| ||||||| ||||||||||||||| || ||||||||    
T  34002177 actttaattttgtctttttcttataaagtaaagtgcagtttagcaaaggtgttatatccaatgattatttcatttcatttcttaatctgtgtgtcaaa 34002080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 173 - 417
Target Start/End: Complemental strand, 3681081 - 3680838
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||||||||||||||||||| |||||||||| || ||||||||||||||       |||||||||||||| | ||||||||| | |||||||||||||||    
T  3681081 aaaattgttttaaaatgaatgtcactttacattttcaatacaactttaattttgttcttccaactttaccattaataaatacactaacttttctctcaca 3680982  T
Q  273 caattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaata 372  Q
     |||||| ||||||||||||| ||||       |||||||||| || |||||||||||||| | |||| | |||| ||||||| ||| ||||| |||||     
T  3680981 gaattttaaatgcaactttaaatttgtctttttcttataaagtaagagcagtttagtaaaagttttatgtctaatgattatttcattccattttttaatc 3680882  T
Q  373 tgcgtgtcaaactcttaaacgacacttattgtgaaatagagggag 417  Q
    || || || |  |||||||||||||||||||| |||  |||||||    
T  3680881 tgtgtttc-atttcttaaacgacacttattgtaaaacggagggag 3680838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 135 - 371
Target Start/End: Original strand, 17869198 - 17869430
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttcca 234  Q
    |||| |||||||||||| |||| |||||| ||||| ||    |||||| ||||||||| ||| |||||| ||||||| |||||||||       ||||||    
T  17869198 ctccgttttaaaatgagtgtcactttagcgaaaaaaat----ttgtttcaaaatgaatgtcattttacatttccaatgcaactttaattttttccttcca 17869293  T
Q  235 actttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaa 334  Q
    |||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||       |||||||||| | | || |||| |||||     
T  17869294 actttatcctcaataaatactcaatcttttctctcacacaattttcaatgcaactttaagtttgtatttttcttataaagtaaagacaatttaataaaag 17869393  T
Q  335 tgttatatgtaataattattttatttcatttcttaat 371  Q
    |||||| | |||| ||||||| |||||||| ||||||    
T  17869394 tgttatgtctaatgattatttcatttcattccttaat 17869430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 135 - 298
Target Start/End: Original strand, 40298808 - 40298967
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttcca 234  Q
    |||| ||| |||||||| |||| |||||| |||||    ||||||||| ||||||||| |||||||||| || ||||||||||||||       || |||    
T  40298808 ctccgtttcaaaatgagtgtcactttagccaaaaa----aaattgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttctccca 40298903  T
Q  235 actttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttg 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  40298904 actttaccctcaataaatactccaacttttctctcacacaattttcaatgtaactttaagtttg 40298967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 173 - 298
Target Start/End: Original strand, 19906409 - 19906534
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||||||||| ||||||||| || ||||||| ||||||||||||||| |       ||||||||||||||||||||||||| ||||||||||||||| ||    
T  19906409 aaaattgtttcaaaatgaatgtcgctttacatttccaatacaacttttatttttttcttccaactttaccctcaataaatattccaacttttctctctca 19906508  T
Q  273 caattttcaatgcaactttaagtttg 298  Q
    ||||||||||||||||||||||||||    
T  19906509 caattttcaatgcaactttaagtttg 19906534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 173 - 364
Target Start/End: Complemental strand, 42259706 - 42259516
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||||||||||||||||||| | | |||||  || ||||||||||||||       |||||||||||||||||||||||||||| ||||||| |||||||    
T  42259706 aaaattgttttaaaatgaatgttattttacgttttcaatacaactttaatttttt-cttccaactttaccctcaataaatactcaaacttttgtctcaca 42259608  T
Q  273 caattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatt 364  Q
     ||||||||||||||||||||| |||       |||||||||| |||||| |||||||||| |||||| | |||||||||| | ||||||||    
T  42259607 taattttcaatgcaactttaagcttgtctttttcttataaagtaagggcattttagtaaaagtgttatgtctaataattatctcatttcatt 42259516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 19920430 - 19920310
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||||| ||||||||||||| |||||||||| |||||||||||||||||       ||  |||||||||||||||||||||||| |||||||||||| ||    
T  19920430 aaaattattttaaaatgaatgtcactttacatttccaatacaactttaatttttttctctcaactttaccctcaataaatactcaaacttttctctcgca 19920331  T
Q  273 caattttcaatgcaactttaa 293  Q
    |||||||||||||||||||||    
T  19920330 caattttcaatgcaactttaa 19920310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 173 - 298
Target Start/End: Complemental strand, 31416910 - 31416783
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttt--tctctca 270  Q
    |||||||||||||||||||| |||||||||| || ||||||||||||||       ||||||||||||||||||||||||||| ||| |||  |||||||    
T  31416910 aaaattgttttaaaatgaatatcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatacttcaatttttctctctca 31416811  T
Q  271 cacaattttcaatgcaactttaagtttg 298  Q
    ||||||||||||||||||||||| ||||    
T  31416810 cacaattttcaatgcaactttaaatttg 31416783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 173 - 371
Target Start/End: Complemental strand, 28044290 - 28044101
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||||||||||||||||||| |||||||||| || ||||||||||||||       |||||||||||| ||||         ||||| ||||||||||||    
T  28044290 aaaattgttttaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttatcctc---------tccaatttttctctcaca 28044200  T
Q  273 caattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaat 371  Q
    ||||||||||| ||||||||| ||||       |||||||||| |||||||||||||||||| |||||||  ||| ||||||| |||| ||||||||||    
T  28044199 caattttcaatacaactttaattttgtctttttcttataaagtaagggcagtttagtaaaaacgttatatccaatgattatttcattttatttcttaat 28044101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 229 - 417
Target Start/End: Original strand, 34733362 - 34733547
Alignment:
Q  229 cttccaactttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttag 328  Q
    ||||||||| | || |||||||||||||||| ||||||||||||  ||||||||||||||||||||||||       |||||||||| |||| |||||||    
T  34733362 cttccaactctcccttcaataaatactccaatttttctctcaca--attttcaatgcaactttaagtttgtctttttcttataaagtaagggtagtttag 34733459  T
Q  329 taaaaatgttatatgtaataattattttatttcatttcttaatatgcgtgtcaaactcttaaacgacacttattgtgaaatagagggag 417  Q
    ||||| |||||| | |||| ||||||| ||||||||||||| | || ||   |||| ||||||| ||||| |||||||||| |||||||    
T  34733460 taaaagtgttatgtctaatgattatttcatttcatttcttattttgtgtcaaaaac-cttaaacaacactcattgtgaaatggagggag 34733547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 173 - 298
Target Start/End: Original strand, 5722998 - 5723122
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    ||||||| || ||||||||| |||||||||| || ||||||||||||||       || | ||||||||||||||||||||||| |||||||||||||||    
T  5722998 aaaattgcttcaaaatgaatgtcactttacattttcaatacaactttaatttttt-ctcctaactttaccctcaataaatactcaaacttttctctcaca 5723096  T
Q  273 caattttcaatgcaactttaagtttg 298  Q
    ||||||||||||||||||||||||||    
T  5723097 caattttcaatgcaactttaagtttg 5723122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 144 - 340
Target Start/End: Complemental strand, 32346020 - 32345825
Alignment:
Q  144 aaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccc 243  Q
    |||||||| ||| ||||||| |||||   ||| |||||| ||||||||| || ||||||| || |||| |||||||||       |||||||||||||||    
T  32346020 aaaatgagtgtcgttttagccaaaaa---aaatttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaatttttttcttccaactttaccc 32345924  T
Q  244 tcaataaatactccaacttttc--tctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttat 340  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||       |||||||||| |||  | |||||||||| ||||||    
T  32345923 tcaataaatactccaacttttctctctcacacaattttcaatacaactttaagtttgtatttttcttataaagtaaggttattttagtaaaattgttat 32345825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 173 - 294
Target Start/End: Complemental strand, 42044138 - 42044015
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttc--tctca 270  Q
    |||||| ||| ||||| ||| |||||||||| || ||||||||||||||       |||||||||||||||||||||||||||||||||||||  |||||    
T  42044138 aaaattatttcaaaattaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctctca 42044039  T
Q  271 cacaattttcaatgcaactttaag 294  Q
    ||||||||||||||||||||||||    
T  42044038 cacaattttcaatgcaactttaag 42044015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 173 - 374
Target Start/End: Original strand, 32275199 - 32275391
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||||||||| |||||||||  ||||||||| ||| |||||||||||||       |||||||||||||||||         || ||||||||  |||||    
T  32275199 aaaattgtttcaaaatgaatgccactttacatttctaatacaactttaatttttttcttccaactttaccctc---------tcaaacttttccttcaca 32275289  T
Q  273 caattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaata 372  Q
    ||||||||||||||||||||||||||       |||||||||| | |||||||||||||||| || || | |||| ||||||| ||||||||||||||||    
T  32275290 caattttcaatgcaactttaagtttgattttttcttataaagtaaaggcagtttagtaaaaacgtcatgtttaatgattatttcatttcatttcttaata 32275389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 255 - 409
Target Start/End: Complemental strand, 42010651 - 42010497
Alignment:
Q  255 tccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattatt 354  Q
    |||||||||||||||| ||||||||||||| |||||||||||||       |||||||| | ||||||||||||||||||| |||| | |||| |||||     
T  42010651 tccaacttttctctcatacaattttcaatgtaactttaagtttgtctttttcttataaaataagggcagtttagtaaaaatattatgtctaatgattatc 42010552  T
Q  355 ttatttcatttcttaatatgcgtgtcaaactcttaaacgacacttattgtgaaat 409  Q
    |||||  |||| || |||||  ||||||| | |||||||||||| ||||||||||    
T  42010551 ttattctatttattgatatgtatgtcaaaattttaaacgacactcattgtgaaat 42010497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 173 - 340
Target Start/End: Original strand, 26963474 - 26963643
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttt--tctctca 270  Q
    |||||||||| ||||| ||| ||  |||||| ||||||| |||||||||       |||||||||||||||||||| ||||||||||||||  |||||||    
T  26963474 aaaattgtttcaaaataaatgtctatttacatttccaatgcaactttaatttttttcttccaactttaccctcaatgaatactccaacttttctctctca 26963573  T
Q  271 cacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttat 340  Q
    || |||||||||||||||||||||||||       |||||||||| |||  | |||||||||| ||||||    
T  26963574 cataattttcaatgcaactttaagtttgtctttttcttataaagtaaggttattttagtaaaattgttat 26963643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 173 - 298
Target Start/End: Original strand, 30514968 - 30515095
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaac--ttttctctca 270  Q
    |||||||||| ||||||||| ||| |||||| |||||||||||||||||       |||||||||||||| |||||||||||||||||  ||||||||||    
T  30514968 aaaattgtttcaaaatgaatgtcaatttacatttccaatacaactttaatttttttcttccaactttaccttcaataaatactccaacttttttctctca 30515067  T
Q  271 cacaattttcaatgcaactttaagtttg 298  Q
     |||||||| ||| ||||||||| ||||    
T  30515068 gacaattttaaatacaactttaaatttg 30515095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 173 - 294
Target Start/End: Complemental strand, 36447229 - 36447106
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttc--tctca 270  Q
    |||||||||| ||||||||| ||| |||||| || |||||||| |||||       |||||||||||| ||||| ||||||||||||||||||  |||||    
T  36447229 aaaattgtttcaaaatgaatgtcattttacattttcaatacaattttaatttttctcttccaactttatcctcattaaatactccaacttttctctctca 36447130  T
Q  271 cacaattttcaatgcaactttaag 294  Q
    ||||||||||||||||||||||||    
T  36447129 cacaattttcaatgcaactttaag 36447106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 255 - 369
Target Start/End: Original strand, 18886722 - 18886836
Alignment:
Q  255 tccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattatt 354  Q
    |||||||||||| |||||||||||||||||||||||||| ||||       |||||||||| |||||||||||||||||  ||||||| |||| ||||||    
T  18886722 tccaacttttctttcacacaattttcaatgcaactttaattttgtcttttccttataaagtaagggcagtttagtaaaagcgttatatctaatgattatt 18886821  T
Q  355 ttatttcatttctta 369  Q
    | ||| |||||||||    
T  18886822 tcattccatttctta 18886836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 140 - 298
Target Start/End: Complemental strand, 30833280 - 30833127
Alignment:
Q  140 ttttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaacttt 239  Q
    |||||||||||| |||  ||||||||||||     |||| ||||||||||||| ||| |||||| || |||||||||||| |       ||| |||||||    
T  30833280 ttttaaaatgagtgtcgctttagcaaaaaa-----aattattttaaaatgaatatcattttacattttcaatacaacttttatttttttctttcaacttt 30833186  T
Q  240 accctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttg 298  Q
    ||| ||||||||||||||||||||| |||||||||||||||| || |||| ||||||||    
T  30833185 accttcaataaatactccaacttttttctcacacaattttcagtgtaactctaagtttg 30833127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 173 - 298
Target Start/End: Original strand, 18733448 - 18733575
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnn--cttccaactttaccctcaataaatactccaacttttctctca 270  Q
    |||||||||| ||||||||| |||||||||| || ||||||||||||||         |||| |||| ||||||||||||||||||||| |||| |||||    
T  18733448 aaaattgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttttcttcgaactctaccctcaataaatactccaatttttttctca 18733547  T
Q  271 cacaattttcaatgcaactttaagtttg 298  Q
    ||||| ||||||||||||||||| ||||    
T  18733548 cacaactttcaatgcaactttaaatttg 18733575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 184 - 340
Target Start/End: Complemental strand, 39117636 - 39117479
Alignment:
Q  184 aaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttt-tctctcacacaattttcaa 282  Q
    ||||||||| ||  |||||| || ||||||||||||||       |||||||| ||||||||||| |||||||||| ||| |||||||||||||||||||    
T  39117636 aaaatgaatgtcgttttacattttcaatacaactttaattattttcttccaacattaccctcaatgaatactccaattttctctctcacacaattttcaa 39117537  T
Q  283 tgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttat 340  Q
    ||||||||||||||||       |||||||||| |||  | |||||||||| ||||||    
T  39117536 tgcaactttaagtttgtcttattcttataaagtaaggttattttagtaaaattgttat 39117479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 232 - 298
Target Start/End: Complemental strand, 33845509 - 33845443
Alignment:
Q  232 ccaactttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttg 298  Q
    ||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||    
T  33845509 ccaactttaccctcaataattactccaacttttttctcgcacaattttcaatgcaactttaagtttg 33845443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 184 - 371
Target Start/End: Complemental strand, 22627494 - 22627314
Alignment:
Q  184 aaaatgaatttcactttacaattccaatacaactttaa--nnnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaattttca 281  Q
    ||||||||| |||||||||| |||||||||||||||||         ||||||||||||||||         ||||||||||||||||||||||||||||    
T  22627494 aaaatgaatgtcactttacatttccaatacaactttaatttttttttcttccaactttaccct---------ctccaacttttctctcacacaattttca 22627404  T
Q  282 atgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaat 371  Q
    |||||||||||||||||        ||||||||| | ||||||||||||||  |||||| | |||  ||||||| |||||||| ||||||    
T  22627403 atgcaactttaagtttgtcttatttttataaagtaaaggcagtttagtaaatgtgttatgtttaacgattatttcatttcattccttaat 22627314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 173 - 371
Target Start/End: Complemental strand, 26527555 - 26527358
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||||| ||||||||||||| | | |||||| || ||||||||||||||       |||| ||||||| ||||||||||||||||||||||||| | | |    
T  26527555 aaaattattttaaaatgaatgttattttacattttcaatacaactttaatttttttcttctaactttaacctcaataaatactccaacttttctgttaaa 26527456  T
Q  273 caattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaat 371  Q
     |||||||||||||||||||| |||        |||||||||| |  |||||||||||||  |||||| | |||| ||||||  ||| |||||||||||    
T  26527455 taattttcaatgcaactttaaattt-tttttttcttataaagtaaaagcagtttagtaaaggtgttatgtctaatgattattgcattccatttcttaat 26527358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 135 - 371
Target Start/End: Original strand, 42121511 - 42121735
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaa-nnnnnnncttcc 233  Q
    |||| |||||||||||  |||| ||||||||||||    ||||||||| ||||||||| |||||||| | |||||||||||||||||        |||||    
T  42121511 ctccgttttaaaatgaatgtcactttagcaaaaaa----aaattgtttcaaaatgaatgtcactttatatttccaatacaactttaattttttttcttcc 42121606  T
Q  234 aactttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaa 333  Q
    |||||||| ||         ||||||||||||||||| |||||||||||||||||||||||| |        || ||||||| ||| |||||||||||||    
T  42121607 aactttactct---------ctccaacttttctctcaaacaattttcaatgcaactttaagtgtatctttttctaataaagtaaggtcagtttagtaaaa 42121697  T
Q  334 atgttatatgtaataattattttatttcatttcttaat 371  Q
     || ||| | |||| ||||||| |||||||| ||||||    
T  42121698 gtgatatgtctaatgattatttgatttcattccttaat 42121735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 135 - 274
Target Start/End: Complemental strand, 19288540 - 19288405
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttcca 234  Q
    |||| ||| |||||||| |||| ||||| ||||||    ||||| ||| ||||||||| |||||||||| ||| |||||||||||||       |||| |    
T  19288540 ctccgtttcaaaatgagtgtcactttagtaaaaaa----aaattatttcaaaatgaatgtcactttacatttctaatacaactttaatttttttcttcta 19288445  T
Q  235 actttaccctcaataaatactccaacttttctctcacaca 274  Q
    |||||||||||||||||| |||||||||||||||| ||||    
T  19288444 actttaccctcaataaattctccaacttttctctctcaca 19288405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 33056362 - 33056244
Alignment:
Q  254 ctccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnnctta-taaagtgagggcagtttagtaaaaatgttatatgtaataatta 352  Q
    |||||||||||||||||||||||||||||||||  ||||| ||||       |||| |||||| ||||||||||||||||| |||||| | |||| ||||    
T  33056362 ctccaacttttctctcacacaattttcaatgcagttttaaatttgtctttttcttaataaagtaagggcagtttagtaaaagtgttatgtttaatgatta 33056263  T
Q  353 ttttatttcatttcttaat 371  Q
    ||| |||||||| ||||||    
T  33056262 tttcatttcattccttaat 33056244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 244 - 298
Target Start/End: Complemental strand, 48838772 - 48838718
Alignment:
Q  244 tcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttg 298  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  48838772 tcaataaatactcaaacttttctctcacacaattttcaatgcaactttaaatttg 48838718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 371
Target Start/End: Complemental strand, 36447794 - 36447571
Alignment:
Q  136 tccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaa 235  Q
    |||||||||||||||  |||| ||||  ||||||   ||| |||||||||||||||| |||||||| | || ||||||||||||||       |||||||    
T  36447794 tccattttaaaatgattgtcactttaataaaaaa---aaatttgttttaaaatgaatatcactttatattttcaatacaactttaatttttttcttccaa 36447698  T
Q  236 ctttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaat 335  Q
    |||||||||          |||||||||||||||||| |||||||||| ||||||||| |||        |||||||||| | | ||||||| |||||      
T  36447697 ctttaccct---------ttccaacttttctctcacataattttcaattcaactttaattttatctttttcttataaagtaaagacagtttaataaaaga 36447607  T
Q  336 gttatatgtaataattattttatttcatttcttaat 371  Q
    |||||||  | ||||||||| ||| |||||||||||    
T  36447606 gttatatccagtaattatttcattccatttcttaat 36447571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 298
Target Start/End: Original strand, 36836058 - 36836180
Alignment:
Q  177 ttgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacaca-- 274  Q
    |||||| ||||||||| || ||||||| || ||||||||||||||       |||||||||||||| ||| |||| ||||||| ||||||||| ||||      
T  36836058 ttgtttcaaaatgaatgtcgctttacattttcaatacaactttaatttttttcttccaactttacc-tcagtaaacactccaatttttctctctcacata 36836156  T
Q  275 attttcaatgcaactttaagtttg 298  Q
    ||||||||||||||||||| ||||    
T  36836157 attttcaatgcaactttaaatttg 36836180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 229 - 340
Target Start/End: Complemental strand, 10684933 - 10684820
Alignment:
Q  229 cttccaactttaccctcaataaatactccaacttttctctc--acacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagttt 326  Q
    |||||||||||||||| |||||||| |  ||||||||||||  |||||||||||||| ||||||||||||||       |||||||||| |||  | |||    
T  10684933 cttccaactttacccttaataaatattaaaacttttctctctcacacaattttcaattcaactttaagtttgtctttttcttataaagtaaggttatttt 10684834  T
Q  327 agtaaaaatgttat 340  Q
    ||||||| ||||||    
T  10684833 agtaaaattgttat 10684820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Complemental strand, 4106867 - 4106816
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  4106867 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 4106816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 19630667 - 19630718
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  19630667 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 19630718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Complemental strand, 23358314 - 23358263
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  23358314 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 23358263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 25546274 - 25546325
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||||||| ||||| |||||||||||||||||||||    
T  25546274 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtga 25546325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 38781207 - 38781258
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  38781207 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 38781258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 47570717 - 47570768
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  47570717 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 47570768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 601 - 651
Target Start/End: Complemental strand, 4107437 - 4107387
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  4107437 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 4107387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 601 - 651
Target Start/End: Original strand, 31770532 - 31770582
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  31770532 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 31770582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 342
Target Start/End: Complemental strand, 40207450 - 40207379
Alignment:
Q  271 cacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatat 342  Q
    ||||||||||||||||| ||||||||||       |||||||||| ||||||||||||||||| ||||||||    
T  40207450 cacaattttcaatgcaattttaagtttgtcattttcttataaagtaagggcagtttagtaaaagtgttatat 40207379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 163 - 298
Target Start/End: Original strand, 6521803 - 6521939
Alignment:
Q  163 caaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaactt 262  Q
    ||||||| | ||| |||||||||||||||| || ||||||| || |||| ||| |||||       ||| |||||||||| ||||||||||||| || ||    
T  6521803 caaaaaaaaaaaatttgttttaaaatgaatatcgctttacattttcaatgcaa-tttaaattttttctttcaactttaccttcaataaatactcaaattt 6521901  T
Q  263 t--tctctcacacaattttcaatgcaactttaagtttg 298  Q
       |||||||||||||||||||| ||| ||||||||||    
T  6521902 ccctctctcacacaattttcaatacaattttaagtttg 6521939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 43813499 - 43813430
Alignment:
Q  177 ttgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctca 246  Q
    |||||||||||||||| |||||||| | |||||||||||||||||       ||||||||||||||||||    
T  43813499 ttgttttaaaatgaatgtcactttatatttccaatacaactttaatttttttcttccaactttaccctca 43813430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 600 - 651
Target Start/End: Complemental strand, 2146765 - 2146714
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| ||||||||||| |||||||||||||||    
T  2146765 ggtcttagatgaagtggtaatccactgaaaataaacccacacacaactgtga 2146714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 5772818 - 5772869
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||  ||||||||||||||| ||||| |||||||||||||||||||||    
T  5772818 ggtcttaaatgaagtggtaaaccactgaaattaaactcacacacaactgtga 5772869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 19105193 - 19105131
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcacttt 200  Q
    |||||||| |||||||| ||| |||||||||||||   |||||||||||||||||||| |||||||    
T  19105193 ctccatttcaaaatgagtgtcgttttagcaaaaaa---aaaattgttttaaaatgaatgtcacttt 19105131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 25112246 - 25112297
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| ||||||||||| |||||||||||||||    
T  25112246 ggtcttagatgaagtggtaatccactgaaaataaacccacacacaactgtga 25112297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 600 - 651
Target Start/End: Complemental strand, 40058367 - 40058316
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||| ||||||||||||    
T  40058367 ggtcttagatgaagtggtaatccactgaaaataaactcatacacaactgtga 40058316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 604 - 651
Target Start/End: Complemental strand, 44084065 - 44084018
Alignment:
Q  604 ttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  44084065 ttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 44084018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 600 - 647
Target Start/End: Original strand, 47250250 - 47250297
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaact 647  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||    
T  47250250 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaact 47250297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 244 - 340
Target Start/End: Original strand, 47272217 - 47272313
Alignment:
Q  244 tcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttat 340  Q
    |||||||||||| ||||||||  ||||||||||||||||||||| |||| |||||       | ||||||   ||||||||||||||||| ||||||    
T  47272217 tcaataaatacttcaactttttcctcacacaattttcaatgcaattttatgtttgtctttttcatataaaacaagggcagtttagtaaaattgttat 47272313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 600 - 651
Target Start/End: Complemental strand, 48146882 - 48146831
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| ||||||| |||||||||||||||||||    
T  48146882 ggtcttagatgaagtggtaatccaatgaaaattaactcacacacaactgtga 48146831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 651
Target Start/End: Complemental strand, 8439206 - 8439156
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| ||||||||||| ||| |||||||||| ||||||||||||||||    
T  8439206 gtcttagatgaagtggtaatccactgaaaataaattcacacacaactgtga 8439156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 651
Target Start/End: Complemental strand, 11355951 - 11355901
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||||||||||    
T  11355951 gtcttagatgaagtggtaatccactgaaattaaactcacacacaactgtga 11355901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 651
Target Start/End: Original strand, 31288224 - 31288274
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| ||||||||||||||| ||||| |||||| ||||||||||||||    
T  31288224 gtcttagatgaagtggtaaaccactgaaattaaacttacacacaactgtga 31288274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 651
Target Start/End: Complemental strand, 47557909 - 47557859
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| ||||||||||||||| ||||| |||||||||| ||||||||||    
T  47557909 gtcttagatgaagtggtaaaccactgaaattaaactcacatacaactgtga 47557859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 601 - 642
Target Start/End: Original strand, 4001844 - 4001885
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacaca 642  Q
    ||||||| ||||||||||||||||||||| ||||||||||||    
T  4001844 gtcttagatgaagtggtaaaccattgaaattaaactcacaca 4001885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 18886668 - 18886712
Alignment:
Q  177 ttgttttaaaatgaatttcactttacaattccaatacaactttaa 221  Q
    |||||||||||||||| |||||||||| || ||||||||||||||    
T  18886668 ttgttttaaaatgaatctcactttacattttcaatacaactttaa 18886712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 266 - 298
Target Start/End: Complemental strand, 19277110 - 19277078
Alignment:
Q  266 tctcacacaattttcaatgcaactttaagtttg 298  Q
    |||||||||||||||||||||||||||||||||    
T  19277110 tctcacacaattttcaatgcaactttaagtttg 19277078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 266 - 298
Target Start/End: Complemental strand, 29001629 - 29001597
Alignment:
Q  266 tctcacacaattttcaatgcaactttaagtttg 298  Q
    |||||||||||||||||||||||||||||||||    
T  29001629 tctcacacaattttcaatgcaactttaagtttg 29001597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 604 - 651
Target Start/End: Original strand, 15634882 - 15634929
Alignment:
Q  604 ttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||| ||||||||||| | | |||||||||||||||||||||||||||    
T  15634882 ttagatgaagtggtaatctactgaaaataaactcacacacaactgtga 15634929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 27915579 - 27915630
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| |||||||||||  |||||||| |||||||| ||||||||||||    
T  27915579 ggtcttagatgaagtggtaattcattgaaattaaactcatacacaactgtga 27915630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 192
Target Start/End: Complemental strand, 29531124 - 29531073
Alignment:
Q  141 tttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaat 192  Q
    ||||||||||| ||| ||||||||||||| | ||||||||||| ||||||||    
T  29531124 tttaaaatgagtgtcgttttagcaaaaaaaaaaaaattgttttgaaatgaat 29531073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 600 - 651
Target Start/End: Complemental strand, 38033858 - 38033807
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||| ||| ||||||||||  ||| |||||||||||||||||||||||||||    
T  38033858 ggtcatagatgaagtggtactccactgaaaataaactcacacacaactgtga 38033807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 600 - 651
Target Start/End: Complemental strand, 41183944 - 41183893
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||| ||| ||| |||||||||||||||||| ||||||||    
T  41183944 ggtcttagatgaagtgataatccactgaaaataaactcacacataactgtga 41183893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 45948817 - 45948760
Alignment:
Q  140 ttttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcacttt 200  Q
    |||||||||||| ||| |||||||||||||   |||||||||| ||||||||| |||||||    
T  45948817 ttttaaaatgagtgtcgttttagcaaaaaa---aaaattgtttcaaaatgaatgtcacttt 45948760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 601 - 642
Target Start/End: Original strand, 7162790 - 7162831
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacaca 642  Q
    ||||||| ||||||||||| ||| ||||||||||||||||||    
T  7162790 gtcttagatgaagtggtaatccactgaaaataaactcacaca 7162831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 22597229 - 22597273
Alignment:
Q  177 ttgttttaaaatgaatttcactttacaattccaatacaactttaa 221  Q
    |||||| ||||||||| |||||||||| || ||||||||||||||    
T  22597229 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaa 22597273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 32501940 - 32501879
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcacttt 200  Q
    ||||||||||||||||| ||| ||||| ||||||    |||||||||||||||| ||| |||||||    
T  32501940 ctccattttaaaatgagtgtcgttttaacaaaaa----aaaattgttttaaaataaatatcacttt 32501879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 32873318 - 32873274
Alignment:
Q  177 ttgttttaaaatgaatttcactttacaattccaatacaactttaa 221  Q
    |||||||||||||||| |||||||| | ||||||||||| |||||    
T  32873318 ttgttttaaaatgaatgtcactttatatttccaatacaattttaa 32873274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 611 - 651
Target Start/End: Complemental strand, 34763560 - 34763520
Alignment:
Q  611 aagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||||| ||| ||||| |||||||||||||||||||||    
T  34763560 aagtggtaatccactgaaattaaactcacacacaactgtga 34763520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886 (Bit Score: 83; Significance: 5e-39; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 173 - 408
Target Start/End: Complemental strand, 4267 - 4031
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||||||||||||||| ||| | |||||||| ||| ||||||| |||||       |||||||||||| |||||||||||||||||||||||||||||||    
T  4267 aaaattgttttaaaataaatgttactttacatttctaatacaattttaatttttttcttccaactttatcctcaataaatactccaacttttctctcaca 4168  T
Q  273 caattttcaatgcaactttaagtttg-nnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaat 371  Q
     ||||||||||  |||||||||||||         ||||||||| ||| || ||| ||||||||||||| | |||| ||| ||| ||| |||||||||||    
T  4167 taattttcaatcaaactttaagtttgtcattttttttataaagtaaggacaatttcgtaaaaatgttatgtataatgattgtttcattccatttcttaat 4068  T
Q  372 atgcgtgtcaaactcttaaacgacacttattgtgaaa 408  Q
    ||| || ||||| |||||||||||| | |||||||||    
T  4067 atgtgtttcaaaatcttaaacgacattcattgtgaaa 4031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 229 - 408
Target Start/End: Complemental strand, 16141 - 15963
Alignment:
Q  229 cttccaactttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgnnnnnnncttataaagtgagggcagtttag 328  Q
    |||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||        ||||||||| | || |||||||    
T  16141 cttcaaactttaccctcaataaatattccaacctttctctcacacaattttcaatgcaactttaagtttgtcatttt-ttataaagtaaaggtagtttag 16043  T
Q  329 taaaaatgttatatgtaataattattttatttcatttcttaatatgcgtgtcaaactcttaaacgacacttattgtgaaa 408  Q
    |||||||||||||| |||| ||||||| |||| |||| |||||||| || |||||   |||||||||||| |||| ||||    
T  16042 taaaaatgttatatataatgattatttcatttaattttttaatatgtgtttcaaaacgttaaacgacactcattgcgaaa 15963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 78; Significance: 5e-36; HSPs: 3)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 184 - 371
Target Start/End: Original strand, 1548 - 1735
Alignment:
Q  184 aaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaattttcaat 283  Q
    ||||||||| |||||||| | |||||||||||||||||       | |||||||||| ||||||||||  ||||||||||||||||||| ||||||||||    
T  1548 aaaatgaatgtcactttatatttccaatacaactttaatttttgtcatccaactttatcctcaataaaatctccaacttttctctcacataattttcaat 1647  T
Q  284 gcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaat 371  Q
    |||||||||| ||||       |||||||||| |||||| ||||||||||| |||||||  ||||||||||| |||  ||||||||||    
T  1648 gcaactttaattttgtctttttcttataaagtaagggcaatttagtaaaaacgttatatccaataattatttcattatatttcttaat 1735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 13950 - 14001
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  13950 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 14001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 19630 - 19681
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  19630 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 19681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 135 - 298
Target Start/End: Original strand, 321688 - 321847
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttcca 234  Q
    ||||||||||||||||| |||  ||||||||||||      ||||||||||||||||| || ||||||| |||||||||||||||||       ||||||    
T  321688 ctccattttaaaatgagtgtcgctttagcaaaaaa------attgttttaaaatgaatgtcgctttacatttccaatacaactttaatttttttcttcca 321781  T
Q  235 actttaccctcaataaatactccaactttt--ctctcacacaattttcaatgcaactttaagtttg 298  Q
    |||||||||||||||| ||||| |||||||  ||||||||||||||||||||||| ||||||||||    
T  321782 actttaccctcaataattactcaaacttttcgctctcacacaattttcaatgcaattttaagtttg 321847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 73; Significance: 5e-33; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 135 - 298
Target Start/End: Complemental strand, 70647 - 70486
Alignment:
Q  135 ctccattttaaaatgagcgtcattttagcaaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttcca 234  Q
    |||| ||| |||||||| ||| ||||||| |||||    ||||||||| ||||||||| |||||||||| || |||| |||||||||       ||||||    
T  70647 ctccgtttcaaaatgagtgtcgttttagccaaaaa----aaattgtttcaaaatgaatgtcactttacattttcaatgcaactttaatttttttcttcca 70552  T
Q  235 actttaccctcaataaatactccaacttttc--tctcacacaattttcaatgcaactttaagtttg 298  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||    
T  70551 actttaccctcaataaatactccaacttttctctctcacacaattttcaatacaactttaagtttg 70486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 173 - 298
Target Start/End: Complemental strand, 7856 - 7733
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||||||||||||||||||| |||||||||| ||  ||||||||||| |       ||||||||||||  ||||||||||||| ||||||||||||||||    
T  7856 aaaattgttttaaaatgaatgtcactttacatttt-aatacaacttttaattttt-cttccaactttaatctcaataaatacttcaacttttctctcaca 7759  T
Q  273 caattttcaatgcaactttaagtttg 298  Q
    ||||||||||||||||||||||||||    
T  7758 caattttcaatgcaactttaagtttg 7733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 173 - 298
Target Start/End: Complemental strand, 13217 - 13092
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcaca 272  Q
    |||||||||||||||||||  |||||||||| ||||||||||| |||||       || |||||||||||||||||||||||| |||||||||||   ||    
T  13217 aaaattgttttaaaatgaacgtcactttacatttccaatacaattttaatttttttctcccaactttaccctcaataaatacttcaacttttctccggca 13118  T
Q  273 caattttcaatgcaactttaagtttg 298  Q
    |||||||||||| |||||||| ||||    
T  13117 caattttcaatgtaactttaattttg 13092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 164 - 293
Target Start/End: Original strand, 8143 - 8274
Alignment:
Q  164 aaaaaagataaaattgttttaaaatgaatttcactttacaattccaatacaactttaannnnnnn--cttccaactttaccctcaataaatactccaact 261  Q
    |||||| | |||||||||| ||||||||| ||| |||||| || ||||||||||||||         ||| |||||||| |||||| |||||||||||||    
T  8143 aaaaaaaaaaaaattgtttcaaaatgaatgtcaatttacattttcaatacaactttaatttttttttctttcaactttaacctcaaaaaatactccaact 8242  T
Q  262 tttctctcacacaattttcaatgcaactttaa 293  Q
    ||||||||||||||||||||| ||||||||||    
T  8243 tttctctcacacaattttcaaagcaactttaa 8274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 184 - 371
Target Start/End: Complemental strand, 12219 - 12042
Alignment:
Q  184 aaaatgaatttcactttacaattccaatacaactttaannnnnnncttccaactttaccctcaataaatactccaacttttctctcacacaattttcaat 283  Q
    ||||||||| ||| |||||| |||||||| ||||||||       |||||||||||||||||         || ||||||||||||||||||||||||||    
T  12219 aaaatgaatgtcattttacatttccaatataactttaatttttttcttccaactttaccctc---------tcaaacttttctctcacacaattttcaat 12129  T
Q  284 gcaactttaagtttgnnnnnnncttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaat 371  Q
    |||||||||||||||       |||||||||| | ||||||||||||||| |||||| | |||| ||||||| ||| |||| ||||||    
T  12128 gcaactttaagtttgtctttttcttataaagt-aaggcagtttagtaaaagtgttatgtctaatgattatttcattccattccttaat 12042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 233 - 298
Target Start/End: Original strand, 158154 - 158219
Alignment:
Q  233 caactttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttg 298  Q
    ||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||    
T  158154 caactttaccctcaataaatactacaacttttctctcgcataattttcaatgcaactttaagtttg 158219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0580
Description:

Target: scaffold0580; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 306 - 371
Target Start/End: Original strand, 1701 - 1766
Alignment:
Q  306 cttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaat 371  Q
    |||||||||| ||| ||||||||||||||||||||||  ||| ||||||| |||||||||||||||    
T  1701 cttataaagtaaggtcagtttagtaaaaatgttatatccaatgattatttcatttcatttcttaat 1766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 306 - 371
Target Start/End: Original strand, 9440 - 9505
Alignment:
Q  306 cttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaat 371  Q
    |||||||||| ||| ||||||||||||||||||||||  ||| ||||||| |||||||||||||||    
T  9440 cttataaagtaaggtcagtttagtaaaaatgttatatccaatgattatttcatttcatttcttaat 9505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1348 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold1348
Description:

Target: scaffold1348; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Original strand, 861 - 912
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  861 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Complemental strand, 56610 - 56559
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  56610 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 56559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 600 - 647
Target Start/End: Original strand, 9972 - 10019
Alignment:
Q  600 ggtcttaggtgaagtggtaaaccattgaaaataaactcacacacaact 647  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||    
T  9972 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaact 10019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 651
Target Start/End: Original strand, 8943 - 8993
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| |||||||||||| || ||||| |||||||||||||||||||||    
T  8943 gtcttagatgaagtggtaaatcactgaaattaaactcacacacaactgtga 8993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 651
Target Start/End: Complemental strand, 114380 - 114330
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| ||||||||||||||| ||||| ||||||||||||||| |||||    
T  114380 gtcttagatgaagtggtaaaccactgaaactaaactcacacacaattgtga 114330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 651
Target Start/End: Complemental strand, 22291 - 22241
Alignment:
Q  601 gtcttaggtgaagtggtaaaccattgaaaataaactcacacacaactgtga 651  Q
    ||||||| ||||||||||| ||| ||||| ||||||||||| |||||||||    
T  22291 gtcttagatgaagtggtaatccactgaaattaaactcacacgcaactgtga 22241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 31619 - 31667
Alignment:
Q  173 aaaattgttttaaaatgaatttcactttacaattccaatacaactttaa 221  Q
    |||||||||||||||||||| | |||||||| |||||||| || |||||    
T  31619 aaaattgttttaaaatgaatgttactttacatttccaataaaattttaa 31667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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