View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: F9346-LTR4-TNT-insertion-1 (Length: 152)

Name: F9346-LTR4-TNT-insertion-1
Description: F9346-LTR4
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] F9346-LTR4-TNT-insertion-1
F9346-LTR4-TNT-insertion-1
[»] chr4 (48 HSPs)
chr4 (8-142)||(4751400-4751534)
chr4 (8-96)||(36072947-36073035)
chr4 (8-97)||(10442766-10442855)
chr4 (8-97)||(31078796-31078885)
chr4 (5-97)||(21802296-21802388)
chr4 (8-96)||(49387865-49387953)
chr4 (8-97)||(33530665-33530754)
chr4 (8-97)||(47290065-47290154)
chr4 (8-96)||(2624837-2624925)
chr4 (8-96)||(22199261-22199349)
chr4 (8-95)||(7745089-7745176)
chr4 (8-106)||(24128230-24128327)
chr4 (8-97)||(44893425-44893514)
chr4 (8-104)||(23964442-23964538)
chr4 (5-97)||(24392666-24392758)
chr4 (8-98)||(53123028-53123119)
chr4 (8-97)||(36073349-36073438)
chr4 (8-97)||(50156555-50156644)
chr4 (8-96)||(46441844-46441932)
chr4 (7-97)||(37934917-37935007)
chr4 (8-97)||(44893190-44893280)
chr4 (5-90)||(42671675-42671760)
chr4 (8-68)||(9088898-9088958)
chr4 (8-64)||(17655462-17655518)
chr4 (20-92)||(11314050-11314122)
chr4 (22-92)||(25063373-25063443)
chr4 (19-92)||(22199453-22199525)
chr4 (19-92)||(36073145-36073217)
chr4 (19-92)||(36073543-36073615)
chr4 (19-84)||(37219825-37219890)
chr4 (19-92)||(46442038-46442110)
chr4 (5-83)||(36073717-36073795)
chr4 (5-79)||(44744452-44744526)
chr4 (19-92)||(4751641-4751713)
chr4 (19-92)||(9089064-9089136)
chr4 (19-92)||(10442586-10442658)
chr4 (19-92)||(21802119-21802191)
chr4 (19-92)||(31078618-31078690)
chr4 (19-92)||(33530483-33530555)
chr4 (19-92)||(44893012-44893084)
chr4 (19-92)||(44893620-44893692)
chr4 (19-92)||(47290260-47290332)
chr4 (19-92)||(53123225-53123297)
chr4 (4-52)||(11314207-11314255)
chr4 (19-84)||(42671862-42671927)
chr4 (19-84)||(49387694-49387758)
chr4 (59-90)||(9111321-9111352)
chr4 (70-97)||(30563223-30563250)
[»] chr5 (35 HSPs)
chr5 (8-97)||(3362777-3362866)
chr5 (8-97)||(38899703-38899792)
chr5 (8-96)||(12850801-12850889)
chr5 (8-97)||(2477635-2477724)
chr5 (8-97)||(6043488-6043577)
chr5 (8-96)||(11361108-11361196)
chr5 (5-96)||(22913028-22913119)
chr5 (8-97)||(4892201-4892290)
chr5 (8-97)||(8145374-8145463)
chr5 (8-96)||(25398238-25398326)
chr5 (8-97)||(14138667-14138756)
chr5 (8-96)||(4433984-4434072)
chr5 (8-96)||(33584306-33584394)
chr5 (8-96)||(3521983-3522071)
chr5 (5-96)||(12614707-12614798)
chr5 (5-96)||(17545659-17545750)
chr5 (8-96)||(37321770-37321859)
chr5 (5-68)||(31640914-31640977)
chr5 (19-92)||(12850996-12851068)
chr5 (19-92)||(38899524-38899597)
chr5 (19-92)||(4892396-4892468)
chr5 (19-92)||(22912856-22912928)
chr5 (19-92)||(33584128-33584200)
chr5 (28-84)||(10458409-10458465)
chr5 (41-92)||(27481830-27481881)
chr5 (19-92)||(3362973-3363045)
chr5 (19-92)||(3521806-3521878)
chr5 (19-92)||(6043311-6043383)
chr5 (19-92)||(8145567-8145639)
chr5 (19-92)||(25398432-25398504)
chr5 (59-97)||(13664641-13664679)
chr5 (19-92)||(2477830-2477902)
chr5 (19-92)||(12614536-12614609)
chr5 (19-92)||(14138861-14138933)
chr5 (70-97)||(31640964-31640991)
[»] chr8 (59 HSPs)
chr8 (5-96)||(34665382-34665473)
chr8 (8-97)||(32064744-32064833)
chr8 (8-97)||(17841827-17841916)
chr8 (8-97)||(40780106-40780195)
chr8 (8-97)||(42755019-42755108)
chr8 (8-96)||(20091778-20091866)
chr8 (8-97)||(1645942-1646031)
chr8 (8-97)||(15187559-15187648)
chr8 (8-96)||(24211530-24211618)
chr8 (5-97)||(31347756-31347848)
chr8 (8-96)||(32393858-32393946)
chr8 (8-96)||(35353041-35353129)
chr8 (8-95)||(14128865-14128952)
chr8 (8-97)||(37986032-37986121)
chr8 (8-104)||(39772778-39772874)
chr8 (5-95)||(27782091-27782181)
chr8 (8-97)||(6108210-6108299)
chr8 (8-93)||(8453837-8453922)
chr8 (5-97)||(7017839-7017931)
chr8 (5-97)||(41819752-41819844)
chr8 (18-97)||(26042103-26042182)
chr8 (5-96)||(30835021-30835111)
chr8 (5-86)||(7021988-7022069)
chr8 (20-88)||(38016979-38017047)
chr8 (8-91)||(25581216-25581299)
chr8 (5-97)||(24844833-24844924)
chr8 (5-96)||(27835427-27835518)
chr8 (8-68)||(3597018-3597078)
chr8 (24-96)||(37132651-37132723)
chr8 (17-92)||(3890413-3890488)
chr8 (5-68)||(3890591-3890653)
chr8 (4-53)||(15972850-15972899)
chr8 (19-84)||(30834862-30834927)
chr8 (19-92)||(1503642-1503714)
chr8 (19-92)||(17841649-17841721)
chr8 (19-92)||(20091600-20091672)
chr8 (19-92)||(24211171-24211243)
chr8 (19-92)||(26041912-26041984)
chr8 (19-92)||(34665575-34665647)
chr8 (19-92)||(37132479-37132552)
chr8 (19-92)||(40779928-40780000)
chr8 (19-92)||(1645763-1645835)
chr8 (15-68)||(3817914-3817967)
chr8 (19-92)||(6108032-6108104)
chr8 (19-92)||(10044542-10044614)
chr8 (19-92)||(14129053-14129125)
chr8 (19-92)||(15187754-15187826)
chr8 (19-92)||(31347575-31347647)
chr8 (19-92)||(37985855-37985927)
chr8 (17-85)||(35353233-35353300)
chr8 (33-84)||(1886621-1886672)
chr8 (17-92)||(30055708-30055782)
chr8 (16-96)||(30055543-30055616)
chr8 (19-92)||(25581038-25581110)
chr8 (19-92)||(32064940-32065012)
chr8 (19-84)||(39772609-39772673)
chr8 (19-92)||(42754841-42754913)
chr8 (99-142)||(7172917-7172960)
chr8 (17-84)||(24844667-24844734)
[»] chr7 (34 HSPs)
chr7 (7-96)||(4974711-4974800)
chr7 (8-97)||(45637711-45637800)
chr7 (8-96)||(42611811-42611899)
chr7 (8-97)||(15329272-15329361)
chr7 (9-97)||(15577828-15577916)
chr7 (8-96)||(48880904-48880992)
chr7 (8-97)||(35444557-35444646)
chr7 (8-96)||(34482835-34482923)
chr7 (8-96)||(3961979-3962067)
chr7 (8-96)||(24394972-24395060)
chr7 (8-96)||(25167827-25167915)
chr7 (5-97)||(37477054-37477146)
chr7 (5-96)||(15238382-15238473)
chr7 (5-96)||(20010072-20010162)
chr7 (4-93)||(36790439-36790528)
chr7 (5-97)||(18036977-18037069)
chr7 (5-92)||(29737143-29737230)
chr7 (5-97)||(42696082-42696174)
chr7 (8-68)||(30848597-30848657)
chr7 (19-92)||(3962172-3962244)
chr7 (19-92)||(4974534-4974606)
chr7 (19-92)||(25167655-25167727)
chr7 (7-70)||(40880768-40880831)
chr7 (19-92)||(15577646-15577718)
chr7 (19-92)||(24395165-24395237)
chr7 (19-92)||(42612005-42612077)
chr7 (19-84)||(42696277-42696342)
chr7 (19-92)||(48880726-48880798)
chr7 (19-84)||(29737338-29737403)
chr7 (19-92)||(30848763-30848835)
chr7 (19-84)||(34483032-34483096)
chr7 (19-92)||(35876438-35876510)
chr7 (19-92)||(37476879-37476951)
chr7 (19-92)||(45637905-45637977)
[»] chr6 (27 HSPs)
chr6 (8-97)||(33695304-33695393)
chr6 (8-97)||(33696695-33696784)
chr6 (8-97)||(6127274-6127363)
chr6 (8-97)||(23291061-23291150)
chr6 (5-97)||(28675147-28675239)
chr6 (5-96)||(17705439-17705530)
chr6 (8-97)||(18365550-18365639)
chr6 (8-97)||(18370814-18370903)
chr6 (8-96)||(17175998-17176086)
chr6 (5-90)||(11548562-11548647)
chr6 (8-96)||(25986930-25987018)
chr6 (17-98)||(18889683-18889763)
chr6 (8-96)||(6031718-6031806)
chr6 (8-85)||(32702216-32702293)
chr6 (5-97)||(2309397-2309489)
chr6 (5-97)||(9752219-9752310)
chr6 (5-93)||(8515700-8515787)
chr6 (19-92)||(29693639-29693712)
chr6 (19-92)||(11548388-11548460)
chr6 (19-92)||(18365373-18365445)
chr6 (19-92)||(18370637-18370709)
chr6 (19-92)||(28675342-28675414)
chr6 (33-92)||(34238886-34238944)
chr6 (19-92)||(2309222-2309294)
chr6 (19-92)||(17175820-17175892)
chr6 (19-92)||(32702399-32702471)
chr6 (19-92)||(33696891-33696963)
[»] chr2 (30 HSPs)
chr2 (5-97)||(9293550-9293642)
chr2 (8-97)||(23268039-23268128)
chr2 (8-97)||(35160756-35160845)
chr2 (8-96)||(21936081-21936169)
chr2 (8-95)||(10661888-10661975)
chr2 (5-97)||(14941340-14941432)
chr2 (5-97)||(43330911-43331003)
chr2 (8-97)||(7475485-7475574)
chr2 (8-97)||(13354845-13354934)
chr2 (8-93)||(31174811-31174896)
chr2 (8-96)||(33380207-33380295)
chr2 (5-94)||(21393662-21393751)
chr2 (5-96)||(9723405-9723496)
chr2 (5-97)||(27847631-27847723)
chr2 (8-68)||(3989104-3989164)
chr2 (5-84)||(22591494-22591573)
chr2 (18-92)||(22592905-22592979)
chr2 (19-92)||(33380401-33380473)
chr2 (19-92)||(35160953-35161025)
chr2 (19-92)||(9293374-9293446)
chr2 (19-92)||(10662082-10662154)
chr2 (19-92)||(13355042-13355114)
chr2 (19-92)||(21393485-21393556)
chr2 (19-92)||(23267861-23267933)
chr2 (4-54)||(37335755-37335805)
chr2 (59-93)||(40262714-40262748)
chr2 (19-92)||(3989270-3989342)
chr2 (19-84)||(9723600-9723665)
chr2 (19-92)||(43331106-43331178)
chr2 (19-54)||(34320993-34321028)
[»] chr1 (41 HSPs)
chr1 (8-96)||(40214988-40215076)
chr1 (8-97)||(16045775-16045864)
chr1 (8-96)||(44094698-44094786)
chr1 (5-96)||(32000241-32000332)
chr1 (8-97)||(19015403-19015492)
chr1 (8-97)||(25463675-25463764)
chr1 (8-96)||(9910270-9910358)
chr1 (8-96)||(36966685-36966773)
chr1 (8-96)||(37821811-37821899)
chr1 (8-97)||(18404441-18404530)
chr1 (8-96)||(6883487-6883575)
chr1 (8-93)||(3559620-3559705)
chr1 (8-97)||(25973413-25973501)
chr1 (8-97)||(41876419-41876508)
chr1 (5-97)||(40273701-40273793)
chr1 (5-97)||(27523229-27523323)
chr1 (5-92)||(33786609-33786695)
chr1 (7-96)||(44691005-44691094)
chr1 (5-97)||(34519757-34519849)
chr1 (20-84)||(44690828-44690892)
chr1 (8-96)||(51737510-51737593)
chr1 (19-92)||(19015598-19015670)
chr1 (19-92)||(25463870-25463942)
chr1 (19-92)||(32000065-32000137)
chr1 (19-92)||(33786430-33786502)
chr1 (19-92)||(40273902-40273974)
chr1 (19-92)||(51737699-51737771)
chr1 (59-97)||(51620979-51621017)
chr1 (19-92)||(6883681-6883753)
chr1 (19-84)||(9910098-9910162)
chr1 (19-92)||(20304929-20305001)
chr1 (19-92)||(37821633-37821705)
chr1 (19-92)||(40215182-40215254)
chr1 (19-92)||(41876241-41876313)
chr1 (23-92)||(52064376-52064445)
chr1 (17-92)||(27523054-27523129)
chr1 (19-92)||(25973601-25973673)
chr1 (19-92)||(44094891-44094963)
chr1 (59-96)||(52329319-52329356)
chr1 (69-97)||(9389275-9389303)
chr1 (19-54)||(52329469-52329504)
[»] scaffold0096 (2 HSPs)
scaffold0096 (8-97)||(41010-41099)
scaffold0096 (19-92)||(41204-41276)
[»] chr3 (56 HSPs)
chr3 (8-97)||(3574504-3574593)
chr3 (8-96)||(6041884-6041972)
chr3 (8-97)||(2754716-2754805)
chr3 (8-97)||(3137391-3137480)
chr3 (8-97)||(33113792-33113881)
chr3 (8-96)||(3456064-3456152)
chr3 (8-96)||(37217030-37217118)
chr3 (8-96)||(48160905-48160993)
chr3 (8-97)||(11347267-11347356)
chr3 (8-97)||(34482887-34482976)
chr3 (8-96)||(30385011-30385099)
chr3 (5-96)||(33145713-33145803)
chr3 (5-95)||(9797003-9797093)
chr3 (8-97)||(42297352-42297442)
chr3 (8-97)||(22426321-22426410)
chr3 (9-96)||(19650878-19650965)
chr3 (8-96)||(8320561-8320649)
chr3 (5-96)||(8362019-8362110)
chr3 (4-97)||(24343546-24343639)
chr3 (8-97)||(37522052-37522141)
chr3 (8-98)||(36865004-36865094)
chr3 (4-97)||(33839530-33839623)
chr3 (5-96)||(41224233-41224324)
chr3 (5-68)||(41883197-41883260)
chr3 (5-85)||(42921154-42921234)
chr3 (5-84)||(47738117-47738196)
chr3 (8-53)||(3089460-3089505)
chr3 (16-97)||(26612784-26612865)
chr3 (19-92)||(40328025-40328098)
chr3 (19-92)||(3137213-3137285)
chr3 (19-92)||(6042071-6042143)
chr3 (19-92)||(34482687-34482759)
chr3 (19-92)||(36864831-36864904)
chr3 (19-84)||(47738305-47738370)
chr3 (19-87)||(33839729-33839797)
chr3 (59-93)||(40327878-40327912)
chr3 (19-92)||(3089613-3089685)
chr3 (19-92)||(8361838-8361910)
chr3 (19-92)||(19650699-19650771)
chr3 (19-92)||(30385594-30385666)
chr3 (19-92)||(33113988-33114060)
chr3 (19-92)||(33145906-33145978)
chr3 (19-92)||(37522247-37522319)
chr3 (19-92)||(41224428-41224500)
chr3 (99-143)||(25108593-25108637)
chr3 (65-97)||(47402630-47402662)
chr3 (19-92)||(3574325-3574397)
chr3 (19-92)||(8320381-8320453)
chr3 (19-92)||(9796828-9796900)
chr3 (19-92)||(22426144-22426216)
chr3 (19-84)||(26612940-26613005)
chr3 (19-92)||(37216852-37216924)
chr3 (19-92)||(42921319-42921392)
chr3 (19-84)||(46919088-46919153)
chr3 (8-40)||(42297920-42297952)
chr3 (19-54)||(42298056-42298091)
[»] scaffold0178 (2 HSPs)
scaffold0178 (8-96)||(11621-11709)
scaffold0178 (19-84)||(11815-11879)
[»] scaffold0085 (1 HSPs)
scaffold0085 (8-96)||(47850-47938)
[»] scaffold0471 (1 HSPs)
scaffold0471 (8-106)||(12833-12930)
[»] scaffold0204 (1 HSPs)
scaffold0204 (8-97)||(4395-4484)
[»] scaffold0665 (1 HSPs)
scaffold0665 (8-95)||(3069-3156)
[»] scaffold0228 (5 HSPs)
scaffold0228 (8-85)||(8413-8490)
scaffold0228 (8-85)||(15995-16072)
scaffold0228 (8-85)||(25947-26024)
scaffold0228 (19-92)||(26130-26202)
scaffold0228 (19-92)||(16178-16250)
[»] scaffold0041 (1 HSPs)
scaffold0041 (7-70)||(85452-85515)


Alignment Details
Target: chr4 (Bit Score: 135; Significance: 1e-70; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 135; E-Value: 1e-70
Query Start/End: Original strand, 8 - 142
Target Start/End: Complemental strand, 4751534 - 4751400
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctctgttatttaat 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4751534 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctctgttatttaat 4751435  T
Q  108 atcattctatttaactacttcattaactacaatta 142  Q
    |||||||||||||||||||||||||||||||||||    
T  4751434 atcattctatttaactacttcattaactacaatta 4751400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 7e-41
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 36073035 - 36072947
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  36073035 atttcttgataaaatctaagggtggttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 36072947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 5e-39
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 10442766 - 10442855
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10442766 atttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctct 10442855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 5e-39
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 31078796 - 31078885
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  31078796 atttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctct 31078885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 21802296 - 21802388
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  21802296 acaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcattgctct 21802388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 49387865 - 49387953
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  49387865 atttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 49387953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 33530665 - 33530754
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  33530665 atttcttgataaaatctaagggtgattattctgccatgtcattcttgaatttttcttgataaaatctttcttgatatatagcattgctct 33530754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 47290154 - 47290065
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  47290154 atttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctct 47290065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 2624925 - 2624837
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  2624925 atttcttgataaaatctaagggtgattattctgccatttcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 2624837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 22199349 - 22199261
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    ||||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  22199349 atttcttgataaaatctaaggctgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 22199261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 7745089 - 7745176
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgct 95  Q
    |||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  7745089 atttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgct 7745176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 7e-35
Query Start/End: Original strand, 8 - 106
Target Start/End: Complemental strand, 24128327 - 24128230
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctctgttatttaa 106  Q
    ||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  24128327 atttcttgataaaatctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctct-ttatttaa 24128230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 44893514 - 44893425
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||    
T  44893514 atttcttgataaaatctaagggtgattattctgccatgtcattcttgaaatttttttgaaaaaatctttcttgatatatagcattgctct 44893425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 23964442 - 23964538
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctctgttattt 104  Q
    |||||||||||||||||||||||| |||||||||||||||||||||  |||||| ||||||||||||||||||||||||| ||||||||| ||||||    
T  23964442 atttcttgataaaatctaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatataacattgctcttttattt 23964538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 24392758 - 24392666
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||    
T  24392758 acaatttcttgataaaatttaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcattgctct 24392666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 53123119 - 53123028
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttc-ttgataaaatctttcttgatatatagcattgctctg 98  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||    
T  53123119 atttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttctttgaaaaaatctttcttgatatatagcattgctctg 53123028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 7e-32
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 36073438 - 36073349
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||    
T  36073438 atttcttgataaaatttaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattcctct 36073349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 7e-32
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 50156555 - 50156644
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||| |||||||||||| |||||||||||||||||    
T  50156555 atttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttaatatatagcattgctct 50156644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 3e-31
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 46441932 - 46441844
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||    
T  46441932 atttcttgataaaatctaagggtgattattttgccatgtcattcttgaaattttcttaaaaaaatctttcttgatatatagcattgctc 46441844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 7 - 97
Target Start/End: Original strand, 37934917 - 37935007
Alignment:
Q  7 aatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||||  |||||| ||||||||||||||  ||||| |||||||||||||| ||||||||||||||||||||    
T  37934917 aatttcttgataaaatctaagggtgagtattctaccatgtcattcttgacatttttttgataaaatcttttttgatatatagcattgctct 37935007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 44893190 - 44893280
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaa-ttttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| || |||| |||| |||||||||||| |||||||||||||||||    
T  44893190 atttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttttttgaaaaaatctttcttaatatatagcattgctct 44893280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 4e-27
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 42671760 - 42671675
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagca 90  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||  | |||| |||||||||||||| |||||||||||||    
T  42671760 acaatttcttgataaaatctaagggtgattattctgccatgtcattcttaaattttttttgataaaatctttattgatatatagca 42671675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 9088958 - 9088898
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgata 68  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  9088958 atttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgata 9088898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 17655518 - 17655462
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttctt 64  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  17655518 atttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttctt 17655462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 11314122 - 11314050
Alignment:
Q  20 aatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||||||| ||||| || ||||||||||||| |  ||||||||||||||| |||||||||| |||||||    
T  11314122 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttgatatctagcatt 11314050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 92
Target Start/End: Complemental strand, 25063443 - 25063373
Alignment:
Q  22 tctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||| ||| ||||||| |||||||||||||| |  ||||||||||||||| |||||||||| |||||||    
T  25063443 tctaagagtgattattctaccatgtcattcttgaatctttcttgataaaatcattcttgatatctagcatt 25063373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 22199453 - 22199525
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  22199453 aaatctaaaggtgattattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatatctagcatt 22199525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 36073145 - 36073217
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||||||||| |||||||||||||||| | ||||||| |||||||| || ||||||| |||||||    
T  36073145 aaatctaaaggtggttattgtgccatgtcattcttgaatttttctt-ataaaatcatttttgatatctagcatt 36073217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 36073543 - 36073615
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  36073543 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 36073615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 37219825 - 37219890
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatat 84  Q
    |||||||||| || |||||||||||||||||||||  |  ||||||||||||||| ||||||||||    
T  37219825 aaatctaaggatgattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatat 37219890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 46442038 - 46442110
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  46442038 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 46442110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 36073717 - 36073795
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgata 83  Q
    |||||||||| |||||||||||  ||| ||||| || ||||||||||||  |  |||||| ||||||||||||||||||    
T  36073717 acaatttcttcataaaatctaaaagtgattattttgtcatgtcattcttaaatctttcttcataaaatctttcttgata 36073795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 44744526 - 44744452
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttctt 79  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||| ||  |  |||||| ||||||||||||||    
T  44744526 acaattttttgataaaatttaagggtgattattctaccatgtcatttttaaatatttcttaataaaatctttctt 44744452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 4751641 - 4751713
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||||||||| |||||||||||||||  | ||||||| |||||||  |||||||||| |||||||    
T  4751641 aaatctaaaggtggttattgtgccatgtcattcttaaatttttctt-ataaaattattcttgatatctagcatt 4751713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 9089064 - 9089136
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| | || ||||| |||||||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  9089064 aaatctaaagatgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 9089136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 10442658 - 10442586
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||||||| |  |||||| |||||||| |||||||||| |||||||    
T  10442658 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 10442586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 21802191 - 21802119
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    ||||||||||||| ||||| || ||||||||||||| |  |||||| |||||||| |||||||||| |||||||    
T  21802191 aaatctaagggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 21802119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 31078690 - 31078618
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| | || ||||| ||||||||||||||| ||||||| || |||||||| |||||||||| |||||||    
T  31078690 aaatctaaagatgattattgtgccatgtcattctt-gaattttttttataaaatcattcttgatatctagcatt 31078618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 33530555 - 33530483
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| ||||||||||||||||| || || || |||||||| |||||||||| |||||||    
T  33530555 aaatctaaaggtgattattgtgccatgtcattcttgg-atcttttttataaaatcattcttgatatctagcatt 33530483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 44893084 - 44893012
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||||||  | ||||||| |||||||| |||||||||| |||||||    
T  44893084 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 44893012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 44893620 - 44893692
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||||||  | ||||||| |||||||| |||||||||| |||||||    
T  44893620 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 44893692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 47290260 - 47290332
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| | |||||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  47290260 aaatctaaaggtgattattgtaccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 47290332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 53123225 - 53123297
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| | || ||||| |||||||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  53123225 aaatctaaagatgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 53123297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 11314207 - 11314255
Alignment:
Q  4 aacaatttcttgataaaatctaagggtggttattctgccatgtcattct 52  Q
    ||||||||||||||| ||||||||| || |||||||| |||||||||||    
T  11314207 aacaatttcttgatataatctaaggatgattattctgtcatgtcattct 11314255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 42671862 - 42671927
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatat 84  Q
    |||||||||  || ||||| || ||||||||||||| |  ||||||||||||||| ||||||||||    
T  42671862 aaatctaagaatgattattatgtcatgtcattcttgaatctttcttgataaaatcattcttgatat 42671927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 49387758 - 49387694
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatat 84  Q
    |||||||| |||| ||||| |||||||||||||||| | ||||||| |||||||| | ||||||||    
T  49387758 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcatccttgatat 49387694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 59 - 90
Target Start/End: Complemental strand, 9111352 - 9111321
Alignment:
Q  59 tttcttgataaaatctttcttgatatatagca 90  Q
    |||||||||||||||||||||| |||||||||    
T  9111352 tttcttgataaaatctttcttggtatatagca 9111321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 70 - 97
Target Start/End: Complemental strand, 30563250 - 30563223
Alignment:
Q  70 aatctttcttgatatatagcattgctct 97  Q
    ||||||||||||||||||||||||||||    
T  30563250 aatctttcttgatatatagcattgctct 30563223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 8e-44; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 8e-44
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 3362866 - 3362777
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3362866 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 3362777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 8e-44
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 38899703 - 38899792
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38899703 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 38899792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 7e-41
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 12850889 - 12850801
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12850889 atttcttgataaaatctaagggtggttattctgccatgtcatttttggaattttcttgataaaatctttcttgatatatagcattgctc 12850801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 2477724 - 2477635
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  2477724 atttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctct 2477635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 6043488 - 6043577
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6043488 atttcttgataaaatctaagggtgattattcttccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctct 6043577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 11361108 - 11361196
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    |||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  11361108 atttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 11361196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 22913028 - 22913119
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||    
T  22913028 acaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaatttttcttgaaaaaatctttcttgatatatagcattgctc 22913119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 4892290 - 4892201
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||    
T  4892290 atttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctct 4892201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 8145463 - 8145374
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||    
T  8145463 atttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattcctct 8145374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 25398326 - 25398238
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    |||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||    
T  25398326 atttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctc 25398238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 7e-32
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 14138756 - 14138667
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    ||||||||||||||| |||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  14138756 atttcttgataaaatttaagggtgattattctgccatgtaattcttgaaattttcttgataaaatctttcttgatatataacattgctct 14138667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 3e-31
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 4433984 - 4434072
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||| | |||||||||||||||||||||||||||||    
T  4433984 atttcttgataaaatctaagggtgattattctgccatatcattcttgaaattttcttaaaaaaatctttcttgatatatagcattgctc 4434072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 3e-31
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 33584306 - 33584394
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||    
T  33584306 atttcttgataaaatttaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctc 33584394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 6e-29
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 3521983 - 3522071
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    ||||||||||||||||||| |||| |||||||||||||||||| ||| ||||||||||| |||||||||||||||||||| ||||||||    
T  3521983 atttcttgataaaatctaatggtgattattctgccatgtcatttttgaaattttcttgaaaaaatctttcttgatatataacattgctc 3522071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 12614707 - 12614798
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    ||||||||||||||||||||||||||| ||||| || ||||||||||||| |  |||||||||||||| |||||||||||||||||||||||    
T  12614707 acaatttcttgataaaatctaagggtgattattatgtcatgtcattcttgaatctttcttgataaaatatttcttgatatatagcattgctc 12614798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 17545659 - 17545750
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||| | ||||||||| ||| | |||||||||||||||||||||||    
T  17545659 acaatttcttgataaaatctaatggtgattattctgccatgtcattcttgaatttttcttgagaaattttttcttgatatatagcattgctc 17545750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 4e-27
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 37321770 - 37321859
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttctt-gatatatagcattgctc 96  Q
    |||| |||||||||| |||||||| |||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||    
T  37321770 atttattgataaaatttaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttagatatatagcattgctc 37321859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 4e-21
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 31640914 - 31640977
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgata 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||    
T  31640914 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttgaatctttcttgata 31640977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 12850996 - 12851068
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||||||||| |||||||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  12850996 aaatctaaaggtggttattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 12851068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 38899597 - 38899524
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||||||||| |||||||||||||||| | |||| || |||||||| |||||||||| |||||||    
T  38899597 aaatctaaaggtggttattgtgccatgtcattcttgaatttttttttataaaatcattcttgatatctagcatt 38899524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 4892396 - 4892468
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  4892396 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 4892468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 22912928 - 22912856
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    ||||||||||||| ||||| |||||||||||||||| |  ||||||||| ||||| |||||||||| |||||||    
T  22912928 aaatctaagggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcatt 22912856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 33584200 - 33584128
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  33584200 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 33584128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 10458465 - 10458409
Alignment:
Q  28 ggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatat 84  Q
    |||| ||||| |||||||||||||||| | ||||||||||||||| |||||||||||    
T  10458465 ggtgattattttgccatgtcattcttgaatttttcttgataaaatttttcttgatat 10458409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 27481881 - 27481830
Alignment:
Q  41 ccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||||||||| | |||||||||||||||||||||| ||| ||||||||    
T  27481881 ccatgtcattcttgaatttttcttgataaaatctttcttaatacatagcatt 27481830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 3362973 - 3363045
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||||||||| || ||||||||||||  | ||||||| |||||||| |||||||||| |||||||    
T  3362973 aaatctaaaggtggttattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 3363045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 3521878 - 3521806
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||||||  | ||||||| |||||||| |||||||||| |||||||    
T  3521878 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 3521806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 6043383 - 6043311
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||||||  | ||||||| |||||||| |||||||||| |||||||    
T  6043383 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 6043311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 8145567 - 8145639
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||||||| |  |||||| |||||||| |||||||||| |||||||    
T  8145567 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 8145639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 25398432 - 25398504
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||| ||| | ||||||| |||||||| |||||||||| |||||||    
T  25398432 aaatctaaaggtgattattgtgccatgtcattgttgaatttttctt-ataaaatcattcttgatatctagcatt 25398504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 97
Target Start/End: Complemental strand, 13664679 - 13664641
Alignment:
Q  59 tttcttgataaaatctttcttgatatatagcattgctct 97  Q
    ||||||||||||||||||||| ||||||| |||||||||    
T  13664679 tttcttgataaaatctttcttaatatataacattgctct 13664641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 2477830 - 2477902
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| | ||| ||||||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  2477830 aaatctaaaggtgatcattgtgccatgtcattcttagatctttctt-ataaaatcattcttgatatctagcatt 2477902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 12614609 - 12614536
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||||||  |  ||| ||||||||||| | |||||||| |||||||    
T  12614609 aaatctaaaggtgattattgtgccatgtcattcttaaatcttttttgataaaatcatacttgatatctagcatt 12614536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 14138861 - 14138933
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||||||| |  |||||| |||||||| ||||| |||| |||||||    
T  14138861 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 14138933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 70 - 97
Target Start/End: Original strand, 31640964 - 31640991
Alignment:
Q  70 aatctttcttgatatatagcattgctct 97  Q
    ||||||||||||||||||||||||||||    
T  31640964 aatctttcttgatatatagcattgctct 31640991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 3e-40; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 3e-40
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 34665473 - 34665382
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  34665473 acaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 34665382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 5e-39
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 32064833 - 32064744
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  32064833 atttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctct 32064744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 17841827 - 17841916
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  17841827 atttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctct 17841916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 40780106 - 40780195
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  40780106 atttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctct 40780195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 42755019 - 42755108
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  42755019 atttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatatcattgctct 42755108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 20091778 - 20091866
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  20091778 atttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcattgctc 20091866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 1645942 - 1646031
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||    
T  1645942 atttcttgataaaatctaagggtgattattctgccatgtctttcttaaaattttcttgataaaatctttcttgatatatagcattgctct 1646031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 15187648 - 15187559
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  15187648 atttcttgataaaatctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcattgctct 15187559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 24211530 - 24211618
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    ||||||||||||||| |||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  24211530 atttcttgataaaatttaagggtgattattctgccatgccattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 24211618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 31347756 - 31347848
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||| ||||| ||||||||||||||||||||||||    
T  31347756 acaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatatttcttgatatatagcattgctct 31347848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 32393946 - 32393858
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  32393946 atttcttgataaaatttaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 32393858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 35353129 - 35353041
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    |||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||    
T  35353129 atttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctc 35353041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 14128952 - 14128865
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgct 95  Q
    |||||||||||||||||||||||| |||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||    
T  14128952 atttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcattgct 14128865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 7e-32
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 37986032 - 37986121
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||| ||||    
T  37986032 atttcttgataaaatctaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcattactct 37986121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 3e-31
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 39772778 - 39772874
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctctgttattt 104  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||| |||||||||||||| ||||||||| ||||||    
T  39772778 attttttgataaaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatatttcttgatatataacattgctcttttattt 39772874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 4e-30
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 27782091 - 27782181
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgct 95  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||| |  |||||||||||||| ||||||||||||||||||||||    
T  27782091 acaatttcttgataaaatctaagggtgattattctgccatgtcattattgaatctttcttgataaaatatttcttgatatatagcattgct 27782181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 6108210 - 6108299
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||  ||||||||| | |||||||||||||||||||| |||||||||    
T  6108210 atttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatatataacattgctct 6108299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 8 - 93
Target Start/End: Complemental strand, 8453922 - 8453837
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattg 93  Q
    |||||||||||||||||||||||| ||||| || ||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  8453922 atttcttgataaaatctaagggtgattattttgtcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattg 8453837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 6e-29
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 7017839 - 7017931
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||| | ||||||| | |||||||||| |||||||||||||||||||    
T  7017839 acaatttcttgataaaatctaaggatgattattctgccatgtcattcttgaatttttcttaagaaaatctttcatgatatatagcattgctct 7017931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 6e-29
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 41819752 - 41819844
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||  ||  |||||||||||||||||||||||||||| |||||||||    
T  41819752 acaatttcttgataaaatctaagggtgattattctgccatatcattcttaaaacattcttgataaaatctttcttgatatataacattgctct 41819844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 26042103 - 26042182
Alignment:
Q  18 aaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  26042103 aaaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttaatatatagcattgctct 26042182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 30835021 - 30835111
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||| | ||||||||||||||||||||||| ||||||||    
T  30835021 acaatttcttgataaaatcaaagggtgattattctgccatgtcattctt-gaattttttcgataaaatctttcttgatatataacattgctc 30835111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 4e-27
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 7022069 - 7021988
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatat 86  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||| | ||||||||| |||||||||||||||||||    
T  7022069 acaatttcttgataaaatctaagggtgattattctgccatatcattcttgaatttttcttgagaaaatctttcttgatatat 7021988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 38017047 - 38016979
Alignment:
Q  20 aatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatag 88  Q
    |||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  38017047 aatccaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatag 38016979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 25581216 - 25581299
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcat 91  Q
    ||||||||||||||||||| |||| ||||| |||||||||||||||| |||||||||  ||||| |||||||||||||||||||    
T  25581216 atttcttgataaaatctaaaggtgattattttgccatgtcattcttgaaattttcttcgtaaaaactttcttgatatatagcat 25581299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 24844833 - 24844924
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    ||||||||||||||||||||||||||| ||||| || ||||||||||||| | ||||||| ||||||| ||||||||||| ||||||| ||||    
T  24844833 acaatttcttgataaaatctaagggtgattatt-tgtcatgtcattcttgaatttttcttaataaaatatttcttgatatgtagcatttctct 24844924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 9e-19
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 27835427 - 27835518
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    ||||||| || ||||||||||||| || ||||| | |||||||||||||| | ||||||| |||| |||||| |||||||||||||||||||    
T  27835427 acaattttttaataaaatctaaggatgattattttaccatgtcattcttgaatttttcttaataagatctttattgatatatagcattgctc 27835518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 3597018 - 3597078
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgata 68  Q
    |||||||||||||||||||||||  |||||||||||||||||||||| || ||||||||||    
T  3597018 atttcttgataaaatctaagggtaattattctgccatgtcattcttgaaactttcttgata 3597078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 37132651 - 37132723
Alignment:
Q  24 taagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    ||||| || |||||||||||||||||||||  | ||||||||||||||| ||| |||||||||||||||||||    
T  37132651 taaggatgattattctgccatgtcattcttaaatttttcttgataaaatattttttgatatatagcattgctc 37132723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 3890488 - 3890413
Alignment:
Q  17 taaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||||| |||| |||||||||||| ||||||||| |  ||||||||||||||| |||||||||| |||||||    
T  3890488 taaaatctaatggtgattattctgccatatcattcttgaatctttcttgataaaatcattcttgatatctagcatt 3890413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 3890591 - 3890653
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgata 68  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||| | |||||||||||    
T  3890591 acaatttcttgataaaatctaagg-tgattattctgccatgtcattcttgaatttttcttgata 3890653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 15972850 - 15972899
Alignment:
Q  4 aacaatttcttgataaaatctaagggtggttattctgccatgtcattctt 53  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  15972850 aacaatttcttgataaaatctaagggtgattattctgtcatgtcattctt 15972899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 30834927 - 30834862
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatat 84  Q
    |||||||||||||||||||||| ||||||||||||  |  ||||||||||||||| ||||||||||    
T  30834927 aaatctaagggtggttattctgtcatgtcattctttaatctttcttgataaaatcattcttgatat 30834862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 1503714 - 1503642
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  1503714 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 1503642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 17841721 - 17841649
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  17841721 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 17841649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 20091672 - 20091600
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    ||||||||||||| ||||| |||||||||||||||| |  |||||| |||||||| |||||||||| |||||||    
T  20091672 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 20091600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 24211243 - 24211171
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  24211243 aaatctaaaggtgattattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatatctagcatt 24211171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 26041984 - 26041912
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  26041984 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 26041912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 34665575 - 34665647
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    ||||||||||||| ||||| |||||||||||||||| |  |||||| |||||||| |||||||||| |||||||    
T  34665575 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 34665647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 37132552 - 37132479
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    ||||||||||||| ||||| || |||||||||| || |  ||||||||||||||| |||||||||| |||||||    
T  37132552 aaatctaagggtgattattgtgtcatgtcattcatgaatctttcttgataaaatcattcttgatatctagcatt 37132479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 40780000 - 40779928
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  40780000 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 40779928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 1645835 - 1645763
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||||||||   |||||| |||||||| |||||||||| |||||||    
T  1645835 aaatctaaaggtgattattgtgccatgtcattcttggttctttctt-ataaaatcattcttgatatctagcatt 1645763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 3817914 - 3817967
Alignment:
Q  15 gataaaatctaagggtggttattctgccatgtcattcttggaattttcttgata 68  Q
    ||||||||||||||||| |||||||| ||||| ||||||| | |||||||||||    
T  3817914 gataaaatctaagggtgattattctgtcatgtaattcttgaatttttcttgata 3817967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 6108104 - 6108032
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| || ||||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  6108104 aaatctaaaggtgattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 6108032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 10044542 - 10044614
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||||||| |  |||||| |||||||| |||||||||| |||||||    
T  10044542 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 10044614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 14129053 - 14129125
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||||||| |  |||||| |||||||| |||||||||| |||||||    
T  14129053 aaatctaaaggtgattattgtgccatgtcattcttgaatatttctt-ataaaatcattcttgatatctagcatt 14129125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 15187754 - 15187826
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| ||| ||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  15187754 aaatctaaaggtgattattgtgctatgtcattcttggatctttctt-ataaaatcattcttgatatctagcatt 15187826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 31347647 - 31347575
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||||||| |  ||||||||| ||||| |||||||||| |||||||    
T  31347647 aaatctaaaggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcatt 31347575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 37985927 - 37985855
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||||||| |  |||||| |||||||| |||||||||| |||||||    
T  37985927 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 37985855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 35353233 - 35353300
Alignment:
Q  17 taaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatata 85  Q
    |||||| ||| |||| ||||| |||||||||||||||| | ||||||| |||||||| |||||||||||    
T  35353233 taaaatttaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatata 35353300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 1886621 - 1886672
Alignment:
Q  33 ttattctgccatgtcattcttggaattttcttgataaaatctttcttgatat 84  Q
    ||||||||||| |||||||||| |  ||||||||||||||| ||||||||||    
T  1886621 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 1886672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 30055708 - 30055782
Alignment:
Q  17 taaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    ||||||||||||||| ||||| || ||||||||||||| |  |||||| |||||||| ||||| |||| |||||||    
T  30055708 taaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 30055782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 30055616 - 30055543
Alignment:
Q  16 ataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    ||||||| |||||||| ||||||||||||       ||| |||||| ||||||||||||| |||| |||||||||||||||    
T  30055616 ataaaatttaagggtgattattctgccat-------ttgaaatttttttgataaaatcttccttggtatatagcattgctc 30055543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 25581110 - 25581038
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| ||  |||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  25581110 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 25581038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 32064940 - 32065012
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| || ||||||||||||  | ||||||| |||||||| |||||||||| |||||||    
T  32064940 aaatctaaaggtgattattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 32065012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 39772673 - 39772609
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatat 84  Q
    |||||||| |||| ||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  39772673 aaatctaaaggtgattattgtgtcatgtcattcttggatctttctt-ataaaatcattcttgatat 39772609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 42754913 - 42754841
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| | |||||||||||||  | ||||||| |||||||| |||||||||| |||||||    
T  42754913 aaatctaaaggtgattattgtaccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 42754841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 99 - 142
Target Start/End: Original strand, 7172917 - 7172960
Alignment:
Q  99 ttatttaatatcattctatttaactacttcattaactacaatta 142  Q
    ||||| ||| |||||| | |||||||||||||||||||||||||    
T  7172917 ttattgaatttcattcaacttaactacttcattaactacaatta 7172960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 24844734 - 24844667
Alignment:
Q  17 taaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatat 84  Q
    ||||||||||| ||| ||||| ||||||| |||||||  |  ||||||||||||||| || |||||||    
T  24844734 taaaatctaagagtgattattttgccatgccattcttaaatctttcttgataaaatcattattgatat 24844667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 5e-39; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 5e-39
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 4974711 - 4974800
Alignment:
Q  7 aatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4974711 aatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 4974800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 5e-39
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 45637800 - 45637711
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  45637800 atttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctct 45637711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 42611899 - 42611811
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  42611899 atttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 42611811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 15329361 - 15329272
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  15329361 atttcttgataaaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctct 15329272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 15577828 - 15577916
Alignment:
Q  9 tttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  15577828 tttcttgataaagtctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctct 15577916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 48880904 - 48880992
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  48880904 atttcttgataaaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 48880992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 35444646 - 35444557
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||    
T  35444646 atttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttaatatatagcattgctct 35444557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 34482923 - 34482835
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    |||||||||||||||||||||||| |||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||    
T  34482923 atttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttaataaaatctttcttgatatatagcattgctc 34482835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 3e-31
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 3962067 - 3961979
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    ||||||||||||||| |||||||| |||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  3962067 atttcttgataaaatttaagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 3961979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 3e-31
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 24395060 - 24394972
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    |||| |||||||||||||| ||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  24395060 attttttgataaaatctaaaggttgttattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 24394972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 6e-29
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 25167827 - 25167915
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    ||||||||||||||||||||| || |||||||||||||||||||||  ||||||||| | |||||||||||||||||||||||||||||    
T  25167827 atttcttgataaaatctaaggatgattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatatatagcattgctc 25167915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 6e-29
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 37477054 - 37477146
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||| ||||| || |||||||||||||||||||||  | ||||||||| ||||||||||||||||||||||||||||||    
T  37477054 acaatttcttgataaaatttaaggatgattattctgccatgtcattcttaaatttttcttgagaaaatctttcttgatatatagcattgctct 37477146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 15238473 - 15238382
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||| | ||||||||| ||| | |||||||||||||||||||||||    
T  15238473 acaatttcttgataaaatctaatggtgattattctgccatgtcattcttgaatttttcttgagaaattttttcttgatatatagcattgctc 15238382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 20010072 - 20010162
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    ||||||| ||||||||||||||||||| ||||||||  |||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  20010072 acaattttttgataaaatctaagggtgattattctgt-atgtcattcttgaaatttttttgataaaatctttcttgatatatagcattgctc 20010162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 4e-27
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 36790439 - 36790528
Alignment:
Q  4 aacaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattg 93  Q
    ||||||||||||||||||| |||||||  |||||||||||||||||||||  | |||||||||||||| |||||||||||||||||||||    
T  36790439 aacaatttcttgataaaatttaagggtaattattctgccatgtcattcttaaatttttcttgataaaaactttcttgatatatagcattg 36790528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 18037069 - 18036977
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    ||||||| |||||||||| |||||||| |||||||||||||||||||||  | ||||||||| |||||||||||||||||||| |||||||||    
T  18037069 acaattttttgataaaatttaagggtgattattctgccatgtcattcttaaatttttcttgaaaaaatctttcttgatatatatcattgctct 18036977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 29737230 - 29737143
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||||| |||||||||||||||| ||||||| |||||||||||||  ||||||||| | |||||||||||||||||||||||||    
T  29737230 acaatttcttaataaaatctaagggtgattattctaccatgtcattcttaaaattttcttaaaaaaatctttcttgatatatagcatt 29737143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 42696174 - 42696082
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||| |||||||| ||||||||| |||||||||||  ||  || || |||||||||||||||||||||| |||||||||    
T  42696174 acaatttcttgataaaatataagggtgattattctgctatgtcattcttaaaaaatttttaataaaatctttcttgatatataacattgctct 42696082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 30848657 - 30848597
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgata 68  Q
    ||||||||||||||||||||| || |||||||||||||||||||||  |||||||||||||    
T  30848657 atttcttgataaaatctaaggatgattattctgccatgtcattcttaaaattttcttgata 30848597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 3962172 - 3962244
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  3962172 aaatctaaaggtgattattgtgccatgtcattcttggatatttctt-ataaaatcattcttgatatctagcatt 3962244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 4974606 - 4974534
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    ||||||||||||| ||||| ||||||||||||||| |||| || || |||||||| |||||||||| |||||||    
T  4974606 aaatctaagggtgattattgtgccatgtcattctt-gaatcttttttataaaatcattcttgatatctagcatt 4974534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 25167727 - 25167655
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  25167727 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 25167655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 40880768 - 40880831
Alignment:
Q  7 aatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaa 70  Q
    |||||||| ||||||| ||||| || ||||||||||||||||||||||   |||||||||||||    
T  40880768 aatttcttcataaaatttaaggatgattattctgccatgtcattcttgagtttttcttgataaa 40880831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 15577718 - 15577646
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  15577718 aaatctaaaggtgattattgtgacatgtcattcttggatctttctt-ataaaatcattcttgatatctagcatt 15577646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 24395165 - 24395237
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| ||||||||||||||| |||| || || |||||||| |||||||||| |||||||    
T  24395165 aaatctaaaggtgattattgtgccatgtcattctt-gaatcttttttataaaatcattcttgatatctagcatt 24395237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 42612005 - 42612077
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  42612005 aaatctaaaggtgattattgtgccatgtcattcttagatctttctt-ataaaatcattcttgatatctagcatt 42612077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 42696277 - 42696342
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatat 84  Q
    ||||||||||||| ||||| | |||||||||||||| | |||| ||||||||||| || |||||||    
T  42696277 aaatctaagggtgattattgtaccatgtcattcttgaattttttttgataaaatcattattgatat 42696342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 48880798 - 48880726
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    ||||||||  ||| ||||| |||||||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  48880798 aaatctaaatgtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 48880726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 29737338 - 29737403
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatat 84  Q
    ||||||||||||| ||||| || ||||| ||||||  |  ||||||||||||||| ||||||||||    
T  29737338 aaatctaagggtgattattgtgacatgttattcttaaatctttcttgataaaatcattcttgatat 29737403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 30848763 - 30848835
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||| ||| |||| ||||| |||||||||||||||| | ||||||| |||||| | |||||||||| |||||||    
T  30848763 aaatttaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaagcattcttgatatctagcatt 30848835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 34483032 - 34483096
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatat 84  Q
    |||||||| |||| ||||| |||||||||||||||| |  |||||| |||||||| ||||||||||    
T  34483032 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 34483096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 35876438 - 35876510
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||| || ||  |||||| |||||||| |||||||||| |||||||    
T  35876438 aaatctaaaggtgattattgtgccatgtcatttttagatatttctt-ataaaatcattcttgatatctagcatt 35876510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 37476951 - 37476879
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    ||||||||||||| ||||| |||||||||||| ||  |  ||||||||| ||||| |||||||||| |||||||    
T  37476951 aaatctaagggtgattattgtgccatgtcattattaaatctttcttgat-aaatcattcttgatatctagcatt 37476879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 45637905 - 45637977
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||||||| |  |||||| |||||||| ||||| |||| |||||||    
T  45637905 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 45637977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 5e-39; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 5e-39
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 33695304 - 33695393
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33695304 atttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctct 33695393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 5e-39
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 33696784 - 33696695
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33696784 atttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctct 33696695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 6127363 - 6127274
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  6127363 atttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctct 6127274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 23291061 - 23291150
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  23291061 atttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctct 23291150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 28675239 - 28675147
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    ||||||||||||||||||||||||||| |||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  28675239 acaatttcttgataaaatctaagggtgattattccgacatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctct 28675147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 17705439 - 17705530
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  17705439 acaatttcttgataaaatctaagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 17705530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 18365550 - 18365639
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  18365550 atttcttgataaaatttaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcattgctct 18365639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 18370814 - 18370903
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  18370814 atttcttgataaaatttaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcattgctct 18370903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 17175998 - 17176086
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  17175998 atttcttgataaaatctaagggtgattattctgtcatgtcattcttgaaattttattgataaaatctttcttgatatatagcattgctc 17176086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 11548562 - 11548647
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagca 90  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||| ||||| |||||||||||||||||    
T  11548562 acaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatttttcttgatatatagca 11548647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 6e-29
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 25987018 - 25986930
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    ||||||||||||||| |||| ||| ||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  25987018 atttcttgataaaatttaagagtgattattttgccatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 25986930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 4e-27
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 18889683 - 18889763
Alignment:
Q  17 taaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctctg 98  Q
    ||||||||||||||  |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  18889683 taaaatctaagggttattattctgccatgtcattcttgaaattttcttgat-aaatctttcttgatatatagcattgctctg 18889763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 6031718 - 6031806
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    ||||||||||||||| |||||||| |||||||| ||||||||||||  |||||| ||||| ||||||||||||||||||||||||||||    
T  6031718 atttcttgataaaatttaagggtgattattctgtcatgtcattcttaaaattttattgatgaaatctttcttgatatatagcattgctc 6031806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 32702293 - 32702216
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatata 85  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||| ||||||| ||| ||||||||||||||||||    
T  32702293 atttcttgataaaatctaagggtgattattctgccatatcattcttgaaattttcatgaaaaaatctttcttgatata 32702216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 2309397 - 2309489
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||  ||   | ||||||||||||||||||||||||| |||||||||    
T  2309397 acaatttcttgataaaatctaagggtgattattctgccatgccattcttaaaaaaattttgataaaatctttcttgatatataacattgctct 2309489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 9752219 - 9752310
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||| |||||||||||||||| |||||||||||| ||||||||| | |||||||||| || | |||||||||||||| |||||||||    
T  9752219 acaatttcttaataaaatctaagggtgattattctgccatatcattcttgaatttttcttgat-aattttttcttgatatataacattgctct 9752310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 5 - 93
Target Start/End: Original strand, 8515700 - 8515787
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattg 93  Q
    ||||||||||||||||||| || | || |||||||||||||||||||||  |  | |||||||||||||||||||||||||||||||||    
T  8515700 acaatttcttgataaaatcaaatg-tgattattctgccatgtcattcttaaatctgtcttgataaaatctttcttgatatatagcattg 8515787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 29693639 - 29693712
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    ||||||||||||  |||||||||||||||||||||  |  ||||||||||||||| |||||||||| |||||||    
T  29693639 aaatctaagggtcattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctagcatt 29693712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 11548460 - 11548388
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    ||||||||||||| ||||| |||||||||||||||| |   |||||||| ||||| |||||||||| |||||||    
T  11548460 aaatctaagggtgattattgtgccatgtcattcttgaatcgttcttgat-aaatcattcttgatatctagcatt 11548388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 18365445 - 18365373
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| ||| ||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  18365445 aaatctaaaggtgattattgtgctatgtcattcttggatctttctt-ataaaatcattcttgatatctagcatt 18365373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 18370709 - 18370637
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| ||| ||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  18370709 aaatctaaaggtgattattgtgctatgtcattcttggatctttctt-ataaaatcattcttgatatctagcatt 18370637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 28675342 - 28675414
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    ||||||||||||| ||||| || ||||||||||||| |  |||||| |||||||| |||||||||| |||||||    
T  28675342 aaatctaagggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 28675414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 34238944 - 34238886
Alignment:
Q  33 ttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    ||||| || ||||||||||||| ||| |||||||||||||| |||||||||| |||||||    
T  34238944 ttattgtgtcatgtcattcttg-aatcttcttgataaaatcattcttgatatctagcatt 34238886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 2309294 - 2309222
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    ||||||||||||| ||||| |||||||||||||||| |  |||||| |||||||| |  ||||||| |||||||    
T  2309294 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatcgttgatatctagcatt 2309222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 17175892 - 17175820
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| | |||||||||||||| |  |||||| |||||||| |||||||||| |||||||    
T  17175892 aaatctaaaggtgattattgtaccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 17175820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 32702399 - 32702471
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||  ||||| || ||||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  32702399 aaatctaaaggtaattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 32702471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 33696891 - 33696963
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||||||  |  |||||| |||||||| |||||||||| |||||||    
T  33696891 aaatctaaaggtgattattgtgccatgtcattcttaaatctttctt-ataaaatcattcttgatatctagcatt 33696963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 2e-38; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 9293550 - 9293642
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  9293550 acaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaaatttcttgataaaatctttcttgatatatagcattgctct 9293642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 23268039 - 23268128
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  23268039 atttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctct 23268128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 35160845 - 35160756
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  35160845 atttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctct 35160756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 21936169 - 21936081
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  21936169 atttcttgataaaatctaagggtgattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 21936081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 10661975 - 10661888
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgct 95  Q
    |||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  10661975 atttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgct 10661888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 14941340 - 14941432
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| |  |||||| ||||||||||||||||||||||||||||||||    
T  14941340 acaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaatctttcttaataaaatctttcttgatatatagcattgctct 14941432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 43331003 - 43330911
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| | |||| |||| ||||||||||||||||||||||||||||||    
T  43331003 acaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaattttttttgagaaaatctttcttgatatatagcattgctct 43330911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 7e-32
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 7475485 - 7475574
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| |||||||  ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  7475485 atttcttgataaaatctaagggtgattattctatcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctct 7475574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 7e-32
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 13354934 - 13354845
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  13354934 atttcttgataaaatctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatataacattgctct 13354845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 7e-32
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 31174811 - 31174896
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattg 93  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||    
T  31174811 atttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttaataaaatctttcttgatatataacattg 31174896  T

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Target: chr2; HSP #11
Raw Score: 69; E-Value: 3e-31
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 33380295 - 33380207
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||    
T  33380295 atttcttgataaaatctaagggtgattattcagccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctc 33380207  T

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Target: chr2; HSP #12
Raw Score: 62; E-Value: 4e-27
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 21393662 - 21393751
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgc 94  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||  | ||||||||| ||||| |||||||||||||||||||||    
T  21393662 acaatttcttgataaaatctaagggtgattattctaccatgtcattcttaaatttttcttgagaaaatttttcttgatatatagcattgc 21393751  T

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Target: chr2; HSP #13
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 9723496 - 9723405
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    |||||||||||||||||| |||||||| |||||||| ||||||||||||  |  |||||| |||||||||||||| ||||||||||||||||    
T  9723496 acaatttcttgataaaatttaagggtgattattctgtcatgtcattcttaaatctttcttaataaaatctttcttaatatatagcattgctc 9723405  T

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Target: chr2; HSP #14
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 27847723 - 27847631
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    ||||||| |||||||||||||| |||| |||||||| ||||||||||||| |  |||||| |||||||||||||| ||||| |||||||||||    
T  27847723 acaattttttgataaaatctaacggtgattattctgtcatgtcattcttgaatctttcttaataaaatctttctttatatacagcattgctct 27847631  T

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Target: chr2; HSP #15
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 3989164 - 3989104
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgata 68  Q
    |||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||    
T  3989164 atttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttgata 3989104  T

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Target: chr2; HSP #16
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 22591573 - 22591494
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatat 84  Q
    |||||||||| ||||||| |||||| | |||||||||||| ||||||||| | |||| || |||||||||||||||||||    
T  22591573 acaatttcttaataaaatttaagggggattattctgccatatcattcttgaattttttttaataaaatctttcttgatat 22591494  T

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Target: chr2; HSP #17
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 22592905 - 22592979
Alignment:
Q  18 aaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||||||||| ||||| || ||||||||||||| |  ||||||||||||||| |||||||||| |||||||    
T  22592905 aaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcatt 22592979  T

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Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 33380401 - 33380473
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  33380401 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 33380473  T

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Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 35160953 - 35161025
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  35160953 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 35161025  T

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Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 9293446 - 9293374
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    ||||||||||||| ||||| || ||||||||||||| |  |||||| |||||||| |||||||||| |||||||    
T  9293446 aaatctaagggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 9293374  T

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Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 10662082 - 10662154
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| || ||||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  10662082 aaatctaaaggtgattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 10662154  T

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Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 13355042 - 13355114
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    ||||||||  ||| ||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  13355042 aaatctaaaagtgattattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatatctagcatt 13355114  T

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Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 21393556 - 21393485
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||| |||||||| ||||| || |||||||||||| ||||||||||||| ||||| |||||||||| |||||||    
T  21393556 aaatttaagggtgattattgtgtcatgtcattctt-gaattttcttgat-aaatcattcttgatatctagcatt 21393485  T

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Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 23267933 - 23267861
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||||||  | ||||||| |||||||| |||||||||| |||||||    
T  23267933 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 23267861  T

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Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 37335805 - 37335755
Alignment:
Q  4 aacaatttcttgataaaatctaagggtggttattctgccatgtcattcttg 54  Q
    |||||||| |||||| |||||||  ||| ||||||||||||||||||||||    
T  37335805 aacaattttttgatacaatctaaaagtgattattctgccatgtcattcttg 37335755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 93
Target Start/End: Original strand, 40262714 - 40262748
Alignment:
Q  59 tttcttgataaaatctttcttgatatatagcattg 93  Q
    ||||||||||||||||||||||||||||| |||||    
T  40262714 tttcttgataaaatctttcttgatatataacattg 40262748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 3989270 - 3989342
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||  ||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  3989270 aaatctaaaggttattattgtgtcatgtcattcttggatctttctt-ataaaatcattcttgatatctagcatt 3989342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 9723600 - 9723665
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatat 84  Q
    |||||||| |||| |||||||| ||||||||||||  |  ||||||||| ||||| ||||||||||    
T  9723600 aaatctaaaggtgattattctgtcatgtcattcttaaatatttcttgatcaaatcattcttgatat 9723665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 43331106 - 43331178
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| | |||||||||||||| |  ||||||||| ||||| |||||||||| |||||||    
T  43331106 aaatctaaaggtgattattgtaccatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcatt 43331178  T

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Target: chr2; HSP #30
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 34321028 - 34320993
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttg 54  Q
    ||||||||||||| ||||| ||||||||||||||||    
T  34321028 aaatctaagggtgattattgtgccatgtcattcttg 34320993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 2e-38; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 40215076 - 40214988
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  40215076 atttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 40214988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 16045775 - 16045864
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  16045775 atttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattactct 16045864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 44094786 - 44094698
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  44094786 atttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcattgctc 44094698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 32000241 - 32000332
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||| |||||||||||||||||||||||||||||    
T  32000241 acaatttcttgataaaatctaagggtggttattctgtcatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcattgctc 32000332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 19015492 - 19015403
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  19015492 atttcttgataaaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctct 19015403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 25463764 - 25463675
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||    
T  25463764 atttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttcataaaatctttcttgatatatagcattgctct 25463675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 9910270 - 9910358
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    ||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  9910270 atttcttgataaaatctaaggttgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 9910358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 36966685 - 36966773
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  36966685 atttcttgataaaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 36966773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 37821811 - 37821899
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  37821811 atttcttgataaaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 37821899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 7e-32
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 18404530 - 18404441
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    ||||||||||||||||||| |||| ||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  18404530 atttcttgataaaatctaaaggtgattattctaccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctct 18404441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 3e-31
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 6883575 - 6883487
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| | |||||||||||| ||||||||||||||||    
T  6883575 atttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttaaaaaaatctttcttaatatatagcattgctc 6883487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 8 - 93
Target Start/End: Complemental strand, 3559705 - 3559620
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattg 93  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||    
T  3559705 atttcttgataaaatttaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcattg 3559620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 25973501 - 25973413
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||| ||||||| |||||||||||||||||||||||| |||||||||    
T  25973501 atttcttgataaaatctaagggtgattattctgcc-tgtcattcttgaaattttcatgataaaatctttcttgatatataacattgctct 25973413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 41876419 - 41876508
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||  |||||| |||| ||||||||||||||||||||||||||||||    
T  41876419 atttcttgataaaacctaagggtgattattctgccatgtcattcttaaaatttttttgaaaaaatctttcttgatatatagcattgctct 41876508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 40273793 - 40273701
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||| |||||||||||||||| ||||| || ||||||||||||| | ||||||||| ||||||||||||||||| ||||||||||||    
T  40273793 acaatttcttaataaaatctaagggtgattattttgacatgtcattcttgaatttttcttgaaaaaatctttcttgatatctagcattgctct 40273701  T

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Target: chr1; HSP #16
Raw Score: 52; E-Value: 4e-21
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 27523229 - 27523323
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttga--tatatagcattgctct 97  Q
    |||||||||||||||||| |||||||| |||||||| ||||||||||||  | |||||||||||||||  |||||||  ||||||||||||||||    
T  27523229 acaatttcttgataaaatttaagggtgattattctgtcatgtcattcttaaatttttcttgataaaattgttcttgatgtatatagcattgctct 27523323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 9e-19
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 33786609 - 33786695
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||||||||||||| |||||||| ||||| |||||||||||||||| |  ||||||||| ||||| |||||||||| |||||||    
T  33786609 acaatttcttgataaaatttaagggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcatt 33786695  T

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Target: chr1; HSP #18
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 44691005 - 44691094
Alignment:
Q  7 aatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    ||||||||||||||||||||| ||  |||||||||||||| ||||||| |  ||| || |||||||||||||||||||| | ||||||||    
T  44691005 aatttcttgataaaatctaagagttattattctgccatgtaattcttgaatctttttttataaaatctttcttgatatacaacattgctc 44691094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 34519849 - 34519757
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    ||||||| ||||||||||||||||  | ||||||| | ||| |||| ||| |  |||||| ||||||||||||||||||||||||||||||||    
T  34519849 acaattttttgataaaatctaaggtcgattattcttctatggcatttttgaatctttcttaataaaatctttcttgatatatagcattgctct 34519757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 44690892 - 44690828
Alignment:
Q  20 aatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatat 84  Q
    |||||||||||| |||||||||||||||||||||| |  ||||||||||||||| || |||||||    
T  44690892 aatctaagggtgattattctgccatgtcattcttgaatctttcttgataaaatcattattgatat 44690828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 51737593 - 51737510
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    ||||||||||||||| |||||||| |||||||||| | ||||||||  ||||||||||     | ||||||||||||||||||||||||    
T  51737593 atttcttgataaaatttaagggtgattattctgccttatcattcttaaaattttcttg-----aactttcttgatatatagcattgctc 51737510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 19015598 - 19015670
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  19015598 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatgtagcatt 19015670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 25463870 - 25463942
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  25463870 aaatctaaaggtgattattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatatctagcatt 25463942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 32000137 - 32000065
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    ||||||||||||| ||||| |||||||||||||||| |  ||||||||| ||||| |||||||||| |||||||    
T  32000137 aaatctaagggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcatt 32000065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 33786502 - 33786430
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    ||||||||||||| ||||| |||||||||||||||| |  ||||||||| ||||| |||||||||| |||||||    
T  33786502 aaatctaagggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcatt 33786430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 40273902 - 40273974
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    ||||||||||||| ||||| |||||||||||||||| |  ||||||||| ||||| |||||||||| |||||||    
T  40273902 aaatctaagggtgattattgtgccatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 40273974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 51737699 - 51737771
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  51737699 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 51737771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 59 - 97
Target Start/End: Complemental strand, 51621017 - 51620979
Alignment:
Q  59 tttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  51621017 tttcttaataaaatctttcttgatatatagcattgctct 51620979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 6883681 - 6883753
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| ||||  |||| |||||||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  6883681 aaatctaaaggtgaatattatgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 6883753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 9910162 - 9910098
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatat 84  Q
    |||||||| |||| ||||| |||||||||||||||| | ||||||| |||||||| ||||||||||    
T  9910162 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 9910098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 20305001 - 20304929
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||||||| |  |||||| |||||||| |||||||||| |||||||    
T  20305001 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 20304929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 37821705 - 37821633
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| || ||||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  37821705 aaatctaaaggtgattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 37821633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 40215182 - 40215254
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||||||| |  |||||| |||||||| |||||||||| |||||||    
T  40215182 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 40215254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 41876313 - 41876241
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| ||| |||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  41876313 aaatctaaaggtgattattgtgctatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 41876241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 52064445 - 52064376
Alignment:
Q  23 ctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||||  ||||||| ||||||||||||| |  ||||||||||||||| || ||||||| |||||||    
T  52064445 ctaagggtgaatattctgtcatgtcattcttgaatctttcttgataaaatcatttttgatatctagcatt 52064376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 27523129 - 27523054
Alignment:
Q  17 taaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    ||||||| ||||||| ||| ||||||||   ||||||| |  ||||||||||||||| ||||||||||||| ||||    
T  27523129 taaaatcaaagggtgattaatctgccatacgattcttgaatctttcttgataaaatcattcttgatatataacatt 27523054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 25973601 - 25973673
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||| ||| |||| ||||| || ||||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  25973601 aaatttaaaggtgattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 25973673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 44094891 - 44094963
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| || |||||||||||||||  |||||| |||||||  |||||||||| |||||||    
T  44094891 aaatctaaaggtgattattgtgtcatgtcattcttggatctttctt-ataaaataattcttgatatctagcatt 44094963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 59 - 96
Target Start/End: Complemental strand, 52329356 - 52329319
Alignment:
Q  59 tttcttgataaaatctttcttgatatatagcattgctc 96  Q
    |||||||||||| |||||||||||||||| ||||||||    
T  52329356 tttcttgataaattctttcttgatatataacattgctc 52329319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 97
Target Start/End: Original strand, 9389275 - 9389303
Alignment:
Q  69 aaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||||||||    
T  9389275 aaatctttcttgatatatagcattgctct 9389303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 52329469 - 52329504
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttg 54  Q
    ||||||||||||| ||||||||| ||||||||||||    
T  52329469 aaatctaagggtgattattctgctatgtcattcttg 52329504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 78; Significance: 1e-36; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 41099 - 41010
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  41099 atttcttgataaaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcattgctct 41010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 41204 - 41276
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| | |||| |||||||||||  |||||| |||||||| |||||||||| |||||||    
T  41204 aaatctaaaggtgattattgtaccatatcattcttggatctttctt-ataaaatcattcttgatatctagcatt 41276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 1e-36; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 3574504 - 3574593
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  3574504 atttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctct 3574593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 6041972 - 6041884
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  6041972 atttcttgataaaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 6041884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 2754805 - 2754716
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  2754805 atttcttgataaaatctaaaggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctct 2754716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 3137391 - 3137480
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  3137391 atttcttgataaaatctaagggtgattattttgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctct 3137480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 33113881 - 33113792
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  33113881 atttcttgataaaatctaagggtgattattctgccatgtaattcttgaaattttcttaataaaatctttcttgatatatagcattgctct 33113792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 3456152 - 3456064
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  3456152 atttcttgataaaatctaagggtgattattctgccatatcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 3456064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 37217030 - 37217118
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  37217030 atttcttgataaaatttaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 37217118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 48160993 - 48160905
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  48160993 atttcttgataaaatctaagggtgattattctgccatatcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 48160905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 7e-32
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 11347356 - 11347267
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    ||||| |||||||||||||||||  |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  11347356 atttcctgataaaatctaagggttattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctct 11347267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 7e-32
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 34482887 - 34482976
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| ||||||| |||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  34482887 atttcttgataaaatctaagggtgattattctaccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctct 34482976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 3e-31
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 30385099 - 30385011
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    ||||||||||||||| |||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||    
T  30385099 atttcttgataaaatataagggtgattattctgccatgtcatttttgaaattttcttgataaaatctttcttgataaatagcattgctc 30385011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 33145803 - 33145713
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||  |||||| || |||||||||||||||||||||||||||||||    
T  33145803 acaatttcttgataaaatctaagggtgattattctgccatgtcattcttaaaatttt-ttaataaaatctttcttgatatatagcattgctc 33145713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 4e-30
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 9797003 - 9797093
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgct 95  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||| | ||||||||| |||||||||||||||||||| |||||||    
T  9797003 acaatttcttgataaaatctaatggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatataacattgct 9797093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 4e-30
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 42297442 - 42297352
Alignment:
Q  8 atttcttgataaaatctaagggtggttattct-gccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| ||||||| | ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  42297442 atttcttgataaaatctaagggtgattattctagtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctct 42297352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 22426321 - 22426410
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||  |||||||||||||||||||||||| ||||||| |||||||||    
T  22426321 atttcttgataaaatctaagggtgattattctgccatgtcatttttaaaattttcttgataaaatctttcttaatatataacattgctct 22426410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 19650878 - 19650965
Alignment:
Q  9 tttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    |||||||||||||||||| |||| |||||||||||||||||||||  |||||||||||||||||||||||| ||||||| ||||||||    
T  19650878 tttcttgataaaatctaatggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttaatatataacattgctc 19650965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 8320561 - 8320649
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    ||||||||||||||| |||||||| ||||| |||||| ||||||||  |||||||||||||||||||||||||||||||| ||||||||    
T  8320561 atttcttgataaaatttaagggtgattattttgccatatcattcttaaaattttcttgataaaatctttcttgatatataacattgctc 8320649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 8362019 - 8362110
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||| |   | |||||||||||||||||||||||    
T  8362019 acaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaatttttcttgaaattttttttcttgatatatagcattgctc 8362110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 24343639 - 24343546
Alignment:
Q  4 aacaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| ||| |||||||||||| | | | ||| | |||||||||||||||||||||| |||||||||||||||||    
T  24343639 aacaatttcttgataaaatctaagagtgattattctgccatattaattttgaatttttcttgataaaatctttcttaatatatagcattgctct 24343546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 37522141 - 37522052
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    ||||||| ||||||||| |||||| |||||||| ||||||||||||  ||||||||||| ||||||||||||||||||||| ||||||||    
T  37522141 atttctttataaaatcttagggtgattattctgtcatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagtattgctct 37522052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 6e-23
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 36865004 - 36865094
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctctg 98  Q
    |||| ||||||||| ||||||||| ||||||| |||||||||||||  ||||||||| |||||||||| ||| ||||||||||||||||||    
T  36865004 attttttgataaaacctaagggtgattattctaccatgtcattcttaaaattttcttaataaaatcttccttaatatatagcattgctctg 36865094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 33839623 - 33839530
Alignment:
Q  4 aacaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    ||||||||||||||||||||||| |||| |||||||| ||||| ||||||  | |||| ||||||||||||||||| ||||||| |||||||||    
T  33839623 aacaatttcttgataaaatctaatggtgattattctgtcatgttattcttaaattttttttgataaaatctttcttaatatataacattgctct 33839530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 9e-19
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 41224324 - 41224233
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    |||||||||| |||||||  ||||||| | ||||| |||||||||||||| | ||||||||| |||||||||||| |||||||||| |||||    
T  41224324 acaatttcttaataaaattcaagggtgataattctaccatgtcattcttgaatttttcttgagaaaatctttcttaatatatagcagtgctc 41224233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 9e-19
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 41883197 - 41883260
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgata 68  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||| | |||||||||||    
T  41883197 acaatttcttgataaaatttaagggtgattattctgccatgtcattcttgaatttttcttgata 41883260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 42921234 - 42921154
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatata 85  Q
    |||||||||||||||||||||| ||   | |||| | ||||||||||||  ||||||||||||||||||||||||||||||    
T  42921234 acaatttcttgataaaatctaaaggcaatcattcggtcatgtcattcttaaaattttcttgataaaatctttcttgatata 42921154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 47738196 - 47738117
Alignment:
Q  5 acaatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatat 84  Q
    ||||||| || ||||||||||| |||  |||||||||||| ||||||||| |  ||||||||||||||||||||||||||    
T  47738196 acaatttttttataaaatctaaaggtaattattctgccatatcattcttgaatatttcttgataaaatctttcttgatat 47738117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 3089505 - 3089460
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattctt 53  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  3089505 atttcttgataaaatctaagggtgattattctgccatgtcattctt 3089460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 26612865 - 26612784
Alignment:
Q  16 ataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||   ||||||||||||||||||||||||| | |||| || ||||||||||| ||||||||||  ||||||||    
T  26612865 ataaaatctaaaaatggttattctgccatgtcattcttgaatttttttttataaaatcttttttgatatataatattgctct 26612784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 40328025 - 40328098
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    ||||||||||||| ||||| || ||||||||||||| |  ||||||||||||||| |||||||||| |||||||    
T  40328025 aaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcatt 40328098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 3137285 - 3137213
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  3137285 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 3137213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 6042071 - 6042143
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  6042071 aaatctaaaggtgattattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatatctagcatt 6042143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 34482759 - 34482687
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  34482759 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 34482687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 36864904 - 36864831
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    ||||||||||||| ||||| || ||||||||||||| |  ||| ||||||||||| |||||||||| |||||||    
T  36864904 aaatctaagggtgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcttgatatctagcatt 36864831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 47738305 - 47738370
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatat 84  Q
    |||||||||| || ||||| |||||||||||||||| |  ||||||||||||||| ||||||||||    
T  47738305 aaatctaaggatgattattgtgccatgtcattcttgaatctttcttgataaaatcattcttgatat 47738370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 33839729 - 33839797
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatata 87  Q
    |||| |||||||| ||||| || ||||||||||||| |  ||||||||||||||| |||||||||||||    
T  33839729 aaatttaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatata 33839797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 59 - 93
Target Start/End: Complemental strand, 40327912 - 40327878
Alignment:
Q  59 tttcttgataaaatctttcttgatatatagcattg 93  Q
    |||||||||||||||||||||||||||||||||||    
T  40327912 tttcttgataaaatctttcttgatatatagcattg 40327878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 3089613 - 3089685
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  3089613 aaatctaaaggtgattattgtgccatgtcattcttagatctttctt-ataaaatcattcttgatatctagcatt 3089685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 8361910 - 8361838
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    ||||||||||||| ||||| || ||||||||||||| |  ||||||||| ||||| |||||||||| |||||||    
T  8361910 aaatctaagggtgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 8361838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 19650771 - 19650699
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  19650771 aaatctaaaggtgattattgtgtcatgtcattcttggatctttctt-ataaaatcattcttgatatctagcatt 19650699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 30385594 - 30385666
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||||||| |  |||||| |||||||| |||||||||| |||||||    
T  30385594 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatttagcatt 30385666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 33113988 - 33114060
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||||||| |  |||||| |||||||| |||||||||| |||||||    
T  33113988 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 33114060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 33145906 - 33145978
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    ||||||||||||| ||||| || ||||||||||||| |  |||||| |||||||| |||||||||| |||||||    
T  33145906 aaatctaagggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 33145978  T

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Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 37522247 - 37522319
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||||||  | ||||||| |||||||| |||||||||| |||||||    
T  37522247 aaatctaaaggtgattattatgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 37522319  T

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Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 41224428 - 41224500
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||| |||||||| ||||| |||||||||||||||| |  ||||||||| ||||| |||||||||| |||||||    
T  41224428 aaatttaagggtgattattgtgccatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatt 41224500  T

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Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 25108637 - 25108593
Alignment:
Q  99 ttatttaatatcattctatttaactacttcattaactacaattag 143  Q
    ||||| ||| ||||||||||||||||||||||||||||| |||||    
T  25108637 ttattgaatttcattctatttaactacttcattaactacgattag 25108593  T

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Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 97
Target Start/End: Original strand, 47402630 - 47402662
Alignment:
Q  65 gataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||||||||||||    
T  47402630 gataaaatctttcttgatatatagcattgctct 47402662  T

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Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 3574397 - 3574325
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||  |||| ||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  3574397 aaatctagaggtgattattgtgtcatgtcattcttggatctttctt-ataaaatcattcttgatatctagcatt 3574325  T

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Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 8320453 - 8320381
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||||||| |  |||||| |||||||| || ||||||| |||||||    
T  8320453 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattattgatatctagcatt 8320381  T

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Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 9796900 - 9796828
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    ||||||||| ||| ||||| || ||||||||||||| |  ||||||||| ||||| |||||||||| |||||||    
T  9796900 aaatctaagagtgattattgtgacatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcatt 9796828  T

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Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 22426216 - 22426144
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    ||||||||  ||| ||||| |||||||||||||||| |  |||||| |||||||| |||||||||| |||||||    
T  22426216 aaatctaaatgtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 22426144  T

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Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 26612940 - 26613005
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatat 84  Q
    ||||||||||||| ||||| |||||||| ||||||| |  |||||| |||||||| || |||||||    
T  26612940 aaatctaagggtgattattgtgccatgttattcttgaatctttcttaataaaatcattattgatat 26613005  T

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Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 37216924 - 37216852
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| | |||||||||||||| |  |||||| |||||||| |||||||||| |||||||    
T  37216924 aaatctaaaggtgattattgtaccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 37216852  T

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Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 42921319 - 42921392
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||| |||||||| || || |||||||||||||||  |  ||||||||||||||| ||||| |||| |||||||    
T  42921319 aaatttaagggtgattgttgtgccatgtcattcttaaatatttcttgataaaatcattcttaatatctagcatt 42921392  T

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Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 46919088 - 46919153
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatat 84  Q
    |||||||  |||| |||||||||||||||||| ||| |  ||| ||||||||||| ||||||||||    
T  46919088 aaatctagaggtgattattctgccatgtcattattgaatcttttttgataaaatcattcttgatat 46919153  T

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Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 42297952 - 42297920
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctg 40  Q
    |||||||||||||||||||||||| ||||||||    
T  42297952 atttcttgataaaatctaagggtgattattctg 42297920  T

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Target: chr3; HSP #56
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 42298056 - 42298091
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttg 54  Q
    ||||||||||||||||||| || |||||||||||||    
T  42298056 aaatctaagggtggttattgtgtcatgtcattcttg 42298091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 77; Significance: 4e-36; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 11709 - 11621
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  11709 atttcttgataaaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 11621  T

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Target: scaffold0178; HSP #2
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 11815 - 11879
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatat 84  Q
    |||||||| |||| ||||| |||||||||||||||  | ||||||| |||||||| ||||||||||    
T  11815 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 11879  T

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Target: scaffold0085 (Bit Score: 77; Significance: 4e-36; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 47938 - 47850
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 96  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  47938 atttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgataaatagcattgctc 47850  T

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Target: scaffold0471 (Bit Score: 75; Significance: 7e-35; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 75; E-Value: 7e-35
Query Start/End: Original strand, 8 - 106
Target Start/End: Complemental strand, 12930 - 12833
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctctgttatttaa 106  Q
    ||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  12930 atttcttgataaaatctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctct-ttatttaa 12833  T

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Target: scaffold0204 (Bit Score: 74; Significance: 3e-34; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 4484 - 4395
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctct 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||    
T  4484 atttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctct 4395  T

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Target: scaffold0665 (Bit Score: 72; Significance: 4e-33; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 3156 - 3069
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgct 95  Q
    |||||||||||||||||||||||| |||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||    
T  3156 atttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcattgct 3069  T

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Target: scaffold0228 (Bit Score: 70; Significance: 7e-32; HSPs: 5)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 70; E-Value: 7e-32
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 8490 - 8413
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatata 85  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8490 atttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 8413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 70; E-Value: 7e-32
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 16072 - 15995
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatata 85  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16072 atttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 15995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 70; E-Value: 7e-32
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 26024 - 25947
Alignment:
Q  8 atttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatata 85  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26024 atttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 25947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 26130 - 26202
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| |||| ||||| |||||||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  26130 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 26202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 16178 - 16250
Alignment:
Q  19 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 92  Q
    |||||||| | || ||||| |||||||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  16178 aaatctaaagatgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 16250  T

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Target: scaffold0041 (Bit Score: 36; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 85515 - 85452
Alignment:
Q  7 aatttcttgataaaatctaagggtggttattctgccatgtcattcttggaattttcttgataaa 70  Q
    |||||||| ||||||| ||||| || ||||||||||||||||||||||   |||||||||||||    
T  85515 aatttcttcataaaatttaaggatgattattctgccatgtcattcttgagtttttcttgataaa 85452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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