View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: F9359-LTR4-TNT-insertion-10 (Length: 765)

Name: F9359-LTR4-TNT-insertion-10
Description: F9359-LTR4
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] F9359-LTR4-TNT-insertion-10
F9359-LTR4-TNT-insertion-10
[»] chr6 (103 HSPs)
chr6 (9-758)||(26861588-26862337)
chr6 (339-704)||(26884189-26884562)
chr6 (307-754)||(27677369-27677825)
chr6 (395-751)||(27718228-27718587)
chr6 (367-754)||(27706220-27706613)
chr6 (404-754)||(31284264-31284617)
chr6 (307-730)||(27678946-27679378)
chr6 (346-751)||(26802421-26802835)
chr6 (307-730)||(27592775-27593207)
chr6 (395-751)||(27610851-27611210)
chr6 (389-751)||(28781118-28781483)
chr6 (395-751)||(27698343-27698702)
chr6 (389-751)||(28786257-28786622)
chr6 (389-751)||(28792378-28792743)
chr6 (395-758)||(27604554-27604920)
chr6 (334-751)||(27530982-27531405)
chr6 (476-751)||(27724775-27725053)
chr6 (548-742)||(26823828-26824025)
chr6 (545-754)||(26622952-26623164)
chr6 (545-754)||(26728930-26729142)
chr6 (10-198)||(26647044-26647235)
chr6 (10-198)||(26753012-26753203)
chr6 (340-758)||(26646451-26646875)
chr6 (340-758)||(26752419-26752843)
chr6 (416-688)||(27427476-27427751)
chr6 (9-204)||(26884629-26884827)
chr6 (9-240)||(25580245-25580479)
chr6 (317-726)||(27337833-27338248)
chr6 (317-726)||(27398573-27398988)
chr6 (9-193)||(26656535-26656722)
chr6 (9-193)||(26762506-26762693)
chr6 (9-122)||(27337520-27337633)
chr6 (9-122)||(27398260-27398373)
chr6 (9-240)||(26143391-26143625)
chr6 (372-724)||(26655995-26656350)
chr6 (372-724)||(26761966-26762321)
chr6 (9-121)||(25483704-25483816)
chr6 (340-748)||(25538522-25538939)
chr6 (341-751)||(25579698-25580117)
chr6 (9-204)||(25539102-25539300)
chr6 (512-730)||(25481742-25481963)
chr6 (64-240)||(25511461-25511640)
chr6 (596-748)||(26142847-26142999)
chr6 (379-691)||(28242843-28243158)
chr6 (19-116)||(31285209-31285306)
chr6 (9-240)||(26056445-26056679)
chr6 (9-240)||(26076415-26076649)
chr6 (494-689)||(26848701-26848899)
chr6 (9-116)||(25492744-25492851)
chr6 (596-730)||(26055926-26056060)
chr6 (596-730)||(26075896-26076030)
chr6 (10-116)||(26824469-26824575)
chr6 (444-754)||(28234540-28234852)
chr6 (9-116)||(27530726-27530833)
chr6 (10-204)||(27717925-27718122)
chr6 (382-691)||(28185405-28185720)
chr6 (9-116)||(28786888-28786995)
chr6 (9-116)||(28793009-28793116)
chr6 (395-521)||(27214632-27214758)
chr6 (395-521)||(27234470-27234596)
chr6 (596-691)||(26048884-26048979)
chr6 (596-691)||(26070053-26070148)
chr6 (596-691)||(28139580-28139675)
chr6 (596-689)||(28297766-28297859)
chr6 (596-689)||(28514214-28514307)
chr6 (596-691)||(28181153-28181248)
chr6 (10-116)||(27610546-27610652)
chr6 (602-691)||(2184327-2184416)
chr6 (479-691)||(28098302-28098517)
chr6 (9-204)||(27215011-27215209)
chr6 (623-751)||(27229211-27229339)
chr6 (559-754)||(28149914-28150111)
chr6 (602-758)||(28226922-28227078)
chr6 (379-691)||(28325520-28325831)
chr6 (9-116)||(28781751-28781858)
chr6 (10-116)||(27604130-27604236)
chr6 (9-110)||(27427037-27427138)
chr6 (148-204)||(27530868-27530924)
chr6 (10-110)||(27679606-27679706)
chr6 (9-199)||(26623835-26624028)
chr6 (9-199)||(26729812-26730005)
chr6 (612-726)||(25506978-25507092)
chr6 (387-648)||(26975134-26975398)
chr6 (602-691)||(2184937-2185026)
chr6 (387-631)||(26635789-26636036)
chr6 (387-631)||(26741755-26742002)
chr6 (146-203)||(27427177-27427234)
chr6 (9-110)||(27592446-27592547)
chr6 (382-471)||(28297549-28297638)
chr6 (382-471)||(28514435-28514524)
chr6 (531-649)||(26811590-26811711)
chr6 (157-204)||(27604280-27604327)
chr6 (596-650)||(26937174-26937228)
chr6 (387-521)||(26959378-26959512)
chr6 (9-110)||(26803102-26803203)
chr6 (389-470)||(26937369-26937450)
chr6 (557-649)||(27214498-27214593)
chr6 (557-649)||(27234635-27234730)
chr6 (444-521)||(27665015-27665092)
chr6 (9-110)||(27677045-27677146)
chr6 (9-110)||(27705829-27705930)
chr6 (155-192)||(28297314-28297351)
chr6 (155-192)||(28514722-28514759)
[»] scaffold0349 (3 HSPs)
scaffold0349 (395-751)||(14205-14563)
scaffold0349 (395-751)||(3269-3630)
scaffold0349 (10-204)||(2965-3162)
[»] scaffold0277 (4 HSPs)
scaffold0277 (389-751)||(4514-4879)
scaffold0277 (389-751)||(13475-13840)
scaffold0277 (9-116)||(13100-13207)
scaffold0277 (9-116)||(4137-4244)
[»] chr1 (6 HSPs)
chr1 (389-754)||(268187-268555)
chr1 (387-691)||(28127507-28127814)
chr1 (388-758)||(28164192-28164564)
chr1 (9-222)||(28127100-28127316)
chr1 (9-113)||(28163800-28163904)
chr1 (9-116)||(267765-267872)
[»] chr8 (2 HSPs)
chr8 (512-754)||(29273736-29273981)
chr8 (19-116)||(29273273-29273370)
[»] chr4 (19 HSPs)
chr4 (389-754)||(18731334-18731702)
chr4 (389-754)||(18679397-18679765)
chr4 (389-754)||(18699230-18699598)
chr4 (389-754)||(18723915-18724283)
chr4 (389-754)||(18655307-18655675)
chr4 (416-688)||(18073804-18074079)
chr4 (494-648)||(5090902-5091059)
chr4 (9-116)||(18698821-18698928)
chr4 (9-110)||(18074417-18074518)
chr4 (9-110)||(18654898-18654999)
chr4 (9-116)||(18678981-18679088)
chr4 (146-203)||(18074321-18074378)
chr4 (155-204)||(18655047-18655096)
chr4 (9-110)||(18723506-18723607)
chr4 (155-204)||(18723655-18723704)
chr4 (9-110)||(18730925-18731026)
chr4 (596-688)||(17989093-17989185)
chr4 (155-204)||(18679130-18679179)
chr4 (155-204)||(18731074-18731123)
[»] scaffold0419 (2 HSPs)
scaffold0419 (389-751)||(7504-7869)
scaffold0419 (9-116)||(8137-8244)
[»] scaffold0003 (3 HSPs)
scaffold0003 (416-688)||(59612-59887)
scaffold0003 (9-110)||(60225-60326)
scaffold0003 (146-203)||(60129-60186)
[»] scaffold0038 (4 HSPs)
scaffold0038 (379-691)||(43005-43320)
scaffold0038 (444-754)||(34701-35014)
scaffold0038 (417-758)||(27420-27764)
scaffold0038 (379-691)||(116835-117146)
[»] scaffold0019 (1 HSPs)
scaffold0019 (596-691)||(58335-58430)
[»] scaffold1254 (1 HSPs)
scaffold1254 (636-751)||(10-125)
[»] chr2 (3 HSPs)
chr2 (602-752)||(3279666-3279816)
chr2 (387-469)||(3279967-3280049)
chr2 (402-571)||(17993540-17993709)


Alignment Details
Target: chr6 (Bit Score: 726; Significance: 0; HSPs: 103)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 726; E-Value: 0
Query Start/End: Original strand, 9 - 758
Target Start/End: Complemental strand, 26862337 - 26861588
Alignment:
Q  9 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26862337 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 26862238  T
Q  109 tatttggctacgtgcaaaacacgttcggtcttgtccaagatgtctctgactatcttcccaataaactcatattcatatctattcacgtccaataagttta 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26862237 tatttggctacgtgcaaaacacgttcggtcttgtccaagatgtctctgactatcttcccaataaactcatattcatatctattcacgtccaataagttta 26862138  T
Q  209 attagtacacacactacaatcacgatcacatcattatttaattacaacnnnnnnnnttaatacttgtttgggaatataaataaaaatgtggttttctatt 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||    
T  26862137 attagtacacacactacaatcacgatcacatcattatttaattacaacaaaaaaaattaatacttgtttgggaatataaataaaaatgtggttttctatt 26862038  T
Q  309 taactttaaagatgagattactctagaatagaaattaaagaaagaaaatataaaaaggaataggatttatgttaagtggggtacccaggactaaaatggt 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26862037 taactttaaagatgagattactctagaatagaaattaaagaaagaaaatataaaaaggaataggatttatgttaagtggggtacccaggactaaaatggt 26861938  T
Q  409 agcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaaccttttttcatgcttagccaa 508  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26861937 agcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaaccttttttcatgcttagccaa 26861838  T
Q  509 tgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgacccttttccttgcagttaatgatt 608  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26861837 tgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgacccttttccttgcagttaatgatt 26861738  T
Q  609 tggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggcattgtcgagtgatcttt 708  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26861737 tggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggcattgtcgagtgatcttt 26861638  T
Q  709 tgatttcatcccctctttgaagttcacgatcatccatgaaggtgtgaatt 758  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26861637 tgatttcatcccctctttgaagttcacgatcatccatgaaggtgtgaatt 26861588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 167; E-Value: 5e-89
Query Start/End: Original strand, 339 - 704
Target Start/End: Complemental strand, 26884562 - 26884189
Alignment:
Q  339 gaaattaaagaaagaaaatataaaaagg---aataggatttatgttaagtggggtacccaggactaaaatggtagcctgacaagttagcagcttggttca 435  Q
    |||||||||||||||||||||||||| |   |||| |||||| || ||||||| |||||| |||||||||||||||| |||||||||||| ||||  |||    
T  26884562 gaaattaaagaaagaaaatataaaaaaggaaaatatgatttaagtaaagtgggatacccaagactaaaatggtagccggacaagttagcaacttgcctca 26884463  T
Q  436 gagcaactttccatctctgcaacctctccatgttatccatatcattttgaaaccttttttcatgcttagccaatgcttcaccataaatacctctatgatg 535  Q
     ||| | |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||| ||||| |||||||    
T  26884462 tagccattttccatcgctgcaacctctccatgttatccttatcattttgaaaccttttttcatggtcagccaatgcttcaccataactacctgtatgatg 26884363  T
Q  536 tcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgacccttt---tccttgcagttaatg--atttggacaagttcatccaaacaaa 630  Q
    |||||||| |||||||||||  |||   |||||||||||||||| ||||||||||   || | ||||| ||||  || ||||||||||| ||||||||||    
T  26884362 tcgcacatcagtaggatccacaccaacaaaaacaggcaaaacgaggcgaccctttgtctcgtagcagtgaatgacatgtggacaagttcgtccaaacaaa 26884263  T
Q  631 atgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggcattgtcgagtgat 704  Q
    |||| ||||| |||||||||| |||||| |  ||||| ||||||||||| ||||||||||| |||  |||||||    
T  26884262 atgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgat 26884189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 307 - 754
Target Start/End: Original strand, 27677369 - 27677825
Alignment:
Q  307 tttaactttaaagatgagattactctagaatagaaattaaagaaagaaaatataaaaaggaa---taggatttatgttaagtggggtacccagga---ct 400  Q
    |||||| || |||||||||||| | |  ||| ||| || |||||| |||||| |||| ||||   ||||||||| || |||| ||||||||||||   ||    
T  27677369 tttaacctttaagatgagattattgtgaaattgaagttgaagaaataaaatagaaaagggaaaaataggatttaagtaaagttgggtacccaggaggact 27677468  T
Q  401 aaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaaccttttttcatgc 500  Q
    |  ||||||||| |||||||||||||| ||| |||||||  ||||||||| |||||||||||||||| | | |  ||||||||||||||| |||||||||    
T  27677469 atcatggtagccggacaagttagcagcctggctcagagcctctttccatccctgcaacctctccatgcttttcggatcattttgaaacctcttttcatgc 27677568  T
Q  501 ttagccaatgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgacccttttccttg---c 597  Q
    | ||||||||||||||||||| ||||| | |||||||||||| ||||||| ||||   || |||||||||||| ||||| ||||||||||  ||||   |    
T  27677569 tcagccaatgcttcaccataactacctttctgatgtcgcacaatagtaggttccacagcaaagaaaacaggcagaacgaggcgaccctttgtcttgtagc 27677668  T
Q  598 agttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggcattgtc 697  Q
    ||| |||||| ||||||||||| |||||||||||||| |||||||||||||||  ||||||||||| ||| ||||| ||||||||||||||||| |||      
T  27677669 agtgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacagcaataaaaatcctagactcttcaatggccttgag 27677768  T
Q  698 gagtgatcttttgatttcatcccctctttgaagttcacgatcatccatgaaggtgtg 754  Q
     ||||||  | |||||||||||||||||||||||||| |||  || |||||||||||    
T  27677769 aagtgatggtgtgatttcatcccctctttgaagttcatgattgtcaatgaaggtgtg 27677825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 395 - 751
Target Start/End: Original strand, 27718228 - 27718587
Alignment:
Q  395 aggactaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaaccttttt 494  Q
    |||||||  ||||||||| |||||||||||||| ||| ||||||| |||||||||| |||||||||||||||||||| | |||||||||||||||| |||    
T  27718228 aggactatcatggtagccggacaagttagcagcctggctcagagccactttccatcgctgcaacctctccatgttattcttatcattttgaaacctcttt 27718327  T
Q  495 tcatgcttagccaatgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgacccttttcct 594  Q
    ||||||| ||||||||||||||||||| ||||| | ||||||||||| |||||||| |||| |||  |||||||||||||||||| ||||||||||  ||    
T  27718328 tcatgctcagccaatgcttcaccataactacctttctgatgtcgcacgttagtaggttccacgccgaagaaaacaggcaaaacgaggcgaccctttgtct 27718427  T
Q  595 t---gcagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggc 691  Q
    |   ||||| ||| || ||||||||||| ||||||||||| || |||||||||||||||  ||||||||||||||| ||||| ||||| || ||||||||    
T  27718428 tgtagcagtgaattatgtggacaagttcgtccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagattcatcaatggc 27718527  T
Q  692 attgtcgagtgatcttttgatttcatcccctctttgaagttcacgatcatccatgaaggt 751  Q
     |||  |||||||  | |||||||||| ||||||||||| |||   ||||| ||||||||    
T  27718528 cttgaggagtgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggt 27718587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 367 - 754
Target Start/End: Original strand, 27706220 - 27706613
Alignment:
Q  367 aataggatttatgttaagtggggtacccagga---ctaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctc 463  Q
    ||||||||||| || |||| ||||||||||||   |||  ||||||||| |||||||||||||| ||| |||||||  ||||||||| ||||||||||||    
T  27706220 aataggatttaagtaaagttgggtacccaggaggactatcatggtagccggacaagttagcagcctggctcagagcctctttccatccctgcaacctctc 27706319  T
Q  464 catgttatccatatcattttgaaaccttttttcatgcttagccaatgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatag 563  Q
    |||||| | |  ||||||||||||||| |||||||||| ||||||||||||||||||| ||||| || ||||||||||| ||||||| || |  ||| |     
T  27706320 catgtttttcggatcattttgaaacctcttttcatgctcagccaatgcttcaccataactacctttacgatgtcgcacaatagtaggttctacaccaaat 27706419  T
Q  564 aaaacaggcaaaacgacgcgacccttttcctt---gcagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaaca 660  Q
    |||||||||| ||||| ||||||||||  |||   ||||| |||||| ||||||||||| |||||||||||||| |||||||||||| ||  ||||||||    
T  27706420 aaaacaggcagaacgaggcgaccctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcataggtgatagaaaaca 27706519  T
Q  661 caggaatgaaaattctagactcttcaatggcattgtcgagtgatcttttgatttcatcccctctttgaagttcacgatcatccatgaaggtgtg 754  Q
    ||||||| ||||| ||||||||||||||||| |||   ||||||  | |||||||||||| ||||||||||||| |||  || |||||||||||    
T  27706520 caggaataaaaatcctagactcttcaatggccttgagaagtgatggtgtgatttcatcccttctttgaagttcatgattgtcaatgaaggtgtg 27706613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 404 - 754
Target Start/End: Complemental strand, 31284617 - 31284264
Alignment:
Q  404 atggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaaccttttttcatgctta 503  Q
    ||||| ||| ||||||||||| |||||  | ||||| |  |||||| | |||||||| ||||| | |||  ||| || ||| ||||| | ||||||||||    
T  31284617 atggtcgccagacaagttagctgcttgagtaagagctatcttccatttttgcaacctttccatatgatctgtattatgttggaacctctcttcatgctta 31284518  T
Q  504 gccaatgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgacccttttccttgca---gt 600  Q
    ||||||||||| |||||| ||||||||||||||||||||| || |||||||| |||| ||||||| |||||||||| |||||| |||| |||  |   ||    
T  31284517 gccaatgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagt 31284418  T
Q  601 taatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggcattgtcgag 700  Q
     |||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||| || || ||||| ||||||||||||||||||||||||||    
T  31284417 gaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgag 31284318  T
Q  701 tgatcttttgatttcatcccctctttgaagttcacgatcatccatgaaggtgtg 754  Q
    ||||  | ||||||||||||||||||||||||||| |||||| |||||||||||    
T  31284317 tgatggtgtgatttcatcccctctttgaagttcactatcatcaatgaaggtgtg 31284264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 307 - 730
Target Start/End: Complemental strand, 27679378 - 27678946
Alignment:
Q  307 tttaactttaaagatgagattactctagaatagaaattaaagaaagaaaatataaaaaggaa---taggatttatgttaagtggggtacccagga---ct 400  Q
    |||||| || |||||||||||| | || ||| ||| || |||||| |||||| |||| ||||   ||||||||| || |||| ||||||||||||   ||    
T  27679378 tttaacctttaagatgagattattgtaaaattgaagttgaagaaataaaatagaaaagggaaaaataggatttaagtaaagttgggtacccaggaggact 27679279  T
Q  401 aaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaaccttttttcatgc 500  Q
    |  ||||||||| |||||||||||||| ||| |||||||   ||||||||  ||||||||||||||||| | |  ||||||||||||||| |||||||||    
T  27679278 atcatggtagccggacaagttagcagcctggctcagagcctttttccatccttgcaacctctccatgtttttcggatcattttgaaacctcttttcatgc 27679179  T
Q  501 ttagccaatgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgacccttttcctt---gc 597  Q
    | ||||||||||||||||||| ||||| || |||||||||||  |||||| ||||  ||| |||||||||||| ||||| ||||||||||  |||   ||    
T  27679178 tcagccaatgcttcaccataactacctttacgatgtcgcacaacagtaggttccacaccaaagaaaacaggcagaacgaggcgaccctttgtcttgtagc 27679079  T
Q  598 agttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggcattgtc 697  Q
    ||| |||||| ||||||||||| |||||||||||||| |||||||||||||||  ||||||||||||||| ||||| ||||||||||||||||| |||      
T  27679078 agtgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggccttgag 27678979  T
Q  698 gagtgatcttttgatttcatcccctctttgaag 730  Q
     ||||||  | |||||||||| |||||||||||    
T  27678978 aagtgatggtgtgatttcatctcctctttgaag 27678946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 346 - 751
Target Start/End: Complemental strand, 26802835 - 26802421
Alignment:
Q  346 aagaaagaaaatataaaaaggaa---taggatttatgttaagtggggtacccagga---ctaaaatggtagcctgacaagttagcagcttggttcagagc 439  Q
    |||||| ||||||||||| ||||   ||||||||| || |||| ||||||| ||||   |||  ||||||||| |||||||||||||| ||| |||||||    
T  26802835 aagaaataaaatataaaagggaaaaataggatttaagtaaagttgggtaccgaggaggactatcatggtagccggacaagttagcagcctggctcagagc 26802736  T
Q  440 aactttccatctctgcaacctctccatgttatccatatcattttgaaaccttttttcatgcttagccaatgcttcaccataaatacctctatgatgtcgc 539  Q
     |||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||  ||| | ||||||| |||    
T  26802735 cactttccatcgctccaacctctccatgttatccttatcattttgaaaccttttttcatgctcagccaatgcttcaccatagctacatgtatgatggcgc 26802636  T
Q  540 acattagtaggatccatgccatagaaaacaggcaaaacgacgcgacccttttcctt---gcagttaatgatttggacaagttcatccaaacaaaatgacg 636  Q
    ||||||||||||||||  ||| |||||| |||||| |||| ||||||||||  |||   ||| | ||| || || |||||||| ||||| ||||||   |    
T  26802635 acattagtaggatccacaccaaagaaaataggcaagacgaggcgaccctttgtcttatagcaatgaataatgtgaacaagttcgtccaagcaaaattttg 26802536  T
Q  637 aagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggcattgtcgagtgatcttttgatttcatcccctctttgaagttcacg 736  Q
    ||||||||||||||  ||||||||||||||| ||||||||||| ||||||||||| |||  |||||||  | |||||||||| ||||||||||| |||      
T  26802535 aagaggcatagttgatagaaaacacaggaataaaaattctagattcttcaatggccttgatgagtgatggtgtgatttcatctcctctttgaagatcatt 26802436  T
Q  737 atcatccatgaaggt 751  Q
     ||||| ||||||||    
T  26802435 gtcatcaatgaaggt 26802421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 307 - 730
Target Start/End: Original strand, 27592775 - 27593207
Alignment:
Q  307 tttaactttaaagatgagattactctagaatagaaattaaagaaagaaaatataaaaaggaa---taggatttatgttaagtggggtacccagga---ct 400  Q
    |||||| || |||||||||||| | || ||| ||| || |||||| |||||| |||| ||||   ||||||||| || |||| ||||||||||||   ||    
T  27592775 tttaacctttaagatgagattattgtaaaattgaagttgaagaaataaaatagaaaagggaaaaataggatttaagtaaagttgggtacccaggaggact 27592874  T
Q  401 aaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaaccttttttcatgc 500  Q
    |  ||||||||| |||||||||||||| ||| |||||||  ||||||||| |||||||||||||||||| | |  ||||||||||||||| |||||||||    
T  27592875 atcatggtagccggacaagttagcagcctggctcagagcgtctttccatccctgcaacctctccatgtttttcggatcattttgaaacctcttttcatgc 27592974  T
Q  501 ttagccaatgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgacccttttcctt---gc 597  Q
    | ||||||||||||||||||| ||||| ||||||||||||||| || ||||||||  ||| ||||||||||||||||   ||||||||||  |||   ||    
T  27592975 tcagccaatgcttcaccataactacctttatgatgtcgcacatgagaaggatccacaccaaagaaaacaggcaaaacagggcgaccctttgtcttgtagc 27593074  T
Q  598 agttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggcattgtc 697  Q
    | | |||||| ||| ||||||| ||||||||||| || |||||||||||||||  ||||||||||||||| ||||| ||||||||||||||||| |||      
T  27593075 aatgaatgatgtggtcaagttcgtccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggccttgag 27593174  T
Q  698 gagtgatcttttgatttcatcccctctttgaag 730  Q
     ||||||  | |||||||||  |||||||||||    
T  27593175 aagtgatggtgtgatttcatttcctctttgaag 27593207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 150; E-Value: 7e-79
Query Start/End: Original strand, 395 - 751
Target Start/End: Original strand, 27610851 - 27611210
Alignment:
Q  395 aggactaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaaccttttt 494  Q
    |||||||  ||||||||| || ||||| ||||| ||| ||||||| |||||||||| |||||||||||||||||||| | |||||||||||||||| |||    
T  27610851 aggactatcatggtagccggaaaagtttgcagcctggctcagagccactttccatccctgcaacctctccatgttattcttatcattttgaaacctcttt 27610950  T
Q  495 tcatgcttagccaatgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgacccttttcct 594  Q
    ||||||| ||||||||||||||||||| ||||| | ||||||||||| |||||||| |||| |||  |||||||||||||||||| ||||||||||  ||    
T  27610951 tcatgctcagccaatgcttcaccataactacctttctgatgtcgcactttagtaggttccacgccgaagaaaacaggcaaaacgaggcgaccctttgtct 27611050  T
Q  595 t---gcagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggc 691  Q
    |   ||||| ||| || ||||||||||| ||||||||||| || |||||||||||||||  ||||||||||||||| ||||| ||||| || ||||||||    
T  27611051 tgtagcagtgaattatgtggacaagttcgtccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagattcatcaatggc 27611150  T
Q  692 attgtcgagtgatcttttgatttcatcccctctttgaagttcacgatcatccatgaaggt 751  Q
     |||  |||||||  | |||||||||| |||||| |||| |||   ||||| ||||||||    
T  27611151 cttgaggagtgatggtgtgatttcatctcctcttggaagatcattgtcatcaatgaaggt 27611210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 389 - 751
Target Start/End: Complemental strand, 28781483 - 28781118
Alignment:
Q  389 gtacccaggactaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaac 488  Q
    ||||||||||||| |||||||||| |||||||||||||||||| ||||||| |  ||||||   ||||||||||||||||||||| ||||||||||||||    
T  28781483 gtacccaggactagaatggtagccggacaagttagcagcttgggtcagagccaacttccattgatgcaacctctccatgttatccttatcattttgaaac 28781384  T
Q  489 cttttttcatgcttagccaatgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgaccct 588  Q
    || ||||||||   |||||||||||||||||||  |||| |||||||||||||||||||||||||||  ||| |||||||||||||||||| |||||| |    
T  28781383 ctcttttcatgtccagccaatgcttcaccataaggacctgtatgatgtcgcacattagtaggatccacaccaaagaaaacaggcaaaacgaggcgacctt 28781284  T
Q  589 tttcctt---gcagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttc 685  Q
    ||  |||   ||| | ||| || || |||||||| ||||| ||||||   |||| ||||||||||  ||||||||||||||| ||||| ||||| |||||    
T  28781283 ttgtcttgtagcaatgaataatgtgaacaagttcgtccaagcaaaattttgaagtggcatagttgatagaaaacacaggaataaaaatcctagattcttc 28781184  T
Q  686 aatggcattgtcgagtgatcttttgatttcatcccctctttgaagttcacgatcatccatgaaggt 751  Q
     ||||| |||  |||||||  | |||||||||| ||||||||||| |||   ||||| ||||||||    
T  28781183 gatggccttgaggagtgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggt 28781118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 395 - 751
Target Start/End: Original strand, 27698343 - 27698702
Alignment:
Q  395 aggactaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaaccttttt 494  Q
    |||||||  ||||||||| |||||||||||||| ||| |||||||  ||||||||| |||||||||||||||||| | |  ||||||||||||||| |||    
T  27698343 aggactatcatggtagccggacaagttagcagcctggctcagagcctctttccatccctgcaacctctccatgtttttcggatcattttgaaacctcttt 27698442  T
Q  495 tcatgcttagccaatgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgacccttt---t 591  Q
    ||||||| |||||||||||  |||||| ||||| ||||||||| ||||||||| || ||||  ||  |||||||||||||||||| ||||||||||   |    
T  27698443 tcatgctcagccaatgctttgccataactacctttatgatgtctcacattagttggttccacaccgaagaaaacaggcaaaacgaggcgaccctttgtct 27698542  T
Q  592 ccttgcagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggc 691  Q
    | | ||||| ||| || ||||||||||| |||||||||||||| ||||| |||||||||  ||||||||||||||| ||||| ||||| || ||||||||    
T  27698543 cgtagcagtgaattatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttgagagaaaacacaggaataaaaatcctagattcatcaatggc 27698642  T
Q  692 attgtcgagtgatcttttgatttcatcccctctttgaagttcacgatcatccatgaaggt 751  Q
     |||  |||||||  | |||||||||| ||||||||||| |||   ||||| ||||||||    
T  27698643 cttgaggagtgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggt 27698702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 389 - 751
Target Start/End: Complemental strand, 28786622 - 28786257
Alignment:
Q  389 gtacccaggactaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaac 488  Q
    ||||||||||||| |||||||||| |||||||||||||||||| ||||||| |  ||||||   ||||||||||||||||||||| ||||||||||||||    
T  28786622 gtacccaggactagaatggtagccggacaagttagcagcttgggtcagagccaacttccattgatgcaacctctccatgttatccttatcattttgaaac 28786523  T
Q  489 cttttttcatgcttagccaatgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgaccct 588  Q
    || |||||||||  |||||||||||||||||||  |||| ||||||||||||||||||||||||| |  ||| |||||||||||||||||| |||||| |    
T  28786522 ctcttttcatgcccagccaatgcttcaccataacgacctgtatgatgtcgcacattagtaggatcgacaccaaagaaaacaggcaaaacgaggcgacctt 28786423  T
Q  589 tttcctt---gcagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttc 685  Q
    ||  |||   ||| | ||| || || |||||||| ||||| ||||||   || | ||| ||||||  ||||||||||||||| ||||| ||||| |||||    
T  28786422 ttgtcttgtagcaatgaataatgtgaacaagttcgtccaagcaaaattttgatgtggcgtagttgatagaaaacacaggaataaaaatcctagattcttc 28786323  T
Q  686 aatggcattgtcgagtgatcttttgatttcatcccctctttgaagttcacgatcatccatgaaggt 751  Q
     ||||| |||  |||||||  | |||||||||| ||||||||||| |||   ||||| ||||||||    
T  28786322 gatggccttgaggagtgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggt 28786257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 389 - 751
Target Start/End: Complemental strand, 28792743 - 28792378
Alignment:
Q  389 gtacccaggactaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaac 488  Q
    ||||||||||||| |||||||||| |||||||||||||||||| ||||||| |  ||||||   ||||||||||||||||||||| ||||||||||||||    
T  28792743 gtacccaggactagaatggtagccggacaagttagcagcttgggtcagagccaacttccattgatgcaacctctccatgttatccttatcattttgaaac 28792644  T
Q  489 cttttttcatgcttagccaatgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgaccct 588  Q
    || |||||||||  |||||||||||||||||||  |||| ||||||||||||||||||||||||| |  ||| |||||||||||||||||| |||||| |    
T  28792643 ctcttttcatgcccagccaatgcttcaccataacgacctgtatgatgtcgcacattagtaggatcgacaccaaagaaaacaggcaaaacgaggcgacctt 28792544  T
Q  589 tttcctt---gcagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttc 685  Q
    ||  |||   ||| | ||| || || |||||||| ||||| ||||||   || | ||| ||||||  ||||||||||||||| ||||| ||||| |||||    
T  28792543 ttgtcttgtagcaatgaataatgtgaacaagttcgtccaagcaaaattttgatgtggcgtagttgatagaaaacacaggaataaaaatcctagattcttc 28792444  T
Q  686 aatggcattgtcgagtgatcttttgatttcatcccctctttgaagttcacgatcatccatgaaggt 751  Q
     ||||| |||  |||||||  | |||||||||| ||||||||||| |||   ||||| ||||||||    
T  28792443 gatggccttgaggagtgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggt 28792378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 395 - 758
Target Start/End: Original strand, 27604554 - 27604920
Alignment:
Q  395 aggactaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaaccttttt 494  Q
    |||||||  ||||||||| || ||||||||||| ||| ||||||| |||||||||| |||||||||||  |||||||||  |||||||||||||||||||    
T  27604554 aggactatcatggtagccggaaaagttagcagcctggctcagagccactttccatcgctgcaacctctttatgttatcctcatcattttgaaaccttttt 27604653  T
Q  495 tcatgcttagccaatgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgacccttttcc- 593  Q
    | ||||| ||||||||||| ||| ||| ||||| ||||||||||||||| || ||| ||||  ||| |||||||||||||||||||||||||||||  |     
T  27604654 ttatgctcagccaatgcttgaccgtaactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaacgacgcgaccctttgtcg 27604753  T
Q  594 --ttgcagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggc 691  Q
      | ||| | |||||| || |||||||||||||||||||| || ||||||||||| |||  ||||||||||||||| ||||| || || || ||||||||    
T  27604754 tgtagcaatgaatgatgtgaacaagttcatccaaacaaaaggaagaagaggcatatttgatagaaaacacaggaataaaaatcctggattcatcaatggc 27604853  T
Q  692 attgtcgagtgatcttttgatttcatcccctctttgaagttcacgatcatccatgaaggtgtgaatt 758  Q
     |||   |||| |  | |||||||||| |||||| |||| |||   ||||| |||||||| ||||||    
T  27604854 cttgagaagtgctggtgtgatttcatctcctcttcgaagatcattttcatcaatgaaggtatgaatt 27604920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 334 - 751
Target Start/End: Original strand, 27530982 - 27531405
Alignment:
Q  334 gaatagaaattaaagaaagaaaatataaaaaggaa---taggatttatgttaagtggggtacccaggactaaaatggtagcctgacaagttagcagcttg 430  Q
    |||| ||||||||||||||||||||||||| ||||   ||||||||| || ||||||| |||||| |  || |||| | ||| ||||||||||| |||||    
T  27530982 gaattgaaattaaagaaagaaaatataaaagggaaaaataggatttaagtaaagtgggctacccatgtttataatgctggccagacaagttagccgcttg 27531081  T
Q  431 gttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaaccttttttcatgcttagccaatgcttcaccataaatacctcta 530  Q
    | |||||||  ||||||||  ||||||||||||  |||||||| |||||||||||||| |||||| ||||  ||| ||||||||||||||  ||||| |     
T  27531082 gctcagagcttctttccattgctgcaacctctcagtgttatccttatcattttgaaacttttttttatgcacagctaatgcttcaccatatctacctgtg 27531181  T
Q  531 tgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgacccttt---tccttgcagttaatgatttggacaagttcatccaaac 627  Q
    ||||||||||||| |||||||||||  |||   |||||||||||||| |  | |||||||   || | ||| | | |||| || |||||||| |||||||    
T  27531182 tgatgtcgcacatcagtaggatccacaccaataaaaacaggcaaaacaagacaaccctttgtatcgtagcaatgagtgatgtgaacaagttcgtccaaac 27531281  T
Q  628 aaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggcattgtcgagtgatcttttgatttcatcccctctttg 727  Q
    ||||||| ||||| ||||||||  ||||||| || ||||| ||||| ||||| | |||||||||||| |  ||||||  | |||||||||| ||||||||    
T  27531282 aaaatgaagaagatgcatagttttcagaaaatacgggaataaaaatcctagatttttcaatggcattttttagtgatggtgtgatttcatctcctctttg 27531381  T
Q  728 aagttcacgatcatccatgaaggt 751  Q
    ||| |||   ||||| ||||||||    
T  27531382 aagatcattgtcatcaatgaaggt 27531405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 476 - 751
Target Start/End: Original strand, 27724775 - 27725053
Alignment:
Q  476 atcattttgaaaccttttttcatgcttagccaatgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaa 575  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||| ||||| | ||||||||||| |||||||| |||| |||  ||||||||||||||    
T  27724775 atcattttgaaacctcttttcatgctcagccaatgcttcaccataactacctttctgatgtcgcacgttagtaggttccacgccgaagaaaacaggcaaa 27724874  T
Q  576 acgacgcgacccttttcctt---gcagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaa 672  Q
    |||| ||||||||||  |||   ||||| ||| || ||||||||||| ||||||||||| || ||| |||||||||||  ||||||||||||||| ||||    
T  27724875 acgaggcgaccctttgtcttgtagcagtgaattatgtggacaagttcgtccaaacaaaacgaagaataggcatagttgatagaaaacacaggaataaaaa 27724974  T
Q  673 ttctagactcttcaatggcattgtcgagtgatcttttgatttcatcccctctttgaagttcacgatcatccatgaaggt 751  Q
    | ||||| || |||||||| |||  |||||||  | |||||||||| ||||||||||| |||   ||||| ||||||||    
T  27724975 tcctagattcatcaatggccttgaggagtgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggt 27725053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 548 - 742
Target Start/End: Complemental strand, 26824025 - 26823828
Alignment:
Q  548 aggatccatgccatagaaaacaggcaaaacgacgcgacccttttccttgcagtt---aatgatttggacaagttcatccaaacaaaatgacgaagaggca 644  Q
    ||||||||  |||||||||||||||||||||| ||| |||||||||||| ||     |||||| ||||||||||| |||||||||||||| |||||||||    
T  26824025 aggatccacaccatagaaaacaggcaaaacgaggcgccccttttccttgtagacgcgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggca 26823926  T
Q  645 tagttggcagaaaacacaggaatgaaaattctagactcttcaatggcattgtcgagtgatcttttgatttcatcccctctttgaagttcacgatcatc 742  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||| | |||||||  || ||||| |||||||||||||||||||||||||||    
T  26823925 tagttggcagaaaacacaggaataaaaatcctagactcttcaatggcattattgagtgattgttcgattttatcccctctttgaagttcacgatcatc 26823828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 545 - 754
Target Start/End: Complemental strand, 26623164 - 26622952
Alignment:
Q  545 agtaggatccatgccatagaaaacaggcaaaacgacgcgacccttttccttg---cagttaatgatttggacaagttcatccaaacaaaatgacgaagag 641  Q
    ||||||||||| ||||||||| || ||||||||||  |||||||||   |||   |||| |||||| |||||||||||||||||||||||||| ||| |     
T  26623164 agtaggatccacgccatagaagacgggcaaaacgagacgaccctttgttttgtagcagtgaatgatgtggacaagttcatccaaacaaaatgaagaatat 26623065  T
Q  642 gcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggcattgtcgagtgatcttttgatttcatcccctctttgaagttcacgatcat 741  Q
    |||||||||| ||||||||||||||| ||||| ||||||||||| || |||||||| ||||||  ||||||||| |||||||||||||||||||||||||    
T  26623064 gcatagttgggagaaaacacaggaataaaaatcctagactcttcgatagcattgtcaagtgatggtttgatttcgtcccctctttgaagttcacgatcat 26622965  T
Q  742 ccatgaaggtgtg 754  Q
    | |||||||||||    
T  26622964 caatgaaggtgtg 26622952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 545 - 754
Target Start/End: Complemental strand, 26729142 - 26728930
Alignment:
Q  545 agtaggatccatgccatagaaaacaggcaaaacgacgcgacccttttccttg---cagttaatgatttggacaagttcatccaaacaaaatgacgaagag 641  Q
    ||||||||||| ||||||||| || ||||||||||  |||||||||   |||   |||| |||||| |||||||||||||||||||||||||| ||| |     
T  26729142 agtaggatccacgccatagaagacgggcaaaacgagacgaccctttgttttgtagcagtgaatgatgtggacaagttcatccaaacaaaatgaagaatat 26729043  T
Q  642 gcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggcattgtcgagtgatcttttgatttcatcccctctttgaagttcacgatcat 741  Q
    |||||||||| ||||||||||||||| ||||| ||||||||||| || |||||||| ||||||  ||||||||| |||||||||||||||||||||||||    
T  26729042 gcatagttgggagaaaacacaggaataaaaatcctagactcttcgatagcattgtcaagtgatggtttgatttcgtcccctctttgaagttcacgatcat 26728943  T
Q  742 ccatgaaggtgtg 754  Q
    | |||||||||||    
T  26728942 caatgaaggtgtg 26728930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 10 - 198
Target Start/End: Complemental strand, 26647235 - 26647044
Alignment:
Q  10 cctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacagggt 109  Q
    |||||||||||||||||||||||||| || |||||||||||||||||  ||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  26647235 cctccagtaccataaagtcctaccatatggaccccttcatcagattctttatcaagaagcaatttcacttgttctaatcgggactctaatccaacagggt 26647136  T
Q  110 atttggctacgtgcaaa---acacgttcggtcttgtccaagatgtctctgactatcttcccaataaactcatattcatatctattcacgtcc 198  Q
    |||||||||| || |||   ||||| | | ||||||   ||||||||  ||||||||||||||||||||  |||||||||||||||| ||||    
T  26647135 atttggctacatgtaaaatgacacgattgatcttgttggagatgtcttcgactatcttcccaataaacttgtattcatatctattcatgtcc 26647044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 10 - 198
Target Start/End: Complemental strand, 26753203 - 26753012
Alignment:
Q  10 cctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacagggt 109  Q
    |||||||||||||||||||||||||| || |||||||||||||||||  ||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  26753203 cctccagtaccataaagtcctaccatatggaccccttcatcagattctttatcaagaagcaatttcacttgttctaatcgggactctaatccaacagggt 26753104  T
Q  110 atttggctacgtgcaaa---acacgttcggtcttgtccaagatgtctctgactatcttcccaataaactcatattcatatctattcacgtcc 198  Q
    |||||||||| || |||   ||||| | | ||||||   ||||||||  ||||||||||||||||||||  |||||||||||||||| ||||    
T  26753103 atttggctacatgtaaaatgacacgattgatcttgttggagatgtcttcgactatcttcccaataaacttgtattcatatctattcatgtcc 26753012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 340 - 758
Target Start/End: Complemental strand, 26646875 - 26646451
Alignment:
Q  340 aaattaaagaaagaaaatataaaaaggaatagga---tttatgttaagtggggtacccaggactaaaatggtagcctgacaagttagcagcttggttcag 436  Q
    |||||||| |||||||||||||||||||| |  |   |||| || |||||||||||||||||||| ||||||| || |||||||||||||||||| ||||    
T  26646875 aaattaaataaagaaaatataaaaaggaaaaacaaggtttaagtaaagtggggtacccaggactataatggtatccggacaagttagcagcttgggtcag 26646776  T
Q  437 agcaactttccatctctgcaacctctccatgttatccatatcattttgaaaccttttttcatgcttagcca-atgcttcaccataaatacctctatgatg 535  Q
    ||| |  ||||||   ||||| |  ||| |||| | | | | |||||| || || | ||| |||||||  | ||| |||||||||| | || || |||||    
T  26646775 agccaacttccattgatgcaatcgttccttgtttttcttgttattttggaaactctcttcgtgcttagtgagatg-ttcaccataactcccactttgatg 26646677  T
Q  536 tcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgacccttttccttgcag---ttaatgatttggacaagttcatccaaacaaaat 632  Q
     || |  | ||||||||||| |||||||||||| ||||||||||  |||||||||  |||| ||   | |||||| ||||||||||| ||||||||||||    
T  26646676 ccgtatctgagtaggatccacgccatagaaaacgggcaaaacgagacgaccctttgtcttgtagcaatgaatgatgtggacaagttcgtccaaacaaaat 26646577  T
Q  633 gacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggcattgtcgagtgatcttttgatttcatcccctctttgaagtt 732  Q
       |||||||||||||||  ||||||||||||||| ||||| ||||| ||||||||||| |||  |||||||  | |||||||||| ||||| | ||| |    
T  26646576 ttagaagaggcatagttgatagaaaacacaggaataaaaatcctagattcttcaatggccttgatgagtgatggtgtgatttcatctcctctcttaagat 26646477  T
Q  733 cacgatcatccatgaaggtgtgaatt 758  Q
    ||| |||||| |||||||||||||||    
T  26646476 cacaatcatcaatgaaggtgtgaatt 26646451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 340 - 758
Target Start/End: Complemental strand, 26752843 - 26752419
Alignment:
Q  340 aaattaaagaaagaaaatataaaaaggaatagga---tttatgttaagtggggtacccaggactaaaatggtagcctgacaagttagcagcttggttcag 436  Q
    |||||||| |||||||||||||||||||| |  |   |||| || |||||||||||||||||||| ||||||| || |||||||||||||||||| ||||    
T  26752843 aaattaaataaagaaaatataaaaaggaaaaacaaggtttaagtaaagtggggtacccaggactataatggtatccggacaagttagcagcttgggtcag 26752744  T
Q  437 agcaactttccatctctgcaacctctccatgttatccatatcattttgaaaccttttttcatgcttagcca-atgcttcaccataaatacctctatgatg 535  Q
    ||| |  ||||||   ||||| |  ||| |||| | | | | |||||| || || | ||| |||||||  | ||| |||||||||| | || || |||||    
T  26752743 agccaacttccattgatgcaatcgttccttgtttttcttgttattttggaaactctcttcgtgcttagtgagatg-ttcaccataactcccactttgatg 26752645  T
Q  536 tcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgacccttttccttgcag---ttaatgatttggacaagttcatccaaacaaaat 632  Q
     || |  | ||||||||||| |||||||||||| ||||||||||  |||||||||  |||| ||   | |||||| ||||||||||| ||||||||||||    
T  26752644 ccgtatctgagtaggatccacgccatagaaaacgggcaaaacgagacgaccctttgtcttgtagcaatgaatgatgtggacaagttcgtccaaacaaaat 26752545  T
Q  633 gacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggcattgtcgagtgatcttttgatttcatcccctctttgaagtt 732  Q
       |||||||||||||||  ||||||||||||||| ||||| ||||| ||||||||||| |||  |||||||  | |||||||||| ||||| | ||| |    
T  26752544 ttagaagaggcatagttgatagaaaacacaggaataaaaatcctagattcttcaatggccttgatgagtgatggtgtgatttcatctcctctcttaagat 26752445  T
Q  733 cacgatcatccatgaaggtgtgaatt 758  Q
    ||| |||||| |||||||||||||||    
T  26752444 cacaatcatcaatgaaggtgtgaatt 26752419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 416 - 688
Target Start/End: Original strand, 27427476 - 27427751
Alignment:
Q  416 caagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaaccttttttcatgcttagccaatgcttca 515  Q
    ||||||||||||  |  ||||||| |||||||||  |||||||||||||||||| | | |||||||||||||||| |||||||||| ||||||||||| |    
T  27427476 caagttagcagccagactcagagccactttccattgctgcaacctctccatgtttttcgtatcattttgaaacctattttcatgctcagccaatgcttta 27427575  T
Q  516 ccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgaccct---tttccttgcagttaatgatttgga 612  Q
    |||||  ||||| ||||||||||||||| |||||| ||||  ||| |||||||||||||||||| || |||||   |||  | ||||| |||||| ||||    
T  27427576 ccatacctacctgtatgatgtcgcacatcagtaggttccacaccaaagaaaacaggcaaaacgaggcaacccttggttttgtagcagtgaatgatgtgga 27427675  T
Q  613 caagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaat 688  Q
    |||||   ||||||||| |||| ||||| ||||||||||||||||| |  ||||| ||||| || || ||||||||    
T  27427676 caagtgtgtccaaacaagatgaagaagatgcatagttggcagaaaatatgggaatcaaaatcctggattcttcaat 27427751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 9 - 204
Target Start/End: Complemental strand, 26884827 - 26884629
Alignment:
Q  9 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 108  Q
    ||||||||||||||||| ||||||||||||||||||||| | ||||||| |||||||||||||||| | ||||| ||||||| ||| |||||||||||||    
T  26884827 gcctccagtaccataaattcctaccatgtgtaccccttcgttagattccttatcaagaagcaattttaattgttgtactcggtactgtaatccaacaggg 26884728  T
Q  109 tatttggctacgtgcaa---aacacgttcggtcttgtccaagatgtctctgactatcttcccaataaactcatattcatatctattcacgtccaataag 204  Q
    ||||||||||| || ||   |||||| | | | |||||  |||| |||  |||||||||||| |||||||| ||||| |||||||||| ||||||||||    
T  26884727 tatttggctacatgtaaaacaacacgattgattttgtcggagatatcttcgactatcttcccgataaactcgtattcgtatctattcatgtccaataag 26884629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 9 - 240
Target Start/End: Complemental strand, 25580479 - 25580245
Alignment:
Q  9 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 108  Q
    |||||||||||||||||||||||||||||| ||| | || |||||  |||| ||||||||||||||||||||||||| |||||||| |||||||||||||    
T  25580479 gcctccagtaccataaagtcctaccatgtggaccacatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacaggg 25580380  T
Q  109 tatttggctacgt---gcaaaacacgttcggtcttgtccaagatgtctctgactatcttcccaataaactcatattcatatctattcacgtccaataagt 205  Q
    |||||||||||||     |||||| | | | | ||||   ||||||||  |||||||||| |||||||||  |||||||||||||||  ||||||||||     
T  25580379 tatttggctacgtttaaaaaaacatgattgatattgttggagatgtcttcgactatcttctcaataaacttgtattcatatctattcgtgtccaataaga 25580280  T
Q  206 ttaattagtacacacactacaatcacgatcacatc 240  Q
    | | |||| ||| |||||| |||||  ||||||||    
T  25580279 taagttagaacatacactaaaatcaaaatcacatc 25580245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 317 - 726
Target Start/End: Original strand, 27337833 - 27338248
Alignment:
Q  317 aagatgagattactctagaatagaaattaaagaaa-gaaaatataaaaaggaataggatt--tatgttaagtggggtacccaggactaaaatggtagcct 413  Q
    |||||||||||| |   ||| |||||||||||||| ||||||||||||||||| |  | |  || || |||||||||||||  |||||||||||| |||     
T  27337833 aagatgagattaatggggaaaagaaattaaagaaaagaaaatataaaaaggaaaaataatattaagtaaagtggggtacccttgactaaaatggtggccg 27337932  T
Q  414 gacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaaccttttttcatgcttagcca-atgct 512  Q
    || ||||||||||||||| | ||||| |  |||||| ||| ||||||||||||||| ||| | | |||||| ||| | | |||||||||||  | |||||    
T  27337933 gagaagttagcagcttgggtaagagccatcttccatttcttcaacctctccatgttttccttgttattttggaacttatcttcatgcttagtaagatgct 27338032  T
Q  513 tcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgacccttttccttg---cagttaatgattt 609  Q
     |||||||| | ||  | |||||||| || | ||||||||||   ||||||||||||||||||||    | |||| ||  ||||   |||| |||||| |    
T  27338033 -caccataactcccagtctgatgtcgtacgtgagtaggatccgcaccatagaaaacaggcaaaaccgaacaaccccttgtcttgtagcagtgaatgatgt 27338131  T
Q  610 ggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggcattgtcgagtgatctttt 709  Q
    |||||||||| ||||| |||||||| ||||| |||||||| |||||||| |  ||||| ||||| ||||||||||||||||| ||| | ||||||  | |    
T  27338132 ggacaagttcgtccaagcaaaatgaagaagatgcatagtttgcagaaaatatgggaatcaaaatcctagactcttcaatggccttgacaagtgatggtgt 27338231  T
Q  710 gatttcatcccctcttt 726  Q
    | ||||||| |||||||    
T  27338232 gctttcatctcctcttt 27338248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 317 - 726
Target Start/End: Original strand, 27398573 - 27398988
Alignment:
Q  317 aagatgagattactctagaatagaaattaaagaaa-gaaaatataaaaaggaataggatt--tatgttaagtggggtacccaggactaaaatggtagcct 413  Q
    |||||||||||| |   ||| |||||||||||||| ||||||||||||||||| |  | |  || || |||||||||||||  |||||||||||| |||     
T  27398573 aagatgagattaatggggaaaagaaattaaagaaaagaaaatataaaaaggaaaaataatattaagtaaagtggggtacccttgactaaaatggtggccg 27398672  T
Q  414 gacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaaccttttttcatgcttagcca-atgct 512  Q
    || ||||||||||||||| | ||||| |  |||||| ||| ||||||||||||||| ||| | | |||||| ||| | | |||||||||||  | |||||    
T  27398673 gagaagttagcagcttgggtaagagccatcttccatttcttcaacctctccatgttttccttgttattttggaacttatcttcatgcttagtaagatgct 27398772  T
Q  513 tcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgacccttttccttg---cagttaatgattt 609  Q
     |||||||| | ||  | |||||||| || | ||||||||||   ||||||||||||||||||||    | |||| ||  ||||   |||| |||||| |    
T  27398773 -caccataactcccagtctgatgtcgtacgtgagtaggatccgcaccatagaaaacaggcaaaaccgaacaaccccttgtcttgtagcagtgaatgatgt 27398871  T
Q  610 ggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggcattgtcgagtgatctttt 709  Q
    |||||||||| ||||| |||||||| ||||| |||||||| |||||||| |  ||||| ||||| ||||||||||||||||| ||| | ||||||  | |    
T  27398872 ggacaagttcgtccaagcaaaatgaagaagatgcatagtttgcagaaaatatgggaatcaaaatcctagactcttcaatggccttgacaagtgatggtgt 27398971  T
Q  710 gatttcatcccctcttt 726  Q
    | ||||||| |||||||    
T  27398972 gctttcatctcctcttt 27398988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 9 - 193
Target Start/End: Complemental strand, 26656722 - 26656535
Alignment:
Q  9 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 108  Q
    |||||||||||||||||||||||||||| | ||| | || | |||| || |||||||||||||||||||||||| |||||| |||| |||||||||||||    
T  26656722 gcctccagtaccataaagtcctaccatgagaacctcatccttagatcccttatcaagaagcaatttcacttgttgtactcgagactctaatccaacaggg 26656623  T
Q  109 tatttggctacgtg---caaaacacgttcggtcttgtccaagatgtctctgactatcttcccaataaactcatattcatatctattca 193  Q
    |||||||| || ||    |||||||| | | |||||||  |||||||| ||||||| ||| |||||||||  ||||||||||||||||    
T  26656622 tatttggcaacatgtaaaaaaacacgattgatcttgtcggagatgtctttgactatattctcaataaacttgtattcatatctattca 26656535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 9 - 193
Target Start/End: Complemental strand, 26762693 - 26762506
Alignment:
Q  9 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 108  Q
    |||||||||||||||||||||||||||| | ||| | || | |||| || |||||||||||||||||||||||| |||||| |||| |||||||||||||    
T  26762693 gcctccagtaccataaagtcctaccatgagaacctcatccttagatcccttatcaagaagcaatttcacttgttgtactcgagactctaatccaacaggg 26762594  T
Q  109 tatttggctacgtg---caaaacacgttcggtcttgtccaagatgtctctgactatcttcccaataaactcatattcatatctattca 193  Q
    |||||||| || ||    |||||||| | | |||||||  |||||||| ||||||| ||| |||||||||  ||||||||||||||||    
T  26762593 tatttggcaacatgtaaaaaaacacgattgatcttgtcggagatgtctttgactatattctcaataaacttgtattcatatctattca 26762506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 9 - 122
Target Start/End: Original strand, 27337520 - 27337633
Alignment:
Q  9 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 108  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||||||  ||||||||||||||| ||||||| ||||||||||| |||||||||||||    
T  27337520 gcctctagtaccataaagtcctaccatgttgaccccttcatcagattcctcatcaagaagcaattttacttgttgtactcgggactgtaatccaacaggg 27337619  T
Q  109 tatttggctacgtg 122  Q
    |||||||| |||||    
T  27337620 tatttggcaacgtg 27337633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 9 - 122
Target Start/End: Original strand, 27398260 - 27398373
Alignment:
Q  9 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 108  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||||||  ||||||||||||||| ||||||| ||||||||||| |||||||||||||    
T  27398260 gcctctagtaccataaagtcctaccatgttgaccccttcatcagattcctcatcaagaagcaattttacttgttgtactcgggactgtaatccaacaggg 27398359  T
Q  109 tatttggctacgtg 122  Q
    |||||||| |||||    
T  27398360 tatttggcaacgtg 27398373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 9 - 240
Target Start/End: Complemental strand, 26143625 - 26143391
Alignment:
Q  9 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 108  Q
    ||||||||||||| |||||||||||||| | ||| | || |||||  |||| ||||||||||||||||||| ||||| |||||||| |||||||||||||    
T  26143625 gcctccagtaccaaaaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttcttctattcgggactgtaatccaacaggg 26143526  T
Q  109 tatttggctacgt---gcaaaacacgttcggtcttgtccaagatgtctctgactatcttcccaataaactcatattcatatctattcacgtccaataagt 205  Q
    ||||||||||| |     |||||| | | | | ||||   ||||||||  |||||||||| |||||||||  |||||||||||||||| ||||||||||     
T  26143525 tatttggctacatttaaaaaaacatgattgatattgttggagatgtcttcgactatcttctcaataaacttgtattcatatctattcatgtccaataaga 26143426  T
Q  206 ttaattagtacacacactacaatcacgatcacatc 240  Q
    | |||||| | | |||||| |||||  ||||||||    
T  26143425 taaattagaaaatacactaaaatcaaaatcacatc 26143391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 372 - 724
Target Start/End: Complemental strand, 26656350 - 26655995
Alignment:
Q  372 gatttatgttaagtggggtacccaggactaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttat 471  Q
    |||||| || |||||||||||||  ||||| |||||||||| |||||||| ||||||| | ||||||| |  ||||||  || |||||||| |||||| |    
T  26656350 gatttaagtaaagtggggtacccttgactacaatggtagccagacaagttggcagctttggtcagagccatcttccattgctccaacctctgcatgtttt 26656251  T
Q  472 ccatatcattttgaaaccttttttcatgcttagcca-atgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacag 570  Q
    || | | |||||| ||| | |||||||||||||  | ||||| |||| ||| | ||  | |||||||| |  | |||||||||||  |||||||||||||    
T  26656250 ccttgttattttggaacttcttttcatgcttagtaagatgct-caccgtaacttccagtctgatgtcgtatgtgagtaggatccacaccatagaaaacag 26656152  T
Q  571 gcaaaacgacgcgacccttttcctt---gcagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaat 667  Q
    |||||||    | |||||||  |||   ||| | |||||| ||||||||||| |||||||||||||| ||||| ||||||||||||||||| |  |||||    
T  26656151 gcaaaaccgaacaaccctttgtcttatagcaatgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaat 26656052  T
Q  668 gaaaattctagactcttcaatggcattgtcgagtgatcttttgatttcatcccctct 724  Q
     ||||| || || ||||||||||| ||  ||||||||  | |||||||||| |||||    
T  26656051 aaaaatcctggattcttcaatggccttaacgagtgatggtgtgatttcatctcctct 26655995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 372 - 724
Target Start/End: Complemental strand, 26762321 - 26761966
Alignment:
Q  372 gatttatgttaagtggggtacccaggactaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttat 471  Q
    |||||| || |||||||||||||  ||||| |||||||||| |||||||| ||||||| | ||||||| |  ||||||  || |||||||| |||||| |    
T  26762321 gatttaagtaaagtggggtacccttgactacaatggtagccagacaagttggcagctttggtcagagccatcttccattgctccaacctctgcatgtttt 26762222  T
Q  472 ccatatcattttgaaaccttttttcatgcttagcca-atgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacag 570  Q
    || | | |||||| ||| | |||||||||||||  | ||||| |||| ||| | ||  | |||||||| |  | |||||||||||  |||||||||||||    
T  26762221 ccttgttattttggaacttcttttcatgcttagtaagatgct-caccgtaacttccagtctgatgtcgtatgtgagtaggatccacaccatagaaaacag 26762123  T
Q  571 gcaaaacgacgcgacccttttcctt---gcagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaat 667  Q
    |||||||    | |||||||  |||   ||| | |||||| ||||||||||| |||||||||||||| ||||| ||||||||||||||||| |  |||||    
T  26762122 gcaaaaccgaacaaccctttgtcttatagcaatgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaat 26762023  T
Q  668 gaaaattctagactcttcaatggcattgtcgagtgatcttttgatttcatcccctct 724  Q
     ||||| || || ||||||||||| ||  ||||||||  | |||||||||| |||||    
T  26762022 aaaaatcctggattcttcaatggccttaacgagtgatggtgtgatttcatctcctct 26761966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 9 - 121
Target Start/End: Complemental strand, 25483816 - 25483704
Alignment:
Q  9 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 108  Q
    ||||||||||||| |||||||||||||| | ||| | || |||||  |||| ||||||||||||||||||||||||| |||||||| |||||||||||||    
T  25483816 gcctccagtaccaaaaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacaggg 25483717  T
Q  109 tatttggctacgt 121  Q
    |||||||||||||    
T  25483716 tatttggctacgt 25483704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 340 - 748
Target Start/End: Complemental strand, 25538939 - 25538522
Alignment:
Q  340 aaattaaagaaagaaaatataaaaaggaatag---gatttatgttaagtggggtaccca---ggactaaaatggtagcctgacaagttagcagcttggtt 433  Q
    ||||||| |||| |||||||| ||||||| |    |||||| || ||||||||||||||   |||||| |||| ||||| |||||||||||||||||| |    
T  25538939 aaattaatgaaataaaatatagaaaggaaaaacaagatttaagtaaagtggggtacccatgaggactataatgatagccggacaagttagcagcttggat 25538840  T
Q  434 cagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaaccttttttcatgcttagccaa-tgcttcaccataaatacctctatg 532  Q
     ||||| |  ||||||    |||| | ||||||||| | |  || |||||||||||| | |||||||||||  || |||| |||||||| | || || ||    
T  25538839 aagagctatcttccattgacgcaatcgctccatgtttttctcattattttgaaacctctcttcatgcttagtaaaatgct-caccataactcccactctg 25538741  T
Q  533 atgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgacccttttccttg---cagttaatgatttggacaagttcatccaaacaa 629  Q
    |||||| |  | |||||| ||||   |||||||||| ||||| || | || || ||||  ||||   |||| |||||| ||||||||||| |||||||||    
T  25538740 atgtcgtaactgagtaggttccacatcatagaaaacgggcaatactaagcaactctttgtcttgtagcagtgaatgatctggacaagttcgtccaaacaa 25538641  T
Q  630 aatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggcattgtcgagtgatcttttgatttcatcccctctttgaa 729  Q
    ||||| ||||| ||||||||||||||||| |  ||||| ||||||||||| ||||| ||||| ||| | ||||||  | |||||||||| ||||||| ||    
T  25538640 aatgaagaagatgcatagttggcagaaaatatgggaataaaaattctagattcttcgatggccttgacaagtgatggtgtgatttcatctcctctttcaa 25538541  T
Q  730 gttcacgatcatccatgaa 748  Q
    | |||  |||||| |||||    
T  25538540 gatcattatcatctatgaa 25538522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 341 - 751
Target Start/End: Complemental strand, 25580117 - 25579698
Alignment:
Q  341 aattaaagaaagaaaatataaaaaggaatagga---tttatgttaagtggggtaccca---ggactaaaatggtagcctgacaagttagcagcttggttc 434  Q
    ||||||||||| |||||||| ||||||| | ||   |||| || ||||||||||||||   |||||| |||| ||||| |||||||||||||||||| |     
T  25580117 aattaaagaaataaaatatagaaaggaaaaagaagttttaagtaaagtggggtacccatgaggactataatgatagccggacaagttagcagcttgggta 25580018  T
Q  435 agagcaactttccatctctgcaacctctccatgttatccatatcattttgaaaccttttttcatgcttagcca-atgcttcaccataaatacctctatga 533  Q
    ||||| |  ||||||    |||| | ||||||||| | |   | |||||||||||| | |||||||||||  | || || |||||||| | || || |||    
T  25580017 agagctatcttccattgacgcaatcgctccatgtttttctcgttattttgaaacctctcttcatgcttagtaagatact-caccataactcccactctga 25579919  T
Q  534 tgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgacccttttccttg---cagttaatgatttggacaagttcatccaaacaaa 630  Q
    ||||| |  | |||||| ||||   |||||||||| ||||| || | || || ||||  ||||   |||| |||||| ||||||||||| ||||||||||    
T  25579918 tgtcgtatgtgagtaggttccacatcatagaaaacgggcaatactaagcaactctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaa 25579819  T
Q  631 atgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggcattgtcgagtgatcttttgatttcatcccctctttgaag 730  Q
    |||| ||||| ||||||||||||||||| |  ||||| ||||| ||||| ||||||||||| ||| | ||||||  | |||||||||| |||||||||||    
T  25579818 atgaagaagatgcatagttggcagaaaatatgggaataaaaatcctagattcttcaatggccttgacaagtgatggtgtgatttcatctcctctttgaag 25579719  T
Q  731 ttcacgatcatccatgaaggt 751  Q
     |||  |||||| | ||||||    
T  25579718 atcattatcatcaaagaaggt 25579698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 9 - 204
Target Start/End: Complemental strand, 25539300 - 25539102
Alignment:
Q  9 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 108  Q
    |||||||||||||||||||||||||||| | ||| | || |||||  |||  ||||||||||||||||||||||||| | |||||| |||||||||||||    
T  25539300 gcctccagtaccataaagtcctaccatgcggacctcatcctcagagcccaagtcaagaagcaatttcacttgttctattggggactgtaatccaacaggg 25539201  T
Q  109 tatttggctacgt---gcaaaacacgttcggtcttgtccaagatgtctctgactatcttcccaataaactcatattcatatctattcacgtccaataag 204  Q
    |||||||| || |     |||||| | | | | ||||   ||||||||  |||||||||| |||||||||  |||||||||||||||| ||||||||||    
T  25539200 tatttggccacatataaaaaaacatgattgatattgttggagatgtcttcgactatcttctcaataaacttgtattcatatctattcatgtccaataag 25539102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 512 - 730
Target Start/End: Complemental strand, 25481963 - 25481742
Alignment:
Q  512 ttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgacccttttccttg---cagttaatgatt 608  Q
    |||||||||| ||| | ||||| |||| |||| |||||||||||  ||||||||||| || || || | || || ||||  ||||   |||| ||||||     
T  25481963 ttcaccataactacatgtatgacgtcgaacatcagtaggatccacaccatagaaaacgggtaatactaagcaactctttgtcttgtagcagtgaatgatg 25481864  T
Q  609 tggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggcattgtcgagtgatcttt 708  Q
    ||||||||||| |||||||||||||| ||||| ||||||||||||||||| |  |||||  |||| ||||| ||||||||||| ||| | ||||||  |     
T  25481863 tggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaatacaaatcctagattcttcaatggccttgacaagtgatggtg 25481764  T
Q  709 tgatttcatcccctctttgaag 730  Q
    |||||||||| |||||||||||    
T  25481763 tgatttcatctcctctttgaag 25481742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 64 - 240
Target Start/End: Complemental strand, 25511640 - 25511461
Alignment:
Q  64 agaagcaatttcacttgttctactcgggactttaatccaacagggtatttggctacgtgc---aaaacacgttcggtcttgtccaagatgtctctgacta 160  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||| |   |||||| | | | ||||||   ||||||||  |||||    
T  25511640 agaagcaatttcacttgttctattcgggactgcaatccaacagggtatttggctacgttcaaaaaaacatgattgatcttgttggagatgtcttcgacta 25511541  T
Q  161 tcttcccaataaactcatattcatatctattcacgtccaataagtttaattagtacacacactacaatcacgatcacatc 240  Q
    ||||| |||||||||  |||||| ||||||||| |||||||||| | | |||| ||| |||||| |||||  ||||||||    
T  25511540 tcttctcaataaacttgtattcagatctattcatgtccaataaggtaagttagaacatacactagaatcaaaatcacatc 25511461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 596 - 748
Target Start/End: Complemental strand, 26142999 - 26142847
Alignment:
Q  596 gcagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggcattg 695  Q
    ||||| |||||| ||||||||||| |||||||||||||| ||||| ||||||||||||||||| |  ||||| ||||| ||||| ||||||||||| |||    
T  26142999 gcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctagattcttcaatggccttg 26142900  T
Q  696 tcgagtgatcttttgatttcatcccctctttgaagttcacgatcatccatgaa 748  Q
     | ||||||  | |||||||||| ||||||| ||| |||  |||||| |||||    
T  26142899 acaagtgatggtgtgatttcatctcctctttcaagatcattatcatcaatgaa 26142847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 379 - 691
Target Start/End: Complemental strand, 28243158 - 28242843
Alignment:
Q  379 gttaagtggggtacccaggactaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatc 478  Q
    ||||||||| ||||| || ||| ||||||| ||| || |||||||| | |||  | ||||||   |||||| ||||||||||||||||||||||| |       
T  28243158 gttaagtggtgtacctagaactgaaatggtggccagagaagttagctgtttgagttagagcactcttccatttctgcaacctctccatgttatccgtgct 28243059  T
Q  479 attttgaaaccttttttcatgcttagccaatgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacg 578  Q
    |||||| ||| | |    ||||| ||||| ||||| ||||||| | ||  | ||||||| ||| |||| ||| ||||   |||||||||  ||||||||     
T  28243058 attttggaacttctcaatatgctcagccagtgctttaccataactgccaatctgatgtctcacgttagaaggttccacatcatagaaaattggcaaaact 28242959  T
Q  579 acgcgacccttttccttgcag---ttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattc 675  Q
    | ||| || |||| |||||||   | |||||| ||||||||||| ||||| |||||||| ||||| ||||| |||  ||| || |||||||||||||| |    
T  28242958 aggcgtccatttttcttgcagcagtgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacaggaatgaaaatcc 28242859  T
Q  676 tagactcttcaatggc 691  Q
    ||||||||||||||||    
T  28242858 tagactcttcaatggc 28242843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 31285306 - 31285209
Alignment:
Q  19 ccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacagggtatttggc 116  Q
    |||||||||||||||||||||||||||| || || |||| |||||||||||||||||||||||| || |||  |||| |||||||||||||| |||||    
T  31285306 ccataaagtcctaccatgtgtacccctttattagtttccttatcaagaagcaatttcacttgttgtattcgaaacttaaatccaacagggtaattggc 31285209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 9 - 240
Target Start/End: Complemental strand, 26056679 - 26056445
Alignment:
Q  9 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 108  Q
    |||||| |||||| ||| |||||||||| | ||| | |  |||||  |||| ||||||||||||||||||||||||| ||||||||  ||||||||||||    
T  26056679 gcctccggtaccaaaaattcctaccatgcggacctcattctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgcaatccaacaggg 26056580  T
Q  109 tatttggctacgt---gcaaaacacgttcggtcttgtccaagatgtctctgactatcttcccaataaactcatattcatatctattcacgtccaataagt 205  Q
    |||||||||||||     |||||| | | | ||||||   ||||| ||  |||||||||| |||||||||   ||||| ||||||||| ||||||||||     
T  26056579 tatttggctacgtttaaaaaaacatgattgatcttgttggagatgccttcgactatcttctcaataaacttgcattcagatctattcatgtccaataagg 26056480  T
Q  206 ttaattagtacacacactacaatcacgatcacatc 240  Q
    | | |||| ||| |||||| |||||  ||||||||    
T  26056479 taagttagaacatacactagaatcaaaatcacatc 26056445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 9 - 240
Target Start/End: Complemental strand, 26076649 - 26076415
Alignment:
Q  9 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 108  Q
    |||||| |||||| ||| |||||||||| | ||| | |  |||||  |||| ||||||||||||||||||||||||| ||||||||  ||||||||||||    
T  26076649 gcctccggtaccaaaaattcctaccatgcggacctcattctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgcaatccaacaggg 26076550  T
Q  109 tatttggctacgt---gcaaaacacgttcggtcttgtccaagatgtctctgactatcttcccaataaactcatattcatatctattcacgtccaataagt 205  Q
    |||||||||||||     |||||| | | | ||||||   ||||| ||  |||||||||| |||||||||   ||||| ||||||||| ||||||||||     
T  26076549 tatttggctacgtttaaaaaaacatgattgatcttgttggagatgccttcgactatcttctcaataaacttgcattcagatctattcatgtccaataagg 26076450  T
Q  206 ttaattagtacacacactacaatcacgatcacatc 240  Q
    | | |||| ||| |||||| |||||  ||||||||    
T  26076449 taagttagaacatacactagaatcaaaatcacatc 26076415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 494 - 689
Target Start/End: Complemental strand, 26848899 - 26848701
Alignment:
Q  494 ttcatgcttagccaatgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgacccttttcc 593  Q
    |||||||||||| | ||||||||||||| |||   | ||||||||||||| || ||| || ||||||||||||||||| | ||| | || ||||||||||    
T  26848899 ttcatgcttagcaagtgcttcaccataactactattctgatgtcgcacatgagaaggttctatgccatagaaaacaggaataaccatgctacccttttcc 26848800  T
Q  594 tt---gcagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatg 689  Q
    ||   ||| | |||||| ||||||||||| ||||||||||| || |||| |||||||||  |||| || ||| ||||| |||| || || |||||||||    
T  26848799 ttggagcaatgaatgatgtggacaagttcgtccaaacaaaacgaagaagtggcatagttctcagagaatacaagaatggaaatcctcgagtcttcaatg 26848701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 9 - 116
Target Start/End: Original strand, 25492744 - 25492851
Alignment:
Q  9 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 108  Q
    |||||||||||||||||||||||||||||| | | | || |||||| ||  ||| |||||||||||||| |||| ||||||||| | |||||||||||||    
T  25492744 gcctccagtaccataaagtcctaccatgtggaactcatcctcagatacctcatctagaagcaatttcacgtgttgtactcgggattgtaatccaacaggg 25492843  T
Q  109 tatttggc 116  Q
    ||||||||    
T  25492844 tatttggc 25492851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 596 - 730
Target Start/End: Complemental strand, 26056060 - 26055926
Alignment:
Q  596 gcagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggcattg 695  Q
    ||||| |||||| ||||||||||| |||||||||||||| ||||| ||||||||||||||||| |  ||||| ||||| | ||| ||||| ||||| |||    
T  26056060 gcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcccagattcttcgatggccttg 26055961  T
Q  696 tcgagtgatcttttgatttcatcccctctttgaag 730  Q
     | ||||||  | |||||||||| |||||||||||    
T  26055960 acaagtgatgatgtgatttcatctcctctttgaag 26055926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 596 - 730
Target Start/End: Complemental strand, 26076030 - 26075896
Alignment:
Q  596 gcagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggcattg 695  Q
    ||||| |||||| ||||||||||| |||||||||||||| ||||| ||||||||||||||||| |  ||||| ||||| | ||| ||||| ||||| |||    
T  26076030 gcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcccagattcttcgatggccttg 26075931  T
Q  696 tcgagtgatcttttgatttcatcccctctttgaag 730  Q
     | ||||||  | |||||||||| |||||||||||    
T  26075930 acaagtgatgatgtgatttcatctcctctttgaag 26075896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 10 - 116
Target Start/End: Complemental strand, 26824575 - 26824469
Alignment:
Q  10 cctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacagggt 109  Q
    |||||| |||| |||||||||||||| || ||| | |||||||||||  ||||||||||  |||||||||||| ||||||||||| ||||||||| ||||    
T  26824575 cctccaataccgtaaagtcctaccatatggaccacatcatcagattcgttatcaagaagagatttcacttgttgtactcgggactgtaatccaaccgggt 26824476  T
Q  110 atttggc 116  Q
    |||||||    
T  26824475 atttggc 26824469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 444 - 754
Target Start/End: Complemental strand, 28234852 - 28234540
Alignment:
Q  444 ttccatctctgcaacctctccatgttatccatatcattttgaaaccttttttcatgcttagccaatgcttcaccataaatacctctatgatgtcgcacat 543  Q
    |||||| ||||||||||||||||||||||| | | |||||| ||| | |||  ||| | | ||| ||||| ||||||| | ||  | ||||||||||| |    
T  28234852 ttccatttctgcaacctctccatgttatccttgttattttggaacttctttatatgatcatccagtgctttaccataactgcccttgtgatgtcgcacgt 28234753  T
Q  544 tagtaggatccatgccatagaaaacaggcaaaacgacgcgacccttttccttgcag--ttaatgatttggacaagttcatccaaacaaaatgacgaagag 641  Q
     || ||| ||||   |||||||||  |||||||| | ||| |  ||||||| | ||  | |||||| ||||||||||| ||||| |||||||| |||||     
T  28234752 gagaaggttccacatcatagaaaattggcaaaactaggcgtctattttcctcgaagcataaatgatgtggacaagttcgtccaagcaaaatgaagaagaa 28234653  T
Q  642 gcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggcattgtcgagtgatcttttgatttcatcccctctttgaagttcacgatcat 741  Q
    ||||| |||  ||| || |||||||||||||| ||||||||||||||||| |||   ||||||  | | |||||||| |||| |||||| || |  ||||    
T  28234652 gcataattgatagacaagacaggaatgaaaatcctagactcttcaatggccttgaaaagtgatggtgttatttcatctcctccttgaagctccctgtcat 28234553  T
Q  742 ccatgaaggtgtg 754  Q
    | |||||||||||    
T  28234552 caatgaaggtgtg 28234540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 9 - 116
Target Start/End: Original strand, 27530726 - 27530833
Alignment:
Q  9 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 108  Q
    |||||||||||||||||||||||||||||| ||| | ||||||||||    ||||||| ||  |||||| |||| ||||||||||| ||||||||||||     
T  27530726 gcctccagtaccataaagtcctaccatgtggacctcatcatcagatttttcatcaagatgccctttcacatgttgtactcgggactgtaatccaacagga 27530825  T
Q  109 tatttggc 116  Q
    ||||||||    
T  27530826 tatttggc 27530833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 27717925 - 27718122
Alignment:
Q  10 cctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacagggt 109  Q
    ||||||||||||||||||||||||||||| || || |||||||||     |||||||||| |||||||||||| |||||| ||||  |||||||||||||    
T  27717925 cctccagtaccataaagtcctaccatgtggactccatcatcagatctttcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacagggt 27718024  T
Q  110 atttggctacgtgcaa---aacacgttcggtcttgtccaagatgtctctgactatcttcccaataaactcatattcatatctattcacgtccaataag 204  Q
    | ||||| || || ||      |||   ||||||||   |||||| | |||||||||  ||||||||||| |||||||||||||||| ||||| ||||    
T  27718025 aattggcaacatgtaagggttgacgactggtcttgttggagatgtatttgactatctctccaataaactcgtattcatatctattcatgtccagtaag 27718122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 382 - 691
Target Start/End: Complemental strand, 28185720 - 28185405
Alignment:
Q  382 aagtggggtacccag---gactaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatc 478  Q
    |||||||||||||||   || | ||||||| ||| || |||||||||| |||  | ||||||   |||||| ||||||||||||||||| ||||| | |     
T  28185720 aagtggggtacccagcaggattgaaatggtggccagagaagttagcagtttgagtaagagcactcttccatttctgcaacctctccatgctatccttgtt 28185621  T
Q  479 attttgaaaccttttttcatgcttagccaatgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacg 578  Q
    |||||| ||| | |||  ||| | | ||| ||||| ||||||| | ||  | ||||||||||| | || ||| ||||   |||||||||  ||||||||     
T  28185620 attttggaacttctttatatgatcatccagtgctttaccataactgcccgtgtgatgtcgcacgtgagaaggttccacatcatagaaaattggcaaaact 28185521  T
Q  579 acgcgacccttttccttg---cagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattc 675  Q
    |  || ||  ||||||||   ||||||||||| ||||||||||| ||||| |||||||| ||||| ||||| |||  ||| || || ||||||||||| |    
T  28185520 agacgcccgctttccttgaagcagttaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacgggaatgaaaatcc 28185421  T
Q  676 tagactcttcaatggc 691  Q
    ||||||||||||||||    
T  28185420 tagactcttcaatggc 28185405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 9 - 116
Target Start/End: Complemental strand, 28786995 - 28786888
Alignment:
Q  9 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 108  Q
    |||||||||||||||||||||||||||| | || || ||||||||| |   |||||||||| |||||||||||| |||||| ||||  ||||||||||||    
T  28786995 gcctccagtaccataaagtcctaccatgcggactccatcatcagatccttcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacaggg 28786896  T
Q  109 tatttggc 116  Q
    || |||||    
T  28786895 taattggc 28786888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 9 - 116
Target Start/End: Complemental strand, 28793116 - 28793009
Alignment:
Q  9 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 108  Q
    |||||||||||||||||||||||||||| | || || ||||||||| |   |||||||||| |||||||||||| |||||| ||||  ||||||||||||    
T  28793116 gcctccagtaccataaagtcctaccatgcggactccatcatcagatccttcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacaggg 28793017  T
Q  109 tatttggc 116  Q
    || |||||    
T  28793016 taattggc 28793009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 395 - 521
Target Start/End: Complemental strand, 27214758 - 27214632
Alignment:
Q  395 aggactaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaaccttttt 494  Q
    ||||||| |||| ||||| || ||||||||||||||||| ||||| |  |||||| ||||||||| ||||||||| ||| | | |||||||||||| | |    
T  27214758 aggactataatgatagccagataagttagcagcttggttaagagctatcttccatttctgcaaccgctccatgttttccttgttattttgaaacctctct 27214659  T
Q  495 tcatgcttagccaatgcttcaccataa 521  Q
    ||||||||||| |  ||||||||||||    
T  27214658 tcatgcttagcaagcgcttcaccataa 27214632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 395 - 521
Target Start/End: Original strand, 27234470 - 27234596
Alignment:
Q  395 aggactaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaaccttttt 494  Q
    ||||||| |||| ||||| || ||||||||||||||||| ||||| |  |||||| ||||||||| ||||||||| ||| | | |||||||||||| | |    
T  27234470 aggactataatgatagccagataagttagcagcttggttaagagctatcttccatttctgcaaccgctccatgttttccttgttattttgaaacctctct 27234569  T
Q  495 tcatgcttagccaatgcttcaccataa 521  Q
    ||||||||||| |  ||||||||||||    
T  27234570 tcatgcttagcaagcgcttcaccataa 27234596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 596 - 691
Target Start/End: Complemental strand, 26048979 - 26048884
Alignment:
Q  596 gcagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggc 691  Q
    ||||| |||||| ||||||||||| |||||||||||||| ||||| ||||||||||||||||| |  ||||| ||||| ||||| ||||| |||||    
T  26048979 gcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctagattcttccatggc 26048884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 596 - 691
Target Start/End: Complemental strand, 26070148 - 26070053
Alignment:
Q  596 gcagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggc 691  Q
    ||||| |||||| ||||||||||| |||||||||||||| ||||| ||||||||||||||||| |  ||||| ||||| ||||| ||||| |||||    
T  26070148 gcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctagattcttccatggc 26070053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 596 - 691
Target Start/End: Complemental strand, 28139675 - 28139580
Alignment:
Q  596 gcagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggc 691  Q
    ||||| |||||| ||||||||||| ||||| ||||| || |||||||||||||||   ||||||||||| |||||||| ||||| |||||||||||    
T  28139675 gcagtcaatgatgtggacaagttcgtccaagcaaaacgaagaagaggcatagttgatggaaaacacagggatgaaaatcctagattcttcaatggc 28139580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 596 - 689
Target Start/End: Original strand, 28297766 - 28297859
Alignment:
Q  596 gcagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatg 689  Q
    ||||| |||||| ||||||||||| ||||| |||||||| ||||| ||||| |||| ||| || |||||||||||||| |||| ||||||||||    
T  28297766 gcagtgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattggtagataagacaggaatgaaaatcctagtctcttcaatg 28297859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 596 - 689
Target Start/End: Complemental strand, 28514307 - 28514214
Alignment:
Q  596 gcagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatg 689  Q
    ||||| |||||| ||||||||||| ||||| |||||||| ||||| ||||| |||| ||| || |||||||||||||| |||| ||||||||||    
T  28514307 gcagtgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattggtagataagacaggaatgaaaatcctagtctcttcaatg 28514214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 596 - 691
Target Start/End: Complemental strand, 28181248 - 28181153
Alignment:
Q  596 gcagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggc 691  Q
    ||||| |||||| ||||||||||| ||||| |||||||| ||||| ||||| |||  ||| || || ||||||||||| |||||||||||||||||    
T  28181248 gcagtgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacgggaatgaaaatcctagactcttcaatggc 28181153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 10 - 116
Target Start/End: Original strand, 27610546 - 27610652
Alignment:
Q  10 cctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacagggt 109  Q
    ||||||||||||||||||||||||||||| || || |||||||||     |||||||||| ||||||||| || |||| | ||||  |||||||||||||    
T  27610546 cctccagtaccataaagtcctaccatgtggactccatcatcagatctttcatcaagaagcgatttcacttcttgtacttgagactgcaatccaacagggt 27610645  T
Q  110 atttggc 116  Q
    | |||||    
T  27610646 aattggc 27610652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 602 - 691
Target Start/End: Complemental strand, 2184416 - 2184327
Alignment:
Q  602 aatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggc 691  Q
    |||||| ||||||||||| |||||||||||||| ||||| ||||||||    || || ||||| ||||||||||| ||||||||||||||    
T  2184416 aatgatgtggacaagttcgtccaaacaaaatgaagaagaagcatagttctttgagaaaacagggatgaaaattctggactcttcaatggc 2184327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 479 - 691
Target Start/End: Original strand, 28098302 - 28098517
Alignment:
Q  479 attttgaaaccttttttcatgcttagccaatgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacg 578  Q
    |||||| ||||| | |||||||||||| ||||||||||||||| | ||  | ||||||||||| | || ||| |||| | || | |||| ||| ||||||    
T  28098302 attttggaacctctcttcatgcttagctaatgcttcaccataactccccgtctgatgtcgcacgtgagaaggttccacgtcacaaaaaataggaaaaacg 28098401  T
Q  579 acgcgacccttttccttg---cagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattc 675  Q
    | || ||||||||| | |   | || |||||| |||||||||||||||||||||||  | ||||| ||||||||   ||| || || ||||| ||||| |    
T  28098402 aagcaacccttttcttcgtaacggtgaatgatgtggacaagttcatccaaacaaaacaaagaagaagcatagttcttagagaagaccggaattaaaatcc 28098501  T
Q  676 tagactcttcaatggc 691  Q
    | |||||||| |||||    
T  28098502 tggactcttcgatggc 28098517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 9 - 204
Target Start/End: Complemental strand, 27215209 - 27215011
Alignment:
Q  9 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 108  Q
    ||||||||  |||| ||||||||||||||| ||| |||| | |||| || | |||||||||||||| ||||||| || | |||  | |||||||||||||    
T  27215209 gcctccagctccatgaagtcctaccatgtggacctcttccttagatcccttgtcaagaagcaattttacttgttgtatttgggtatgtaatccaacaggg 27215110  T
Q  109 tatttggctacgtgcaaaa---cacgttcggtcttgtccaagatgtctctgactatcttcccaataaactcatattcatatctattcacgtccaataag 204  Q
    | |||||| || || ||||   |||| |  |||||||   ||||||||   ||||||||| |||||||||  ||||||||||| || | ||||||||||    
T  27215109 tgtttggcaacatgtaaaaaatcacgattcgtcttgtttgagatgtcttcaactatcttctcaataaacttgtattcatatctgttaatgtccaataag 27215011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 623 - 751
Target Start/End: Complemental strand, 27229339 - 27229211
Alignment:
Q  623 caaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggcattgtcgagtgatcttttgatttcatcccct 722  Q
    |||||||||||| ||||| ||||||||||||||||| |  ||||| ||||| | ||| || |||||||| ||| ||||||||  | ||||||| || |||    
T  27229339 caaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatccgagattcgtcaatggccttgacgagtgatggtgtgatttcgtctcct 27229240  T
Q  723 ctttgaagttcacgatcatccatgaaggt 751  Q
    |||||||| |||   ||||| ||||||||    
T  27229239 ctttgaagatcattgtcatcaatgaaggt 27229211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 559 - 754
Target Start/End: Complemental strand, 28150111 - 28149914
Alignment:
Q  559 catagaaaacaggcaaaacgacgcgacccttttccttg---cagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcaga 655  Q
    ||||||||| ||||| ||| | || ||||||| |||||   |||| ||| || ||||||||||| |||||||||||||| ||||| | |||||||  |||    
T  28150111 catagaaaataggcagaactaagcaaccctttgccttgaagcagtgaataatgtggacaagttcgtccaaacaaaatgaagaagaagtatagttgataga 28150012  T
Q  656 aaacacaggaatgaaaattctagactcttcaatggcattgtcgagtgatcttttgatttcatcccctctttgaagttcacgatcatccatgaaggtgtg 754  Q
     || |  ||||||||||| || |||||||||||||| |||  |||||||  | ||||||| ||||||| || ||| ||   |||||| |||||||||||    
T  28150011 gaagattggaatgaaaatcctggactcttcaatggccttg-agagtgatggtgtgatttcgtcccctcgttaaagctccgtatcatcaatgaaggtgtg 28149914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 602 - 758
Target Start/End: Complemental strand, 28227078 - 28226922
Alignment:
Q  602 aatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggcattgtcgagt 701  Q
    |||||| ||||||||||| ||||| |||||||| ||||| ||||| |||  ||| || |||||||||||||| ||||| ||||||||| | |||   |||    
T  28227078 aatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacaggaatgaaaatcctagattcttcaatgaccttgaaaagt 28226979  T
Q  702 gatcttttgatttcatcccctctttgaagttcacgatcatccatgaaggtgtgaatt 758  Q
    |||  | | |||||||| |||| |||||| || | |||||| | ||| |||||||||    
T  28226978 gatgatgttatttcatcacctccttgaagctctctatcatcaaagaatgtgtgaatt 28226922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 379 - 691
Target Start/End: Complemental strand, 28325831 - 28325520
Alignment:
Q  379 gttaagtggggtacccaggactaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatc 478  Q
    ||||||| || ||||||||||| ||||||| |||||| |||||||||| |||  | ||||| |  |||||| ||||||||||||||||| ||||| |       
T  28325831 gttaagtaggttacccaggactgaaatggtggcctgagaagttagcagtttgagtaagagccatcttccatttctgcaacctctccatgctatccgtgct 28325732  T
Q  479 attttgaaaccttttttcatgcttagccaatgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacg 578  Q
    |||    ||||| |    |||||  |||| ||||| ||||||| | ||  | ||||||||||| | || ||| ||||   | |||||||| ||| ||||     
T  28325731 att----aacctctcaatatgctcggccagtgctttaccataactgcccttgtgatgtcgcacgtgagaaggttccacatcgtagaaaactggctaaact 28325636  T
Q  579 acgcgacccttttccttg---cagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattc 675  Q
    | ||| || ||||| |||   |||| ||| || ||||||||||||||||| ||||| || ||||| ||||| |||  ||| || | |||||||||||| |    
T  28325635 aggcgcccattttctttgaagcagtgaataatgtggacaagttcatccaagcaaaaggaagaagaagcataattgatagacaaaataggaatgaaaatcc 28325536  T
Q  676 tagactcttcaatggc 691  Q
    ||||||||||||||||    
T  28325535 tagactcttcaatggc 28325520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 116
Target Start/End: Complemental strand, 28781858 - 28781751
Alignment:
Q  9 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 108  Q
    |||||||||||||||||||||||||||    || || | |||| || |   | |||||||| |||||||||||| ||||||||||| |||||||||||||    
T  28781858 gcctccagtaccataaagtcctaccatcctgactccattatcatatccttcaccaagaagcgatttcacttgttgtactcgggactgtaatccaacaggg 28781759  T
Q  109 tatttggc 116  Q
    || |||||    
T  28781758 taattggc 28781751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 116
Target Start/End: Original strand, 27604130 - 27604236
Alignment:
Q  10 cctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacagggt 109  Q
    ||||||||||||||||||||||||||||| || || |||||||||     |||||||||  |||||||||||| |||||| ||||  ||||||| ||| |    
T  27604130 cctccagtaccataaagtcctaccatgtggactccatcatcagatctttcatcaagaagagatttcacttgttgtactcgagactgcaatccaataggat 27604229  T
Q  110 atttggc 116  Q
    | |||||    
T  27604230 aattggc 27604236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 27427037 - 27427138
Alignment:
Q  9 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 108  Q
    ||||||| | ||||||| ||| ||||| || ||||| ||||||| | ||  |||||||||| |||||||||||| |||||| ||||  ||||||||||||    
T  27427037 gcctccaatcccataaattccaaccatatggaccccatcatcaggtccctcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacaggg 27427136  T
Q  109 ta 110  Q
    ||    
T  27427137 ta 27427138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 204
Target Start/End: Original strand, 27530868 - 27530924
Alignment:
Q  148 atgtctctgactatcttcccaataaactcatattcatatctattcacgtccaataag 204  Q
    ||||||  ||||||||| ||||||||||| |||||||||||||||| ||||||||||    
T  27530868 atgtcttcgactatctttccaataaactcgtattcatatctattcatgtccaataag 27530924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 27679706 - 27679606
Alignment:
Q  10 cctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacagggt 109  Q
    |||||| | ||||||| ||| ||||| || ||||| ||||| ||| ||  |||||||||| |||||||||||| |||||| ||||  |||||||||||||    
T  27679706 cctccaatgccataaattccaaccatatggaccccatcatcggatccctcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacagggt 27679607  T
Q  110 a 110  Q
    |    
T  27679606 a 27679606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 26624028 - 26623835
Alignment:
Q  9 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 108  Q
    ||||||| | ||||| | ||| ||||| || ||||| ||||||||| |  ||||||||||  |||||||||||| || | | |||| |||||||||||||    
T  26624028 gcctccaatcccatacattccaaccatatggaccccatcatcagatccattatcaagaagtgatttcacttgttgtagttgagactgtaatccaacaggg 26623929  T
Q  109 tatttggctacgtgcaa---aacacgttcggtcttgtccaagatgtctctgactatcttcccaataaactcatattcatatctattcacgtcca 199  Q
    ||||| || || || ||    ||||| | | ||||||   |||||| | ||||||||||  ||||||| |||||||||||||| |||| |||||    
T  26623928 tatttagcaacatgtaagggcacacgattgatcttgttggagatgtatttgactatcttttcaataaaatcatattcatatctgttcatgtcca 26623835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 26730005 - 26729812
Alignment:
Q  9 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 108  Q
    ||||||| | ||||| | ||| ||||| || ||||| ||||||||| |  ||||||||||  |||||||||||| || | | |||| |||||||||||||    
T  26730005 gcctccaatcccatacattccaaccatatggaccccatcatcagatccattatcaagaagtgatttcacttgttgtagttgagactgtaatccaacaggg 26729906  T
Q  109 tatttggctacgtgcaa---aacacgttcggtcttgtccaagatgtctctgactatcttcccaataaactcatattcatatctattcacgtcca 199  Q
    ||||| || || || ||    ||||| | | ||||||   |||||| | ||||||||||  ||||||| |||||||||||||| |||| |||||    
T  26729905 tatttagcaacatgtaagggcacacgattgatcttgttggagatgtatttgactatcttttcaataaaatcatattcatatctgttcatgtcca 26729812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 612 - 726
Target Start/End: Original strand, 25506978 - 25507092
Alignment:
Q  612 acaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggcattgtcgagtgatcttttga 711  Q
    |||||||| ||||||||||||   |||||||||||||||  |||||  || ||||| ||||| ||||| |||||||||||  || ||| ||||  | |||    
T  25506978 acaagttcctccaaacaaaattttgaagaggcatagttgatagaaagaaccggaataaaaatcctagattcttcaatggcgatgacgactgatggtgtga 25507077  T
Q  712 tttcatcccctcttt 726  Q
    ||||||| |||||||    
T  25507078 tttcatctcctcttt 25507092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 387 - 648
Target Start/End: Complemental strand, 26975398 - 26975134
Alignment:
Q  387 gggtacccaggactaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaa 486  Q
    ||||||||| || | ||||||| ||| || ||||||||||||||||| |||||    |||||| |  |||||| ||||| ||| ||  | | ||||||||    
T  26975398 gggtacccaagattgaaatggtggccagataagttagcagcttggttaagagctttcttccatttaagcaaccgctccaagttttcatttttattttgaa 26975299  T
Q  487 accttttttcatgcttagccaatgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgacc 586  Q
    |||  | |||||||||||| | | ||||||||||| |  |  |  | |  ||||||| || ||| ||  |||||||||||||||| | ||| | || |||    
T  26975298 acccctcttcatgcttagcaagtacttcaccataactgtcattcagtttacgcacatgagaaggttctgtgccatagaaaacaggaataactatgctacc 26975199  T
Q  587 cttttccttg---cagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagt 648  Q
    |||||| |||   || | |||||| ||||||||||| |||||||||||||| ||||| |||||||    
T  26975198 cttttcattggaacaatgaatgatgtggacaagttcgtccaaacaaaatgaagaagaagcatagt 26975134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #84
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 602 - 691
Target Start/End: Complemental strand, 2185026 - 2184937
Alignment:
Q  602 aatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggc 691  Q
    |||||| ||||||||||| |||||||||||||| ||||| |||||||     || || ||||| ||||||||||| || |||||||||||    
T  2185026 aatgatatggacaagttcgtccaaacaaaatgaagaagaagcatagtcctttgagaaaacagggatgaaaattctggattcttcaatggc 2184937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #85
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 631
Target Start/End: Complemental strand, 26636036 - 26635789
Alignment:
Q  387 gggtacccaggactaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaa 486  Q
    ||||||||| || | ||||||| ||| || ||||||||||||||||| |||||    |||||| || |||||| ||||||||| ||| |   ||||||||    
T  26636036 gggtacccaagattgaaatggtggccagataagttagcagcttggttaagagctttcttccatttcagcaaccactccatgttttccttgctattttgaa 26635937  T
Q  487 accttttttcatgcttagccaatgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgacc 586  Q
    ||   | |||||||||||| |  |||||||||||| |  |  |  | | |||||||| || ||| ||  |||||||||||||||| | |||   || |||    
T  26635936 actgatcttcatgcttagcaagcgcttcaccataactgtcatttagttttcgcacatgagaaggttcggtgccatagaaaacaggaataaccttgctacc 26635837  T
Q  587 cttttcctt---gcagttaatgatttggacaagttcatccaaacaaaa 631  Q
    |||||| ||   ||| | |||||| |||||||||||||||||||||||    
T  26635836 cttttcattggagcaatgaatgatgtggacaagttcatccaaacaaaa 26635789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #86
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 631
Target Start/End: Complemental strand, 26742002 - 26741755
Alignment:
Q  387 gggtacccaggactaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaa 486  Q
    ||||||||| || | ||||||| ||| || ||||||||||||||||| |||||    |||||| || |||||| ||||||||| ||| |   ||||||||    
T  26742002 gggtacccaagattgaaatggtggccagataagttagcagcttggttaagagctttcttccatttcagcaaccactccatgttttccttgctattttgaa 26741903  T
Q  487 accttttttcatgcttagccaatgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgacc 586  Q
    ||   | |||||||||||| |  |||||||||||| |  |  |  | | |||||||| || ||| ||  |||||||||||||||| | |||   || |||    
T  26741902 actgatcttcatgcttagcaagcgcttcaccataactgtcatttagttttcgcacatgagaaggttcggtgccatagaaaacaggaataaccttgctacc 26741803  T
Q  587 cttttcctt---gcagttaatgatttggacaagttcatccaaacaaaa 631  Q
    |||||| ||   ||| | |||||| |||||||||||||||||||||||    
T  26741802 cttttcattggagcaatgaatgatgtggacaagttcatccaaacaaaa 26741755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #87
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 27427177 - 27427234
Alignment:
Q  146 agatgtctctgactatcttcccaataaactcatattcatatctattcacgtccaataa 203  Q
    |||||| | |||||||||| ||||||| ||| |||||||||||||||| |||||||||    
T  27427177 agatgtatttgactatctttccaataagctcgtattcatatctattcatgtccaataa 27427234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #88
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 27592446 - 27592547
Alignment:
Q  9 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 108  Q
    ||||||| | ||||||| ||| ||||| || ||||| | ||||||| |   |||||||||| |||||||||||| |||||| ||||  ||||||||||||    
T  27592446 gcctccaatcccataaattccaaccatatggaccccatgatcagatccttcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacaggg 27592545  T
Q  109 ta 110  Q
    ||    
T  27592546 ta 27592547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #89
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 382 - 471
Target Start/End: Original strand, 28297549 - 28297638
Alignment:
Q  382 aagtggggtacccaggactaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttat 471  Q
    |||||||||||| |||| | ||||||| ||| || |||||||||| |||  | ||||||   |||||| |||||||||||||||||||||    
T  28297549 aagtggggtacctaggattgaaatggtggccagagaagttagcagtttgagtaagagcactcttccatttctgcaacctctccatgttat 28297638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #90
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 382 - 471
Target Start/End: Complemental strand, 28514524 - 28514435
Alignment:
Q  382 aagtggggtacccaggactaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttat 471  Q
    |||||||||||| |||| | ||||||| ||| || |||||||||| |||  | ||||||   |||||| |||||||||||||||||||||    
T  28514524 aagtggggtacctaggattgaaatggtggccagagaagttagcagtttgagtaagagcactcttccatttctgcaacctctccatgttat 28514435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #91
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 531 - 649
Target Start/End: Complemental strand, 26811711 - 26811590
Alignment:
Q  531 tgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgacccttttcctt---gcagttaatgatttggacaagttcatccaaac 627  Q
    ||||||||||| | || ||| ||||  ||||||||||| || | ||| | |||||| ||||||||   | |||||||||| |||||||| ||||| ||||    
T  26811711 tgatgtcgcacgtgagaaggttccacaccatagaaaactggtagaacaaggcgacctttttccttgaagtagttaatgatgtggacaagctcatctaaac 26811612  T
Q  628 aaaatgacgaagaggcatagtt 649  Q
    |||| |||||||  ||||||||    
T  26811611 aaaacgacgaagttgcatagtt 26811590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #92
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 204
Target Start/End: Original strand, 27604280 - 27604327
Alignment:
Q  157 actatcttcccaataaactcatattcatatctattcacgtccaataag 204  Q
    |||||||| ||||||| ||| |||||||||||||||| ||||||||||    
T  27604280 actatctttccaataagctcgtattcatatctattcatgtccaataag 27604327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #93
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 596 - 650
Target Start/End: Complemental strand, 26937228 - 26937174
Alignment:
Q  596 gcagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttg 650  Q
    ||||| || ||| ||||||||||| |||||||||||||| |||| ||||||||||    
T  26937228 gcagtcaacgatgtggacaagttcgtccaaacaaaatgaagaagtggcatagttg 26937174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #94
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 387 - 521
Target Start/End: Complemental strand, 26959512 - 26959378
Alignment:
Q  387 gggtacccaggactaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaa 486  Q
    ||||||||| || | ||||||| ||| || ||||||||||||||||| |||||    |||||| || |||||| ||||||||| ||| |   ||||||||    
T  26959512 gggtacccaagattgaaatggtggccagataagttagcagcttggttaagagctttcttccatttcagcaaccgctccatgttttccttgctattttgaa 26959413  T
Q  487 accttttttcatgcttagccaatgcttcaccataa 521  Q
    ||   | |||||||||||| |  ||||||||||||    
T  26959412 actgctcttcatgcttagcaagcgcttcaccataa 26959378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #95
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 26803203 - 26803102
Alignment:
Q  9 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 108  Q
    ||||||| | ||||||| ||| ||||| || ||||| ||||||| | ||  |||||||||| ||||||||| || |||||| || |  ||||||||||||    
T  26803203 gcctccaatcccataaattccaaccatatggaccccatcatcaggtccctcatcaagaagcgatttcacttcttgtactcgagagtgcaatccaacaggg 26803104  T
Q  109 ta 110  Q
    ||    
T  26803103 ta 26803102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #96
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 389 - 470
Target Start/End: Complemental strand, 26937450 - 26937369
Alignment:
Q  389 gtacccaggactaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgtta 470  Q
    ||||||| || | ||||||| ||| |||||||| || |||||||| ||||| |  |||||| || |||||||||||||||||    
T  26937450 gtacccaagattgaaatggtggccagacaagtttgccgcttggttaagagctatcttccatttccgcaacctctccatgtta 26937369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #97
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 557 - 649
Target Start/End: Complemental strand, 27214593 - 27214498
Alignment:
Q  557 gccatagaaaacaggcaaaacgacgcgacccttttccttgcag---ttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagtt 649  Q
    ||||||||||||||| | ||| | |||||| ||||||||| ||   | | |||| ||||||||||| |||||||||||||| ||||  ||||||||    
T  27214593 gccatagaaaacaggtagaacaaggcgacctttttccttggagcaatgagtgatgtggacaagttcgtccaaacaaaatgaagaagtagcatagtt 27214498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #98
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 557 - 649
Target Start/End: Original strand, 27234635 - 27234730
Alignment:
Q  557 gccatagaaaacaggcaaaacgacgcgacccttttccttgcag---ttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagtt 649  Q
    ||||||||||||||| | ||| | |||||| ||||||||| ||   | | |||| ||||||||||| |||||||||||||| ||||  ||||||||    
T  27234635 gccatagaaaacaggtagaacaaggcgacctttttccttggagcaatgagtgatgtggacaagttcgtccaaacaaaatgaagaagtagcatagtt 27234730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #99
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 444 - 521
Target Start/End: Original strand, 27665015 - 27665092
Alignment:
Q  444 ttccatctctgcaacctctccatgttatccatatcattttgaaaccttttttcatgcttagccaatgcttcaccataa 521  Q
    |||||| || |||||| ||||||||| ||||| ||||||||||||     |||||||||||| | |||||||||||||    
T  27665015 ttccatttcagcaaccgctccatgttttccatgtcattttgaaactccacttcatgcttagcaagtgcttcaccataa 27665092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #100
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 27677045 - 27677146
Alignment:
Q  9 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 108  Q
    ||||||| | ||||||| ||| ||||| || ||||| | ||||||| |   |||||||||| |||||| ||||| |||||| ||||  ||||||||||||    
T  27677045 gcctccaatcccataaattccaaccatatggaccccatgatcagatccttcatcaagaagcgatttcatttgttgtactcgagactgcaatccaacaggg 27677144  T
Q  109 ta 110  Q
    ||    
T  27677145 ta 27677146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #101
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 27705829 - 27705930
Alignment:
Q  9 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 108  Q
    ||||||| | ||| ||| ||| ||||| || ||||| ||||||| | ||  |||||||||  |||||||||||| |||||| ||||  ||||||||||||    
T  27705829 gcctccaatgccaaaaattccaaccatatggaccccatcatcaggtccctcatcaagaagtgatttcacttgttgtactcgagactgcaatccaacaggg 27705928  T
Q  109 ta 110  Q
    ||    
T  27705929 ta 27705930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #102
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 192
Target Start/End: Original strand, 28297314 - 28297351
Alignment:
Q  155 tgactatcttcccaataaactcatattcatatctattc 192  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  28297314 tgactatcttctcaataaactcatattcatatccattc 28297351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #103
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 192
Target Start/End: Complemental strand, 28514759 - 28514722
Alignment:
Q  155 tgactatcttcccaataaactcatattcatatctattc 192  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  28514759 tgactatcttctcaataaactcatattcatatccattc 28514722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 142; Significance: 4e-74; HSPs: 3)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 395 - 751
Target Start/End: Original strand, 14205 - 14563
Alignment:
Q  395 aggactaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaaccttttt 494  Q
    |||||||  ||||||||| |||||||||||||| ||| |||||||  ||||||||| |||||||||||||||||| | |  ||||||||||||||| |||    
T  14205 aggactatcatggtagccggacaagttagcagcctggctcagagcctctttccatccctgcaacctctccatgtttttcggatcattttgaaacctcttt 14304  T
Q  495 tcatgcttagccaatgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgacccttttcct 594  Q
    ||||||| ||||||||||||||||||| ||||| | ||||||||||| |||||||| |||| |||  |||||||||||||||||| ||||||||||  ||    
T  14305 tcatgctcagccaatgcttcaccataactacctttctgatgtcgcacgttagtaggttccacgccgaagaaaacaggcaaaacgaggcgaccctttgtct 14404  T
Q  595 t---gcagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggc 691  Q
    |   ||||| ||| || ||||||||||| ||||||||||| || ||| |||||||||||  ||||||||||||||| ||||| ||||| || ||||||||    
T  14405 tgtagcagtgaattatgtggacaagttcgtccaaacaaaacgaagaa-aggcatagttgatagaaaacacaggaataaaaatcctagattcatcaatggc 14503  T
Q  692 attgtcgagtgatcttttgatttcatcccctctttgaagttcacgatcatccatgaaggt 751  Q
     |||  |||||||  | |||||||||| ||||||||||| |||   ||||| ||||||||    
T  14504 cttgaggagtgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggt 14563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 395 - 751
Target Start/End: Original strand, 3269 - 3630
Alignment:
Q  395 aggactaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatc-catatcattttgaaacctttt 493  Q
    |||||||  ||||||||| |||||||||||||| ||| ||||||| |||||||||| |||||||||||||||||| |  |  ||||||||||||||| ||    
T  3269 aggactatcatggtagccggacaagttagcagcctggctcagagccactttccatcgctgcaacctctccatgttttttcggatcattttgaaacctctt 3368  T
Q  494 ttcatgcttagccaatgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgacccttttcc 593  Q
    |||||||| ||||||||||||||||||| ||||| || ||||||||||| ||||||| ||||  ||| | |||||||||| ||||| ||||||||||  |    
T  3369 ttcatgctcagccaatgcttcaccataactacctttacgatgtcgcacaatagtaggttccacaccaaataaaacaggcagaacgaggcgaccctttgtc 3468  T
Q  594 tt---gcagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcata-gttggcagaaaacacaggaatgaaaattctagactcttcaatg 689  Q
    ||   ||||| |||||| ||||||||||| |||||||||||||| ||||||||||| ||||  ||||||||||||||| ||||| ||||| || ||||||    
T  3469 ttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcataggttgatagaaaacacaggaataaaaatcctagattcatcaatg 3568  T
Q  690 gcattgtcgagtgatcttttgatttcatcccctctttgaagttcacgatcatccatgaaggt 751  Q
    || |||  |||||||  | |||||||||| ||||||||||| |||   ||||| ||||||||    
T  3569 gccttgaggagtgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggt 3630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 2965 - 3162
Alignment:
Q  10 cctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacagggt 109  Q
    ||||||||||||||||||||||||||||| || || |||||||||     |||||||||| |||||||||||| |||||| ||||| | |||||||||||    
T  2965 cctccagtaccataaagtcctaccatgtggactccatcatcagatctttcatcaagaagcgatttcacttgttgtactcgagacttcattccaacagggt 3064  T
Q  110 atttggctacgtgcaa---aacacgttcggtcttgtccaagatgtctctgactatcttcccaataaactcatattcatatctattcacgtccaataag 204  Q
    | ||||| || || ||      |||   ||||||||   |||||| | |||||||||  ||||||||||| |||||||||||||||| ||||| ||||    
T  3065 aattggcaacatgtaagggttgacgactggtcttgttggagatgtatttgactatctctccaataaactcgtattcatatctattcatgtccagtaag 3162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 136; Significance: 2e-70; HSPs: 4)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 389 - 751
Target Start/End: Original strand, 4514 - 4879
Alignment:
Q  389 gtacccaggactaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaac 488  Q
    ||||||| ||||| |||||||||| |||||||||||||||||| ||||||| |  ||||||   ||||||||||||||||||| | ||||||||||||||    
T  4514 gtacccatgactagaatggtagccggacaagttagcagcttgggtcagagccaacttccattgatgcaacctctccatgttattcttatcattttgaaac 4613  T
Q  489 cttttttcatgcttagccaatgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgaccct 588  Q
    || |||||||||| ||||||||||||||||||| ||||| |  |||||||||| |||||||| |||| |||  |||||||||||||||||| ||||||||    
T  4614 ctcttttcatgctcagccaatgcttcaccataactacctttcagatgtcgcacgttagtaggttccacgccgaagaaaacaggcaaaacgaggcgaccct 4713  T
Q  589 tttcctt---gcagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttc 685  Q
    ||  |||   ||||| ||| || ||||||||||| ||||||||||| || ||| ||||||||  |  ||||||||||||||| ||||| ||||| || ||    
T  4714 ttgtcttgtagcagtgaattatgtggacaagttcgtccaaacaaaacgaagaaaaggcatagaagatagaaaacacaggaataaaaatcctagattcatc 4813  T
Q  686 aatggcattgtcgagtgatcttttgatttcatcccctctttgaagttcacgatcatccatgaaggt 751  Q
    |||||| |||  ||| |||  | |||||||||| ||||||||||| |||   ||||| ||||||||    
T  4814 aatggccttgcggagggatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggt 4879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 389 - 751
Target Start/End: Original strand, 13475 - 13840
Alignment:
Q  389 gtacccaggactaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaac 488  Q
    ||||||| ||||| |||||||||| |||||||||||||||||| ||||||| |  ||||||   ||||| | ||||||||||| | ||||||||||||||    
T  13475 gtacccatgactagaatggtagccggacaagttagcagcttgggtcagagccaacttccattgatgcaatcgctccatgttattcttatcattttgaaac 13574  T
Q  489 cttttttcatgcttagccaatgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgaccct 588  Q
    || ||||||||   |||||||||||||||||||  |||| |||||||||||||||||||||||||||  ||| |||||||||||||||||| |||||| |    
T  13575 ctcttttcatgtccagccaatgcttcaccataacgacctgtatgatgtcgcacattagtaggatccacaccaaagaaaacaggcaaaacgaggcgacctt 13674  T
Q  589 tttcctt---gcagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttc 685  Q
    ||  |||   ||| | ||| || || |||||||| ||||| ||||||   |||| ||| ||||||  ||||||||||||||| ||||| ||||| |||||    
T  13675 ttgtcttgtagcaatgaataatgtgaacaagttcgtccaagcaaaattttgaagtggcgtagttgatagaaaacacaggaataaaaatcctagattcttc 13774  T
Q  686 aatggcattgtcgagtgatcttttgatttcatcccctctttgaagttcacgatcatccatgaaggt 751  Q
     ||||| |||  |||||||  | |||||||||| ||||||||||| |||   ||||| ||||||||    
T  13775 gatggccttgaggagtgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggt 13840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #3
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 9 - 116
Target Start/End: Original strand, 13100 - 13207
Alignment:
Q  9 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 108  Q
    |||||||||||||||||||||||||||||| || || ||||||||| |   |||||||||| ||||||| |||| |||||| |||| |||||||||||||    
T  13100 gcctccagtaccataaagtcctaccatgtggactccatcatcagatccttcatcaagaagcgatttcacatgttgtactcgagactgtaatccaacaggg 13199  T
Q  109 tatttggc 116  Q
    || |||||    
T  13200 taattggc 13207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 9 - 116
Target Start/End: Original strand, 4137 - 4244
Alignment:
Q  9 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 108  Q
    ||||||||||||||||||||||||||||||  | || | ||||||| |   |||||||||| ||||||| |||| |||||| |||| |||||||||||||    
T  4137 gcctccagtaccataaagtcctaccatgtgggctccatgatcagatccttcatcaagaagcgatttcacatgttgtactcgagactgtaatccaacaggg 4236  T
Q  109 tatttggc 116  Q
    || |||||    
T  4237 taattggc 4244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 136; Significance: 2e-70; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 389 - 754
Target Start/End: Original strand, 268187 - 268555
Alignment:
Q  389 gtacccaggactaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaac 488  Q
    ||||||| ||||| |||||||||| |||||||||| ||||||| ||||||| |  ||||||   ||||||| ||||||||| | | |   |||||| ||     
T  268187 gtacccacgactagaatggtagccagacaagttagaagcttgggtcagagccaacttccattgatgcaaccgctccatgtttttcttgctattttggaaa 268286  T
Q  489 cttttttcatgcttagcca-atgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgaccc 587  Q
    || | ||| |||||||  | ||| |||||||||| | || || |||||||| |  | ||||||||||| ||||||||| || ||||||| ||  ||||||    
T  268287 ctctcttcgtgcttagtgagatg-ttcaccataactcccactttgatgtcgtatgtgagtaggatccacgccatagaagacgggcaaaatgagacgaccc 268385  T
Q  588 ttttccttg---cagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactctt 684  Q
    |||| ||||   |||| |||||| ||||||||||| |||||||||||||| |||||||||||||||  ||||||||||||||| ||||| ||||||||||    
T  268386 tttttcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactctt 268485  T
Q  685 caatggcattgtcgagtgatcttttgatttcatcccctctttgaagttcacgatcatccatgaaggtgtg 754  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||    
T  268486 caatggcattgtcgagtgatggtttgatttcatcccctctttgaagttcacgatcatcaatgaaggtgtg 268555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 387 - 691
Target Start/End: Original strand, 28127507 - 28127814
Alignment:
Q  387 gggtacccaggactaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaa 486  Q
    |||||||| |||||| |||||||||| |||||||||||||||||| | ||||| |  ||||||   ||||| | ||||||||| | | | | |||||| |    
T  28127507 gggtaccctggactataatggtagccggacaagttagcagcttgggttagagctatcttccattggtgcaatcgctccatgtttttcttgttattttgga 28127606  T
Q  487 accttttttcatgcttagccaatgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgacc 586  Q
    |||| | | |||||||||| |   ||||||||||| | ||| |||||| |||||||| ||||||||||| |||| |||||||||||||||| | ||||||    
T  28127607 acctctctccatgcttagcaagctcttcaccataactccctgtatgatatcgcacatcagtaggatccacgccaaagaaaacaggcaaaactaggcgacc 28127706  T
Q  587 cttttccttg---cagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactct 683  Q
    ||||  ||||   |||| |||||| || |||||||| |||||||||||||| |||||||||||||||| |||||| |||||||| ||||||||||| |||    
T  28127707 ctttgtcttgtagcagtgaatgatgtgcacaagttcgtccaaacaaaatgaagaagaggcatagttggtagaaaatacaggaataaaaattctagattct 28127806  T
Q  684 tcaatggc 691  Q
    ||||||||    
T  28127807 tcaatggc 28127814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 388 - 758
Target Start/End: Original strand, 28164192 - 28164564
Alignment:
Q  388 ggtacccaggactaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaa 487  Q
    ||||||| |||||| |||||||||| |||||||||||||||||| | ||||| |  ||||||   ||||| | ||||||||| | | | | |||||| ||    
T  28164192 ggtaccctggactataatggtagccggacaagttagcagcttgggttagagctatcttccattggtgcaatcgctccatgtttttcttgttattttggaa 28164291  T
Q  488 ccttttttcatgcttagccaatgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgaccc 587  Q
    ||| |   |||||||||  |   |||  |||||| | ||| ||||||||||||||| ||||||||||| |||| |||||||||||||||| | |||||||    
T  28164292 cctctcaccatgcttagtaagatctttgccataactccctgtatgatgtcgcacatcagtaggatccacgcca-agaaaacaggcaaaactaggcgaccc 28164390  T
Q  588 ttttccttg---cagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactctt 684  Q
    |||  ||||   |||| |||||| ||||||||||| |||||||||||||| |||||||||||||||  ||| ||||||||||| ||||||| ||| | ||    
T  28164391 tttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagataacacaggaataaaaattcaagattttt 28164490  T
Q  685 caatggcattgtcgagtgatcttttgatttcatcccctctttgaagttcacgatcatccatgaaggtgtgaatt 758  Q
    ||||||| |||  || |||   | ||||||| || ||||| | ||| |||| |||||| ||||| |||||||||    
T  28164491 caatggccttgatgaatgacggtgtgatttcttctcctctctcaagatcacaatcatcaatgaatgtgtgaatt 28164564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 9 - 222
Target Start/End: Original strand, 28127100 - 28127316
Alignment:
Q  9 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 108  Q
    ||||||| |||||||||||||||||||||| ||| | |||||| || || |||| |||||||| |||||||||| |||| ||  || ||||||||||||     
T  28127100 gcctccaataccataaagtcctaccatgtggacctcatcatcatatcccttatcgagaagcaaattcacttgttgtacttggtcctgtaatccaacagga 28127199  T
Q  109 tatttggctacgtg---caaaacacgttcggtcttgtccaagatgtctctgactatcttcccaataaactcatattcatatctattcacgtccaataagt 205  Q
    |||||||| || ||    |||||||| | | || ||||  | |||||| ||| |||||||  ||||||||  |||||||||||||| |  |||||||||     
T  28127200 tatttggcaacatgtaagaaaacacgattgatcctgtcggatatgtctttgattatcttctgaataaacttgtattcatatctattaatctccaataaga 28127299  T
Q  206 ttaattagtacacacac 222  Q
    | | ||||| |||||||    
T  28127300 taagttagtgcacacac 28127316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 9 - 113
Target Start/End: Original strand, 28163800 - 28163904
Alignment:
Q  9 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 108  Q
    |||||||||| ||||||||||||||||||| ||| | |||||| || || |||| ||||||||||||||||||| |||| | || | ||||||||||||     
T  28163800 gcctccagtatcataaagtcctaccatgtggacctcatcatcatatcccttatcgagaagcaatttcacttgttgtacttgagattgtaatccaacagga 28163899  T
Q  109 tattt 113  Q
    |||||    
T  28163900 tattt 28163904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 116
Target Start/End: Original strand, 267765 - 267872
Alignment:
Q  9 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 108  Q
    ||||||| | ||||||| ||| ||||| || ||||| ||||||||| |  |||||||||||||||||||||||| |||| | |||  |||||||||||||    
T  267765 gcctccaatcccataaattccaaccatatggaccccatcatcagatccattatcaagaagcaatttcacttgttgtacttgagaccataatccaacaggg 267864  T
Q  109 tatttggc 116  Q
    || |||||    
T  267865 taattggc 267872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 128; Significance: 9e-66; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 512 - 754
Target Start/End: Original strand, 29273736 - 29273981
Alignment:
Q  512 ttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgacccttttccttg---cagttaatgatt 608  Q
    |||||||||| | || || |||||||| |  | ||||||||||| ||||||||| |||||||||| ||  |||||||||  ||||   |||| ||||||     
T  29273736 ttcaccataactcccactttgatgtcgtatgtgagtaggatccacgccatagaagacaggcaaaatgagacgaccctttgtcttgtagcagtgaatgatg 29273835  T
Q  609 tggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggcattgtcgagtgatcttt 708  Q
    ||||||||||| |||||||||||||| |||||||||||||||  ||||||||||||||| ||||||||||||||||||||| ||||||||||||||  ||    
T  29273836 tggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaattctagactcttcaatgacattgtcgagtgatgatt 29273935  T
Q  709 tgatttcatcccctctttgaagttcacgatcatccatgaaggtgtg 754  Q
    |||||||||||||||||||||||||||||||||| |||||||||||    
T  29273936 tgatttcatcccctctttgaagttcacgatcatcaatgaaggtgtg 29273981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 29273273 - 29273370
Alignment:
Q  19 ccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacagggtatttggc 116  Q
    ||||||| ||| ||||| || | ||| ||||||||| |  ||||||||||| |||| ||||||| |||| | |||| |||||||||||||||||||||    
T  29273273 ccataaattccaaccatatggatcccatcatcagatccattatcaagaagcgatttgacttgttgtacttgagactgtaatccaacagggtatttggc 29273370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 128; Significance: 9e-66; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 389 - 754
Target Start/End: Original strand, 18731334 - 18731702
Alignment:
Q  389 gtacccaggactaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaac 488  Q
    ||||||| |||||||||||||||| |||||||||||||||| | ||||||| |  ||||||   ||||||| ||||||||| | | | | |||||| ||     
T  18731334 gtacccatgactaaaatggtagccggacaagttagcagcttcggtcagagccaacttccattgatgcaaccgctccatgtttttcttgttattttggaaa 18731433  T
Q  489 cttttttcatgcttagcca-atgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgaccc 587  Q
    || ||||  |||||||  | ||| |||||||||| | || || |||||||| |  | | ||||||||| ||||||||||||||||||||| |  ||||||    
T  18731434 ctctttttgtgcttagtgagatg-ttcaccataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccc 18731532  T
Q  588 ttttccttg---cagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactctt 684  Q
    |||  ||||   ||||  ||||| ||||||||||| |||||||||||||| |||||||||||||||  |||||||||||||||||| || ||||||||||    
T  18731533 tttgtcttgtagcagtgcatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcctagactctt 18731632  T
Q  685 caatggcattgtcgagtgatcttttgatttcatcccctctttgaagttcacgatcatccatgaaggtgtg 754  Q
    ||||||||||||||||||||  ||||||||||||||||||||| || ||||| ||||| |||||||||||    
T  18731633 caatggcattgtcgagtgatggtttgatttcatcccctctttgcaggtcacggtcatcaatgaaggtgtg 18731702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 389 - 754
Target Start/End: Original strand, 18679397 - 18679765
Alignment:
Q  389 gtacccaggactaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaac 488  Q
    |||||||||||||||||||||||| |||||||||||||||| | ||||||| |  ||||||   ||||||| ||||||||| |   | | |||||| ||     
T  18679397 gtacccaggactaaaatggtagccggacaagttagcagcttcggtcagagctaacttccattgatgcaaccgctccatgtttttattgttattttggaaa 18679496  T
Q  489 cttttttcatgcttagcca-atgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgaccc 587  Q
    || |||   || ||||  | ||| |||||||||| |||| || |||||||  |  | ||||||||||| | ||||||||||||||||||| |  ||||||    
T  18679497 ctctttcagtgattagtgagatg-ttcaccataactaccactttgatgtcatatgtgagtaggatccacgacatagaaaacaggcaaaacaagacgaccc 18679595  T
Q  588 ttttccttg---cagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactctt 684  Q
    |||  ||||   |||| |||||| ||||||||||| |||||||||||||| |||||||||||||||  |||||||||||||||||| || ||||||||||    
T  18679596 tttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcctagactctt 18679695  T
Q  685 caatggcattgtcgagtgatcttttgatttcatcccctctttgaagttcacgatcatccatgaaggtgtg 754  Q
    ||||||||||||||||||||  ||||||||||||||||||||| || ||||| ||||| |||||||||||    
T  18679696 caatggcattgtcgagtgatggtttgatttcatcccctctttgcaggtcacggtcatcaatgaaggtgtg 18679765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 389 - 754
Target Start/End: Original strand, 18699230 - 18699598
Alignment:
Q  389 gtacccaggactaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaac 488  Q
    |||||||| ||||||||||||||| |||||||||||||||| | ||||||| |  ||||||   ||||||| ||||||||| | | | | |||||| ||     
T  18699230 gtacccagaactaaaatggtagccggacaagttagcagcttcggtcagagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaaa 18699329  T
Q  489 cttttttcatgcttagcca-atgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgaccc 587  Q
    || ||| | |||||||  | ||| |||||||||| | || || |||||||| |  | ||||||||| | |||||||||||||||||||||||  |||||     
T  18699330 ctctttccgtgcttagtgagatg-ttcaccataactcccactttgatgtcgtatgtgagtaggatctacgccatagaaaacaggcaaaacgagacgacct 18699428  T
Q  588 ttttccttg---cagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactctt 684  Q
    |||  ||||   |||| |||||| || |||||||| |||||||||||||| |||||||||||||||  |||||||||||||||||| || ||||||||||    
T  18699429 tttgtcttgtagcagtgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcctagactctt 18699528  T
Q  685 caatggcattgtcgagtgatcttttgatttcatcccctctttgaagttcacgatcatccatgaaggtgtg 754  Q
    ||||||||||||||||||||  ||||||||||||||| ||||| || ||||| ||||| |||||||||||    
T  18699529 caatggcattgtcgagtgatggtttgatttcatccccactttgcaggtcacggtcatcaatgaaggtgtg 18699598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 389 - 754
Target Start/End: Original strand, 18723915 - 18724283
Alignment:
Q  389 gtacccaggactaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaac 488  Q
    |||||||||||||||||||||||| |||||||||||||||| | ||||||| |  ||||||   ||||||| ||||||||| | | | | |||||| ||     
T  18723915 gtacccaggactaaaatggtagccggacaagttagcagcttcggtcagagccaacttccattgatgcaaccgctccatgtttttcttgttattttggaaa 18724014  T
Q  489 cttttttcatgcttagcca-atgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgaccc 587  Q
    ||  |||  |||||||  | ||| |||||||||| | || || || ||||| |  | | ||||||||| ||||||||||||||||||||| |  ||||||    
T  18724015 ctcattttgtgcttagtgagatg-ttcaccataactcccactttggtgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccc 18724113  T
Q  588 ttttccttg---cagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactctt 684  Q
    |||  ||||   ||||  ||||| ||||||||||| | |||||||||||| |||||||||||||||  |||||||||||||||||| || ||||||||||    
T  18724114 tttgtcttgtagcagtgcatgatgtggacaagttcgttcaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcctagactctt 18724213  T
Q  685 caatggcattgtcgagtgatcttttgatttcatcccctctttgaagttcacgatcatccatgaaggtgtg 754  Q
    ||||||||||||||||||||  ||||||||||||||||||||| || ||||| ||||| |||||||||||    
T  18724214 caatggcattgtcgagtgatggtttgatttcatcccctctttgcaggtcacggtcatcaatgaaggtgtg 18724283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 389 - 754
Target Start/End: Original strand, 18655307 - 18655675
Alignment:
Q  389 gtacccaggactaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaac 488  Q
    ||||||||||||| |||||||||| |||||||||||||||| | ||||||| |  ||||||   ||||||| ||||||||| | | | | |||||| ||     
T  18655307 gtacccaggactagaatggtagccggacaagttagcagcttcggtcagagccaacttccattgatgcaaccgctccatgtttttcttgttattttggaaa 18655406  T
Q  489 cttttttcatgcttagcca-atgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgaccc 587  Q
     | |||   |||||||  | ||| |||||||||| | ||  | |||||||| |  | ||||||||||| ||||||||||||||| |||||||  ||||||    
T  18655407 ttctttctgtgcttagtgagatg-ttcaccataacttccagtttgatgtcgtatgtgagtaggatccacgccatagaaaacaggaaaaacgagacgaccc 18655505  T
Q  588 ttttccttg---cagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactctt 684  Q
    |||  ||||   |||| ||||||  |||||||||| |||||||||||||| |||||||||||||||  ||||||||||||||| || || ||||||||||    
T  18655506 tttgtcttgtagcagtgaatgatgcggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaagatcctagactctt 18655605  T
Q  685 caatggcattgtcgagtgatcttttgatttcatcccctctttgaagttcacgatcatccatgaaggtgtg 754  Q
     |||||||||||||||||||  ||||||||||||||| ||||| || ||||| ||||| |||||||||||    
T  18655606 gaatggcattgtcgagtgatggtttgatttcatccccactttgcagctcacggtcatcaatgaaggtgtg 18655675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 416 - 688
Target Start/End: Complemental strand, 18074079 - 18073804
Alignment:
Q  416 caagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaaccttttttcatgcttagccaatgcttca 515  Q
    ||||||||||||  |  ||||||| |||||||||  |||||||||||||||||| | | |||||||||||||||| |||||||||| ||||||||||| |    
T  18074079 caagttagcagccagactcagagccactttccattgctgcaacctctccatgtttttcgtatcattttgaaacctattttcatgctcagccaatgcttta 18073980  T
Q  516 ccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgaccct---tttccttgcagttaatgatttgga 612  Q
    |||||  ||||| ||||||||||||||| |||||| ||||  ||| |||||||||||||||||| || |||||   |||  | ||||| |||||| ||||    
T  18073979 ccatacctacctgtatgatgtcgcacatcagtaggttccacaccaaagaaaacaggcaaaacgaggcaacccttggttttgtagcagtgaatgatgtgga 18073880  T
Q  613 caagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaat 688  Q
    |||||   ||||||||| |||| ||||| ||||||||||||||||| |  ||||| ||||| || || ||||||||    
T  18073879 caagtgtgtccaaacaagatgaagaagatgcatagttggcagaaaatatgggaatcaaaatcctggattcttcaat 18073804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 494 - 648
Target Start/End: Original strand, 5090902 - 5091059
Alignment:
Q  494 ttcatgcttagccaatgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgacccttttcc 593  Q
    |||||||| ||| | ||||||||||||| | ||  | |||| |||||||| || ||| ||||  |||||||||| ||||||||| | || ||| ||||||    
T  5090902 ttcatgctcagcaagtgcttcaccataacttccagtctgatatcgcacatgagaaggttccacaccatagaaaataggcaaaaccaggcaaccattttcc 5091001  T
Q  594 tt---gcagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagt 648  Q
    ||   ||||| ||| || |||||||||||||| |||||||| || ||||| |||||||    
T  5091002 ttggagcagtgaataatatggacaagttcatctaaacaaaacgaagaagaagcatagt 5091059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 116
Target Start/End: Original strand, 18698821 - 18698928
Alignment:
Q  9 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 108  Q
    ||||||| | ||||||||||||| |||| | || || ||||||||| |  |||||||||||  ||||||||||| |||||| ||||  ||||||||||||    
T  18698821 gcctccaatgccataaagtcctaacatgcggactccatcatcagatcctttatcaagaagcgctttcacttgttgtactcgagactgcaatccaacaggg 18698920  T
Q  109 tatttggc 116  Q
    || |||||    
T  18698921 taattggc 18698928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 18074518 - 18074417
Alignment:
Q  9 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 108  Q
    ||||||| | ||||||| ||| ||||| || ||||| ||||||| | ||  |||||||||| |||||||||||| |||||| ||||  ||||||||||||    
T  18074518 gcctccaatcccataaattccaaccatatggaccccatcatcaggtccctcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacaggg 18074419  T
Q  109 ta 110  Q
    ||    
T  18074418 ta 18074417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 18654898 - 18654999
Alignment:
Q  9 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 108  Q
    ||||||| ||||||||||||||| |||| | || ||  |||||||| |  ||||||||||| |||||||||||| |||||| ||||  || |||||||||    
T  18654898 gcctccaataccataaagtcctatcatgcggactccaccatcagatcctttatcaagaagcgatttcacttgttgtactcgagactgcaacccaacaggg 18654997  T
Q  109 ta 110  Q
    ||    
T  18654998 ta 18654999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 116
Target Start/End: Original strand, 18678981 - 18679088
Alignment:
Q  9 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 108  Q
    ||||||| | |||||||||||||||||| | || || |||| ||||     |||||||||| |||||||||||| |||||| ||||  ||||||||||||    
T  18678981 gcctccaatgccataaagtcctaccatgcggactccatcataagatcattcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacaggg 18679080  T
Q  109 tatttggc 116  Q
    || |||||    
T  18679081 taattggc 18679088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 18074378 - 18074321
Alignment:
Q  146 agatgtctctgactatcttcccaataaactcatattcatatctattcacgtccaataa 203  Q
    |||||| | |||||||||| ||||||| ||| |||||||||||||||| |||||||||    
T  18074378 agatgtatttgactatctttccaataagctcgtattcatatctattcatgtccaataa 18074321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 18655047 - 18655096
Alignment:
Q  155 tgactatcttcccaataaactcatattcatatctattcacgtccaataag 204  Q
    |||||||||| ||||||||||  |||||||||||||||| ||||||||||    
T  18655047 tgactatctttccaataaacttgtattcatatctattcatgtccaataag 18655096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 18723506 - 18723607
Alignment:
Q  9 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 108  Q
    ||||||| ||||||||||||||| |||| | || ||  ||| |||| |  ||||||||||| |||||||||||| |||||| ||||  || |||||||||    
T  18723506 gcctccaataccataaagtcctatcatgcggactccaccattagatcctttatcaagaagcgatttcacttgttgtactcgagactgcaacccaacaggg 18723605  T
Q  109 ta 110  Q
    ||    
T  18723606 ta 18723607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 18723655 - 18723704
Alignment:
Q  155 tgactatcttcccaataaactcatattcatatctattcacgtccaataag 204  Q
    |||||||||| ||||||||||  |||||||||||||||| ||||||||||    
T  18723655 tgactatctttccaataaacttgtattcatatctattcatgtccaataag 18723704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 18730925 - 18731026
Alignment:
Q  9 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 108  Q
    ||||||| ||||||||||||||| |||| | || ||  ||| |||| |  ||||||||||| |||||||||||| |||||| ||||  || |||||||||    
T  18730925 gcctccaataccataaagtcctatcatgcggactccaccataagatcctttatcaagaagcgatttcacttgttgtactcgagactgcaacccaacaggg 18731024  T
Q  109 ta 110  Q
    ||    
T  18731025 ta 18731026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 596 - 688
Target Start/End: Original strand, 17989093 - 17989185
Alignment:
Q  596 gcagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaat 688  Q
    ||||| |||||| |||||||||   ||||||||| |||| ||||| ||||||||||||||||| |  ||||| ||||| || || ||||||||    
T  17989093 gcagtgaatgatgtggacaagtgtgtccaaacaagatgaagaagatgcatagttggcagaaaatatgggaatcaaaatcctggattcttcaat 17989185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 18679130 - 18679179
Alignment:
Q  155 tgactatcttcccaataaactcatattcatatctattcacgtccaataag 204  Q
    |||||||||  ||||||||||  |||||||||||||||| ||||||||||    
T  18679130 tgactatctctccaataaacttgtattcatatctattcatgtccaataag 18679179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 18731074 - 18731123
Alignment:
Q  155 tgactatcttcccaataaactcatattcatatctattcacgtccaataag 204  Q
    ||||||||||  |||||||||  |||||||||||||||| ||||||||||    
T  18731074 tgactatcttttcaataaacttgtattcatatctattcatgtccaataag 18731123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 116; Significance: 1e-58; HSPs: 2)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 389 - 751
Target Start/End: Complemental strand, 7869 - 7504
Alignment:
Q  389 gtacccaggactaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaac 488  Q
    ||||||| ||||| |||||||||| |||||||||||||||||| ||||||| |  ||||||   ||||| | ||||||||||| | ||||||||||||||    
T  7869 gtacccatgactagaatggtagccggacaagttagcagcttgggtcagagccaacttccattgatgcaatcgctccatgttattcttatcattttgaaac 7770  T
Q  489 cttttttcatgcttagccaatgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgaccct 588  Q
    || ||||||||   |||||||||||||||||||  |||| |||||||||||||||||||||||||||  ||| |||||||||||||||||| |||||| |    
T  7769 ctcttttcatgtccagccaatgcttcaccataacgacctgtatgatgtcgcacattagtaggatccacaccaaagaaaacaggcaaaacgaggcgacctt 7670  T
Q  589 tttcctt---gcagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttc 685  Q
     |  |||   ||| | ||| || || |||||||| ||||| ||||||   |||| ||| ||||||  ||||||||||||||| ||||| ||||| |||||    
T  7669 ctgtcttgtagcaatgaataatgtgaacaagttcgtccaagcaaaattttgaagtggcgtagttgatagaaaacacaggaataaaaatcctagattcttc 7570  T
Q  686 aatggcattgtcgagtgatcttttgatttcatcccctctttgaagttcacgatcatccatgaaggt 751  Q
     ||||| |||  |||||||  | |||||||||| ||||||||||| |||   ||||| ||||||||    
T  7569 gatggccttgaggagtgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggt 7504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #2
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 9 - 116
Target Start/End: Complemental strand, 8244 - 8137
Alignment:
Q  9 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 108  Q
    |||||||||||||||||||||||||||||| || || ||||||||| |   |||||||||| ||||||| |||| |||||| |||| |||||||||||||    
T  8244 gcctccagtaccataaagtcctaccatgtggactccatcatcagatccttcatcaagaagcgatttcacatgttgtactcgagactgtaatccaacaggg 8145  T
Q  109 tatttggc 116  Q
    || |||||    
T  8144 taattggc 8137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 98; Significance: 7e-48; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 416 - 688
Target Start/End: Complemental strand, 59887 - 59612
Alignment:
Q  416 caagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaaccttttttcatgcttagccaatgcttca 515  Q
    ||||||||||||  |  ||||||| |||||||||  |||||||||||||||||| | | |||||||||||||||| |||||||||| ||||||||||| |    
T  59887 caagttagcagccagactcagagccactttccattgctgcaacctctccatgtttttcgtatcattttgaaacctattttcatgctcagccaatgcttta 59788  T
Q  516 ccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgaccct---tttccttgcagttaatgatttgga 612  Q
    |||||  ||||| ||||||||||||||| |||||| ||||  ||| |||||||||||||||||| || |||||   |||  | ||||| |||||| ||||    
T  59787 ccatacctacctgtatgatgtcgcacatcagtaggttccacaccaaagaaaacaggcaaaacgaggcaacccttggttttgtagcagtgaatgatgtgga 59688  T
Q  613 caagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaat 688  Q
    |||||   ||||||||| |||| ||||| ||||||||||||||||| |  ||||| ||||| || || ||||||||    
T  59687 caagtgtgtccaaacaagatgaagaagatgcatagttggcagaaaatatgggaatcaaaatcctggattcttcaat 59612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 60326 - 60225
Alignment:
Q  9 gcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacaggg 108  Q
    ||||||| | ||||||| ||| ||||| || ||||| ||||||| | ||  |||||||||| |||||||||||| |||||| ||||  ||||||||||||    
T  60326 gcctccaatcccataaattccaaccatatggaccccatcatcaggtccctcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacaggg 60227  T
Q  109 ta 110  Q
    ||    
T  60226 ta 60225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 60186 - 60129
Alignment:
Q  146 agatgtctctgactatcttcccaataaactcatattcatatctattcacgtccaataa 203  Q
    |||||| | |||||||||| ||||||| ||| |||||||||||||||| |||||||||    
T  60186 agatgtatttgactatctttccaataagctcgtattcatatctattcatgtccaataa 60129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 58; Significance: 5e-24; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 379 - 691
Target Start/End: Complemental strand, 43320 - 43005
Alignment:
Q  379 gttaagtggggtacccaggactaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatc 478  Q
    ||||||||| ||||| || ||| ||||||| ||| || |||||||| | |||  | ||||||   |||||| ||||||||||||||||||||||| |       
T  43320 gttaagtggtgtacctagaactgaaatggtggccagagaagttagctgtttgagttagagcactcttccatttctgcaacctctccatgttatccgtgct 43221  T
Q  479 attttgaaaccttttttcatgcttagccaatgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacg 578  Q
    |||||| ||| | |    ||||| ||||| ||||| ||||||| | ||  | ||||||| ||| |||| ||| ||||   |||||||||  ||||||||     
T  43220 attttggaacttctcaatatgctcagccagtgctttaccataactgccaatctgatgtctcacgttagaaggttccacatcatagaaaattggcaaaact 43121  T
Q  579 acgcgacccttttccttgcag---ttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattc 675  Q
    | ||| || |||| |||||||   | |||||| ||||||||||| ||||| |||||||| ||||| ||||| |||  ||| || |||||||||||||| |    
T  43120 aggcgtccatttttcttgcagcagtgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacaggaatgaaaatcc 43021  T
Q  676 tagactcttcaatggc 691  Q
    ||||||||||||||||    
T  43020 tagactcttcaatggc 43005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 444 - 754
Target Start/End: Complemental strand, 35014 - 34701
Alignment:
Q  444 ttccatctctgcaacctctccatgttatccatatcattttgaaaccttttttcatgcttagccaatgcttcaccataaatacctctatgatgtcgcacat 543  Q
    |||||| ||||||||||||||||||||||| | | |||||| ||| | |||  ||| | | ||| ||||| ||||||| | ||  | ||||||||||| |    
T  35014 ttccatttctgcaacctctccatgttatccttgttattttggaacttctttatatgatcatccagtgctttaccataactgcccttgtgatgtcgcacgt 34915  T
Q  544 tagtaggatccatgccatagaaaacaggcaaaacgacgcgacccttttccttg---cagttaatgatttggacaagttcatccaaacaaaatgacgaaga 640  Q
     || ||| ||||   |||||||||  |||||||| |  || ||  ||||||||   |||| |||||| ||||||||||| ||||| |||||||| |||||    
T  34914 gagaaggttccacatcatagaaaattggcaaaactagacgcccgctttccttgaagcagtgaatgatgtggacaagttcgtccaagcaaaatgaagaaga 34815  T
Q  641 ggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggcattgtcgagtgatcttttgatttcatcccctctttgaagttcacgatca 740  Q
     ||||| |||  ||| || |||||||||||||| ||||||||||||||||| |||   ||||||  | | |||||||| |||| |||||| || |  |||    
T  34814 agcataattgatagacaagacaggaatgaaaatcctagactcttcaatggccttgaaaagtgatggtgttatttcatctcctccttgaagctccctgtca 34715  T
Q  741 tccatgaaggtgtg 754  Q
    || |||||||||||    
T  34714 tcaatgaaggtgtg 34701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 417 - 758
Target Start/End: Complemental strand, 27764 - 27420
Alignment:
Q  417 aagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaaccttttttcatgcttagccaatgcttcac 516  Q
    |||||||||| |||  | |||||||  |||||| |||||||||| |||||| ||| | | | |||||| ||||| | |  ||| | | ||| ||||| ||    
T  27764 aagttagcagtttgagtaagagcaatcttccatttctgcaacctatccatgctatgcttgttattttggaacctctctatatgatcatccagtgctttac 27665  T
Q  517 cataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgacccttttccttgcag---ttaatgatttggac 613  Q
    ||||| | ||  | ||||||||||||| || ||| ||||   |||||||||  |||||||| | ||| |  ||||||||| ||   | |||||| |||||    
T  27664 cataactgcccttgtgatgtcgcacatgagaaggttccacatcatagaaaattggcaaaacaaggcgccgattttccttgaagcaatgaatgatgtggac 27565  T
Q  614 aagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggcattgtcgagtgatcttttgatt 713  Q
    |||||| ||||| |||||||| ||||| ||||| |||  ||| || |||||||||||||| ||||| ||||||||| | |||   ||||||  | | |||    
T  27564 aagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacaggaatgaaaatcctagattcttcaatgaccttgaaaagtgatgatgttatt 27465  T
Q  714 tcatcccctctttgaagttcacgatcatccatgaaggtgtgaatt 758  Q
    ||||| |||| |||||| || | |||||| | ||| |||||||||    
T  27464 tcatcacctccttgaagctctctatcatcaaagaatgtgtgaatt 27420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 379 - 691
Target Start/End: Complemental strand, 117146 - 116835
Alignment:
Q  379 gttaagtggggtacccaggactaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatc 478  Q
    ||||||| || ||||||||||| ||||||| |||||| |||||||||| |||  | ||||| |  |||||| ||||||||||||||||| ||||| |       
T  117146 gttaagtaggttacccaggactgaaatggtggcctgagaagttagcagtttgagtaagagccatcttccatttctgcaacctctccatgctatccgtgct 117047  T
Q  479 attttgaaaccttttttcatgcttagccaatgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacg 578  Q
    |||    ||||| |    |||||  |||| ||||| ||||||| | ||  | ||||||||||| | || ||| ||||   | |||||||| ||| ||||     
T  117046 att----aacctctcaatatgctcggccagtgctttaccataactgcccttgtgatgtcgcacgtgagaaggttccacatcgtagaaaactggctaaact 116951  T
Q  579 acgcgacccttttccttg---cagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattc 675  Q
    | ||| || ||||| |||   |||| ||| || ||||||||||||||||| ||||| || ||||| ||||| |||  ||| || | |||||||||||| |    
T  116950 aggcgcccattttctttgaagcagtgaataatgtggacaagttcatccaagcaaaaggaagaagaagcataattgatagacaaaataggaatgaaaatcc 116851  T
Q  676 tagactcttcaatggc 691  Q
    ||||||||||||||||    
T  116850 tagactcttcaatggc 116835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 596 - 691
Target Start/End: Original strand, 58335 - 58430
Alignment:
Q  596 gcagttaatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggc 691  Q
    ||||| |||||| ||||||||||| | ||| |||||||| ||||| |||||||||  ||| || || ||||||||||| |||||||||| ||||||    
T  58335 gcagtgaatgatgtggacaagttcgttcaagcaaaatgaagaagaagcatagttgatagacaagacgggaatgaaaatcctagactctttaatggc 58430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 636 - 751
Target Start/End: Original strand, 10 - 125
Alignment:
Q  636 gaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggcattgtcgagtgatcttttgatttcatcccctctttgaagttcac 735  Q
    |||| ||| ||||||  ||||||||||||||| ||||| ||||| ||||| ||||| |||  |||||||  | |||||||||| ||||||||||| |||     
T  10 gaagtggcgtagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgaggagtgatggtgtgatttcatctcctctttgaagatcat 109  T
Q  736 gatcatccatgaaggt 751  Q
      ||||| ||||||||    
T  110 tgtcatcaatgaaggt 125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000003; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 602 - 752
Target Start/End: Complemental strand, 3279816 - 3279666
Alignment:
Q  602 aatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggcattgtcgagt 701  Q
    |||||| ||||||||||| ||||||||||||   ||||| |||||||||  ||| || || ||||| |||||  | |||||||| ||||| ||| | |||    
T  3279816 aatgatgtggacaagttcgtccaaacaaaatatagaagaagcatagttgatagagaagaccggaataaaaatcatggactcttcgatggccttgacaagt 3279717  T
Q  702 gatcttttgatttcatcccctctttgaagttcacgatcatccatgaaggtg 752  Q
    |||  | |||||||||| ||||  ||||| || | |||||| |||||||||    
T  3279716 gattgtgtgatttcatcacctccatgaagctccctatcatcaatgaaggtg 3279666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 387 - 469
Target Start/End: Complemental strand, 3280049 - 3279967
Alignment:
Q  387 gggtacccaggactaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgtt 469  Q
    ||||||| |||| ||||||||| ||| ||||||||||| |||||||| ||||| |  |||||| | |||||||||| ||||||    
T  3280049 gggtacctaggattaaaatggtggccggacaagttagctgcttggttaagagccatcttccatttatgcaacctcttcatgtt 3279967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 402 - 571
Target Start/End: Original strand, 17993540 - 17993709
Alignment:
Q  402 aaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaaccttttttcatgct 501  Q
    ||||||| ||| || ||||||||||||||||| |||||    |||||| ||  ||||| ||||||||| ||| |   ||||||||| |  | ||||||||    
T  17993540 aaatggtggccagataagttagcagcttggttaagagctttcttccatttcaacaaccgctccatgttttccttgctattttgaaaaccctcttcatgct 17993639  T
Q  502 tagccaatgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacagg 571  Q
    |||| | ||||||||||||| || |  | ||||||||||| | || ||| ||  ||||||||||||||||    
T  17993640 tagcaagtgcttcaccataactatcattctgatgtcgcacctgagaaggttctgtgccatagaaaacagg 17993709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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