View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: F9630H-LTR4-TNT-insertion-13 (Length: 788)

Name: F9630H-LTR4-TNT-insertion-13
Description: F9630H-LTR4
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] F9630H-LTR4-TNT-insertion-13
F9630H-LTR4-TNT-insertion-13
[»] chr8 (66 HSPs)
chr8 (7-780)||(8714308-8715081)
chr8 (600-758)||(30576636-30576794)
chr8 (602-780)||(9276940-9277116)
chr8 (602-763)||(25730094-25730256)
chr8 (600-780)||(39701348-39701527)
chr8 (598-780)||(23553351-23553532)
chr8 (606-748)||(36359905-36360047)
chr8 (602-763)||(25737580-25737742)
chr8 (601-758)||(8713845-8714002)
chr8 (601-780)||(25737103-25737281)
chr8 (601-751)||(9770769-9770919)
chr8 (609-758)||(30576159-30576308)
chr8 (606-751)||(44041271-44041416)
chr8 (609-751)||(29794241-29794383)
chr8 (668-758)||(35433903-35433993)
chr8 (606-764)||(39700889-39701047)
chr8 (601-751)||(45017746-45017896)
chr8 (602-750)||(16208674-16208822)
chr8 (601-751)||(16197028-16197178)
chr8 (668-764)||(5358649-5358745)
chr8 (651-761)||(9276532-9276642)
chr8 (600-758)||(31169461-31169618)
chr8 (608-765)||(23553837-23553994)
chr8 (606-677)||(4613804-4613875)
chr8 (601-751)||(4613739-4613889)
chr8 (606-676)||(29794256-29794326)
chr8 (699-756)||(44040859-44040916)
chr8 (606-758)||(40553224-40553367)
chr8 (609-676)||(13771425-13771492)
chr8 (601-736)||(43422857-43422992)
chr8 (601-736)||(43423091-43423225)
chr8 (669-759)||(13771842-13771932)
chr8 (668-757)||(34686875-34686964)
chr8 (609-717)||(36360092-36360200)
chr8 (605-676)||(5358646-5358717)
chr8 (608-697)||(43423070-43423159)
chr8 (601-709)||(9770560-9770668)
chr8 (601-748)||(14871342-14871481)
chr8 (606-694)||(29792558-29792646)
chr8 (629-780)||(6235760-6235907)
chr8 (601-676)||(35433896-35433971)
chr8 (668-751)||(35434313-35434396)
chr8 (601-736)||(40553297-40553432)
chr8 (606-652)||(11113615-11113661)
chr8 (669-751)||(13771425-13771507)
chr8 (609-663)||(13771878-13771932)
chr8 (623-697)||(43422939-43423013)
chr8 (604-709)||(11113553-11113658)
chr8 (606-662)||(30576216-30576272)
chr8 (700-752)||(34686509-34686561)
chr8 (669-733)||(36360136-36360200)
chr8 (274-369)||(39434562-39434658)
chr8 (609-765)||(40552769-40552925)
chr8 (291-385)||(3187882-3187977)
chr8 (606-709)||(6236254-6236357)
chr8 (606-661)||(9770676-9770731)
chr8 (601-651)||(23179046-23179096)
chr8 (601-663)||(35434341-35434403)
chr8 (274-385)||(38815189-38815302)
chr8 (608-721)||(41190284-41190397)
chr8 (606-679)||(45017974-45018047)
chr8 (609-661)||(36360088-36360140)
chr8 (606-676)||(34686896-34686966)
chr8 (652-709)||(9770662-9770719)
chr8 (305-366)||(10556412-10556473)
chr8 (667-736)||(41190329-41190398)
[»] chr7 (84 HSPs)
chr7 (600-780)||(5559106-5559287)
chr7 (601-758)||(35214806-35214964)
chr7 (601-758)||(28256493-28256650)
chr7 (606-749)||(5805043-5805186)
chr7 (604-722)||(21412929-21413047)
chr7 (601-742)||(20366521-20366662)
chr7 (600-780)||(27995060-27995239)
chr7 (600-756)||(39959163-39959319)
chr7 (601-764)||(1441403-1441557)
chr7 (608-751)||(19925312-19925455)
chr7 (606-742)||(1286375-1286511)
chr7 (608-750)||(6220351-6220492)
chr7 (601-709)||(31893492-31893600)
chr7 (608-758)||(1349116-1349269)
chr7 (601-736)||(33879505-33879640)
chr7 (606-736)||(21412871-21413001)
chr7 (600-758)||(35215291-35215449)
chr7 (609-750)||(33235042-33235183)
chr7 (600-780)||(8040102-8040271)
chr7 (652-756)||(10619851-10619955)
chr7 (652-780)||(23679477-23679603)
chr7 (601-736)||(21433144-21433279)
chr7 (668-762)||(28104304-28104398)
chr7 (598-751)||(23150636-23150789)
chr7 (601-754)||(34951228-34951380)
chr7 (601-765)||(5559588-5559741)
chr7 (600-763)||(1286767-1286927)
chr7 (601-749)||(1346480-1346624)
chr7 (601-760)||(20101823-20101980)
chr7 (606-697)||(33879484-33879575)
chr7 (606-676)||(31175946-31176016)
chr7 (609-758)||(20183778-20183926)
chr7 (601-758)||(20366049-20366204)
chr7 (606-679)||(21433209-21433282)
chr7 (609-709)||(21433290-21433391)
chr7 (604-664)||(19925339-19925399)
chr7 (630-762)||(31175920-31176052)
chr7 (274-365)||(32584495-32584587)
chr7 (598-758)||(33235519-33235679)
chr7 (652-751)||(4187664-4187763)
chr7 (666-736)||(31893255-31893325)
chr7 (608-758)||(42990507-42990657)
chr7 (601-738)||(5805581-5805717)
chr7 (609-736)||(19925113-19925239)
chr7 (690-757)||(27995548-27995615)
chr7 (608-751)||(31893257-31893391)
chr7 (702-764)||(8039747-8039809)
chr7 (601-751)||(21413084-21413233)
chr7 (609-679)||(34951508-34951578)
chr7 (611-733)||(29591047-29591171)
chr7 (606-687)||(40904756-40904837)
chr7 (601-661)||(1441006-1441066)
chr7 (608-676)||(10619867-10619935)
chr7 (604-708)||(19925168-19925271)
chr7 (601-709)||(41020140-41020247)
chr7 (668-758)||(1441013-1441114)
chr7 (604-709)||(34951418-34951523)
chr7 (600-736)||(36566277-36566413)
chr7 (291-363)||(45003019-45003092)
chr7 (668-736)||(8039670-8039738)
chr7 (601-709)||(22876870-22876977)
chr7 (608-676)||(23679520-23679587)
chr7 (698-758)||(29590709-29590769)
chr7 (601-733)||(40904691-40904823)
chr7 (715-751)||(42990992-42991028)
chr7 (606-685)||(8039668-8039747)
chr7 (630-676)||(27995569-27995615)
chr7 (671-736)||(29591106-29591171)
chr7 (609-717)||(36566346-36566454)
chr7 (604-664)||(4187691-4187751)
chr7 (668-736)||(28256986-28257054)
chr7 (598-697)||(5075345-5075443)
chr7 (606-661)||(33235099-33235154)
chr7 (712-751)||(36566496-36566535)
chr7 (601-652)||(36566526-36566577)
chr7 (712-751)||(39958789-39958828)
chr7 (293-425)||(27521385-27521519)
chr7 (606-652)||(31893489-31893535)
chr7 (667-736)||(1349201-1349270)
chr7 (608-661)||(4187573-4187626)
chr7 (607-652)||(10620239-10620284)
chr7 (291-367)||(21326956-21327033)
chr7 (183-224)||(33677538-33677579)
chr7 (293-369)||(40726596-40726673)
[»] chr4 (57 HSPs)
chr4 (604-754)||(26329918-26330068)
chr4 (605-764)||(5387130-5387289)
chr4 (609-780)||(31229262-31229433)
chr4 (606-736)||(26329996-26330126)
chr4 (668-780)||(52567750-52567861)
chr4 (609-709)||(2788931-2789031)
chr4 (601-736)||(43098401-43098536)
chr4 (601-764)||(52181715-52181878)
chr4 (609-751)||(8408834-8408976)
chr4 (609-758)||(52568163-52568311)
chr4 (600-756)||(8408350-8408497)
chr4 (601-662)||(2508262-2508323)
chr4 (606-709)||(43098368-43098471)
chr4 (600-758)||(19631762-19631915)
chr4 (668-758)||(19632213-19632302)
chr4 (601-751)||(43098182-43098328)
chr4 (700-765)||(44915937-44916002)
chr4 (605-697)||(2788794-2788886)
chr4 (606-686)||(41735817-41735897)
chr4 (609-736)||(22025291-22025417)
chr4 (608-693)||(22025274-22025358)
chr4 (608-736)||(2788964-2789092)
chr4 (606-661)||(26329828-26329883)
chr4 (610-717)||(35046437-35046544)
chr4 (608-733)||(9320017-9320142)
chr4 (608-664)||(8408861-8408917)
chr4 (609-676)||(22025121-22025188)
chr4 (608-686)||(23085246-23085323)
chr4 (669-743)||(42116050-42116124)
chr4 (600-758)||(52183400-52183549)
chr4 (608-697)||(2909182-2909271)
chr4 (669-750)||(35023955-35024036)
chr4 (651-751)||(22025103-22025203)
chr4 (606-750)||(52865961-52866096)
chr4 (666-717)||(9320015-9320066)
chr4 (668-751)||(36890621-36890704)
chr4 (292-385)||(50001025-50001120)
chr4 (598-653)||(52866366-52866421)
chr4 (604-658)||(35046491-35046545)
chr4 (712-758)||(44916287-44916333)
chr4 (187-232)||(14949665-14949710)
chr4 (609-662)||(35046550-35046603)
chr4 (683-756)||(42115654-42115727)
chr4 (274-385)||(53619481-53619594)
chr4 (700-756)||(2508664-2508720)
chr4 (668-736)||(2788797-2788865)
chr4 (600-664)||(52567742-52567806)
chr4 (668-758)||(2508269-2508357)
chr4 (601-644)||(41735958-41736001)
chr4 (609-664)||(42116069-42116124)
chr4 (719-765)||(19681307-19681353)
chr4 (711-765)||(30542730-30542784)
chr4 (606-644)||(41735877-41735915)
chr4 (606-652)||(44916324-44916370)
chr4 (667-736)||(2909181-2909250)
chr4 (671-736)||(19681203-19681268)
chr4 (669-722)||(35046550-35046603)
[»] chr5 (48 HSPs)
chr5 (601-736)||(18951303-18951438)
chr5 (609-758)||(20728536-20728685)
chr5 (600-758)||(36418367-36418525)
chr5 (601-764)||(18248958-18249121)
chr5 (598-749)||(1722497-1722648)
chr5 (601-758)||(19278705-19278861)
chr5 (668-758)||(32459434-32459524)
chr5 (606-717)||(6336148-6336259)
chr5 (601-764)||(36417886-36418040)
chr5 (609-780)||(13543548-13543718)
chr5 (608-759)||(26275511-26275653)
chr5 (606-751)||(5734955-5735099)
chr5 (604-687)||(18951366-18951449)
chr5 (600-751)||(20729018-20729160)
chr5 (609-736)||(32660207-32660334)
chr5 (608-717)||(32660266-32660375)
chr5 (601-751)||(13543084-13543237)
chr5 (690-764)||(1722936-1723010)
chr5 (601-663)||(35891263-35891325)
chr5 (609-758)||(30737748-30737897)
chr5 (609-661)||(6336211-6336263)
chr5 (689-757)||(18238306-18238374)
chr5 (640-751)||(6336301-6336412)
chr5 (606-758)||(30738224-30738377)
chr5 (609-780)||(35189922-35190082)
chr5 (600-758)||(35190389-35190537)
chr5 (598-780)||(5734460-5734640)
chr5 (668-758)||(18237919-18238009)
chr5 (668-758)||(32459822-32459912)
chr5 (601-765)||(13538469-13538628)
chr5 (601-697)||(14235568-14235664)
chr5 (668-764)||(35891222-35891318)
chr5 (601-652)||(26276012-26276063)
chr5 (668-736)||(6336150-6336218)
chr5 (609-661)||(32660327-32660379)
chr5 (601-664)||(18238339-18238402)
chr5 (715-758)||(38082661-38082704)
chr5 (186-244)||(28094136-28094194)
chr5 (604-673)||(13543594-13543663)
chr5 (606-663)||(20728593-20728650)
chr5 (291-367)||(23023507-23023584)
chr5 (274-362)||(35310343-35310432)
chr5 (600-652)||(31813955-31814007)
chr5 (601-664)||(32459427-32459490)
chr5 (712-751)||(38405521-38405560)
chr5 (601-660)||(38405600-38405659)
chr5 (291-367)||(2566213-2566290)
chr5 (668-717)||(19279239-19279288)
[»] chr6 (38 HSPs)
chr6 (606-748)||(20575417-20575559)
chr6 (600-757)||(11528013-11528170)
chr6 (600-780)||(10862533-10862713)
chr6 (601-736)||(16168680-16168815)
chr6 (601-751)||(32417687-32417837)
chr6 (601-751)||(32423528-32423678)
chr6 (601-754)||(24139479-24139631)
chr6 (601-764)||(11527536-11527690)
chr6 (601-764)||(17180100-17180263)
chr6 (601-736)||(32417469-32417604)
chr6 (601-736)||(32423310-32423445)
chr6 (601-758)||(2839625-2839773)
chr6 (600-756)||(2840030-2840177)
chr6 (601-751)||(16168465-16168606)
chr6 (668-750)||(9901966-9902048)
chr6 (603-780)||(10962740-10962916)
chr6 (698-758)||(17131618-17131678)
chr6 (606-662)||(20575600-20575656)
chr6 (609-721)||(32417537-32417649)
chr6 (609-721)||(32423378-32423490)
chr6 (606-709)||(16168647-16168750)
chr6 (668-761)||(10407706-10407800)
chr6 (610-676)||(17179693-17179759)
chr6 (608-709)||(9902281-9902382)
chr6 (667-736)||(20575696-20575764)
chr6 (608-780)||(17179631-17179802)
chr6 (669-736)||(10963162-10963229)
chr6 (666-736)||(9902314-9902384)
chr6 (700-758)||(10407348-10407406)
chr6 (652-722)||(20575600-20575670)
chr6 (601-664)||(9901959-9902022)
chr6 (606-653)||(32417594-32417641)
chr6 (606-653)||(32423435-32423482)
chr6 (284-369)||(3137363-3137449)
chr6 (291-367)||(959493-959570)
chr6 (723-764)||(9946675-9946716)
chr6 (608-697)||(20575675-20575763)
chr6 (291-367)||(32115630-32115707)
[»] scaffold0746 (2 HSPs)
scaffold0746 (606-763)||(497-654)
scaffold0746 (601-757)||(21-176)
[»] chr2 (40 HSPs)
chr2 (601-751)||(34336034-34336184)
chr2 (601-751)||(31264133-31264285)
chr2 (601-750)||(27893536-27893685)
chr2 (601-764)||(36196465-36196626)
chr2 (609-726)||(31263932-31264049)
chr2 (598-765)||(11871711-11871878)
chr2 (600-780)||(27893033-27893203)
chr2 (606-717)||(30907138-30907249)
chr2 (606-709)||(31263989-31264092)
chr2 (608-734)||(30907080-30907206)
chr2 (637-757)||(19080664-19080784)
chr2 (605-723)||(30907316-30907435)
chr2 (606-757)||(39301801-39301943)
chr2 (601-751)||(41265228-41265369)
chr2 (690-758)||(42117174-42117242)
chr2 (601-724)||(8260384-8260507)
chr2 (667-736)||(30907079-30907148)
chr2 (668-764)||(15506466-15506562)
chr2 (662-780)||(20535502-20535620)
chr2 (601-676)||(42117196-42117271)
chr2 (669-751)||(5117053-5117134)
chr2 (608-697)||(32341459-32341549)
chr2 (601-646)||(13315807-13315852)
chr2 (668-756)||(15506052-15506140)
chr2 (606-714)||(34429685-34429793)
chr2 (616-664)||(39376408-39376456)
chr2 (609-676)||(19080696-19080763)
chr2 (669-736)||(19081057-19081124)
chr2 (606-653)||(21813210-21813257)
chr2 (601-736)||(34336263-34336398)
chr2 (609-717)||(16781057-16781166)
chr2 (604-661)||(30907196-30907253)
chr2 (601-652)||(16780938-16780989)
chr2 (668-751)||(21813212-21813286)
chr2 (606-709)||(34336230-34336333)
chr2 (609-652)||(37543014-37543057)
chr2 (608-679)||(37543126-37543197)
chr2 (606-660)||(16781054-16781108)
chr2 (666-736)||(37543129-37543199)
chr2 (291-367)||(13413263-13413340)
[»] scaffold0070 (2 HSPs)
scaffold0070 (606-763)||(28549-28706)
scaffold0070 (712-757)||(29027-29072)
[»] chr3 (33 HSPs)
chr3 (601-758)||(31247611-31247768)
chr3 (601-764)||(4276135-4276298)
chr3 (666-764)||(21376631-21376729)
chr3 (667-757)||(19153883-19153974)
chr3 (600-780)||(35555525-35555705)
chr3 (606-693)||(3087087-3087173)
chr3 (652-757)||(31247178-31247282)
chr3 (608-717)||(54456803-54456912)
chr3 (601-733)||(54456847-54456979)
chr3 (700-761)||(21410270-21410332)
chr3 (668-751)||(24707474-24707557)
chr3 (601-751)||(50530246-50530386)
chr3 (606-661)||(54456799-54456854)
chr3 (601-663)||(54456671-54456733)
chr3 (608-663)||(21376633-21376688)
chr3 (600-679)||(21377045-21377124)
chr3 (668-751)||(54456678-54456761)
chr3 (604-677)||(5505728-5505802)
chr3 (606-676)||(24707472-24707542)
chr3 (715-752)||(35545218-35545255)
chr3 (604-652)||(4276629-4276677)
chr3 (600-652)||(14629284-14629336)
chr3 (712-780)||(21376965-21377032)
chr3 (601-756)||(3088071-3088217)
chr3 (652-751)||(4276599-4276689)
chr3 (606-652)||(14964738-14964784)
chr3 (274-363)||(26772653-26772743)
chr3 (605-663)||(31247191-31247248)
chr3 (274-394)||(44198662-44198784)
chr3 (291-367)||(13582422-13582499)
chr3 (183-232)||(35696472-35696521)
chr3 (274-385)||(38978898-38979011)
chr3 (199-244)||(40520423-40520468)
[»] chr1 (36 HSPs)
chr1 (601-780)||(48352688-48352866)
chr1 (597-758)||(34254495-34254656)
chr1 (600-780)||(27351050-27351229)
chr1 (601-758)||(10686681-10686838)
chr1 (601-751)||(44963839-44963989)
chr1 (601-756)||(29419014-29419173)
chr1 (635-758)||(8902795-8902918)
chr1 (601-736)||(44964063-44964197)
chr1 (630-765)||(49650970-49651096)
chr1 (604-697)||(44964042-44964135)
chr1 (606-717)||(17898796-17898907)
chr1 (601-736)||(17898837-17898972)
chr1 (601-758)||(10685848-10685996)
chr1 (666-757)||(39302336-39302427)
chr1 (609-695)||(11897850-11897936)
chr1 (700-764)||(2965530-2965594)
chr1 (605-764)||(49650577-49650728)
chr1 (700-751)||(1765792-1765843)
chr1 (606-652)||(4772650-4772696)
chr1 (611-676)||(1765763-1765828)
chr1 (285-365)||(2898608-2898689)
chr1 (669-758)||(8903246-8903335)
chr1 (609-709)||(1765884-1765984)
chr1 (274-369)||(2764374-2764470)
chr1 (609-676)||(8902829-8902896)
chr1 (669-736)||(11897850-11897917)
chr1 (293-369)||(34644480-34644557)
chr1 (600-677)||(39302736-39302813)
chr1 (609-652)||(1765881-1765924)
chr1 (609-736)||(1765917-1766044)
chr1 (606-661)||(44964018-44964073)
chr1 (610-664)||(34255000-34255053)
chr1 (274-425)||(31737382-31737534)
chr1 (286-331)||(35550230-35550275)
chr1 (647-704)||(35701487-35701544)
chr1 (711-764)||(48352310-48352363)
[»] scaffold0019 (4 HSPs)
scaffold0019 (601-736)||(124346-124481)
scaffold0019 (601-717)||(124143-124258)
scaffold0019 (606-694)||(124328-124416)
scaffold0019 (608-661)||(124210-124262)
[»] scaffold0027 (3 HSPs)
scaffold0027 (606-765)||(9399-9549)
scaffold0027 (606-697)||(9901-9992)
scaffold0027 (668-736)||(9922-9990)
[»] scaffold0374 (4 HSPs)
scaffold0374 (668-764)||(16180-16276)
scaffold0374 (667-756)||(16576-16665)
scaffold0374 (601-664)||(16173-16236)
scaffold0374 (608-663)||(16609-16664)
[»] scaffold0041 (2 HSPs)
scaffold0041 (606-687)||(45181-45262)
scaffold0041 (601-733)||(45195-45327)


Alignment Details
Target: chr8 (Bit Score: 627; Significance: 0; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 627; E-Value: 0
Query Start/End: Original strand, 7 - 780
Target Start/End: Complemental strand, 8715081 - 8714308
Alignment:
Q  7 agctagaaccaaaacaaaaagccaagccgtgggaaataatatactccacaaagggagtcttttcaaaccgtnnnnnnnnnnnnnnnnnnnnnnnnnttct 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                         ||||    
T  8715081 agctagaaccaaaacaaaaagccaagccgtgggaaataatatactccacaaagggagtcttttcaaaccgtaaaaaagaaactaaaaatgccaaaattct 8714982  T
Q  107 tcctctttttctcaagagtccatatatgtcatcaaaccnnnnnnnnnnnnnnnnnnnnnnnnattgatatttatagaaccaagtaattgagttcaagtgg 206  Q
    ||||||||||||||||||||||||||||||||||||||                        ||||||||||||||||||||||||||||||||||||||    
T  8714981 tcctctttttctcaagagtccatatatgtcatcaaacctcttctttctttctttcttttttcattgatatttatagaaccaagtaattgagttcaagtgg 8714882  T
Q  207 ttaataagctctaccaaaagacgaattgtgtatgagaagattcatgtatgaaataattttttgtcagcaagctgcgttgctaaccctttttagatggtaa 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8714881 ttaataagctctaccaaaagacgaattgtgtatgagaagattcatgtatgaaataattttttgtcagcaagctgcgttgctaaccctttttagatggtaa 8714782  T
Q  307 aatcaattttcttaaacacaacattcatgatctatgagccataacattgatatgcatgaccctctaactatatgtagaatatcaacagtttctaatgcca 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8714781 aatcaattttcttaaacacaacattcatgatctatgagccataacattgatatgcatgaccctctaactatatgtagaatatcaacagtttctaatgcca 8714682  T
Q  407 agaaaccaaaagtgtcaaactcaaatgacgagaaaacatgttaactatccgatcatgttttcacatgattggctggctactttgtttgacgcggctttga 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8714681 agaaaccaaaagtgtcaaactcaaatgacgagaaaacatgttaactatccgatcatgttttcacatgattggctggctactttgtttgacgcggctttga 8714582  T
Q  507 gagcttactattccacggtaaaagttgtgatccccaacttcacaagctggaaaaccccactcacttgtatattgaattaaatccacggtaaatgtttgat 606  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8714581 gagcttactattccacggtaaaagttgtgatccccaacttcacaagctggaaaaccccactcacttgtatattgaattaaatccacggtaaatgtttgat 8714482  T
Q  607 ccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagt 706  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8714481 ccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagt 8714382  T
Q  707 ttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgctagtcagtaaataatta 780  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8714381 ttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgctagtcagtaaataatta 8714308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 600 - 758
Target Start/End: Complemental strand, 30576794 - 30576636
Alignment:
Q  600 gtttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttt 699  Q
    |||||||||||||||||||| ||||||| |||||||||| | |||| |||||||||||||| ||| | |||||||||||| ||||||| |||||||||      
T  30576794 gtttgatccttttagtttgacagaattttcaagttagtcttctaagtttcaaaagtttcaattaggtccttttagtttgacagaattcccaagttagtcc 30576695  T
Q  700 tttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
    |||||||||| ||||||||||||| ||| ||||||||||||||||||||||| ||||||    
T  30576694 tttaagtttcaaaagttttaaatatgtcattttagttgataaactatttcaccgttacc 30576636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 602 - 780
Target Start/End: Complemental strand, 9277116 - 9276940
Alignment:
Q  602 ttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttt 701  Q
    |||||| ||||||||||| |||||| ||||||||||| |||||| ||| |||||||||| ||||| |||||||||||||||||||  |||||||||  ||    
T  9277116 ttgatcattttagtttgacagaattcccaagttagtcttttaagtttcgaaagtttcaattagatccttttagtttgatagaatttccaagttagtcctt 9277017  T
Q  702 taagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgctagtcagtaaataatta 780  Q
    |||||||| ||||||| ||||||||| ||||||||||||||||||||||| ||||||  |||| |||||| ||||||||    
T  9277016 taagtttcaaaagtttcaaataggtc-ttttagttgataaactatttcaccgttacccttgct-gtcagttaataatta 9276940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 602 - 763
Target Start/End: Complemental strand, 25730256 - 25730094
Alignment:
Q  602 ttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaat-agattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||| || |  ||||| ||||| ||||||| |||||||||  |    
T  25730256 ttgatccttttagtttgatagaatttccaagttagtcctttaagttttgaaagtttcaaattaggtcattttaatttgacagaattctcaagttagtcct 25730157  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgc 763  Q
    |||| |||| ||||||| ||||| ||| |||||||||||||||||||||||||||||| ||||    
T  25730156 ttaaatttcaaaagtttcaaatatgtcattttagttgataaactatttcactgttacccctgc 25730094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 600 - 780
Target Start/End: Complemental strand, 39701527 - 39701348
Alignment:
Q  600 gtttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttt 699  Q
    ||||| |||||||||||||| ||||||  ||||||||| ||||||| |||||||||||||| ||  | |||||||||||||||||||| ||  |||||      
T  39701527 gtttggtccttttagtttgacagaattctcaagttagttctttaagtttcaaaagtttcaattaagtccttttagtttgatagaattcccagattagtca 39701428  T
Q  700 tttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgctagtcagtaaataatta 780  Q
    |||||||||| ||| ||| ||||||||| ||||||||||||||||| |||||||||||| |||||| ||||| ||||||||    
T  39701427 tttaagtttcaaaactttcaaataggtccttttagttgataaactacttcactgttacccctgcta-tcagttaataatta 39701348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 598 - 780
Target Start/End: Original strand, 23553351 - 23553532
Alignment:
Q  598 atgtttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagt 697  Q
    |||||||||||||||||||||| ||||||  ||| ||  ||||||||| ||| |||||||||| ||| | |||||||||||| | ||||| |||||| ||    
T  23553351 atgtttgatccttttagtttgacagaattctcaacttgatcctttaagtttcgaaagtttcaattaggtccttttagtttgacaaaattctcaagttggt 23553450  T
Q  698 tttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgctagtcagtaaataatta 780  Q
     |||||| |||| ||||||| ||||||||| ||||||||||||||||||||||| |||||| ||||| |||||| ||||||||    
T  23553451 cttttaaatttcaaaagtttcaaataggtcattttagttgataaactatttcaccgttacccctgct-gtcagttaataatta 23553532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 606 - 748
Target Start/End: Original strand, 36359905 - 36360047
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaag 705  Q
    |||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||| |  ||||||||||| ||||||| |||||||||  ||||||    
T  36359905 tccttttagtttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtatttttagtttgacagaattcccaagttagtcctttaag 36360004  T
Q  706 tttctaaagttttaaataggtctttttagttgataaactattt 748  Q
    |||  ||||||| ||||||||| ||||||||||||||||||||    
T  36360005 ttttaaaagtttcaaataggtcattttagttgataaactattt 36360047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 602 - 763
Target Start/End: Complemental strand, 25737742 - 25737580
Alignment:
Q  602 ttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaat-agattcttttagtttgatagaattcgcaagttagtttt 700  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||  |||||||||||| || |  ||||| ||||| ||||||| |||||||||  |    
T  25737742 ttgattcttttagtttgatagaatttccaagttagtcctttaagttttgaaagtttcaaattaggtctttttaatttgacagaattctcaagttagtcct 25737643  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgc 763  Q
    |||| |||| ||||||| |||||  || |||||||||||||||||||||||||||||| ||||    
T  25737642 ttaaatttcaaaagtttcaaatatttcattttagttgataaactatttcactgttacccctgc 25737580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 601 - 758
Target Start/End: Original strand, 8713845 - 8714002
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| |||||||||||||| | ||||  ||||||||||||||||| |||||||||||||| || ||||||||||||||| | ||||| ||||||||| ||    
T  8713845 tttggtccttttagtttgacataattctcaagttagtcctttaagtttcaaaagtttcaattaaattcttttagtttgacaaaattcacaagttagtctt 8713944  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
    ||||||||| ||| ||| |||||| || |||||||||||||| | |||||| ||||||    
T  8713945 ttaagtttcaaaaatttcaaatagatcattttagttgataaattgtttcaccgttacc 8714002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 601 - 780
Target Start/End: Original strand, 25737103 - 25737281
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| |||||||||||||| | ||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||  ||||||  ||||||||  |    
T  25737103 tttggtccttttagtttgacataattttcaagttagtcctttaagtttcaaaagtttcaaatagatccttttagtttgaccgaattcctaagttagtcct 25737202  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgctagtcagtaaataatta 780  Q
    |||| |||| ||||||| | ||| ||| ||||| ||||||||||||||||  |||||  ||||| |||||| ||||||||    
T  25737203 ttaaatttcaaaagtttcacatatgtcattttacttgataaactatttcatcgttacacctgct-gtcagttaataatta 25737281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 601 - 751
Target Start/End: Complemental strand, 9770919 - 9770769
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| |||||||||||||| | ||||  ||||||||||||||||| ||| |||||||||| ||  |  ||||||||||| ||||||| |||||||||  |    
T  9770919 tttggtccttttagtttgacaaaattctcaagttagtcctttaagtttcgaaagtttcaattaagtcattttagtttgacagaattcccaagttagtcct 9770820  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcac 751  Q
    |||| |||| ||||||| ||||||||| |||||||||||||||||||||||    
T  9770819 ttaattttcaaaagtttcaaataggtccttttagttgataaactatttcac 9770769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 609 - 758
Target Start/End: Original strand, 30576159 - 30576308
Alignment:
Q  609 ttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagttt 708  Q
    |||||| |||| |||||| |||||||||||||||||  ||  |||||||||| ||  | |||||||||||  ||||||  ||||||||| ||||||||||    
T  30576159 ttttagcttgacagaattcccaagttagtcctttaaattttgaaagtttcaattaagtccttttagtttgccagaatttccaagttagtcttttaagttt 30576258  T
Q  709 ctaaagttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
      ||||||| |||| ||||||||||||||||||||||||||||| |||||    
T  30576259 gaaaagtttcaaattggtctttttagttgataaactatttcactattacc 30576308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 606 - 751
Target Start/End: Complemental strand, 44041416 - 44041271
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaag 705  Q
    |||||||||||||| | ||||| ||||||||||||||||| ||  |||||||||| ||  | |||||||||||| |||||||  |||||||| ||| |||    
T  44041416 tccttttagtttgacaaaattttcaagttagtcctttaagttttgaaagtttcaattatgtccttttagtttgacagaattcctaagttagtctttaaag 44041317  T
Q  706 tttctaaagttttaaataggtctttttagttgataaactatttcac 751  Q
    |||| ||| ||| ||||| ||| |||||||||||||||||||||||    
T  44041316 tttcaaaaatttcaaataagtcattttagttgataaactatttcac 44041271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 609 - 751
Target Start/End: Complemental strand, 29794383 - 29794241
Alignment:
Q  609 ttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagttt 708  Q
    ||||||||||| |||||| |||||||||||||||||  ||| |||||||  | ||| | |||||||||||| | ||||  ||||||||| ||||||||||    
T  29794383 ttttagtttgacagaattcccaagttagtcctttaaatttcgaaagttttcattaggtccttttagtttgacataatttccaagttagtcttttaagttt 29794284  T
Q  709 ctaaagttttaaataggtctttttagttgataaactatttcac 751  Q
    | ||||||| |||||| || |||||||||||||| ||||||||    
T  29794283 caaaagtttcaaatagatccttttagttgataaattatttcac 29794241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 668 - 758
Target Start/End: Original strand, 35433903 - 35433993
Alignment:
Q  668 cttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
    |||||| ||||||||||||| |||||||||  |||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||    
T  35433903 cttttaatttgatagaattcacaagttagtcatttaagtttcaaaagttttaaatagatctttttagttgataaattatttcactgttacc 35433993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 606 - 764
Target Start/End: Original strand, 39700889 - 39701047
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaag 705  Q
    |||||||||||||| | ||||   |||||||||||||||| || ||||||||||| ||  | |||||||||||| | |||||  |||||| |  ||||||    
T  39700889 tccttttagtttgacaaaattcttaagttagtcctttaagttttaaaagtttcaattatgtccttttagtttgacaaaattcctaagttaatcctttaag 39700988  T
Q  706 tttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgct 764  Q
    |||| ||||||| ||||| ||| ||||||||||||||||||||||| |||||| |||||    
T  39700989 tttcaaaagtttcaaatatgtcattttagttgataaactatttcaccgttacccctgct 39701047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 601 - 751
Target Start/End: Original strand, 45017746 - 45017896
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| ||||||||||||||||||||| |||||||||||||||||| ||| |||||||||| ||  |  ||||||||| | ||||||| ||| |||||  |    
T  45017746 tttggtccttttagtttgatagaattcccaagttagtcctttaagtttcgaaagtttcaattatgtcattttagtttaacagaattcccaaattagtcct 45017845  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcac 751  Q
    ||||| ||| ||| ||| ||||| ||| ||||| |||||||||||||||||    
T  45017846 ttaagattcaaaaatttcaaataagtcattttaattgataaactatttcac 45017896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 602 - 750
Target Start/End: Complemental strand, 16208822 - 16208674
Alignment:
Q  602 ttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttt 701  Q
    |||||| ||||||||||| ||||||  ||||||||| ||||||| || | |  ||||||||||||  ||||||||| ||||||||  |||||||||  ||    
T  16208822 ttgatctttttagtttgacagaattctcaagttagttctttaagttttatagatttcaaatagatcattttagttttatagaattttcaagttagtcctt 16208723  T
Q  702 taagtttctaaagttttaaataggtctttttagttgataaactatttca 750  Q
    | |||||| ||||||| ||||| ||| ||||||||||||||||||||||    
T  16208722 tgagtttcaaaagtttcaaatatgtccttttagttgataaactatttca 16208674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 601 - 751
Target Start/End: Original strand, 16197028 - 16197178
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| ||||||| |||||| ||||||  ||||||||||| ||||| ||| |||||||||| ||  | |||||||||||| ||||||| ||||||| |  |    
T  16197028 tttggtccttttcgtttgacagaattatcaagttagtccattaagtttcgaaagtttcaattatgtccttttagtttgacagaattcccaagttaatcat 16197127  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcac 751  Q
    ||||||||| ||||| | ||||||||| |||||||| ||||| ||||||||    
T  16197128 ttaagtttcaaaagtatcaaataggtccttttagttaataaattatttcac 16197178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 668 - 764
Target Start/End: Original strand, 5358649 - 5358745
Alignment:
Q  668 cttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgct 764  Q
    |||||||||||| ||||||  |||||||||  || ||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||| |||||    
T  5358649 cttttagtttgacagaattttcaagttagtccttcaagtttcaaaagttttaaataggtccttttagttgataaactatttcgctgttacccctgct 5358745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 651 - 761
Target Start/End: Original strand, 9276532 - 9276642
Alignment:
Q  651 aaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttca 750  Q
    |||||||||| ||| |  || |||||||| ||||||| |||||||||   ||||||||  ||||||| ||||||||| ||||||||||||||||||||||    
T  9276532 aaagtttcaattaggtctttatagtttgacagaattctcaagttagtcagttaagttttaaaagtttcaaataggtccttttagttgataaactatttca 9276631  T
Q  751 ctgttacctct 761  Q
    |||||||||||    
T  9276632 ctgttacctct 9276642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 600 - 758
Target Start/End: Complemental strand, 31169618 - 31169461
Alignment:
Q  600 gtttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttt 699  Q
    ||||| || ||||||||||| | ||||  ||||||||||||||||| || ||| |||||||||||||  |||||||||||   ||||| ||| |||||      
T  31169618 gtttggtcattttagtttgacaaaattctcaagttagtcctttaagttttaaa-gtttcaaatagatcattttagtttgacgaaattctcaaattagtcc 31169520  T
Q  700 tttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
    |||||||||  ||||||| ||||| ||| |||||||||||||| |||||||| ||||||    
T  31169519 tttaagttttaaaagtttcaaatatgtcattttagttgataaaatatttcaccgttacc 31169461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 608 - 765
Target Start/End: Complemental strand, 23553994 - 23553837
Alignment:
Q  608 cttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagtt 707  Q
    |||||||||||| ||||||   ||||||||| |||||| ||| || |||| || ||  |  ||||||||||||||||||| ||||||||||  | |||||    
T  23553994 cttttagtttgacagaattctaaagttagtcttttaagtttcgaatgttttaattaagtcattttagtttgatagaattctcaagttagttcctcaagtt 23553895  T
Q  708 tctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgcta 765  Q
    || ||||||| |||||| || | |||||| ||||| ||||||||||||||| ||||||    
T  23553894 tcaaaagtttcaaatagatcatgttagttaataaattatttcactgttacccctgcta 23553837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 606 - 677
Target Start/End: Original strand, 4613804 - 4613875
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagttt 677  Q
    |||||||||||||| | ||||| | ||||||||||||||| |||||||||||||||||||||||||||||||    
T  4613804 tccttttagtttgacaaaattttcgagttagtcctttaagtttcaaaagtttcaaatagattcttttagttt 4613875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 601 - 751
Target Start/End: Original strand, 4613739 - 4613889
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| |||||||||||||| ||||||| ||||||| ||||||||  ||  |||||||||| ||  | |||||||||||| | ||||  | |||||||  |    
T  4613739 tttggtccttttagtttgaaagaattttcaagttaatcctttaaattttgaaagtttcaattaagtccttttagtttgacaaaattttcgagttagtcct 4613838  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcac 751  Q
    ||||||||| ||||||| |||||| |  |||||||| ||||||||||||||    
T  4613839 ttaagtttcaaaagtttcaaatagattcttttagtttataaactatttcac 4613889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 606 - 676
Target Start/End: Complemental strand, 29794326 - 29794256
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtt 676  Q
    |||||||||||||| | |||||||||||||||| |||||| |||||||||||||||||||| |||||||||    
T  29794326 tccttttagtttgacataatttccaagttagtcttttaagtttcaaaagtttcaaatagatccttttagtt 29794256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 699 - 756
Target Start/End: Original strand, 44040859 - 44040916
Alignment:
Q  699 ttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgtta 756  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  44040859 ttttaagtttcaaaagttttaaataggtcattttagttgataaactatttcactgtta 44040916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 606 - 758
Target Start/End: Complemental strand, 40553367 - 40553224
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaag 705  Q
    |||||||||||||| | |||||| ||||||||| |||||| |||||||||||||| | | | |||||||||||| ||||||| ||||||| |  ||||||    
T  40553367 tccttttagtttgacaaaatttctaagttagtcttttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaag 40553268  T
Q  706 tttctaaagttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
    ||||         |||||| || ||||| ||||||||||||||||| ||||||    
T  40553267 tttc---------aaatagatcattttacttgataaactatttcaccgttacc 40553224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 609 - 676
Target Start/End: Original strand, 13771425 - 13771492
Alignment:
Q  609 ttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtt 676  Q
    ||||||||||| ||||||| |||||||||| |||||| || |||||||||||||||||||||||||||    
T  13771425 ttttagtttgacagaattttcaagttagtcatttaagttttaaaagtttcaaatagattcttttagtt 13771492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 601 - 736
Target Start/End: Original strand, 43422857 - 43422992
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||||| |||||||||||||| ||||  ||| ||||||||||||| ||  |||||||||| ||| | |||||| |||   | ||||| |||||||||  |    
T  43422857 tttgattcttttagtttgatataattctcaaattagtcctttaagttttgaaagtttcaattaggtccttttattttagcaaaattcccaagttagtcct 43422956  T
Q  701 ttaagtttctaaagttttaaataggtctttttagtt 736  Q
    ||||||||| ||||||| ||||||||| ||||||||    
T  43422957 ttaagtttcaaaagtttcaaataggtcattttagtt 43422992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 601 - 736
Target Start/End: Complemental strand, 43423225 - 43423091
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| |||||||||||||| | |||| | ||||||||  |||||| ||| |||||||||| || | ||||||||||| ||||||||| ||| ||| |  |    
T  43423225 tttggtccttttagtttgacataattcctaagttagttatttaagtttcgaaagtttcaatta-agtcttttagtttcatagaattctcaatttactcct 43423127  T
Q  701 ttaagtttctaaagttttaaataggtctttttagtt 736  Q
    ||||||||| ||||||| ||||||||| ||||||||    
T  43423126 ttaagtttcaaaagtttcaaataggtcattttagtt 43423091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 669 - 759
Target Start/End: Complemental strand, 13771932 - 13771842
Alignment:
Q  669 ttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacct 759  Q
    ||||||||||| | ||||| |||||||||  |||||||||| ||||||| ||||| ||| ||||| ||||||||| |||||||||||||||    
T  13771932 ttttagtttgacataattcccaagttagtcctttaagtttcaaaagtttcaaatatgtcattttatttgataaaccatttcactgttacct 13771842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 668 - 757
Target Start/End: Complemental strand, 34686964 - 34686875
Alignment:
Q  668 cttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttac 757  Q
    |||||| ||||| ||||||  |||||||||  ||||| |||  ||||||||||||||||| ||||||||||||||||||||||| |||||    
T  34686964 cttttaatttgacagaattatcaagttagtcctttaaattttaaaagttttaaataggtccttttagttgataaactatttcaccgttac 34686875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 609 - 717
Target Start/End: Complemental strand, 36360200 - 36360092
Alignment:
Q  609 ttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagttt 708  Q
    ||||||||||| |||||||||||||||||| |||||| ||| |||||||||||||  |  ||||| ||||| | ||||  |||||||||  |||||||||    
T  36360200 ttttagtttgacagaatttccaagttagtcttttaagtttcgaaagtttcaaataagtctttttaatttgacaaaattgccaagttagtcctttaagttt 36360101  T
Q  709 ctaaagttt 717  Q
    | |||||||    
T  36360100 caaaagttt 36360092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 605 - 676
Target Start/End: Original strand, 5358646 - 5358717
Alignment:
Q  605 atccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtt 676  Q
    ||||||||||||||| ||||||| ||||||||||||| ||| ||||||||||| |||||| | |||||||||    
T  5358646 atccttttagtttgacagaattttcaagttagtccttcaagtttcaaaagttttaaataggtccttttagtt 5358717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 608 - 697
Target Start/End: Complemental strand, 43423159 - 43423070
Alignment:
Q  608 cttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagt 697  Q
    |||||||||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| |  ||||||||||| | ||||| |||||||||    
T  43423159 cttttagtttcatagaattctcaatttactcctttaagtttcaaaagtttcaaataggtcattttagtttgacaaaattcccaagttagt 43423070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 601 - 709
Target Start/End: Original strand, 9770560 - 9770668
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| ||||| ||| |||| |||||| |||||||| || |||||| ||| |||||||||| ||  | |||||||||||| ||||||| |||||||||  |    
T  9770560 tttgctccttgtagattgacagaattcccaagttaatcatttaagtttcgaaagtttcaattaagtccttttagtttgagagaattctcaagttagtcat 9770659  T
Q  701 ttaagtttc 709  Q
    |||||||||    
T  9770660 ttaagtttc 9770668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 601 - 748
Target Start/End: Complemental strand, 14871481 - 14871342
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttag-tttgatagaattcgcaagttagttt 699  Q
    |||| |||||| ||||||| |||||| | ||||||||| |||||| ||| |||||||||| ||| ||||||||| ||||| | ||||| ||| |||||      
T  14871481 tttggtcctttaagtttgacagaattcctaagttagtcttttaagtttcgaaagtttcaattaggttcttttagttttgacataattctcaaattagtcc 14871382  T
Q  700 tttaagtttctaaagttttaaataggtctttttagttgataaactattt 748  Q
    ||||||||||         ||||||||| ||||||||||||||||||||    
T  14871381 tttaagtttc---------aaataggtccttttagttgataaactattt 14871342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 606 - 694
Target Start/End: Complemental strand, 29792646 - 29792558
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagtt 694  Q
    |||||||||||||| |||||| |||| ||||||||||||  ||| |||||||| | ||||| |||||||||||| | ||||| ||||||    
T  29792646 tccttttagtttgacagaattcccaaattagtcctttaaatttcgaaagtttctattagatccttttagtttgacataattctcaagtt 29792558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 629 - 780
Target Start/End: Original strand, 6235760 - 6235907
Alignment:
Q  629 caagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattc-gcaagttagttttttaagtttctaaagttttaaataggtc 727  Q
    ||||||||| ||||||| ||||||    | ||||||||  ||||||||||| ||||||| | |||||| |  ||||| |||| ||||||| ||||||       
T  6235760 caagttagttctttaagtttcaaa----ttaaatagatcattttagtttgacagaattccgaaagttaatcctttaaatttcaaaagtttcaaatagact 6235855  T
Q  728 tttttagttgataaactatttcactgttacctctgctagtcagtaaataatta 780  Q
     |||||||||||||||||||||||  ||||||||||| |||||| ||||||||    
T  6235856 attttagttgataaactatttcacctttacctctgct-gtcagttaataatta 6235907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 601 - 676
Target Start/End: Original strand, 35433896 - 35433971
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtt 676  Q
    |||| |||||||| ||||||||||||  |||||||||| |||||| ||||||||||| ||||||||  ||||||||    
T  35433896 tttggtccttttaatttgatagaattcacaagttagtcatttaagtttcaaaagttttaaatagatctttttagtt 35433971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 668 - 751
Target Start/End: Complemental strand, 35434396 - 35434313
Alignment:
Q  668 cttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcac 751  Q
    |||||||||||| | |||||  |||||| |  |||||||||| ||||||| ||||| ||| |||||||||||||||||||||||    
T  35434396 cttttagtttgacataattcctaagttaatcctttaagtttcaaaagtttcaaatatgtcattttagttgataaactatttcac 35434313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 601 - 736
Target Start/End: Complemental strand, 40553432 - 40553297
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| |||||||||||||| | |||| | || |||||||||| || || |||||||||||  || | |||||||||||| | ||||   |||||||| ||    
T  40553432 tttggtccttttagtttgacataattcctaacttagtcctttgagtttaaaaagtttcaatcaggtccttttagtttgacaaaatttctaagttagtctt 40553333  T
Q  701 ttaagtttctaaagttttaaataggtctttttagtt 736  Q
    ||||||||| ||||||| || | |||| ||||||||    
T  40553332 ttaagtttcaaaagtttcaatttggtccttttagtt 40553297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 652
Target Start/End: Original strand, 11113615 - 11113661
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaa 652  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||    
T  11113615 tccttttagtttgacagaatttccaagttagtcctttaagtttcaaa 11113661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 669 - 751
Target Start/End: Original strand, 13771425 - 13771507
Alignment:
Q  669 ttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcac 751  Q
    ||||||||||| ||||||  |||||||||  |||||||||  ||||||| |||||| |  |||||||||||||||||||||||    
T  13771425 ttttagtttgacagaattttcaagttagtcatttaagttttaaaagtttcaaatagattcttttagttgataaactatttcac 13771507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 609 - 663
Target Start/End: Complemental strand, 13771932 - 13771878
Alignment:
Q  609 ttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaata 663  Q
    ||||||||||| | |||| |||||||||||||||||| |||||||||||||||||    
T  13771932 ttttagtttgacataattcccaagttagtcctttaagtttcaaaagtttcaaata 13771878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 623 - 697
Target Start/End: Original strand, 43422939 - 43423013
Alignment:
Q  623 aatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagt 697  Q
    |||| |||||||||||||||||| |||||||||||||||||| |  ||||||||||| | ||||  |||||||||    
T  43422939 aattcccaagttagtcctttaagtttcaaaagtttcaaataggtcattttagtttgacaaaatttccaagttagt 43423013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 604 - 709
Target Start/End: Original strand, 11113553 - 11113658
Alignment:
Q  604 gatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttttta 703  Q
    |||||||||||||||| | |||| | |||||||||||||||  ||  ||||||||||  || | |||||||||||| ||||||  |||||||||  ||||    
T  11113553 gatccttttagtttgacataattcctaagttagtcctttaaattttgaaagtttcaatcaggtccttttagtttgacagaatttccaagttagtccttta 11113652  T
Q  704 agtttc 709  Q
    ||||||    
T  11113653 agtttc 11113658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 606 - 662
Target Start/End: Original strand, 30576216 - 30576272
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaat 662  Q
    |||||||||||||  |||||||||||||||||| |||||| || |||||||||||||    
T  30576216 tccttttagtttgccagaatttccaagttagtcttttaagtttgaaaagtttcaaat 30576272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 700 - 752
Target Start/End: Original strand, 34686509 - 34686561
Alignment:
Q  700 tttaagtttctaaagttttaaataggtctttttagttgataaactatttcact 752  Q
    |||||||||  |||||||||||||| ||||||||||||||| |||||||||||    
T  34686509 tttaagttttaaaagttttaaatagatctttttagttgatagactatttcact 34686561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 669 - 733
Target Start/End: Complemental strand, 36360200 - 36360136
Alignment:
Q  669 ttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtcttttta 733  Q
    ||||||||||| ||||||  ||||||||| ||||||||||| ||||||| ||||| |||||||||    
T  36360200 ttttagtttgacagaatttccaagttagtcttttaagtttcgaaagtttcaaataagtcttttta 36360136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 274 - 369
Target Start/End: Original strand, 39434562 - 39434658
Alignment:
Q  274 caagctgcgttgctaaccctttttagatggtaaaatcaattttcttaaacacaacattcat-gatctatgagccataacattgatatgcatgaccct 369  Q
    |||||||||  ||||  ||||||| ||||| |||||||||  || |||||||||||||||| |||||| ||| ||| |||||||||||||| |||||    
T  39434562 caagctgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattcatggatctaagagacattacattgatatgcataaccct 39434658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 609 - 765
Target Start/End: Original strand, 40552769 - 40552925
Alignment:
Q  609 ttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagttt 708  Q
    ||||||||||| ||||||| ||||||| || |||||  ||  |||||||||| ||   | ||||||||||| | ||||  ||||||||   ||||| |||    
T  40552769 ttttagtttgacagaattttcaagttaatcatttaaattttgaaagtttcaattaagatattttagtttgacaaaattttcaagttagccatttaaattt 40552868  T
Q  709 ctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgcta 765  Q
    | ||| ||| ||||||||  ||| | |||||||| ||||||||||||||| ||||||    
T  40552869 caaaaatttcaaataggttctttaaattgataaaatatttcactgttacccctgcta 40552925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 291 - 385
Target Start/End: Original strand, 3187882 - 3187977
Alignment:
Q  291 cctttttagatggtaaaatcaattttcttaaacacaacattcat-gatctatgagccataacattgatatgcatgaccctctaactatatgtagaa 385  Q
    ||||||| ||||| |||| ||||| || |||||||||||||||| || ||| ||| |||||||||| ||||||| ||||| | ||| |||||||||    
T  3187882 cctttttggatggcaaaaccaattctcgtaaacacaacattcatggacctaggagacataacattgctatgcataaccctttgactctatgtagaa 3187977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 606 - 709
Target Start/End: Complemental strand, 6236357 - 6236254
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaag 705  Q
    |||||||||||| | | |||| |||||||| | ||||||| ||||| |||||||| ||| | |||||| ||||| ||| ||| |||||||||  ||||||    
T  6236357 tccttttagttttacaaaattcccaagttatttctttaagtttcaatagtttcaattaggtccttttaatttgacagacttcccaagttagtactttaag 6236258  T
Q  706 tttc 709  Q
    ||||    
T  6236257 tttc 6236254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 606 - 661
Target Start/End: Original strand, 9770676 - 9770731
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaa 661  Q
    |||||||||||||| |||||| | |||||||||||||||| ||||||| |||||||    
T  9770676 tccttttagtttgacagaattccgaagttagtcctttaagtttcaaaaatttcaaa 9770731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 601 - 651
Target Start/End: Original strand, 23179046 - 23179096
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaa 651  Q
    |||| |||||||||||||| |||||| |||||||||||||||||| |||||    
T  23179046 tttggtccttttagtttgacagaattcccaagttagtcctttaagtttcaa 23179096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 601 - 663
Target Start/End: Complemental strand, 35434403 - 35434341
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaata 663  Q
    |||| |||||||||||||| | |||| | |||||| ||||||||| |||||||||||||||||    
T  35434403 tttggtccttttagtttgacataattcctaagttaatcctttaagtttcaaaagtttcaaata 35434341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 274 - 385
Target Start/End: Original strand, 38815189 - 38815302
Alignment:
Q  274 caagctgcgttgctaaccctttttagatggtaaaatcaattttcttaaacacaacattcat-gatctatgagccataacattgatatgcatgaccctct- 371  Q
    |||||||||  ||||| ||||||| ||||| |||| ||||  || |||||||||||||||| || ||| ||| ||| |||||| ||||||||||||| |     
T  38815189 caagctgcgccgctaagcctttttggatggaaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctatgcatgaccctttg 38815288  T
Q  372 aactatatgtagaa 385  Q
    |||| |||||||||    
T  38815289 aactctatgtagaa 38815302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 608 - 721
Target Start/End: Complemental strand, 41190397 - 41190284
Alignment:
Q  608 cttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagtt 707  Q
    |||||||||||| ||||||  ||| ||||| ||||||  ||| ||| |||||| ||| |  ||||||||||||||||||| |||  ||||  ||||||||    
T  41190397 cttttagtttgacagaattctcaaattagttctttaaatttcgaaaatttcaattaggtcattttagtttgatagaattctcaatctagtcatttaagtt 41190298  T
Q  708 tctaaagttttaaa 721  Q
    || ||| |||||||    
T  41190297 tcaaaaattttaaa 41190284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 606 - 679
Target Start/End: Complemental strand, 45018047 - 45017974
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttga 679  Q
    |||||||||||||| | ||| | ||||||||||||||||| ||| ||||||| || ||| | ||||||||||||    
T  45018047 tccttttagtttgacaaaatcttcaagttagtcctttaagtttcgaaagttttaattaggtccttttagtttga 45017974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 609 - 661
Target Start/End: Complemental strand, 36360140 - 36360088
Alignment:
Q  609 ttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaa 661  Q
    ||||| ||||| | |||| |||||||||||||||||| |||||||||||||||    
T  36360140 ttttaatttgacaaaattgccaagttagtcctttaagtttcaaaagtttcaaa 36360088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 606 - 676
Target Start/End: Complemental strand, 34686966 - 34686896
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtt 676  Q
    |||||||| ||||| ||||||  ||||||||||||||||  || |||||||| |||||| | |||||||||    
T  34686966 tccttttaatttgacagaattatcaagttagtcctttaaattttaaaagttttaaataggtccttttagtt 34686896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 652 - 709
Target Start/End: Original strand, 9770662 - 9770719
Alignment:
Q  652 aagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagtttc 709  Q
    ||||||||||||| | |||||||||||| |||||||  ||||||||  ||||||||||    
T  9770662 aagtttcaaataggtccttttagtttgacagaattccgaagttagtcctttaagtttc 9770719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 305 - 366
Target Start/End: Complemental strand, 10556473 - 10556412
Alignment:
Q  305 aaaatcaattttcttaaacacaacattcatgatctatgagccataacattgatatgcatgac 366  Q
    ||||||||||||  || ||||||||||||||| ||||||||||  |||||| | ||||||||    
T  10556473 aaaatcaatttttgtagacacaacattcatgaactatgagccacgacattgttttgcatgac 10556412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 667 - 736
Target Start/End: Complemental strand, 41190398 - 41190329
Alignment:
Q  667 tcttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagtt 736  Q
    ||||||||||||| ||||||| ||| |||||| ||||| |||| ||| ||| || |||||| ||||||||    
T  41190398 tcttttagtttgacagaattctcaaattagttctttaaatttcgaaaatttcaattaggtcattttagtt 41190329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 99; Significance: 2e-48; HSPs: 84)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 600 - 780
Target Start/End: Original strand, 5559106 - 5559287
Alignment:
Q  600 gtttgatccttttagtttgatagaatttccaagttagtccttt-aagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtt 698  Q
    ||||| |||||||| ||||| |||||| ||||||||||||||| ||| |||||||||||||||||||| |||||||||||||| ||||| |||||||||     
T  5559106 gtttggtccttttaatttgacagaattcccaagttagtccttttaagtttcaaaagtttcaaatagatccttttagtttgataaaattcccaagttagtc 5559205  T
Q  699 -ttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgctagtcagtaaataatta 780  Q
     ||||||||||| ||||||| ||||||||| ||||||||||||||||||||||| |||||| |||| ||||||| ||||||||    
T  5559206 cttttaagtttcaaaagtttcaaataggtccttttagttgataaactatttcaccgttacccctgc-agtcagttaataatta 5559287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 601 - 758
Target Start/End: Original strand, 35214806 - 35214964
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtccttt-aagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttt 699  Q
    ||||||||||||||||||| |||||||| |||||||| |||| ||| |||||||||||||| ||| | |||||||||||| ||||||| ||||||||| |    
T  35214806 tttgatccttttagtttgacagaatttctaagttagttcttttaagtttcaaaagtttcaattaggtccttttagtttgacagaattctcaagttagtct 35214905  T
Q  700 tttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
    |||||||||| ||| ||| ||||||||||||||||||||||||||||||||| ||||||    
T  35214906 tttaagtttcaaaaatttcaaataggtctttttagttgataaactatttcaccgttacc 35214964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 601 - 758
Target Start/End: Original strand, 28256493 - 28256650
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    ||||||||||||||||||| |||||| |||||||| | ||||||  ||||||||||| ||| |||| |||||||||||| ||||||| |||||||||  |    
T  28256493 tttgatccttttagtttgacagaattcccaagttacttctttaaatttcaaaagttttaaagagatccttttagtttgacagaattctcaagttagtcct 28256592  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
    |||| |||| ||||||| ||||||||  ||||||||||||||||||||||||||||||    
T  28256593 ttaaatttcaaaagtttcaaataggttcttttagttgataaactatttcactgttacc 28256650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 606 - 749
Target Start/End: Original strand, 5805043 - 5805186
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaag 705  Q
    |||||||||||||| ||||||  ||||||||||||||||| ||| |||||||||| ||| | |||||||||||| ||||||| |||| || |  ||||||    
T  5805043 tccttttagtttgacagaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaattctcaagctattcctttaag 5805142  T
Q  706 tttctaaagttttaaataggtctttttagttgataaactatttc 749  Q
    |||| |||||||||| |||||| |||||||||||||||||||||    
T  5805143 tttcaaaagttttaactaggtccttttagttgataaactatttc 5805186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 604 - 722
Target Start/End: Original strand, 21412929 - 21413047
Alignment:
Q  604 gatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttttta 703  Q
    |||||||||||||||| ||||||| ||||||||||||||||| ||||||||||| ||||||||  ||||||||| | ||||||| ||||||||| |||||    
T  21412929 gatccttttagtttgacagaattttcaagttagtcctttaagtttcaaaagttttaaatagatcattttagtttcacagaattctcaagttagtctttta 21413028  T
Q  704 agtttctaaagttttaaat 722  Q
    |||||| ||||||||||||    
T  21413029 agtttcaaaagttttaaat 21413047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 601 - 742
Target Start/End: Complemental strand, 20366662 - 20366521
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| |||||||||||  | ||||||||||||||||||||||||| |||||||||||| || |||| |||||||||||| | |||||||||||||||  |    
T  20366662 tttggtccttttagttaaacagaatttccaagttagtcctttaagtttcaaaagtttccaaaagatccttttagtttgacaaaattcgcaagttagtcct 20366563  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaa 742  Q
    ||| ||||| ||||||| ||||| ||| ||||||||||||||    
T  20366562 ttaggtttcaaaagtttcaaatatgtccttttagttgataaa 20366521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 600 - 780
Target Start/End: Original strand, 27995060 - 27995239
Alignment:
Q  600 gtttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttt 699  Q
    ||||| |||||||||||||| ||||||  |||||||||  |||||| ||||||| ||| ||||||||  ||||| ||||| ||||||| ||||||| |      
T  27995060 gtttggtccttttagtttgacagaattctcaagttagtgttttaagtttcaaaaatttgaaatagatcattttaatttgacagaattctcaagttaatcc 27995159  T
Q  700 tttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgctagtcagtaaataatta 780  Q
    |||||||||| ||||| | ||||| ||  |||||||||||||||||||||||||||||| ||||| |||||| ||||||||    
T  27995160 tttaagtttcaaaagtatcaaataagtaattttagttgataaactatttcactgttacccctgct-gtcagttaataatta 27995239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 600 - 756
Target Start/End: Complemental strand, 39959319 - 39959163
Alignment:
Q  600 gtttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttt 699  Q
    ||||| |||||||||||||| |||||||  || |||||| |||||  || |||||||||||||||||||||||||||||| ||||||  ||||||| |      
T  39959319 gtttggtccttttagtttgacagaatttttaaattagtcatttaaatttgaaaagtttcaaatagattcttttagtttgacagaatttccaagttaatca 39959220  T
Q  700 tttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgtta 756  Q
    |||||||||| ||||||| ||||||||  ||||| ||||||||||||||||| ||||    
T  39959219 tttaagtttcaaaagtttcaaataggttcttttacttgataaactatttcaccgtta 39959163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 601 - 764
Target Start/End: Complemental strand, 1441557 - 1441403
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| |||||||||||||| | |||| |||||||||||||||| | ||| |||||||||| ||| |  ||||||||||||||||||| ||||||||| ||    
T  1441557 tttggtccttttagtttgacataattcccaagttagtcctttaggtttcgaaagtttcaattaggtcattttagtttgatagaattcccaagttagtctt 1441458  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgct 764  Q
    |||||||||         ||||||||| |||||||||||||||||||||||||||||| |||||    
T  1441457 ttaagtttc---------aaataggtccttttagttgataaactatttcactgttacccctgct 1441403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 608 - 751
Target Start/End: Complemental strand, 19925455 - 19925312
Alignment:
Q  608 cttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagtt 707  Q
    |||||||||||| | |||| |||| ||||||||||||| | | ||||||| || ||||| |||||||||||| ||||||| |||||||||  ||||||||    
T  19925455 cttttagtttgacaaaattcccaacttagtcctttaagttgcgaaagttttaattagatccttttagtttgacagaattcccaagttagtcctttaagtt 19925356  T
Q  708 tctaaagttttaaataggtctttttagttgataaactatttcac 751  Q
    || ||||||| ||||||||| ||| |||||||||||||||||||    
T  19925355 tcaaaagtttcaaataggtcctttcagttgataaactatttcac 19925312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 606 - 742
Target Start/End: Original strand, 1286375 - 1286511
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaag 705  Q
    |||||||||||||||||||||| ||| |||||  |||||  |||||||||||||| ||| | |||||||||||| |||||||  |||||||| |||||||    
T  1286375 tccttttagtttgatagaattttcaaattagttttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaag 1286474  T
Q  706 tttctaaagttttaaataggtctttttagttgataaa 742  Q
    |||| ||||||| ||||||||  ||||||||||||||    
T  1286475 tttcaaaagtttcaaataggttcttttagttgataaa 1286511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 608 - 750
Target Start/End: Complemental strand, 6220492 - 6220351
Alignment:
Q  608 cttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagtt 707  Q
    |||||||||||||| ||||| ||||||| | |||||| |||  ||||||||||  || | |||||||||| ||||||||| |||||||| | ||||||||    
T  6220492 cttttagtttgatataattttcaagttaattctttaaaattataaagtttcaataaggtacttttagtttcatagaattctcaagttag-tctttaagtt 6220394  T
Q  708 tctaaagttttaaataggtctttttagttgataaactatttca 750  Q
    || |||||||| |||||||  ||||||||||||||||||||||    
T  6220393 tcaaaagttttcaataggttcttttagttgataaactatttca 6220351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 601 - 709
Target Start/End: Complemental strand, 31893600 - 31893492
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| |||||||||||||| |||||||| |||||||||||||||| || ||||||||||| ||| | |||||||||||| ||||||| |||||||||  |    
T  31893600 tttggtccttttagtttgacagaatttctaagttagtcctttaagttttaaaagtttcaattaggtccttttagtttgacagaattctcaagttagtcct 31893501  T
Q  701 ttaagtttc 709  Q
    |||||||||    
T  31893500 ttaagtttc 31893492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 608 - 758
Target Start/End: Complemental strand, 1349269 - 1349116
Alignment:
Q  608 cttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagtta---gttttttaa 704  Q
    |||||||||||| | |||||| ||||||||| |||||| ||||||||||| ||||| ||  ||||||||||| ||||||  ||| |||   ||  |||||    
T  1349269 cttttagtttgacataatttctaagttagtcttttaagtttcaaaagttttaaataaatcattttagtttgacagaatttccaacttataagtcctttaa 1349170  T
Q  705 gtttctaaagttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
    ||||| ||||||| ||||||||| ||||||||||||||| ||||||| ||||||    
T  1349169 gtttcaaaagtttcaaataggtcattttagttgataaaccatttcaccgttacc 1349116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 601 - 736
Target Start/End: Complemental strand, 33879640 - 33879505
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| |||||||||||||| ||||||  ||||||||||||||||| ||| |||||||||| ||| | |||||| ||||| ||||||  ||||||| |  |    
T  33879640 tttggtccttttagtttgacagaattcacaagttagtcctttaagtttcgaaagtttcaattaggtccttttaatttgacagaatttccaagttaatcct 33879541  T
Q  701 ttaagtttctaaagttttaaataggtctttttagtt 736  Q
    ||||||||| ||||||| ||||||||| ||||||||    
T  33879540 ttaagtttcaaaagtttcaaataggtccttttagtt 33879505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 606 - 736
Target Start/End: Original strand, 21412871 - 21413001
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaag 705  Q
    |||||||||||||| ||||||   |||||| ||||||||| ||  |||||||||| ||||| |||||||||||| ||||||  |||||||||  ||||||    
T  21412871 tccttttagtttgacagaattcttaagttaatcctttaagttttgaaagtttcaattagatccttttagtttgacagaattttcaagttagtcctttaag 21412970  T
Q  706 tttctaaagttttaaataggtctttttagtt 736  Q
    |||| |||||||||||||| || ||||||||    
T  21412971 tttcaaaagttttaaatagatcattttagtt 21413001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 600 - 758
Target Start/End: Complemental strand, 35215449 - 35215291
Alignment:
Q  600 gtttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttt 699  Q
    |||||||||||||||||||| | ||||| ||||||||||||||||  ||| ||| |||||| ||  |  ||||| ||||| ||||||  ||| ||||| |    
T  35215449 gtttgatccttttagtttgacaaaattttcaagttagtcctttaaatttcgaaaatttcaattaagtcattttaatttgacagaatttccaaattagtct 35215350  T
Q  700 tttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
    |||||||||  ||||||| |||||  || |||||||||||||||||||||| |||||||    
T  35215349 tttaagttttaaaagtttcaaataactcattttagttgataaactatttcattgttacc 35215291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 609 - 750
Target Start/End: Original strand, 33235042 - 33235183
Alignment:
Q  609 ttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagttt 708  Q
    ||||||||||| ||||||  ||||||| ||||||||  || ||||||||||| ||| | ||||| |||||| ||||||| ||||||||   ||||| |||    
T  33235042 ttttagtttgacagaattctcaagttaatcctttaaattttaaaagtttcaattaggtccttttggtttgacagaattcccaagttagacctttaaattt 33235141  T
Q  709 ctaaagttttaaataggtctttttagttgataaactatttca 750  Q
    | ||||||| ||| ||||| ||||||||||||||||||||||    
T  33235142 caaaagtttcaaagaggtcattttagttgataaactatttca 33235183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 600 - 780
Target Start/End: Complemental strand, 8040271 - 8040102
Alignment:
Q  600 gtttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttt 699  Q
    ||||| |||||||||||| |  |||||||||| |||||| |||||| ||||||| |||||||||||| ||||||| |||| |||| || |||||||||      
T  8040271 gtttggtccttttagtttaacggaatttccaaattagtcttttaagtttcaaaaatttcaaatagatccttttagcttgacagaa-tcccaagttagtcc 8040173  T
Q  700 tttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgctagtcagtaaataatta 780  Q
    ||||||||||         ||||||||| ||||||||||| ||||||||||| |||||| ||||| |||||| ||||||||    
T  8040172 tttaagtttc---------aaataggtccttttagttgatgaactatttcaccgttacccctgct-gtcagttaataatta 8040102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 652 - 756
Target Start/End: Original strand, 10619851 - 10619955
Alignment:
Q  652 aagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcac 751  Q
    ||||||||| ||| |||||||||||||| | ||||  |||||||||  |||||||||| ||||||| ||||||||| |||||||||||||||||||||||    
T  10619851 aagtttcaattaggttcttttagtttgacacaattgtcaagttagtcctttaagtttcaaaagtttcaaataggtccttttagttgataaactatttcac 10619950  T
Q  752 tgtta 756  Q
     ||||    
T  10619951 cgtta 10619955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 652 - 780
Target Start/End: Complemental strand, 23679603 - 23679477
Alignment:
Q  652 aagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcac 751  Q
    ||||||||| ||| |||||||||||||| ||||||| ||||||||| ||| ||||||| ||||||| |||||| |  |||||||||||||||||||||||    
T  23679603 aagtttcaattaggttcttttagtttgacagaattctcaagttagtcttt-aagtttcaaaagtttaaaatagattattttagttgataaactatttcac 23679505  T
Q  752 tgttacctctgctagtcagtaaataatta 780  Q
     ||||||  |||| |||||| ||||||||    
T  23679504 cgttacccttgct-gtcagttaataatta 23679477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 601 - 736
Target Start/End: Original strand, 21433144 - 21433279
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    ||||||||||||||||||| | ||||  ||||||||||||||||| ||| || ||||||| ||  | |||||||||||| ||||||| |||||||||  |    
T  21433144 tttgatccttttagtttgacaaaattcacaagttagtcctttaagtttcgaatgtttcaattaagtccttttagtttgaaagaattcccaagttagtcat 21433243  T
Q  701 ttaagtttctaaagttttaaataggtctttttagtt 736  Q
    ||||||||| ||||||| ||||| ||  ||||||||    
T  21433244 ttaagtttcaaaagtttcaaataagttcttttagtt 21433279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 668 - 762
Target Start/End: Original strand, 28104304 - 28104398
Alignment:
Q  668 cttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctg 762  Q
    |||||||||||  | ||||| |||| ||||  |||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  28104304 cttttagtttggcataattcacaaggtagtcatttaagtttcaaaagttttaaatatgtctttttagttgataaattatttcactgttacctctg 28104398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 598 - 751
Target Start/End: Original strand, 23150636 - 23150789
Alignment:
Q  598 atgtttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagt 697  Q
    ||||||| |||||||||||||| | ||||  ||||||||||||||||  ||  |||||||||| ||  |  ||||| ||||| ||||||| ||  |||||    
T  23150636 atgtttggtccttttagtttgacataattctcaagttagtcctttaaattttgaaagtttcaattaagtcattttaatttgacagaattctcagattagt 23150735  T
Q  698 tttttaagtttctaaagttttaaataggtctttttagttgataaactatttcac 751  Q
     ||||||||||| ||||||| |||||  || |||||||||||||||||||||||    
T  23150736 cttttaagtttcaaaagtttcaaataaatcattttagttgataaactatttcac 23150789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 601 - 754
Target Start/End: Original strand, 34951228 - 34951380
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    ||||||| ||||||||||| |  ||| ||||  ||||| |||||| ||| |||||||||| ||| | ||||| |||||| | |||||  ||||||||  |    
T  34951228 tttgatctttttagtttgacaatattcccaacatagtc-tttaagtttcgaaagtttcaattaggtccttttcgtttgacataattcttaagttagtcct 34951326  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgt 754  Q
    ||||||||| ||||||| ||||| ||| ||||||||||||||||||||||||||    
T  34951327 ttaagtttcaaaagtttcaaataagtcattttagttgataaactatttcactgt 34951380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 601 - 765
Target Start/End: Complemental strand, 5559741 - 5559588
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| |||||||||||||| | |||| |||||||||||||||||| || ||| ||||||| ||| | |||||||||||| ||||||| |||||||||  |    
T  5559741 tttggtccttttagtttgacaaaattcccaagttagtcctttaagttttaaa-gtttcaattaggtccttttagtttgacagaattcccaagttagtcct 5559643  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgcta 765  Q
    |||||||||         ||||| ||||||||||||||| ||||||||||| |||||| ||||||    
T  5559642 ttaagtttc---------aaataagtctttttagttgat-aactatttcaccgttacccctgcta 5559588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 600 - 763
Target Start/End: Complemental strand, 1286927 - 1286767
Alignment:
Q  600 gtttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttt 699  Q
    ||||| |||||||||||| |||||||||  |||| |||| |||||  ||||||||||| |||||||| || | | ||||||||||||  ||| |||||      
T  1286927 gtttggtccttttagtttcatagaatttttaagtcagtcatttaat-ttcaaaagttttaaatagatcctataa-tttgatagaattttcaaattagtcc 1286830  T
Q  700 tttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgc 763  Q
    |||||||||  ||||||||||||| ||| |||||||||||||| |||||||| |||||| ||||    
T  1286829 tttaagttttaaaagttttaaatatgtc-ttttagttgataaattatttcaccgttacccctgc 1286767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 601 - 749
Target Start/End: Original strand, 1346480 - 1346624
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    ||||||||||||||||||| ||||||   |||||||| ||||||| ||| |||||||||| || || |||||||||||| | ||||  |||||||||  |    
T  1346480 tttgatccttttagtttgacagaattcttaagttagtgctttaagtttcgaaagtttcaattaaatccttttagtttgacataatttccaagttagtcct 1346579  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttc 749  Q
    ||||||||| ||||||| ||    ||  |||||||||||||||||||||    
T  1346580 ttaagtttcaaaagtttcaa----gttcttttagttgataaactatttc 1346624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 601 - 760
Target Start/End: Original strand, 20101823 - 20101980
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    ||||||| |||||||||||  ||||| ||||||||||  |||||| ||| |||||||||| ||||| ||||||||| || ||| ||  |||||||||  |    
T  20101823 tttgatcattttagtttgactgaattcccaagttagtt-tttaagtttcgaaagtttcaattagatccttttagttcgacagatttt-caagttagtcct 20101920  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctc 760  Q
    ||||||||  |||||||||||||| |  | ||||||||||||||||||||| || |||||    
T  20101921 ttaagttttaaaagttttaaatagattctcttagttgataaactatttcaccgtcacctc 20101980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 606 - 697
Target Start/End: Complemental strand, 33879575 - 33879484
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagt 697  Q
    |||||||| ||||| ||||||||||||||| ||||||||| |||||||||||||||||| | ||||||||| || | ||||| |||||||||    
T  33879575 tccttttaatttgacagaatttccaagttaatcctttaagtttcaaaagtttcaaataggtccttttagttcgacataattcccaagttagt 33879484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 606 - 676
Target Start/End: Complemental strand, 31176016 - 31175946
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtt 676  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| || | |||||||||    
T  31176016 tccttttagtttgacagaatttccaagttagtcctttaagtttcaaaagtttcaaagaggtccttttagtt 31175946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 609 - 758
Target Start/End: Original strand, 20183778 - 20183926
Alignment:
Q  609 ttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagttt 708  Q
    ||||||||||| ||||||| ||| | ||| ||||||  ||  |||||||||| ||||| |||| | ||| ||||| ||| |||||||||  |||||||||    
T  20183778 ttttagtttgacagaatttacaattcagttctttaaattttgaaagtttcaattagatcctttaa-tttaatagagttcccaagttagtcctttaagttt 20183876  T
Q  709 ctaaagttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
    | ||| ||| ||||| ||| |||||||||||||| |||||||||||||||    
T  20183877 caaaaatttcaaataagtcattttagttgataaattatttcactgttacc 20183926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 601 - 758
Target Start/End: Original strand, 20366049 - 20366204
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| |||||||||||| | ||||||  ||||||||||||||||| ||| |||||||||| ||  | |||||||||||| ||||||| || || | |       
T  20366049 tttggtccttttagttt-acagaattctcaagttagtcctttaagtttcgaaagtttcaattatgtccttttagtttgacagaattctca-gtcaatccc 20366146  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
    |||  |||| | ||||| ||||||||||||||||||||||||||||||||| ||||||    
T  20366147 ttatatttcaagagtttcaaataggtctttttagttgataaactatttcaccgttacc 20366204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 606 - 679
Target Start/End: Original strand, 21433209 - 21433282
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttga 679  Q
    |||||||||||||| |||||| ||||||||||| |||||| |||||||||||||||||  ||||||||||||||    
T  21433209 tccttttagtttgaaagaattcccaagttagtcatttaagtttcaaaagtttcaaataagttcttttagtttga 21433282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 609 - 709
Target Start/End: Complemental strand, 21433391 - 21433290
Alignment:
Q  609 ttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagt-tttttaagtt 707  Q
    ||||||||||| |||||| |||||||| ||||||||| |||||||||||||||||  || |||| |||||| ||||||| |||||||||  |||||||||    
T  21433391 ttttagtttgacagaattcccaagttaatcctttaagtttcaaaagtttcaaataagttatttttgtttgacagaattcccaagttagtacttttaagtt 21433292  T
Q  708 tc 709  Q
    ||    
T  21433291 tc 21433290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 604 - 664
Target Start/End: Complemental strand, 19925399 - 19925339
Alignment:
Q  604 gatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatag 664  Q
    |||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||    
T  19925399 gatccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtttcaaatag 19925339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 630 - 762
Target Start/End: Complemental strand, 31176052 - 31175920
Alignment:
Q  630 aagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctt 729  Q
    |||||| ||||||||  ||  |||||||||| ||| | |||||||||||| ||||||  |||||||||  |||||||||| ||||||| ||| ||||| |    
T  31176052 aagttaatcctttaatttttgaaagtttcaattaggtccttttagtttgacagaatttccaagttagtcctttaagtttcaaaagtttcaaagaggtcct 31175953  T
Q  730 tttagttgataaactatttcactgttacctctg 762  Q
    |||||||||||| ||||| ||  ||||||||||    
T  31175952 tttagttgataatctattccaacgttacctctg 31175920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 274 - 365
Target Start/End: Original strand, 32584495 - 32584587
Alignment:
Q  274 caagctgcgttgctaaccctttttagatggtaaaatcaattttcttaaacacaacattcat-gatctatgagccataacattgatatgcatga 365  Q
    |||| |||| |||||  ||||||| ||||||||||||||| ||  |||||||||||||||| |||||||||| ||||||||||||||||||||    
T  32584495 caagttgcgctgctaggcctttttggatggtaaaatcaatctttgtaaacacaacattcatcgatctatgagacataacattgatatgcatga 32584587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 598 - 758
Target Start/End: Complemental strand, 33235679 - 33235519
Alignment:
Q  598 atgtttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagt 697  Q
    |||||||||| ||||||||| | |||||| | || ||| | ||||| | ||  ||||||| || | | | |||||||||||| | ||||  |||||||||    
T  33235679 atgtttgatcattttagtttcacagaattcctaaattatttctttacgttttgaaagttttaatttggtccttttagtttgacaaaattatcaagttagt 33235580  T
Q  698 tttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
      |||||||||| |||  || ||||||||| ||||||||||||||||||||||||||||||    
T  33235579 cctttaagtttcaaaaacttcaaataggtcattttagttgataaactatttcactgttacc 33235519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 652 - 751
Target Start/End: Complemental strand, 4187763 - 4187664
Alignment:
Q  652 aagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcac 751  Q
    |||||| || ||||| |||||| ||||| ||||||  |||||||||  ||||| |||  ||||||||||||||||| |||||||||||||||||||||||    
T  4187763 aagttttaattagatccttttaatttgacagaattttcaagttagtcctttaaattttaaaagttttaaataggtcattttagttgataaactatttcac 4187664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 666 - 736
Target Start/End: Original strand, 31893255 - 31893325
Alignment:
Q  666 ttcttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagtt 736  Q
    |||||||||||||| ||||||| ||||||||||||||||||||| ||||||| || |||||| ||||||||    
T  31893255 ttcttttagtttgacagaattctcaagttagttttttaagtttcgaaagtttcaattaggtcattttagtt 31893325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 608 - 758
Target Start/End: Original strand, 42990507 - 42990657
Alignment:
Q  608 cttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagtt 707  Q
    ||||||||| || |||||||  || ||||||||||||| ||  ||||||| || ||| |  |||||||| || ||||||  ||||||| |||||||||||    
T  42990507 cttttagttggaaagaatttttaaattagtcctttaagttttgaaagttttaattaggtcattttagttcgacagaattttcaagttaattttttaagtt 42990606  T
Q  708 tctaaagttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
    |  |||||||||| || ||| |||||||||||| ||||||| || ||||||    
T  42990607 ttaaaagttttaattatgtcattttagttgatacactattttaccgttacc 42990657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 601 - 738
Target Start/End: Complemental strand, 5805717 - 5805581
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| |||||||||||||| | |||||  ||||||||| |||||| ||  |||||||||| ||  | ||||||||||||  |||||  ||||||| | ||    
T  5805717 tttggtccttttagtttgacaaaatttt-aagttagtcatttaagttttgaaagtttcaattatgtccttttagtttgactgaattttcaagttaatctt 5805619  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttga 738  Q
    ||||||||| ||||||| ||||||||| ||||||||||    
T  5805618 ttaagtttcaaaagtttcaaataggtcattttagttga 5805581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 609 - 736
Target Start/End: Original strand, 19925113 - 19925239
Alignment:
Q  609 ttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagttt 708  Q
    ||||||||||| ||||||||||||||| ||||| ||| ||| |||||||||| ||||| |||||||||||| | ||||  ||| |||||  |||||||||    
T  19925113 ttttagtttgacagaatttccaagttactccttcaagtttcgaaagtttcaattagatccttttagtttgacacaatttccaa-ttagtcctttaagttt 19925211  T
Q  709 ctaaagttttaaataggtctttttagtt 736  Q
    | ||| | | ||||||| | ||||||||    
T  19925212 caaaaatatcaaataggaccttttagtt 19925239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 690 - 757
Target Start/End: Complemental strand, 27995615 - 27995548
Alignment:
Q  690 aagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttac 757  Q
    ||||||||  |||||||||| |||||||||||||| || ||||||||||||||||||||||| |||||    
T  27995615 aagttagtcctttaagtttcaaaagttttaaatagatccttttagttgataaactatttcaccgttac 27995548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 608 - 751
Target Start/End: Original strand, 31893257 - 31893391
Alignment:
Q  608 cttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagtt 707  Q
    |||||||||||| ||||||  |||||||||  |||||| ||| |||||||||| ||| |  ||||||||||| |||||||  |||||||| |||||||||    
T  31893257 cttttagtttgacagaattctcaagttagttttttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcctaagttagtcttttaagtt 31893356  T
Q  708 tctaaagttttaaataggtctttttagttgataaactatttcac 751  Q
    ||         ||||||||| ||||||| |||||||||||||||    
T  31893357 tc---------aaataggtcattttagtcgataaactatttcac 31893391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 702 - 764
Target Start/End: Original strand, 8039747 - 8039809
Alignment:
Q  702 taagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgct 764  Q
    |||||||| ||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||    
T  8039747 taagtttcaaaagtttcaaataggtccttttagttgataaactatttcaccgttacccctgct 8039809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 601 - 751
Target Start/End: Complemental strand, 21413233 - 21413084
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| ||||||||||| || |||||| |||| |||||  ||| || ||| ||| |||||| |||   |||||| ||||| ||||||   |||||||||||    
T  21413233 tttggtccttttagttcgacagaattcccaaattagttattttagtttcgaaaatttcaattaggcccttttaatttgacagaatttctaagttagtttt 21413134  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcac 751  Q
    | ||||||| ||||||| ||||||||| |||||||| |||||||| |||||    
T  21413133 t-aagtttcaaaagtttcaaataggtccttttagttcataaactacttcac 21413084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 609 - 679
Target Start/End: Complemental strand, 34951578 - 34951508
Alignment:
Q  609 ttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttga 679  Q
    ||||||||||| ||||||  ||||||||||||||||| ||| |||||||||| ||||| ||||||||||||    
T  34951578 ttttagtttgacagaattatcaagttagtcctttaagtttcgaaagtttcaattagatccttttagtttga 34951508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 611 - 733
Target Start/End: Complemental strand, 29591171 - 29591047
Alignment:
Q  611 ttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttt--tttaagttt 708  Q
    ||||||||||| ||||  ||||||||||||||||| ||||||||||| || ||| |  ||||||||||| | ||| |||||||||   |  |||||||||    
T  29591171 ttagtttgatataattatcaagttagtcctttaagtttcaaaagttttaattaggtcattttagtttgacaaaatccgcaagttataatcctttaagttt 29591072  T
Q  709 ctaaagttttaaataggtcttttta 733  Q
    | ||||||||||||| ||| |||||    
T  29591071 caaaagttttaaataagtcatttta 29591047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 606 - 687
Target Start/End: Original strand, 40904756 - 40904837
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattc 687  Q
    |||||||||||||| | ||||| ||| |||||| |||||| || ||||||||||||||||| |||||| ||||| |||||||    
T  40904756 tccttttagtttgacataattttcaaattagtcatttaagttttaaaagtttcaaatagatccttttaatttgacagaattc 40904837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 601 - 661
Target Start/End: Original strand, 1441006 - 1441066
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaa 661  Q
    ||||||||||||||||||| |||||| ||||||||||  |||||| |||||||||||||||    
T  1441006 tttgatccttttagtttgacagaattcccaagttagtattttaagtttcaaaagtttcaaa 1441066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 608 - 676
Target Start/End: Original strand, 10619867 - 10619935
Alignment:
Q  608 cttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtt 676  Q
    |||||||||||| | ||||  ||||||||||||||||| |||||||||||||||||| | |||||||||    
T  10619867 cttttagtttgacacaattgtcaagttagtcctttaagtttcaaaagtttcaaataggtccttttagtt 10619935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 604 - 708
Target Start/End: Original strand, 19925168 - 19925271
Alignment:
Q  604 gatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttttta 703  Q
    |||||||||||||||| | ||||||||| ||||||||||||| ||||||| | ||||||||   |||||||||| | ||||||  |||||||||  ||||    
T  19925168 gatccttttagtttgacacaatttccaa-ttagtcctttaagtttcaaaaatatcaaataggaccttttagtttaacagaatttccaagttagtccttta 19925266  T
Q  704 agttt 708  Q
    |||||    
T  19925267 agttt 19925271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 601 - 709
Target Start/End: Complemental strand, 41020247 - 41020140
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    ||||||||||||||||||| | |||||||||||||||  |||||| ||  ||||||| || ||||| |||||||||||| ||||||   |||||| || |    
T  41020247 tttgatccttttagtttgacataatttccaagttagt-ttttaagttttgaaagttttaattagatccttttagtttgacagaatttctaagttaattct 41020149  T
Q  701 ttaagtttc 709  Q
    |||||||||    
T  41020148 ttaagtttc 41020140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 668 - 758
Target Start/End: Original strand, 1441013 - 1441114
Alignment:
Q  668 cttttagtttgatagaattcgcaagttagttttttaagtttc--------taaagttttaaataggtctttttagtt---gataaactatttcactgtta 756  Q
    |||||||||||| ||||||| ||||||||| |||||||||||         ||||||||||||||||| ||||||||   ||||||||||||||||||||    
T  1441013 cttttagtttgacagaattcccaagttagtattttaagtttcaaaagtttcaaagttttaaataggtcattttagttggggataaactatttcactgtta 1441112  T
Q  757 cc 758  Q
    ||    
T  1441113 cc 1441114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 604 - 709
Target Start/End: Complemental strand, 34951523 - 34951418
Alignment:
Q  604 gatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttttta 703  Q
    |||||||||||||||| | |||||| || | ||||||||||| ||||||||| | |||||    |||||||||||| | ||||| |||||||||  ||||    
T  34951523 gatccttttagtttgacacaatttctaaatcagtcctttaagtttcaaaagtataaaatatgaccttttagtttgacacaattctcaagttagtcattta 34951424  T
Q  704 agtttc 709  Q
    ||||||    
T  34951423 agtttc 34951418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 600 - 736
Target Start/End: Original strand, 36566277 - 36566413
Alignment:
Q  600 gtttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgc-aagttagtt 698  Q
    ||||| |||||||||||||| ||||||   ||||||||| |||||| ||  |||||||||| ||| |  ||||||||||| ||||||| | ||||||| |    
T  36566277 gtttggtccttttagtttgacagaattcttaagttagtcatttaagttttgaaagtttcaattaggtcattttagtttgacagaattctcaaagttag-t 36566375  T
Q  699 ttttaagtttctaaagttttaaataggtctttttagtt 736  Q
     |||||||||| ||| ||| ||||| ||| ||||||||    
T  36566376 ctttaagtttcaaaattttcaaataagtcattttagtt 36566413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 291 - 363
Target Start/End: Complemental strand, 45003092 - 45003019
Alignment:
Q  291 cctttttagatggtaaaatcaattttcttaaacacaacattcatgat-ctatgagccataacattgatatgcat 363  Q
    ||||||| ||||| ||||||||| ||| ||||||||||||||||| | ||||||| |||||||||| |||||||    
T  45003092 cctttttggatggcaaaatcaatcttcgtaaacacaacattcatggtcctatgagacataacattgctatgcat 45003019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 668 - 736
Target Start/End: Original strand, 8039670 - 8039738
Alignment:
Q  668 cttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagtt 736  Q
    |||||||||||| | ||||| |||||||||| |||||||||| ||||||| || |||||| ||||||||    
T  8039670 cttttagtttgacataattctcaagttagttctttaagtttcgaaagtttcaattaggtccttttagtt 8039738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 601 - 709
Target Start/End: Complemental strand, 22876977 - 22876870
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    ||||||||||||||||||| | ||||||||||||| |  |||||| ||| |||||||||| ||  |  ||||||||||| ||||||| ||||||| |  |    
T  22876977 tttgatccttttagtttgacataatttccaagttaat-ttttaagtttcgaaagtttcaattaagtcattttagtttgacagaattctcaagttaatcct 22876879  T
Q  701 ttaagtttc 709  Q
    |||||||||    
T  22876878 ttaagtttc 22876870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 608 - 676
Target Start/End: Complemental strand, 23679587 - 23679520
Alignment:
Q  608 cttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtt 676  Q
    |||||||||||| ||||||  |||||||||| |||||| ||||||||||| ||||||||| ||||||||    
T  23679587 cttttagtttgacagaattctcaagttagtc-tttaagtttcaaaagtttaaaatagattattttagtt 23679520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 698 - 758
Target Start/End: Original strand, 29590709 - 29590769
Alignment:
Q  698 tttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
    |||||||||||| ||||||||||||| ||| ||||||||| ||| ||||||||| ||||||    
T  29590709 tttttaagtttcaaaagttttaaatatgtcattttagttggtaagctatttcaccgttacc 29590769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 601 - 733
Target Start/End: Original strand, 40904691 - 40904823
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| ||||||| |||||| | ||||  |||||||||| |||||| || ||||||||||| ||| | |||||||||||| | ||||  ||| |||||  |    
T  40904691 tttggtccttttggtttgacataattctcaagttagtcttttaagttttaaaagtttcaattaggtccttttagtttgacataattttcaaattagtcat 40904790  T
Q  701 ttaagtttctaaagttttaaataggtcttttta 733  Q
    ||||||||  ||||||| |||||| || |||||    
T  40904791 ttaagttttaaaagtttcaaatagatcctttta 40904823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 715 - 751
Target Start/End: Complemental strand, 42991028 - 42990992
Alignment:
Q  715 ttttaaataggtctttttagttgataaactatttcac 751  Q
    |||||||||||||||||||||||||||||||||||||    
T  42991028 ttttaaataggtctttttagttgataaactatttcac 42990992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 606 - 685
Target Start/End: Original strand, 8039668 - 8039747
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaat 685  Q
    |||||||||||||| | ||||  ||||||||| ||||||| ||| |||||||||| ||| | |||||||||||| |||||    
T  8039668 tccttttagtttgacataattctcaagttagttctttaagtttcgaaagtttcaattaggtccttttagtttgaaagaat 8039747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 630 - 676
Target Start/End: Complemental strand, 27995615 - 27995569
Alignment:
Q  630 aagttagtcctttaagattcaaaagtttcaaatagattcttttagtt 676  Q
    |||||||||||||||| ||||||||||| |||||||| |||||||||    
T  27995615 aagttagtcctttaagtttcaaaagttttaaatagatccttttagtt 27995569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 671 - 736
Target Start/End: Complemental strand, 29591171 - 29591106
Alignment:
Q  671 ttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagtt 736  Q
    ||||||||||| ||||  |||||||||  |||||||||| |||||||||| |||||| ||||||||    
T  29591171 ttagtttgatataattatcaagttagtcctttaagtttcaaaagttttaattaggtcattttagtt 29591106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 609 - 717
Target Start/End: Original strand, 36566346 - 36566454
Alignment:
Q  609 ttttagtttgatagaatt-tccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagtt 707  Q
    ||||||||||| |||||| || ||||||||| |||||| ||||||| |||||||||  |  ||||||||||| | ||||| |||||||||  ||||| ||    
T  36566346 ttttagtttgacagaattctcaaagttagtc-tttaagtttcaaaattttcaaataagtcattttagtttgacaaaattctcaagttagtcctttaaatt 36566444  T
Q  708 tctaaagttt 717  Q
    || |||||||    
T  36566445 tcaaaagttt 36566454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 664
Target Start/End: Complemental strand, 4187751 - 4187691
Alignment:
Q  604 gatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatag 664  Q
    |||||||||| ||||| ||||||| ||||||||||||||||  || |||||||| ||||||    
T  4187751 gatccttttaatttgacagaattttcaagttagtcctttaaattttaaaagttttaaatag 4187691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 668 - 736
Target Start/End: Complemental strand, 28257054 - 28256986
Alignment:
Q  668 cttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagtt 736  Q
    |||||||||||||| |||||  |||||||||||||||||||  ||| ||| || |||||| ||||||||    
T  28257054 cttttagtttgatataattctaaagttagttttttaagttttgaaaatttcaattaggtcattttagtt 28256986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 598 - 697
Target Start/End: Original strand, 5075345 - 5075443
Alignment:
Q  598 atgtttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagt 697  Q
    ||||||||| |||||||||||| |||  |  ||||||||||||||||| || ||||||||| ||| || || |||  ||||| ||||||| |||||||||    
T  5075345 atgtttgattcttttagtttgacagatctctcaagttagtcctttaagttttaaaagtttc-aattgagtccttttatttgacagaattctcaagttagt 5075443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 661
Target Start/End: Original strand, 33235099 - 33235154
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaa 661  Q
    ||||||| |||||| |||||| ||||||||| |||||||  |||||||||||||||    
T  33235099 tccttttggtttgacagaattcccaagttagacctttaaatttcaaaagtttcaaa 33235154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 712 - 751
Target Start/End: Complemental strand, 36566535 - 36566496
Alignment:
Q  712 aagttttaaataggtctttttagttgataaactatttcac 751  Q
    |||||| ||||| |||||||||||||||||||||||||||    
T  36566535 aagtttcaaatatgtctttttagttgataaactatttcac 36566496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 601 - 652
Target Start/End: Complemental strand, 36566577 - 36566526
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaa 652  Q
    |||| ||| |||||||||| |||||||||||||||||| |||||| ||||||    
T  36566577 tttggtccctttagtttgacagaatttccaagttagtcttttaagtttcaaa 36566526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 712 - 751
Target Start/End: Original strand, 39958789 - 39958828
Alignment:
Q  712 aagttttaaataggtctttttagttgataaactatttcac 751  Q
    |||||| ||||||||| |||||||||||||||||||||||    
T  39958789 aagtttcaaataggtccttttagttgataaactatttcac 39958828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 293 - 425
Target Start/End: Original strand, 27521385 - 27521519
Alignment:
Q  293 tttttagatggtaaaatcaattttcttaaacacaacattcat-gatctatgagccataacattgatatgcatgaccctct-aactatatgtagaatatca 390  Q
    ||||| ||||| |||||||||  || |||||||||||||||| ||  || ||| ||| |||||| ||||||||||| | | |||| |||||||||  |||    
T  27521385 tttttcgatggcaaaatcaatcctcgtaaacacaacattcatagacttaggagacatgacattgttatgcatgaccttttgaactctatgtagaaggtca 27521484  T
Q  391 acagtttctaatgccaagaaaccaaaagtgtcaaa 425  Q
    |||   ||| |||| | ||||||||||||||||||    
T  27521485 acaacctctgatgctaggaaaccaaaagtgtcaaa 27521519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 606 - 652
Target Start/End: Complemental strand, 31893535 - 31893489
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaa 652  Q
    |||||||||||||| ||||||  ||||||||||||||||| ||||||    
T  31893535 tccttttagtttgacagaattctcaagttagtcctttaagtttcaaa 31893489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 667 - 736
Target Start/End: Complemental strand, 1349270 - 1349201
Alignment:
Q  667 tcttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagtt 736  Q
    ||||||||||||| | ||||   |||||||| ||||||||||| |||||||||||||  || ||||||||    
T  1349270 tcttttagtttgacataatttctaagttagtcttttaagtttcaaaagttttaaataaatcattttagtt 1349201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 608 - 661
Target Start/End: Original strand, 4187573 - 4187626
Alignment:
Q  608 cttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaa 661  Q
    ||||| |||||| | |||| |||||||||| ||||||| |||||||||||||||    
T  4187573 ctttttgtttgacataattcccaagttagttctttaagtttcaaaagtttcaaa 4187626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 607 - 652
Target Start/End: Complemental strand, 10620284 - 10620239
Alignment:
Q  607 ccttttagtttgatagaatttccaagttagtcctttaagattcaaa 652  Q
    ||||||||||| | ||||||||||||| ||||||||||| ||||||    
T  10620284 ccttttagtttaacagaatttccaagtaagtcctttaagtttcaaa 10620239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 291 - 367
Target Start/End: Complemental strand, 21327033 - 21326956
Alignment:
Q  291 cctttttagatggtaaaatcaattttcttaaacacaacattcat-gatctatgagccataacattgatatgcatgacc 367  Q
    ||||||| ||||| |||||||||  || | |||||||||||||| || ||| ||| |||||||||| |||||||||||    
T  21327033 cctttttggatggcaaaatcaatcctcgtgaacacaacattcatggacctaggagacataacattgctatgcatgacc 21326956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 33677579 - 33677538
Alignment:
Q  183 aaccaagtaattgagttcaagtggttaataagctctaccaaa 224  Q
    ||||||||||||| ||||||||||||||| ||||| ||||||    
T  33677579 aaccaagtaattgggttcaagtggttaatgagctccaccaaa 33677538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 293 - 369
Target Start/End: Complemental strand, 40726673 - 40726596
Alignment:
Q  293 tttttagatggtaaaatcaattttcttaaacacaacattcat-gatctatgagccataacattgatatgcatgaccct 369  Q
    ||||| ||||| |||||||||  || |||||||||||||||| |||||| ||| |||| ||||| ||||||| |||||    
T  40726673 tttttggatggcaaaatcaatcctcataaacacaacattcatggatctaggagacatagcattgttatgcataaccct 40726596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 5e-46; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 604 - 754
Target Start/End: Complemental strand, 26330068 - 26329918
Alignment:
Q  604 gatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttttta 703  Q
    |||||||||||||| | |||||| |||||||||||||||||| |||||||||||||||||| | |||||||||||| | ||||| |||||||||  ||||    
T  26330068 gatccttttagttttacagaattcccaagttagtcctttaagtttcaaaagtttcaaataggtccttttagtttgacataattcccaagttagtcattta 26329969  T
Q  704 agtttctaaagttttaaataggtctttttagttgataaactatttcactgt 754  Q
    |||||| ||||||| ||||||||| ||||||||||||||||||||||||||    
T  26329968 agtttcaaaagtttcaaataggtcattttagttgataaactatttcactgt 26329918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 605 - 764
Target Start/End: Original strand, 5387130 - 5387289
Alignment:
Q  605 atccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaa 704  Q
    |||||||||||||||  ||||||| |||||||||||||||| || ||||||||||| || ||  ||||||||||| ||||||| ||||||||   |||||    
T  5387130 atccttttagtttgactgaatttctaagttagtcctttaagttttaaaagtttcaattatatcattttagtttgacagaattcccaagttagccctttaa 5387229  T
Q  705 gtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgct 764  Q
    ||||| ||||||| |||||| |||||||||||||||||| ||||||| |||||| |||||    
T  5387230 gtttcaaaagtttcaaatagatctttttagttgataaacaatttcaccgttacccctgct 5387289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 609 - 780
Target Start/End: Original strand, 31229262 - 31229433
Alignment:
Q  609 ttttagtttgatagaatttccaagttagtccttt-aagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagtt 707  Q
    ||||| ||||| ||||||| ||| |||||||||| ||| ||| |||||||||  ||| |  ||||||||||||||||||| |||||||||  ||||||||    
T  31229262 ttttaatttgacagaattttcaaattagtccttttaagtttcgaaagtttcacttaggtctttttagtttgatagaattctcaagttagtcatttaagtt 31229361  T
Q  708 tctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgctagtcagtaaataatta 780  Q
    || ||||||| ||||||||  ||||||||||||||||||||||| |||||||||||| |||||| ||||||||    
T  31229362 tcaaaagtttcaaataggttcttttagttgataaactatttcaccgttacctctgct-gtcagttaataatta 31229433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 606 - 736
Target Start/End: Complemental strand, 26330126 - 26329996
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaag 705  Q
    |||||||||||||| ||||||  ||||||||||||||||| ||  |||||||||| ||||| |||||||||| | ||||||| |||||||||  ||||||    
T  26330126 tccttttagtttgacagaattctcaagttagtcctttaagttttgaaagtttcaattagatccttttagttttacagaattcccaagttagtcctttaag 26330027  T
Q  706 tttctaaagttttaaataggtctttttagtt 736  Q
    |||| ||||||| ||||||||| ||||||||    
T  26330026 tttcaaaagtttcaaataggtccttttagtt 26329996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 668 - 780
Target Start/End: Original strand, 52567750 - 52567861
Alignment:
Q  668 cttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgctagt 767  Q
    |||||||||||| |||||||  ||||||||  |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||  ||||| ||    
T  52567750 cttttagtttgacagaattcttaagttagtcatttaagtttcaaaagttttaaataggtcattttagttgataaactatttcactgttactcctgct-gt 52567848  T
Q  768 cagtaaataatta 780  Q
    |||| ||||||||    
T  52567849 cagttaataatta 52567861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 609 - 709
Target Start/End: Complemental strand, 2789031 - 2788931
Alignment:
Q  609 ttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagttt 708  Q
    ||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||| |  ||||||||||| ||||||| |||||||||  |||||||||    
T  2789031 ttttagtttgacagaattttcaagttagtcctttaagtttcaaaagtttcaaataggtcattttagtttgacagaattctcaagttagtcatttaagttt 2788932  T
Q  709 c 709  Q
    |    
T  2788931 c 2788931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 601 - 736
Target Start/End: Complemental strand, 43098536 - 43098401
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| |||||||||||||| |||||||| || ||||| ||||||| ||| |||||||||| ||| | |||||||||||| | ||||| |||||||||  |    
T  43098536 tttggtccttttagtttgacagaatttctaacttagttctttaagtttcgaaagtttcaattaggtccttttagtttgacaaaattcccaagttagtcct 43098437  T
Q  701 ttaagtttctaaagttttaaataggtctttttagtt 736  Q
    ||||||||| ||||||| ||||| ||| ||||||||    
T  43098436 ttaagtttcaaaagtttcaaatatgtcattttagtt 43098401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 601 - 764
Target Start/End: Original strand, 52181715 - 52181878
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    ||||||||||||||||||| | ||||  ||||||||| ||||||  ||  ||||||||||  |  | |||||||||||| ||||||| |||||||||  |    
T  52181715 tttgatccttttagtttgacaaaattctcaagttagttctttaaattttgaaagtttcaatcatgtccttttagtttgacagaattcccaagttagtcct 52181814  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgct 764  Q
    ||||||||| ||||||| ||| | ||| ||||| ||||||||||||||||| |||||| |||||    
T  52181815 ttaagtttcaaaagtttcaaacatgtcattttaattgataaactatttcaccgttaccgctgct 52181878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 609 - 751
Target Start/End: Complemental strand, 8408976 - 8408834
Alignment:
Q  609 ttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagttt 708  Q
    ||||||||||| | ||||  |||||||||| |||||| ||| ||| ||||||  |  |||||||||||||| ||||||  |||||||||  |||||||||    
T  8408976 ttttagtttgacataattctcaagttagtcatttaagtttcgaaaatttcaatgatgttcttttagtttgacagaattttcaagttagtcatttaagttt 8408877  T
Q  709 ctaaagttttaaataggtctttttagttgataaactatttcac 751  Q
    | ||||||| ||||||||| | |||||||||||||||||||||    
T  8408876 caaaagtttcaaataggtcatcttagttgataaactatttcac 8408834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 609 - 758
Target Start/End: Complemental strand, 52568311 - 52568163
Alignment:
Q  609 ttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagttt 708  Q
    ||||||||||| | || | |||| ||||| ||||||  |||||||||||||| ||| |  ||||||||||||||||||| ||||| |||  |||||||||    
T  52568311 ttttagtttgacataactcccaatttagtactttaaatttcaaaagtttcaattaggtcattttagtttgatagaattctcaagtcagtcctttaagttt 52568212  T
Q  709 ctaaagttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
    | ||||||| |||||| ||  |||||||||||||||||||||| ||||||    
T  52568211 caaaagtttcaaatagatc-ctttagttgataaactatttcaccgttacc 52568163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 600 - 756
Target Start/End: Original strand, 8408350 - 8408497
Alignment:
Q  600 gtttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttt 699  Q
    ||||| |||||||||||||| | ||||||||||||||| |||||||         |||||||||||| |||||||||||| | ||||| ||||| ||| |    
T  8408350 gtttggtccttttagtttgacaaaatttccaagttagttctttaag---------tttcaaatagatccttttagtttgacaaaattctcaagtaagtct 8408440  T
Q  700 tttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgtta 756  Q
    |||||||||  ||||||| ||||| ||| ||||||||||||| ||||||||| ||||    
T  8408441 tttaagtttgaaaagtttcaaataagtcattttagttgataagctatttcaccgtta 8408497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 601 - 662
Target Start/End: Original strand, 2508262 - 2508323
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaat 662  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  2508262 tttgatccttttagtttgacagaatttccaagttagtcctttaagcttcaaaagtttcaaat 2508323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 606 - 709
Target Start/End: Complemental strand, 43098471 - 43098368
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaag 705  Q
    |||||||||||||| | |||| |||||||||||||||||| |||||||||||||||||  |  ||||||||| | ||||||| |||||||||  ||||||    
T  43098471 tccttttagtttgacaaaattcccaagttagtcctttaagtttcaaaagtttcaaatatgtcattttagtttaacagaattcccaagttagtcctttaag 43098372  T
Q  706 tttc 709  Q
    ||||    
T  43098371 tttc 43098368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 600 - 758
Target Start/End: Original strand, 19631762 - 19631915
Alignment:
Q  600 gtttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttt 699  Q
    ||||| |||||||| ||||| | ||||  ||||||||||||||||| ||| |||||||||| ||| | |||||||||||| ||||||| ||||||| ||     
T  19631762 gtttggtccttttattttgacaaaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaattctcaagttaatt- 19631860  T
Q  700 tttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
        |||   | |||||| ||||||||| |||||||||||||||||||| || ||||||    
T  19631861 ----agtcctttaagtttcaaataggtcattttagttgataaactattttaccgttacc 19631915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 668 - 758
Target Start/End: Complemental strand, 19632302 - 19632213
Alignment:
Q  668 cttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
    |||||||||||| ||||||| ||| ||||| ||| ||||||| ||||||||||||| ||| ||||||||||||||||| ||||||||||||    
T  19632302 cttttagtttgacagaattctcaaattagtcttt-aagtttcaaaagttttaaatatgtcattttagttgataaactacttcactgttacc 19632213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 601 - 751
Target Start/End: Original strand, 43098182 - 43098328
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| |||||||||||||| | |||||| |||||||||||||||| ||  |||||||||| ||| | ||||||||||   ||| |||  |||||||        
T  43098182 tttggtccttttagtttgacaaaatttctaagttagtcctttaagttttgaaagtttcaattaggtccttttagtttaccagagttccgaagttag---- 43098277  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcac 751  Q
    | ||||||| ||||||| ||||| ||| |||||||||||||||||||||||    
T  43098278 tcaagtttcaaaagtttcaaataagtccttttagttgataaactatttcac 43098328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 700 - 765
Target Start/End: Original strand, 44915937 - 44916002
Alignment:
Q  700 tttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgcta 765  Q
    |||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||    
T  44915937 tttaagtttcaaaagttttaaaaaggtctttttagttgataaattatttcactgttacccctgcta 44916002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 605 - 697
Target Start/End: Original strand, 2788794 - 2788886
Alignment:
Q  605 atccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagt 697  Q
    ||||||||||||||||  ||||  ||||||||||||||||| ||| |||||||||| ||| | |||||||||||| ||||||| |||||||||    
T  2788794 atccttttagtttgatgaaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaattctcaagttagt 2788886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 606 - 686
Target Start/End: Original strand, 41735817 - 41735897
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaatt 686  Q
    |||||||||||| | | |||| |||||||||||||||||| |||||||||||||||||| | |||||||||||| ||||||    
T  41735817 tccttttagtttaacataattcccaagttagtcctttaagtttcaaaagtttcaaataggtccttttagtttgacagaatt 41735897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 609 - 736
Target Start/End: Complemental strand, 22025417 - 22025291
Alignment:
Q  609 ttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagttt 708  Q
    ||||||||||| | ||||  ||||||||||||| ||| ||| |||||||||| ||| |||||||||||||| ||||||| |||||||||  |||||| ||    
T  22025417 ttttagtttgacataattatcaagttagtccttgaagtttcgaaagtttcaattaggttcttttagtttgacagaattcccaagttagtcctttaag-tt 22025319  T
Q  709 ctaaagttttaaataggtctttttagtt 736  Q
    | || |||| ||||||||  ||||||||    
T  22025318 caaaggtttcaaataggtaattttagtt 22025291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 608 - 693
Target Start/End: Complemental strand, 22025358 - 22025274
Alignment:
Q  608 cttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagt 693  Q
    |||||||||||| |||||| |||||||||||||||||| |||||| ||||||||||| |  ||||||||||| ||||||| |||||    
T  22025358 cttttagtttgacagaattcccaagttagtcctttaag-ttcaaaggtttcaaataggtaattttagtttgacagaattctcaagt 22025274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 608 - 736
Target Start/End: Complemental strand, 2789092 - 2788964
Alignment:
Q  608 cttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagtt 707  Q
    |||||||||||| | |||||  || ||||||||||||| ||   ||||||||| ||| |  ||||||||||| ||||||  |||||||||  ||||||||    
T  2789092 cttttagtttgacaaaatttttaaattagtcctttaagttttggaagtttcaattaggtcattttagtttgacagaattttcaagttagtcctttaagtt 2788993  T
Q  708 tctaaagttttaaataggtctttttagtt 736  Q
    || ||||||| ||||||||| ||||||||    
T  2788992 tcaaaagtttcaaataggtcattttagtt 2788964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 606 - 661
Target Start/End: Original strand, 26329828 - 26329883
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaa 661  Q
    |||||||||||||| |||||||||||||||| |||||||| |||||||||||||||    
T  26329828 tccttttagtttgacagaatttccaagttagccctttaagtttcaaaagtttcaaa 26329883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 610 - 717
Target Start/End: Original strand, 35046437 - 35046544
Alignment:
Q  610 tttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagtttc 709  Q
    |||||||||| | ||||| ||| ||||||||||||| ||| ||||||| || ||||| |||||||||||| |||||||  || |||||  ||||||||||    
T  35046437 tttagtttgacataattttcaatttagtcctttaagtttcgaaagttttaattagatccttttagtttgacagaattcctaaattagtcctttaagtttc 35046536  T
Q  710 taaagttt 717  Q
     |||||||    
T  35046537 aaaagttt 35046544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 608 - 733
Target Start/End: Original strand, 9320017 - 9320142
Alignment:
Q  608 cttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagtt 707  Q
    |||||||||||| | ||||  |||||||||  |||||| ||| |||||||||| ||  |||||||||||||| ||||||| ||| |||||  ||||| ||    
T  9320017 cttttagtttgacaaaattctcaagttagttttttaagtttcgaaagtttcaattaagttcttttagtttgacagaattctcaatttagtcatttaaatt 9320116  T
Q  708 tctaaagttttaaataggtcttttta 733  Q
    || ||||||| |||||| || |||||    
T  9320117 tcaaaagtttcaaatagatcatttta 9320142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 608 - 664
Target Start/End: Complemental strand, 8408917 - 8408861
Alignment:
Q  608 cttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatag 664  Q
    |||||||||||| ||||||| |||||||||| |||||| ||||||||||||||||||    
T  8408917 cttttagtttgacagaattttcaagttagtcatttaagtttcaaaagtttcaaatag 8408861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 609 - 676
Target Start/End: Original strand, 22025121 - 22025188
Alignment:
Q  609 ttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtt 676  Q
    ||||||||||| ||||||   |||||||||| |||||||| ||||||||||||||| |||||||||||    
T  22025121 ttttagtttgacagaattcttaagttagtccgttaagattaaaaagtttcaaataggttcttttagtt 22025188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 608 - 686
Target Start/End: Complemental strand, 23085323 - 23085246
Alignment:
Q  608 cttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaatt 686  Q
    |||||||||||| |||| ||  ||||||||| |||||| |||||||||||||| |||| ||||||||||| ||||||||    
T  23085323 cttttagtttgacagaaattttaagttagtc-tttaagtttcaaaagtttcaattagaatcttttagttttatagaatt 23085246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 669 - 743
Target Start/End: Complemental strand, 42116124 - 42116050
Alignment:
Q  669 ttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaac 743  Q
    ||||||||||| | ||||   ||||||||  |||||||||| ||||||||||||||||||||||| |||||||||    
T  42116124 ttttagtttgacaaaatttttaagttagtcctttaagtttcaaaagttttaaataggtctttttaattgataaac 42116050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 600 - 758
Target Start/End: Complemental strand, 52183549 - 52183400
Alignment:
Q  600 gtttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttt 699  Q
    ||||| |||||||||||| | | ||||  ||||||||||||||||| ||| |||||||||| |||   |||||||||||| ||||||| ||||  |||      
T  52183549 gtttggtccttttagttttacaaaattctcaagttagtcctttaagtttcgaaagtttcaattaggcccttttagtttgacagaattcccaagccagtcc 52183450  T
Q  700 tttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
    ||||||||||         ||||| || |||| ||||||||||||||||||| ||||||    
T  52183449 tttaagtttc---------aaataagttttttaagttgataaactatttcaccgttacc 52183400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 608 - 697
Target Start/End: Original strand, 2909182 - 2909271
Alignment:
Q  608 cttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagt 697  Q
    |||||||||| | ||||||  ||||||||| ||||||| ||| ||||| |||| ||| |||||||||||| | ||||||| |||||||||    
T  2909182 cttttagtttcacagaattctcaagttagttctttaagtttcgaaagtgtcaattaggttcttttagttttacagaattctcaagttagt 2909271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 669 - 750
Target Start/End: Complemental strand, 35024036 - 35023955
Alignment:
Q  669 ttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttca 750  Q
    ||||||||| | | ||||| ||||||||| ||||||||||  |||||||| ||| | || ||||||||||||||||||||||    
T  35024036 ttttagttttacacaattctcaagttagtcttttaagttttaaaagtttttaattgatccttttagttgataaactatttca 35023955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 651 - 751
Target Start/End: Original strand, 22025103 - 22025203
Alignment:
Q  651 aaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttca 750  Q
    |||||||||| ||| |  ||||||||||| |||||||  ||||||||   ||||| ||  ||||||| ||||||||  ||||||||||||||||||||||    
T  22025103 aaagtttcaattaggtcattttagtttgacagaattcttaagttagtccgttaagattaaaaagtttcaaataggttcttttagttgataaactatttca 22025202  T
Q  751 c 751  Q
    |    
T  22025203 c 22025203  T

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Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 606 - 750
Target Start/End: Original strand, 52865961 - 52866096
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaag 705  Q
    |||||||||||||| ||||||  ||||||||||||||||| ||  ||||||| || ||  |||||||||||||| | ||| | |||  ||||  ||||||    
T  52865961 tccttttagtttgacagaattctcaagttagtcctttaagttttgaaagtttaaattatgttcttttagtttgacaaaatgctcaatctagtcctttaag 52866060  T
Q  706 tttctaaagttttaaataggtctttttagttgataaactatttca 750  Q
    ||||         ||||||||| ||||||||||||||||||||||    
T  52866061 tttc---------aaataggtcattttagttgataaactatttca 52866096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 666 - 717
Target Start/End: Original strand, 9320015 - 9320066
Alignment:
Q  666 ttcttttagtttgatagaattcgcaagttagttttttaagtttctaaagttt 717  Q
    |||||||||||||| | ||||| ||||||||||||||||||||| |||||||    
T  9320015 ttcttttagtttgacaaaattctcaagttagttttttaagtttcgaaagttt 9320066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 668 - 751
Target Start/End: Complemental strand, 36890704 - 36890621
Alignment:
Q  668 cttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcac 751  Q
    |||||||||||| ||||||   |||||| |  |||||||||  |||||||  |||||||| |||||||||||||||||||||||    
T  36890704 cttttagtttgacagaatttttaagttaatcatttaagttttaaaagtttataataggtcattttagttgataaactatttcac 36890621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 292 - 385
Target Start/End: Complemental strand, 50001120 - 50001025
Alignment:
Q  292 ctttttagatggtaaaatcaattttcttaaacacaacattcat-gatctatgagccataacattgatatgcatgaccctct-aactatatgtagaa 385  Q
    |||||| ||||| ||||||||| ||| ||||||||||||| || |||||| ||| |||||||||| ||||||| ||||| |  |||||||||||||    
T  50001120 ctttttggatggcaaaatcaatcttcgtaaacacaacatttatggatctaggagacataacattgctatgcataaccctttggactatatgtagaa 50001025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 598 - 653
Target Start/End: Complemental strand, 52866421 - 52866366
Alignment:
Q  598 atgtttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaa 653  Q
    ||||||| | |||||||||||| |||||| |||||||||||||||||| |||||||    
T  52866421 atgtttggttcttttagtttgacagaattcccaagttagtcctttaagtttcaaaa 52866366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 604 - 658
Target Start/End: Original strand, 35046491 - 35046545
Alignment:
Q  604 gatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttc 658  Q
    |||||||||||||||| |||||| | || ||||||||||||| ||||||||||||    
T  35046491 gatccttttagtttgacagaattcctaaattagtcctttaagtttcaaaagtttc 35046545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 712 - 758
Target Start/End: Complemental strand, 44916333 - 44916287
Alignment:
Q  712 aagttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
    |||||| ||||||||  ||||||||||||||||||||||||||||||    
T  44916333 aagtttcaaataggttattttagttgataaactatttcactgttacc 44916287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 14949710 - 14949665
Alignment:
Q  187 aagtaattgagttcaagtggttaataagctctaccaaaagacgaat 232  Q
    |||| |||||||||||||||||||| ||||||| ||||||||||||    
T  14949710 aagtgattgagttcaagtggttaatgagctctatcaaaagacgaat 14949665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 609 - 662
Target Start/End: Complemental strand, 35046603 - 35046550
Alignment:
Q  609 ttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaat 662  Q
    ||||||||||| | |||| |||||||||||||||||| ||||||||||| ||||    
T  35046603 ttttagtttgacataattcccaagttagtcctttaagtttcaaaagttttaaat 35046550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 683 - 756
Target Start/End: Original strand, 42115654 - 42115727
Alignment:
Q  683 aattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgtta 756  Q
    ||||| |||||||||  ||||||| || ||||||||||||| ||| |||||| | |||||||||||||| ||||    
T  42115654 aattctcaagttagtcctttaagtctcaaaagttttaaataagtccttttagataataaactatttcacggtta 42115727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 274 - 385
Target Start/End: Original strand, 53619481 - 53619594
Alignment:
Q  274 caagctgcgttgctaaccctttttagatggtaaaatcaattttcttaaacacaacattcat-gatctatgagccataacattgatatgcatgaccctcta 372  Q
    |||||||||  ||||  ||||||| ||||| |||| ||||| || |||||||||||||||| || ||| ||| |||||||||| ||||||| ||||| ||    
T  53619481 caagctgcgccgctagacctttttggatggcaaaaccaattctcgtaaacacaacattcatggacctaagagacataacattgttatgcataacccttta 53619580  T
Q  373 -actatatgtagaa 385  Q
     ||| |||||||||    
T  53619581 gactctatgtagaa 53619594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 700 - 756
Target Start/End: Complemental strand, 2508720 - 2508664
Alignment:
Q  700 tttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgtta 756  Q
    ||||| |||| ||||||||||||| ||| |||||||||||||| ||||||| |||||    
T  2508720 tttaaatttcaaaagttttaaatatgtccttttagttgataaattatttcagtgtta 2508664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 668 - 736
Target Start/End: Original strand, 2788797 - 2788865
Alignment:
Q  668 cttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagtt 736  Q
    |||||||||||||  ||||| |||||||||  |||||||||| ||||||| || |||||| ||||||||    
T  2788797 cttttagtttgatgaaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtt 2788865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 600 - 664
Target Start/End: Original strand, 52567742 - 52567806
Alignment:
Q  600 gtttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatag 664  Q
    ||||| |||||||||||||| ||||||   ||||||||| |||||| ||||||||||| ||||||    
T  52567742 gtttggtccttttagtttgacagaattcttaagttagtcatttaagtttcaaaagttttaaatag 52567806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 668 - 758
Target Start/End: Original strand, 2508269 - 2508357
Alignment:
Q  668 cttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
    |||||||||||| ||||||  |||||||||  |||||| ||| ||||||| ||||  ||| || |||||||||||| |||||| |||||||    
T  2508269 cttttagtttgacagaatttccaagttagtcctttaagcttcaaaagtttcaaat--gtcattctagttgataaaccatttcattgttacc 2508357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 601 - 644
Target Start/End: Complemental strand, 41736001 - 41735958
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaa 644  Q
    ||||||||||||||||||| |||||| |||||||||| ||||||    
T  41736001 tttgatccttttagtttgacagaattcccaagttagtactttaa 41735958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 609 - 664
Target Start/End: Complemental strand, 42116124 - 42116069
Alignment:
Q  609 ttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatag 664  Q
    ||||||||||| | |||||  |||||||||||||||| ||||||||||| ||||||    
T  42116124 ttttagtttgacaaaatttttaagttagtcctttaagtttcaaaagttttaaatag 42116069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 765
Target Start/End: Original strand, 19681307 - 19681353
Alignment:
Q  719 aaataggtctttttagttgataaactatttcactgttacctctgcta 765  Q
    ||||||||| |||||||||||||||||||||||  ||||| ||||||    
T  19681307 aaataggtcattttagttgataaactatttcaccattacccctgcta 19681353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 765
Target Start/End: Original strand, 30542730 - 30542784
Alignment:
Q  711 aaagttttaaataggtctttttagttgataaactatttcactgttacctctgcta 765  Q
    ||||||| ||| || || |||||||||||||||||||||| |||||| |||||||    
T  30542730 aaagtttcaaacagatccttttagttgataaactatttcattgttacatctgcta 30542784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 606 - 644
Target Start/End: Original strand, 41735877 - 41735915
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaa 644  Q
    |||||||||||||| ||||||||||||| ||||||||||    
T  41735877 tccttttagtttgacagaatttccaagtcagtcctttaa 41735915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 606 - 652
Target Start/End: Complemental strand, 44916370 - 44916324
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaa 652  Q
    |||||||||||||| | ||||| ||||||||||||||||| ||||||    
T  44916370 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 44916324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 667 - 736
Target Start/End: Original strand, 2909181 - 2909250
Alignment:
Q  667 tcttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagtt 736  Q
    ||||||||||| | ||||||| |||||||||| |||||||||| ||||| | || |||||  ||||||||    
T  2909181 tcttttagtttcacagaattctcaagttagttctttaagtttcgaaagtgtcaattaggttcttttagtt 2909250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 671 - 736
Target Start/End: Original strand, 19681203 - 19681268
Alignment:
Q  671 ttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagtt 736  Q
    |||||||||  |||||| ||||||||||||||||||||| ||| ||| || ||| || ||||||||    
T  19681203 ttagtttgaccgaattctcaagttagttttttaagtttcgaaattttcaattagatcattttagtt 19681268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 669 - 722
Target Start/End: Complemental strand, 35046603 - 35046550
Alignment:
Q  669 ttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaat 722  Q
    ||||||||||| | ||||| |||||||||  |||||||||| ||||||||||||    
T  35046603 ttttagtttgacataattcccaagttagtcctttaagtttcaaaagttttaaat 35046550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 7e-42; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 601 - 736
Target Start/End: Original strand, 18951303 - 18951438
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| |||||||||||||| |||||| |||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| |||||||||  |    
T  18951303 tttggtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagttttaaatagatccttttagtttgatagaattctcaagttagtcct 18951402  T
Q  701 ttaagtttctaaagttttaaataggtctttttagtt 736  Q
    ||||||||  ||||||||||||||||| ||||||||    
T  18951403 ttaagttttaaaagttttaaataggtcattttagtt 18951438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 609 - 758
Target Start/End: Original strand, 20728536 - 20728685
Alignment:
Q  609 ttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagttt 708  Q
    ||||||||||| ||||||||||||||||||||||||| ||| |||| ||||| ||| | |||||||||| | ||||||| |||||||||  |||||||||    
T  20728536 ttttagtttgacagaatttccaagttagtcctttaagtttcgaaagattcaattaggtccttttagtttaacagaattctcaagttagtcctttaagttt 20728635  T
Q  709 ctaaagttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
      ||||||| ||||| |||||||||||||| |||||||||||| ||||||    
T  20728636 taaaagtttcaaatatgtctttttagttgaaaaactatttcaccgttacc 20728685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 600 - 758
Target Start/End: Complemental strand, 36418525 - 36418367
Alignment:
Q  600 gtttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttt 699  Q
    ||||| || ||||||||||| | ||||  ||||||||||||||| | |||||||||||||| ||| | |||||||||||| | ||||  |||||||||      
T  36418525 gtttggtctttttagtttgacataattctcaagttagtcctttacgtttcaaaagtttcaattaggtccttttagtttgacataattttcaagttagtcc 36418426  T
Q  700 tttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
    |||||||||| ||||||| ||||||||| ||||||||||||||||||||||| ||||||    
T  36418425 tttaagtttcaaaagtttcaaataggtccttttagttgataaactatttcaccgttacc 36418367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 601 - 764
Target Start/End: Original strand, 18248958 - 18249121
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| ||||||||||||||||||||||  |||||| || |||| | ||  ||||||| || ||  | |||||||||| | ||||||| |||||||||  |    
T  18248958 tttggtccttttagtttgatagaatttttaagttaatcttttacgttttgaaagttttaactatgtccttttagtttaacagaattctcaagttagtcat 18249057  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgct 764  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||| |||||    
T  18249058 ttaagtttcaaaagttttaaataggtctttttagttgataaactatttcatcgttacccctgct 18249121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 598 - 749
Target Start/End: Original strand, 1722497 - 1722648
Alignment:
Q  598 atgtttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagt 697  Q
    ||||||| |||||||||||| | | ||||  ||||||||||||||||  ||||||||||| ||||||||||||||||||||| | ||||| ||||||| |    
T  1722497 atgtttggtccttttagtttaacaaaattcacaagttagtcctttaattttcaaaagttttaaatagattcttttagtttgacataattctcaagttaat 1722596  T
Q  698 tttttaagtttctaaagttttaaataggtctttttagttgataaactatttc 749  Q
      |||||||||| ||||||| ||||| ||| |||||||| ||||| ||||||    
T  1722597 cctttaagtttcaaaagtttcaaatatgtcattttagtttataaattatttc 1722648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 601 - 758
Target Start/End: Original strand, 19278705 - 19278861
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    ||||||||||||||||||| ||||||   |||||||||||||||  ||||||| ||| || ||| |||||||||||||| ||||||| |||||||  | |    
T  19278705 tttgatccttttagtttgacagaattcttaagttagtcctttaaatttcaaaatttt-aattagcttcttttagtttgacagaattctcaagttacctct 19278803  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
    ||||||||| | | ||| |||||  || ||||||||||||||||||||||||||||||    
T  19278804 ttaagtttcaataatttcaaataaatcattttagttgataaactatttcactgttacc 19278861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 668 - 758
Target Start/End: Original strand, 32459434 - 32459524
Alignment:
Q  668 cttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
    |||||||||||| | ||||| |||||||||  |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  32459434 cttttagtttgacaaaattcacaagttagtcatttaagtttcaaaagttttaaataggtcattttagttgataaactatttcactgttacc 32459524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 606 - 717
Target Start/End: Original strand, 6336148 - 6336259
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaag 705  Q
    |||||||||||||  ||||||||||||||||||||||||| ||||||||||| |||||| |  ||||||||||| ||||||  |||||||||  ||||||    
T  6336148 tccttttagtttggcagaatttccaagttagtcctttaagtttcaaaagttttaaataggtcattttagtttgaaagaatttccaagttagtcctttaag 6336247  T
Q  706 tttctaaagttt 717  Q
    |||| |||||||    
T  6336248 tttcaaaagttt 6336259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 601 - 764
Target Start/End: Original strand, 36417886 - 36418040
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    ||||||||||||||||| | ||||||  ||||||||||||||||  ||| |||||||||| ||| ||||||| |||||| | ||||| |||||||||  |    
T  36417886 tttgatccttttagtttaacagaattctcaagttagtcctttaaatttcgaaagtttcaattaggttcttttggtttgacataattctcaagttagtcct 36417985  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgct 764  Q
    |||||||||         ||||||||| |||||||||||||| ||||||||||||||| |||||    
T  36417986 ttaagtttc---------aaataggtccttttagttgataaattatttcactgttaccgctgct 36418040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 609 - 780
Target Start/End: Complemental strand, 13543718 - 13543548
Alignment:
Q  609 ttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagttt 708  Q
    ||||||||||| ||||||  ||| |||||  |||||  |||||||||||  || |||| |||||||||||  |||||||  |||||| |  ||||| |||    
T  13543718 ttttagtttgacagaattctcaaattagttttttaaatttcaaaagtttttaacagatccttttagtttggaagaattcttaagttaatcctttaaattt 13543619  T
Q  709 ctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgctagtcagtaaataatta 780  Q
    | ||||||| ||||||||  ||||| ||||||||||||||||||||||||| |||| |||||| ||||||||    
T  13543618 caaaagtttcaaataggttcttttacttgataaactatttcactgttacctatgct-gtcagttaataatta 13543548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 608 - 759
Target Start/End: Original strand, 26275511 - 26275653
Alignment:
Q  608 cttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagtt 707  Q
    |||||||||||| |||||||| |||||||| ||||||| ||||||||||||||||||||  |||||||||||  |||||| |||||||||  || |||||    
T  26275511 cttttagtttgacagaatttctaagttagttctttaagtttcaaaagtttcaaatagatcattttagtttgacggaattcccaagttagtcattcaagtt 26275610  T
Q  708 tctaaagttttaaataggtctttttagttgataaactatttcactgttacct 759  Q
    ||         ||||||||  |||||||||| ||||||||||| ||||||||    
T  26275611 tc---------aaataggttcttttagttgacaaactatttcattgttacct 26275653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 606 - 751
Target Start/End: Complemental strand, 5735099 - 5734955
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaag 705  Q
    ||||||||||||||| |||||  |||||||||| |||||  ||| ||| ||| || ||  | |||||||||| | ||||||| |||||||||  ||||||    
T  5735099 tccttttagtttgatcgaattctcaagttagtcatttaaatttcgaaaattttaattatgtccttttagtttaacagaattctcaagttagtcctttaag 5735000  T
Q  706 tttctaaagttttaaataggtctttttagttgataaactatttcac 751  Q
    || | ||||||| ||||||||| |||||||||||||||||||||||    
T  5734999 tt-caaaagtttcaaataggtcattttagttgataaactatttcac 5734955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 604 - 687
Target Start/End: Original strand, 18951366 - 18951449
Alignment:
Q  604 gatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattc 687  Q
    |||||||||||||||||||||||  ||||||||||||||||| || |||||||| |||||| |  |||||||||||||||||||    
T  18951366 gatccttttagtttgatagaattctcaagttagtcctttaagttttaaaagttttaaataggtcattttagtttgatagaattc 18951449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 600 - 751
Target Start/End: Complemental strand, 20729160 - 20729018
Alignment:
Q  600 gtttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttt 699  Q
    ||||| |||||||||||||||| ||||  ||||||||||||||||          ||| |||||||| |||||||||||| ||||||  |||||||||      
T  20729160 gtttggtccttttagtttgataaaattatcaagttagtcctttaaa---------ttttaaatagatccttttagtttgacagaattttcaagttagtcc 20729070  T
Q  700 tttaagtttctaaagttttaaataggtctttttagttgataaactatttcac 751  Q
    ||||| |||  ||||||| ||||||||| |||||||||||||||||||||||    
T  20729069 tttaaattttaaaagtttcaaataggtccttttagttgataaactatttcac 20729018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 609 - 736
Target Start/End: Original strand, 32660207 - 32660334
Alignment:
Q  609 ttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagttt 708  Q
    ||||||||| | | |||||| |||||| ||||||||| ||| |||||||||| ||  |||||||||||| | | ||||| |||||||||  |||||||||    
T  32660207 ttttagttttacataatttctaagttaatcctttaagtttcgaaagtttcaattatgttcttttagttttacaaaattctcaagttagtcctttaagttt 32660306  T
Q  709 ctaaagttttaaataggtctttttagtt 736  Q
    | ||||||| ||||||||| ||||||||    
T  32660307 caaaagtttcaaataggtcattttagtt 32660334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 608 - 717
Target Start/End: Original strand, 32660266 - 32660375
Alignment:
Q  608 cttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagtt 707  Q
    |||||||||| | | ||||  ||||||||||||||||| |||||||||||||||||| |  ||||||||||| |||||||  ||||||||  ||||||||    
T  32660266 cttttagttttacaaaattctcaagttagtcctttaagtttcaaaagtttcaaataggtcattttagtttgacagaattcctaagttagtcctttaagtt 32660365  T
Q  708 tctaaagttt 717  Q
    || |||||||    
T  32660366 tcaaaagttt 32660375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 601 - 751
Target Start/End: Original strand, 13543084 - 13543237
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagtta---gt 697  Q
    |||| |||||||||||||| | |||| | |||||| | ||||||| ||| |||||||||| ||| |  |||||||||||| |||||  |||||||   ||    
T  13543084 tttggtccttttagtttgacataattcctaagttaattctttaagtttcgaaagtttcaattaggtctttttagtttgatggaatttccaagttattagt 13543183  T
Q  698 tttttaagtttctaaagttttaaataggtctttttagttgataaactatttcac 751  Q
      |||||||||| ||||||| ||||| ||| |||||||||||||| ||||||||    
T  13543184 cctttaagtttcaaaagtttcaaatatgtcattttagttgataaattatttcac 13543237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 690 - 764
Target Start/End: Complemental strand, 1723010 - 1722936
Alignment:
Q  690 aagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgct 764  Q
    |||||||| ||||||||||  |||||||||||||  || |||||||||||||||||||||||||||||| |||||    
T  1723010 aagttagtgttttaagttttaaaagttttaaatatatcattttagttgataaactatttcactgttacccctgct 1722936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 601 - 663
Target Start/End: Complemental strand, 35891325 - 35891263
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaata 663  Q
    ||||||||||||||||||| | ||||| ||||||||||||||||| |||||||||||||||||    
T  35891325 tttgatccttttagtttgacataattttcaagttagtcctttaagtttcaaaagtttcaaata 35891263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 609 - 758
Target Start/End: Original strand, 30737748 - 30737897
Alignment:
Q  609 ttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagttt 708  Q
    ||||| ||||| ||||||  ||||||| || |||||  ||| |||||||||| ||  |  ||||||||||| | ||||| ||| ||||| ||||||||||    
T  30737748 ttttaatttgacagaattctcaagttaatcatttaaatttcgaaagtttcaattacgtctttttagtttgacataattctcaaattagtcttttaagttt 30737847  T
Q  709 ctaaagttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
    | ||||||||||||| ||| ||| |||||||||||| ||| || ||||||    
T  30737848 caaaagttttaaataagtcatttaagttgataaactgttttaccgttacc 30737897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 609 - 661
Target Start/End: Original strand, 6336211 - 6336263
Alignment:
Q  609 ttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaa 661  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  6336211 ttttagtttgaaagaatttccaagttagtcctttaagtttcaaaagtttcaaa 6336263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 689 - 757
Target Start/End: Complemental strand, 18238374 - 18238306
Alignment:
Q  689 caagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttac 757  Q
    |||||||||  |||||||||| ||||||||||||||||| |||||||||||||| |||||||| |||||    
T  18238374 caagttagtcgtttaagtttcaaaagttttaaataggtcattttagttgataaattatttcaccgttac 18238306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 640 - 751
Target Start/End: Complemental strand, 6336412 - 6336301
Alignment:
Q  640 tttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgat 739  Q
    |||||| ||| |||||||||| |||||||||||| ||||  |||||||  ||||||||  ||||| |||| || |||| ||||| ||| ||| |||||||    
T  6336412 tttaagtttcgaaagtttcaattagattcttttaatttgtcagaattcctaagttagtcctttaaatttcaaatgtttcaaatatgtcctttcagttgat 6336313  T
Q  740 aaactatttcac 751  Q
    ||||||||||||    
T  6336312 aaactatttcac 6336301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 606 - 758
Target Start/End: Complemental strand, 30738377 - 30738224
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaag 705  Q
    |||||||||||||| |||||||| ||||||||  |||||| ||| ||| ||| || ||| |  ||||| ||||| ||||||| |||||| ||  |||| |    
T  30738377 tccttttagtttgacagaatttcgaagttagtattttaagtttcgaaa-ttttaattaggtcattttaatttgacagaattctcaagtttgtcctttatg 30738279  T
Q  706 tttctaaagttttaaataggtctttttagt--tgataaactatttcactgttacc 758  Q
    |||| ||||||| ||||| ||| |||||||  |||||||||||||||| ||||||    
T  30738278 tttcaaaagtttcaaatatgtcattttagttgtgataaactatttcaccgttacc 30738224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 609 - 780
Target Start/End: Original strand, 35189922 - 35190082
Alignment:
Q  609 ttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagttt 708  Q
    ||||| ||||||||||||  |||||||||| |||||| ||| ||||||| |||||| |  ||||||||||| |||| || |||||||||  |||||||||    
T  35189922 ttttaatttgatagaattctcaagttagtc-tttaagtttcgaaagttttaaataggtcattttagtttgacagaactcccaagttagtcctttaagttt 35190020  T
Q  709 ctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgctagtcagtaaataatta 780  Q
    |         ||| || || |||||||||||||||||||||||||||||| ||| | |||||| ||||||||    
T  35190021 c---------aaaaagatcattttagttgataaactatttcactgttacccctg-ttgtcagttaataatta 35190082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 600 - 758
Target Start/End: Complemental strand, 35190537 - 35190389
Alignment:
Q  600 gtttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttt 699  Q
    ||||| |||||||| ||||| ||||||| ||||||| | ||||||| ||  |||||||||| ||| | |||||||||||| | ||||| ||| || || |    
T  35190537 gtttggtccttttaatttgacagaattttcaagttacttctttaagttttgaaagtttcaattaggtccttttagtttgacaaaattctcaaatttgtct 35190438  T
Q  700 tttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
    ||||||||||          ||| |||||||||||||||||||||||||||| ||||||    
T  35190437 tttaagtttc----------aattggtctttttagttgataaactatttcaccgttacc 35190389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 598 - 780
Target Start/End: Original strand, 5734460 - 5734640
Alignment:
Q  598 atgtttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagt 697  Q
    ||||||| |||||||| |||||  ||||||  |||||| | ||||||| ||  |||||||||| ||  |  ||||| ||||| |||||||  |||||| |    
T  5734460 atgtttggtccttttaatttgactgaatttttaagttacttctttaagttttgaaagtttcaattatgtcattttaatttgacagaattcctaagtta-t 5734558  T
Q  698 tttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgctagtcagtaaataatta 780  Q
      |||||||||  ||||||| ||||| ||| |||||||| |||||||||||||| |||||| ||||| |||||| ||||||||    
T  5734559 cctttaagttttaaaagtttcaaataagtcattttagttaataaactatttcaccgttacccctgct-gtcagttaataatta 5734640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 668 - 758
Target Start/End: Original strand, 18237919 - 18238009
Alignment:
Q  668 cttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
    |||||||||||| ||||||   |||||| |  |||||||||  ||||||||||||| ||| |||||||||||||| |||||||||||||||    
T  18237919 cttttagtttgacagaatttttaagttaatcctttaagttttaaaagttttaaataagtccttttagttgataaaatatttcactgttacc 18238009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 668 - 758
Target Start/End: Complemental strand, 32459912 - 32459822
Alignment:
Q  668 cttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
    ||||| ||||||  |||||| ||| ||||| ||||||||||  ||| ||| ||||||||| ||||||| ||||||||||||||||||||||    
T  32459912 cttttcgtttgaccgaattctcaaattagtcttttaagttttaaaaatttcaaataggtccttttagtcgataaactatttcactgttacc 32459822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 601 - 765
Target Start/End: Original strand, 13538469 - 13538628
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| |||||||||||||| | |||| | |||||||||||||| | ||| |||||||||| ||| |   |||||||||||||||||  |||||||         
T  13538469 tttggtccttttagtttgacataattcctaagttagtcctttacgtttcgaaagtttcaattaggtctgtttagtttgatagaattttcaagtta----- 13538563  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgcta 765  Q
    |||    | | |||||| ||||| ||| ||||||||||||||||||||||| |||||| ||||||    
T  13538564 ttagtccttttaagtttcaaatatgtcattttagttgataaactatttcaccgttacccctgcta 13538628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 601 - 697
Target Start/End: Original strand, 14235568 - 14235664
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagt 697  Q
    |||| |||||||||||||| | |||||  |||||||||||||||| |  |||||||| || ||| | |||||||||||| ||||||| |||||||||    
T  14235568 tttggtccttttagtttgaaataatttttaagttagtcctttaagttctaaaagttttaattaggtccttttagtttgacagaattctcaagttagt 14235664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 668 - 764
Target Start/End: Complemental strand, 35891318 - 35891222
Alignment:
Q  668 cttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgct 764  Q
    |||||||||||| | ||||  |||||||||  |||||||||| ||||||| ||||| || ||||| |||||||||||||||||  |||||| |||||    
T  35891318 cttttagtttgacataattttcaagttagtcctttaagtttcaaaagtttcaaataagttttttttgttgataaactatttcagcgttacccctgct 35891222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 601 - 652
Target Start/End: Complemental strand, 26276063 - 26276012
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaa 652  Q
    ||||||||||||||||||| | ||||||||||||||||||||||| ||||||    
T  26276063 tttgatccttttagtttgacaaaatttccaagttagtcctttaagtttcaaa 26276012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 668 - 736
Target Start/End: Original strand, 6336150 - 6336218
Alignment:
Q  668 cttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagtt 736  Q
    |||||||||||  ||||||  |||||||||  |||||||||| ||||||||||||||||| ||||||||    
T  6336150 cttttagtttggcagaatttccaagttagtcctttaagtttcaaaagttttaaataggtcattttagtt 6336218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 609 - 661
Target Start/End: Original strand, 32660327 - 32660379
Alignment:
Q  609 ttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaa 661  Q
    ||||||||||| |||||| | |||||||||||||||| |||||||||||||||    
T  32660327 ttttagtttgacagaattcctaagttagtcctttaagtttcaaaagtttcaaa 32660379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 601 - 664
Target Start/End: Complemental strand, 18238402 - 18238339
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatag 664  Q
    ||||||| ||| ||||||| | |||||||||||||||| |||||| ||||||||||| ||||||    
T  18238402 tttgatcttttaagtttgacaaaatttccaagttagtcgtttaagtttcaaaagttttaaatag 18238339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 715 - 758
Target Start/End: Original strand, 38082661 - 38082704
Alignment:
Q  715 ttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
    ||||||||||||| |||||||||||||||||||||||| |||||    
T  38082661 ttttaaataggtcattttagttgataaactatttcactattacc 38082704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 28094136 - 28094194
Alignment:
Q  186 caagtaattgagttcaagtggttaataagctctaccaaaagacgaattgtgtatgagaa 244  Q
    |||||||||| | ||||||||||||| ||||| |||||| ||||||||||||| |||||    
T  28094136 caagtaattgggctcaagtggttaatgagctccaccaaatgacgaattgtgtaggagaa 28094194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 673
Target Start/End: Complemental strand, 13543663 - 13543594
Alignment:
Q  604 gatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattctttta 673  Q
    |||||||||||||||  ||||||   |||||| ||||||||  |||||||||||||||||| ||||||||    
T  13543663 gatccttttagtttggaagaattcttaagttaatcctttaaatttcaaaagtttcaaataggttctttta 13543594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 606 - 663
Target Start/End: Original strand, 20728593 - 20728650
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaata 663  Q
    |||||||||||| | ||||||  ||||||||||||||||| || ||||||||||||||    
T  20728593 tccttttagtttaacagaattctcaagttagtcctttaagttttaaaagtttcaaata 20728650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 291 - 367
Target Start/End: Original strand, 23023507 - 23023584
Alignment:
Q  291 cctttttagatggtaaaatcaattttcttaaacacaacattcat-gatctatgagccataacattgatatgcatgacc 367  Q
    ||||||| ||||  ||||||||| ||| |||||||||||||||| || ||| ||| ||| ||||||||||||||||||    
T  23023507 cctttttggatgacaaaatcaatcttcgtaaacacaacattcatcgacctaggagacatgacattgatatgcatgacc 23023584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 274 - 362
Target Start/End: Original strand, 35310343 - 35310432
Alignment:
Q  274 caagctgcgttgctaaccctttttagatggtaaaatcaattttcttaaacacaacattcat-gatctatgagccataacattgatatgca 362  Q
    |||||||||| | ||| ||| ||| ||||| |||| ||||| || |||||||||||||||| || ||| ||| |||||||||||||||||    
T  35310343 caagctgcgtcgttaaacctctttggatggcaaaaccaattctcgtaaacacaacattcatggacctaggagacataacattgatatgca 35310432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 600 - 652
Target Start/End: Complemental strand, 31814007 - 31813955
Alignment:
Q  600 gtttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaa 652  Q
    ||||| |||||||||||||| |||||| ||||||||||| |||||| ||||||    
T  31814007 gtttggtccttttagtttgacagaattcccaagttagtcatttaagtttcaaa 31813955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 601 - 664
Target Start/End: Original strand, 32459427 - 32459490
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatag 664  Q
    |||| |||||||||||||| | ||||  |||||||||| |||||| ||||||||||| ||||||    
T  32459427 tttggtccttttagtttgacaaaattcacaagttagtcatttaagtttcaaaagttttaaatag 32459490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 712 - 751
Target Start/End: Complemental strand, 38405560 - 38405521
Alignment:
Q  712 aagttttaaataggtctttttagttgataaactatttcac 751  Q
    |||||||||||| ||| |||||||||||||||||||||||    
T  38405560 aagttttaaatatgtccttttagttgataaactatttcac 38405521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 601 - 660
Target Start/End: Complemental strand, 38405659 - 38405600
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaa 660  Q
    ||||||||||||||||| | |||||| |||||||| || |||||| ||| ||||||||||    
T  38405659 tttgatccttttagtttcacagaattcccaagttaatcatttaagtttcgaaagtttcaa 38405600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 291 - 367
Target Start/End: Complemental strand, 2566290 - 2566213
Alignment:
Q  291 cctttttagatggtaaaatcaattttcttaaacacaacattcat-gatctatgagccataacattgatatgcatgacc 367  Q
    ||||||| ||||| |||||||||  || ||||||||||||| || |||||| ||| ||| |||||| |||||||||||    
T  2566290 cctttttggatggcaaaatcaatcctcgtaaacacaacattgatggatctaggagacatgacattgctatgcatgacc 2566213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 668 - 717
Target Start/End: Complemental strand, 19279288 - 19279239
Alignment:
Q  668 cttttagtttgatagaattcgcaagttagttttttaagtttctaaagttt 717  Q
    |||||||||||| | |||||  |||||||||||||||||||| |||||||    
T  19279288 cttttagtttgacaaaattcttaagttagttttttaagtttcaaaagttt 19279239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 3e-41; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 606 - 748
Target Start/End: Original strand, 20575417 - 20575559
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaag 705  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||| | |||||||||||||||||||  |||||||||  ||||||    
T  20575417 tccttttagtttgatagaatttccaagttagtcctttaagtttcgaaagttttaaataggtccttttagtttgatagaatttccaagttagtcctttaag 20575516  T
Q  706 tttctaaagttttaaataggtctttttagttgataaactattt 748  Q
    |||  ||||||| ||||||||| ||| ||||||||||||||||    
T  20575517 ttttaaaagtttcaaataggtcatttcagttgataaactattt 20575559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 600 - 757
Target Start/End: Complemental strand, 11528170 - 11528013
Alignment:
Q  600 gtttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttt 699  Q
    ||||| |||||| |||||||  |||||| ||||||||||||||||| || |||||||||||||| ||||||||||||||| | || || ||| ||| |      
T  11528170 gtttggtcctttaagtttgaccgaattttcaagttagtcctttaagtttaaaaagtttcaaatatattcttttagtttgacataagtcccaacttaatcc 11528071  T
Q  700 tttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttac 757  Q
    |||||||||| ||||||| ||||| ||| |||||||||||||||||||||||||||||    
T  11528070 tttaagtttcaaaagtttcaaatatgtcattttagttgataaactatttcactgttac 11528013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 600 - 780
Target Start/End: Complemental strand, 10862713 - 10862533
Alignment:
Q  600 gtttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtt- 698  Q
    ||||| |||||||||||||| ||||||  ||||||||||||||||| ||  |||||||||| ||  |  ||||||||||| ||||||| | |||||||      
T  10862713 gtttggtccttttagtttgacagaattctcaagttagtcctttaagttttgaaagtttcaattaagtcattttagtttgaaagaattccccagttagtca 10862614  T
Q  699 ttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgctagtcagtaaataatta 780  Q
    |||||| |||| ||||||| ||||||||| ||||||||||||||||||||||| |||||| ||||| |||||| ||||||||    
T  10862613 ttttaaatttcaaaagtttcaaataggtccttttagttgataaactatttcaccgttacccctgct-gtcagttaataatta 10862533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 601 - 736
Target Start/End: Complemental strand, 16168815 - 16168680
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    ||||||| ||||||||||| ||||||||||| |||||| |||||| |||  ||||||||| ||| | |||||||||||| ||||||| ||||||||| |     
T  16168815 tttgatctttttagtttgacagaatttccaaattagtcatttaagtttcgcaagtttcaattaggtccttttagtttgacagaattctcaagttagtcta 16168716  T
Q  701 ttaagtttctaaagttttaaataggtctttttagtt 736  Q
    ||| ||||| ||||||| ||||||||||||||||||    
T  16168715 ttacgtttcaaaagtttcaaataggtctttttagtt 16168680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 601 - 751
Target Start/End: Complemental strand, 32417837 - 32417687
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    ||||||| ||||||||| | |||||| |||||||||| ||||||  ||| |||||||||| ||| | |||| ||||||| | ||||   ||||||||  |    
T  32417837 tttgatctttttagttttacagaattcccaagttagttctttaactttcgaaagtttcaattaggtcctttcagtttgacaaaatttctaagttagtcat 32417738  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcac 751  Q
    |||||||||  |||||| ||||||||| |||||||||||||||||||||||    
T  32417737 ttaagtttcagaagtttcaaataggtccttttagttgataaactatttcac 32417687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 601 - 751
Target Start/End: Complemental strand, 32423678 - 32423528
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    ||||||| ||||||||| | |||||| |||||||||| ||||||  ||| |||||||||| ||| | |||| ||||||| | ||||   ||||||||  |    
T  32423678 tttgatctttttagttttacagaattcccaagttagttctttaactttcgaaagtttcaattaggtcctttcagtttgacaaaatttctaagttagtcat 32423579  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcac 751  Q
    |||||||||  |||||| ||||||||| |||||||||||||||||||||||    
T  32423578 ttaagtttcagaagtttcaaataggtccttttagttgataaactatttcac 32423528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 601 - 754
Target Start/End: Complemental strand, 24139631 - 24139479
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||||||||||||||| || | ||||  ||| ||||||||||||| ||| ||||||| || ||  | |||||||||||||||||||  || ||||||  |    
T  24139631 tttgatccttttagtt-gacataattcacaaattagtcctttaagtttcgaaagttttaattaagtccttttagtttgatagaattatcaggttagtcct 24139533  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgt 754  Q
    ||||||||| ||| ||| ||||| |||||||||||||||||| |||||||||||    
T  24139532 ttaagtttcaaaaatttcaaataagtctttttagttgataaattatttcactgt 24139479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 601 - 764
Target Start/End: Original strand, 11527536 - 11527690
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| |||||||| ||||| | |||| | |||||||||||||||| ||| |||||||||| ||| | |||||||||||| | ||||| |||||||||  |    
T  11527536 tttggtccttttactttgacataattcctaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacaaaattcacaagttagtcct 11527635  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgct 764  Q
    |||||||||         ||||||||| ||||||||||||||||||||||| |||||| |||||    
T  11527636 ttaagtttc---------aaataggtcattttagttgataaactatttcaccgttacccctgct 11527690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 601 - 764
Target Start/End: Complemental strand, 17180263 - 17180100
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| |||||||||||| ||| |||||  || ||| ||||||||| ||| ||||||| || ||  | |||||||||||| | ||||  |||||||||  |    
T  17180263 tttggtccttttagttttatataatttttaaattaatcctttaagtttcgaaagttttaattatgtccttttagtttgacataattttcaagttagtcct 17180164  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgct 764  Q
    ||||||||  ||||||| |||||| || ||||||||||||||||||||||| |||||| |||||    
T  17180163 ttaagttttaaaagtttcaaatagatcattttagttgataaactatttcaccgttacccctgct 17180100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 601 - 736
Target Start/End: Original strand, 32417469 - 32417604
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| |||||||||||||| ||||||| ||||||||||||||||| ||| ||||||| || ||  |  ||||||||||| | ||||  |||||||||  |    
T  32417469 tttggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaaagttttaattatgtcattttagtttgacaaaattttcaagttagtcat 32417568  T
Q  701 ttaagtttctaaagttttaaataggtctttttagtt 736  Q
    ||||||||| ||||||||||||| ||| ||||||||    
T  32417569 ttaagtttcaaaagttttaaatatgtccttttagtt 32417604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 601 - 736
Target Start/End: Original strand, 32423310 - 32423445
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| |||||||||||||| ||||||| ||||||||||||||||| ||| ||||||| || ||  |  ||||||||||| | ||||  |||||||||  |    
T  32423310 tttggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaaagttttaattatgtcattttagtttgacaaaattttcaagttagtcat 32423409  T
Q  701 ttaagtttctaaagttttaaataggtctttttagtt 736  Q
    ||||||||| ||||||||||||| ||| ||||||||    
T  32423410 ttaagtttcaaaagttttaaatatgtccttttagtt 32423445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 601 - 758
Target Start/End: Original strand, 2839625 - 2839773
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| |||||||| ||||| ||||||  |||||||||| |||||| |||||||||||||| ||| | |||||| ||||| ||||||| |||||||||  |    
T  2839625 tttggtccttttaatttgaaagaattctcaagttagtcgtttaagtttcaaaagtttcaattaggtccttttaatttgacagaattctcaagttagtcct 2839724  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
    |||| ||||         |||||||| ||||||||||||||||||||||| |||||||    
T  2839725 ttaaatttc---------aaataggtttttttagttgataaactatttcattgttacc 2839773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 600 - 756
Target Start/End: Complemental strand, 2840177 - 2840030
Alignment:
Q  600 gtttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttt 699  Q
    ||||| |||||||||||| | | ||||  |||||||||| |||||| |||||||||||| ||||||| |||||||||| | ||||||| ||||||| |      
T  2840177 gtttggtccttttagtttaacataattctcaagttagtcatttaagtttcaaaagtttcgaatagatccttttagtttaacagaattctcaagttaatca 2840078  T
Q  700 tttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgtta 756  Q
    ||||||||||         ||||||||| ||||||||||||||||||||||| ||||    
T  2840077 tttaagtttc---------aaataggtcattttagttgataaactatttcaccgtta 2840030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 601 - 751
Target Start/End: Original strand, 16168465 - 16168606
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| |||||||||||||||||||||  || |||||||||||||| ||  |||||||||| ||| |  ||||||||||| ||||||  |||||||||  |    
T  16168465 tttggtccttttagtttgatagaattctcacgttagtcctttaagttttgaaagtttcaattaggtcattttagtttgacagaatttccaagttagtcct 16168564  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcac 751  Q
    |||||||||         ||||||||| |||||||||||||||||||||||    
T  16168565 ttaagtttc---------aaataggtccttttagttgataaactatttcac 16168606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 668 - 750
Target Start/End: Original strand, 9901966 - 9902048
Alignment:
Q  668 cttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttca 750  Q
    |||||||||||  ||||||  |||||||||  ||| |||||| ||||||||||||||||| ||||||||||||||||||||||    
T  9901966 cttttagtttgccagaatttccaagttagtgcttttagtttcaaaagttttaaataggtcattttagttgataaactatttca 9902048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 603 - 780
Target Start/End: Original strand, 10962740 - 10962916
Alignment:
Q  603 tgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttttt 702  Q
    ||||| ||||||||||| | |||| | |||||| ||  | ||| ||| |||||||||| ||||| |||||| ||| ||||||||   || |||||  |||    
T  10962740 tgatctttttagtttgacaaaattccaaagttattctgtaaagtttcgaaagtttcaattagatccttttattttaatagaatttctaaattagtccttt 10962839  T
Q  703 aagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgctagtcagtaaataatta 780  Q
    ||||||  ||||||| ||||| ||| |||||||||||||||||||| || ||||||  |||| |||||| ||||||||    
T  10962840 aagttttaaaagtttcaaatatgtcattttagttgataaactattttaccgttacccttgct-gtcagttaataatta 10962916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 698 - 758
Target Start/End: Original strand, 17131618 - 17131678
Alignment:
Q  698 tttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
    |||||||||||| ||||||||||||| ||| |||||||||||||| |||||||||||||||    
T  17131618 tttttaagtttcaaaagttttaaatatgtcattttagttgataaattatttcactgttacc 17131678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 606 - 662
Target Start/End: Complemental strand, 20575656 - 20575600
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaat 662  Q
    |||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||    
T  20575656 tccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtttcaaat 20575600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 609 - 721
Target Start/End: Original strand, 32417537 - 32417649
Alignment:
Q  609 ttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagttt 708  Q
    ||||||||||| | ||||| |||||||||| |||||| ||||||||||| |||||  | |||||||||||| ||||||  ||| |||||  |||||||||    
T  32417537 ttttagtttgacaaaattttcaagttagtcatttaagtttcaaaagttttaaatatgtccttttagtttgacagaatttccaaattagtcctttaagttt 32417636  T
Q  709 ctaaagttttaaa 721  Q
    | ||| |||||||    
T  32417637 caaaatttttaaa 32417649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 609 - 721
Target Start/End: Original strand, 32423378 - 32423490
Alignment:
Q  609 ttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagttt 708  Q
    ||||||||||| | ||||| |||||||||| |||||| ||||||||||| |||||  | |||||||||||| ||||||  ||| |||||  |||||||||    
T  32423378 ttttagtttgacaaaattttcaagttagtcatttaagtttcaaaagttttaaatatgtccttttagtttgacagaatttccaaattagtcctttaagttt 32423477  T
Q  709 ctaaagttttaaa 721  Q
    | ||| |||||||    
T  32423478 caaaatttttaaa 32423490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 606 - 709
Target Start/End: Complemental strand, 16168750 - 16168647
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaag 705  Q
    |||||||||||||| ||||||  ||||||||||  ||| | |||||||||||||||||| |  |||||||||||  ||| || ||||||||| |||||||    
T  16168750 tccttttagtttgacagaattctcaagttagtctattacgtttcaaaagtttcaaataggtctttttagtttgactgaaatcccaagttagtcttttaag 16168651  T
Q  706 tttc 709  Q
    ||||    
T  16168650 tttc 16168647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 668 - 761
Target Start/End: Complemental strand, 10407800 - 10407706
Alignment:
Q  668 cttttagtttgatagaattcgcaagttagttttttaagtttctaaa-gttttaaataggtctttttagttgataaactatttcactgttacctct 761  Q
    |||||||||| |  |||||| |||||||||  || |||||| |||| |||| ||||| ||| |||||||||||||||||||||||||||||||||    
T  10407800 cttttagtttaacggaattctcaagttagtcattcaagtttttaaaagtttcaaatatgtcattttagttgataaactatttcactgttacctct 10407706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 610 - 676
Target Start/End: Original strand, 17179693 - 17179759
Alignment:
Q  610 tttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtt 676  Q
    |||||||||||||||||| ||||||||||||||||  ||||||| |||||||||| | |||||||||    
T  17179693 tttagtttgatagaattttcaagttagtcctttaaatttcaaaaatttcaaataggtccttttagtt 17179759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 608 - 709
Target Start/End: Complemental strand, 9902382 - 9902281
Alignment:
Q  608 cttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagtt 707  Q
    |||||||||||| ||||||| |||||||||| |||||| ||| ||||||| || ||  | |||||||||||| | ||||| | |||||||| ||||||||    
T  9902382 cttttagtttgacagaattttcaagttagtcttttaagtttcgaaagttttaattatgtccttttagtttgacataattcccgagttagttctttaagtt 9902283  T
Q  708 tc 709  Q
    ||    
T  9902282 tc 9902281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 667 - 736
Target Start/End: Complemental strand, 20575764 - 20575696
Alignment:
Q  667 tcttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagtt 736  Q
    ||||||||||||| ||||||| ||||||||||||| ||||||| ||||||||||||| ||| ||||||||    
T  20575764 tcttttagtttgacagaattctcaagttagttttt-aagtttcgaaagttttaaataagtccttttagtt 20575696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 608 - 780
Target Start/End: Original strand, 17179631 - 17179802
Alignment:
Q  608 cttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagtt 707  Q
    |||||| ||||| ||||||  |||| ||| | |||||| ||| ||| ||| || ||| | | |||||||||||||||||  |||||||||  ||||| ||    
T  17179631 cttttattttgacagaattcacaaggtagccttttaagtttcgaaaattttaattaggtccctttagtttgatagaattttcaagttagtcctttaaatt 17179730  T
Q  708 tctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgctagtcagtaaataatta 780  Q
    || ||| ||| ||||||||| |||||||||||||   ||||||| |||||  ||||| |||||| ||||||||    
T  17179731 tcaaaaatttcaaataggtccttttagttgataagtcatttcaccgttactcctgct-gtcagttaataatta 17179802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 669 - 736
Target Start/End: Complemental strand, 10963229 - 10963162
Alignment:
Q  669 ttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagtt 736  Q
    ||||| |||||||||||   |||||||||||||||| |||| ||||||||||||||||| ||||||||    
T  10963229 ttttaatttgatagaatattcaagttagttttttaaatttcaaaagttttaaataggtcattttagtt 10963162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 666 - 736
Target Start/End: Complemental strand, 9902384 - 9902314
Alignment:
Q  666 ttcttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagtt 736  Q
    |||||||||||||| ||||||  ||||||||| ||||||||||| |||||||||| || ||| ||||||||    
T  9902384 ttcttttagtttgacagaattttcaagttagtcttttaagtttcgaaagttttaattatgtccttttagtt 9902314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 700 - 758
Target Start/End: Original strand, 10407348 - 10407406
Alignment:
Q  700 tttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
    |||||||||| ||||||| ||||| ||| |||||||||||||| |||||||||||||||    
T  10407348 tttaagtttcaaaagtttcaaatatgtcattttagttgataaattatttcactgttacc 10407406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 652 - 722
Target Start/End: Complemental strand, 20575670 - 20575600
Alignment:
Q  652 aagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaat 722  Q
    ||||||||||||| | |||||||||||| ||||||| |||||||||  |||||||||| ||||||| ||||    
T  20575670 aagtttcaaataggtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtttcaaat 20575600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 601 - 664
Target Start/End: Original strand, 9901959 - 9902022
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatag 664  Q
    |||| |||||||||||||  ||||||||||||||||| |||| || ||||||||||| ||||||    
T  9901959 tttggtccttttagtttgccagaatttccaagttagtgcttttagtttcaaaagttttaaatag 9902022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 606 - 653
Target Start/End: Original strand, 32417594 - 32417641
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaa 653  Q
    |||||||||||||| ||||||||||| ||||||||||||| |||||||    
T  32417594 tccttttagtttgacagaatttccaaattagtcctttaagtttcaaaa 32417641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 606 - 653
Target Start/End: Original strand, 32423435 - 32423482
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaa 653  Q
    |||||||||||||| ||||||||||| ||||||||||||| |||||||    
T  32423435 tccttttagtttgacagaatttccaaattagtcctttaagtttcaaaa 32423482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 284 - 369
Target Start/End: Complemental strand, 3137449 - 3137363
Alignment:
Q  284 tgctaaccctttttagatggtaaaatcaattttcttaaacacaacattcat-gatctatgagccataacattgatatgcatgaccct 369  Q
    |||||| ||||||| ||||| |||| ||||  || |||||||||||||||| || ||| ||| ||| |||||| |||||||||||||    
T  3137449 tgctaagcctttttggatggcaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctatgcatgaccct 3137363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 291 - 367
Target Start/End: Original strand, 959493 - 959570
Alignment:
Q  291 cctttttagatggtaaaatcaattttcttaaacacaacattcat-gatctatgagccataacattgatatgcatgacc 367  Q
    ||||||||||||  |||||||||  || |||||||||||||||| || ||| ||| || ||||||| |||||||||||    
T  959493 cctttttagatgacaaaatcaatcctcgtaaacacaacattcatggacctaggagacacaacattgctatgcatgacc 959570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 723 - 764
Target Start/End: Complemental strand, 9946716 - 9946675
Alignment:
Q  723 aggtctttttagttgataaactatttcactgttacctctgct 764  Q
    ||||| ||||||||||||||||||||||| |||||| |||||    
T  9946716 aggtccttttagttgataaactatttcaccgttacccctgct 9946675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 608 - 697
Target Start/End: Complemental strand, 20575763 - 20575675
Alignment:
Q  608 cttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagt 697  Q
    |||||||||||| ||||||  |||||||||  |||||| ||| ||||||| |||||  | |||||||||||| | ||||| |||||||||    
T  20575763 cttttagtttgacagaattctcaagttagtt-tttaagtttcgaaagttttaaataagtccttttagtttgacaaaattcccaagttagt 20575675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 291 - 367
Target Start/End: Original strand, 32115630 - 32115707
Alignment:
Q  291 cctttttagatggtaaaatcaattttcttaaacacaacattcat-gatctatgagccataacattgatatgcatgacc 367  Q
    ||||||||||| | |||||||||  || |||||||||||||||| || ||| ||| ||| |||||| |||||||||||    
T  32115630 cctttttagatagcaaaatcaatcatcgtaaacacaacattcatggacctaggagacatgacattgttatgcatgacc 32115707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746 (Bit Score: 86; Significance: 1e-40; HSPs: 2)
Name: scaffold0746
Description:

Target: scaffold0746; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 606 - 763
Target Start/End: Complemental strand, 654 - 497
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaag 705  Q
    |||||||| ||||||||||||| ||||||||||||||||| ||  |||||||||| ||| | |||||| ||||| ||||||| |||||||||  |||||     
T  654 tccttttaatttgatagaattttcaagttagtcctttaagttttgaaagtttcaattaggtccttttaatttgacagaattctcaagttagtcctttaaa 555  T
Q  706 tttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgc 763  Q
    |||| ||||||| ||||||||| |||||||||||||||||||||||||||||| ||||    
T  554 tttcaaaagtttcaaataggtcattttagttgataaactatttcactgttacccctgc 497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 601 - 757
Target Start/End: Original strand, 21 - 176
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| |||||||||||||| | ||||  ||||||||||||| ||| ||||||||||| ||||| || ||||||||||||  ||||||  ||||||| | |    
T  21 tttggtccttttagtttgacataattctcaagttagtccttcaagtttcaaaagttttaaatatatccttttagtttgaccgaattcctaagttag-tat 119  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttac 757  Q
    ||||||||  ||||||| ||||| ||| |||||||||||||||||||||||||||||    
T  120 ttaagtttgaaaagtttcaaatatgtcattttagttgataaactatttcactgttac 176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 7e-39; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 601 - 751
Target Start/End: Original strand, 34336034 - 34336184
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    ||||||||||||||||||||| ||||| ||| ||||||||||||| ||  |||||||||| ||  |  ||||||||||| ||||||| |||||||||  |    
T  34336034 tttgatccttttagtttgataaaattttcaaattagtcctttaagttttgaaagtttcaattatgtcattttagtttgacagaattcccaagttagtcct 34336133  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcac 751  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  34336134 ttaagtttcaaaagttttaaataggtctttttagttaataaactatttcac 34336184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 601 - 751
Target Start/End: Complemental strand, 31264285 - 31264133
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagtta--gtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtt 698  Q
    ||||||||||||||||||| |||||||||||||||  || ||||||| ||| |||||||||| ||  | |||||||||||| ||||||  ||||||||||    
T  31264285 tttgatccttttagtttgacagaatttccaagttatagtactttaagtttcgaaagtttcaattaagtccttttagtttgacagaatttccaagttagtt 31264186  T
Q  699 ttttaagtttctaaagttttaaataggtctttttagttgataaactatttcac 751  Q
     |||||||||| ||||||| ||||||||| |||||||||||||||||||||||    
T  31264185 atttaagtttcaaaagtttcaaataggtccttttagttgataaactatttcac 31264133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 601 - 750
Target Start/End: Complemental strand, 27893685 - 27893536
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| |||||||||||||| | ||||  ||||||||||||||||| |||  ||||||||| ||| |||||||||||||| ||||||| |||||||||  |    
T  27893685 tttggtccttttagtttgacaaaattctcaagttagtcctttaagtttcgtaagtttcaattaggttcttttagtttgacagaattcccaagttagtcct 27893586  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttca 750  Q
    ||||||||| ||||||| |||||| || ||||||||||||||||||||||    
T  27893585 ttaagtttcaaaagtttcaaatagatcattttagttgataaactatttca 27893536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 601 - 764
Target Start/End: Complemental strand, 36196626 - 36196465
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| |||||||||||||| |  |||| ||| ||||||||||||| ||| |||||||||| ||| |  ||||||||||| ||||||  |||||||||  |    
T  36196626 tttggtccttttagtttgaca--attttcaaattagtcctttaagtttcgaaagtttcaattaggtctttttagtttgacagaatttccaagttagtcat 36196529  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgct 764  Q
    || |||||| ||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||    
T  36196528 ttgagtttcaaaagtttcaaataggtcattttagttgataaactatttcaccgttacccctgct 36196465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 609 - 726
Target Start/End: Original strand, 31263932 - 31264049
Alignment:
Q  609 ttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagttt 708  Q
    ||||||||||| ||||||||||||||| ||||||||| ||| |||||||||| ||| | |||||||||||| ||||||| |||||||||  |||||||||    
T  31263932 ttttagtttgacagaatttccaagttaatcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaattctcaagttagtcctttaagttt 31264031  T
Q  709 ctaaagttttaaataggt 726  Q
    | ||||||| ||||||||    
T  31264032 caaaagtttcaaataggt 31264049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 598 - 765
Target Start/End: Complemental strand, 11871878 - 11871711
Alignment:
Q  598 atgtttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagt 697  Q
    ||||||| |||||||||||||| ||||||||||||  ||||| ||||| ||  ||| |||||| ||  | || ||||||||| ||||||| | |||||||    
T  11871878 atgtttggtccttttagtttgacagaatttccaagccagtccgttaagttttgaaactttcaattatgtcctcttagtttgacagaattctcgagttagt 11871779  T
Q  698 tttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgcta 765  Q
      |||||||||| ||||||||||||| ||| |||||||||||||| ||||| || |||||| ||||||    
T  11871778 cctttaagtttcaaaagttttaaatatgtcattttagttgataaattatttaaccgttacccctgcta 11871711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 600 - 780
Target Start/End: Original strand, 27893033 - 27893203
Alignment:
Q  600 gtttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttt 699  Q
    ||||| |||||||||||||| ||||||  ||||||| ||||||||  ||| |||||||||| || ||  ||||||||||| || |||| |||||||||      
T  27893033 gtttggtccttttagtttgacagaattctcaagttaatcctttaaatttcgaaagtttcaattatatctttttagtttgacagtattcccaagttagtcc 27893132  T
Q  700 tttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgctagtcagtaaataatta 780  Q
    ||||||||||         ||||||||||||||||||||||||||||||||  |||||||||||| |||||| ||||||||    
T  27893133 tttaagtttc---------aaataggtctttttagttgataaactatttcaacgttacctctgct-gtcagttaataatta 27893203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 606 - 717
Target Start/End: Original strand, 30907138 - 30907249
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaag 705  Q
    |||||||||||||| | ||||  ||||||||||||||||| |||||||||||||||||||| ||||||| |||| | ||||| |||||||||  ||||||    
T  30907138 tccttttagtttgacataattctcaagttagtcctttaagtttcaaaagtttcaaatagatccttttagattgacataattcccaagttagtcatttaag 30907237  T
Q  706 tttctaaagttt 717  Q
    |||| |||||||    
T  30907238 tttcaaaagttt 30907249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 606 - 709
Target Start/End: Original strand, 31263989 - 31264092
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaag 705  Q
    |||||||||||||| ||||||  ||||||||||||||||| |||||||||||||||||| |||||||  ||||| ||||||| |||||||||  ||||||    
T  31263989 tccttttagtttgacagaattctcaagttagtcctttaagtttcaaaagtttcaaataggttctttttctttgacagaattcccaagttagtactttaag 31264088  T
Q  706 tttc 709  Q
    ||||    
T  31264089 tttc 31264092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 608 - 734
Target Start/End: Original strand, 30907080 - 30907206
Alignment:
Q  608 cttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagtt 707  Q
    |||||||||||| ||||||  |||||||||| |||||| ||| |||||||||| ||| | |||||||||||| | ||||| |||||||||  ||||||||    
T  30907080 cttttagtttgacagaattctcaagttagtcttttaagtttcgaaagtttcaattaggtccttttagtttgacataattctcaagttagtcctttaagtt 30907179  T
Q  708 tctaaagttttaaataggtctttttag 734  Q
    || ||||||| |||||| || ||||||    
T  30907180 tcaaaagtttcaaatagatccttttag 30907206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 637 - 757
Target Start/End: Original strand, 19080664 - 19080784
Alignment:
Q  637 tcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagtt 736  Q
    ||||||||| ||  |||||||||| ||| |  ||||||||||| ||||||  ||||||||   |||||||||| ||||||| | ||||||| ||||||||    
T  19080664 tcctttaagttttgaaagtttcaattaggtcattttagtttgacagaattttcaagttagacatttaagtttcaaaagtttcatataggtccttttagtt 19080763  T
Q  737 gataaactatttcactgttac 757  Q
    ||||||||||||||| |||||    
T  19080764 gataaactatttcaccgttac 19080784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 605 - 723
Target Start/End: Complemental strand, 30907435 - 30907316
Alignment:
Q  605 atccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattctttt-agtttgatagaattcgcaagttagtttttta 703  Q
    ||||||||||||||| | |||||  ||||||||| |||||| ||| |||||||||| ||| | ||||| ||||||| ||||||| |||||||||  ||||    
T  30907435 atccttttagtttgacaaaatttataagttagtcatttaagtttcgaaagtttcaattaggtccttttaagtttgaaagaattctcaagttagtccttta 30907336  T
Q  704 agtttctaaagttttaaata 723  Q
    |||||| ||||||| |||||    
T  30907335 agtttcaaaagtttcaaata 30907316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 606 - 757
Target Start/End: Complemental strand, 39301943 - 39301801
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaag 705  Q
    ||||||||||||||||||||||  |||||||||||||||  || |||||||| || || ||  ||||||||||| ||||||   |||||| || ||||||    
T  39301943 tccttttagtttgatagaatttttaagttagtcctttaaattttaaaagttttaattaaatctttttagtttgacagaatttttaagttatttctttaag 39301844  T
Q  706 tttctaaagttttaaataggtctttttagttgataaactatttcactgttac 757  Q
    ||||         ||||||| | |||||||||||||||||||||||||||||    
T  39301843 tttc---------aaataggccattttagttgataaactatttcactgttac 39301801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 601 - 751
Target Start/End: Complemental strand, 41265369 - 41265228
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    ||||||||||||||||||| ||||||  |||||||||| |||||| ||| |||||||||| ||  | || ||| ||||| ||||||| |||||||||  |    
T  41265369 tttgatccttttagtttgagagaattatcaagttagtcatttaagtttcgaaagtttcaattatgtcctcttaatttgacagaattctcaagttagtcct 41265270  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcac 751  Q
    |||||||||         ||||| ||| |||||||||||||||||||||||    
T  41265269 ttaagtttc---------aaataagtcattttagttgataaactatttcac 41265228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 690 - 758
Target Start/End: Complemental strand, 42117242 - 42117174
Alignment:
Q  690 aagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
    ||||||||  |||||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  42117242 aagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacc 42117174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 601 - 724
Target Start/End: Original strand, 8260384 - 8260507
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    ||||||| ||||||||| | ||||||  ||| ||||||||||||| ||| |||||||||| |||||  ||||||||||| ||| ||| ||| ||| | ||    
T  8260384 tttgatcattttagttttacagaattctcaaattagtcctttaagtttcgaaagtttcaattagatcattttagtttgacagagttctcaaattactctt 8260483  T
Q  701 ttaagtttctaaagttttaaatag 724  Q
    |||| |||| ||||||| ||||||    
T  8260484 ttaattttcaaaagtttcaaatag 8260507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 667 - 736
Target Start/End: Original strand, 30907079 - 30907148
Alignment:
Q  667 tcttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagtt 736  Q
    ||||||||||||| ||||||| ||||||||| ||||||||||| ||||||| || |||||| ||||||||    
T  30907079 tcttttagtttgacagaattctcaagttagtcttttaagtttcgaaagtttcaattaggtccttttagtt 30907148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 668 - 764
Target Start/End: Complemental strand, 15506562 - 15506466
Alignment:
Q  668 cttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgct 764  Q
    ||||| |||| | ||||||| ||| |||||| ||||| |||  ||||||||||||| ||| |||||||||||||||||||||||  ||| |||||||    
T  15506562 cttttggtttaacagaattctcaatttagttatttaaattttaaaagttttaaatatgtccttttagttgataaactatttcaccattatctctgct 15506466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 662 - 780
Target Start/End: Original strand, 20535502 - 20535620
Alignment:
Q  662 tagattcttttagtttgatagaattcgcaagttagttttttaa-gtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctc 760  Q
    ||||| |||||||||| | | ||||  |||||||||  ||||| ||||| || |||| ||||||||| ||||||||||||||||||||||| |||| | |    
T  20535502 tagatccttttagtttaacataattatcaagttagtcatttaaagtttcaaatgtttcaaataggtcattttagttgataaactatttcaccgttatccc 20535601  T
Q  761 tgctagtcagtaaataatta 780  Q
    |||| |||||| ||||||||    
T  20535602 tgct-gtcagttaataatta 20535620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 601 - 676
Target Start/End: Complemental strand, 42117271 - 42117196
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtt 676  Q
    |||| |||||||||||||  |||| ||| |||||||||||||||| ||||||||||| |||||| | |||||||||    
T  42117271 tttggtccttttagtttgtcagaaattctaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 42117196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 669 - 751
Target Start/End: Complemental strand, 5117134 - 5117053
Alignment:
Q  669 ttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcac 751  Q
    ||||||||| | |||||||  |||||||| ||| |||| || ||||||||||||| |||||||||||||||||| ||||||||    
T  5117134 ttttagtttcacagaattcataagttagtgttt-aagtatcgaaagttttaaatatgtctttttagttgataaattatttcac 5117053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 608 - 697
Target Start/End: Original strand, 32341459 - 32341549
Alignment:
Q  608 cttttagtttgatagaatttccaagttagtcc-tttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagt 697  Q
    |||||||||||| ||||||| ||| ||||||| |||||| || |||| |||||||||| |||||||| ||||| ||||||| ||| |||||    
T  32341459 cttttagtttgaaagaattttcaaattagtccttttaagttttaaaaatttcaaataggttcttttattttgacagaattctcaatttagt 32341549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 601 - 646
Target Start/End: Complemental strand, 13315852 - 13315807
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaaga 646  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||    
T  13315852 tttgatccttttagtttgacataatttccaagttagtcctttaaga 13315807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 668 - 756
Target Start/End: Original strand, 15506052 - 15506140
Alignment:
Q  668 cttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgtta 756  Q
    |||||||||||| | ||||| ||| ||| |  |||||||||  ||||||||||| ||||| ||||| ||||||||||||||||| ||||    
T  15506052 cttttagtttgacataattctcaaattaatcctttaagtttaaaaagttttaaagaggtcattttaattgataaactatttcaccgtta 15506140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 606 - 714
Target Start/End: Original strand, 34429685 - 34429793
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaag 705  Q
    |||||||||||||| ||||||  ||||||||||||||||  ||| ||| |||||| ||| | |||||| ||||| ||||||  ||||||| |  ||||||    
T  34429685 tccttttagtttgacagaattctcaagttagtcctttaaatttcgaaaatttcaattaggtccttttaatttgaaagaatttccaagttaatcctttaag 34429784  T
Q  706 tttctaaag 714  Q
    |||| ||||    
T  34429785 tttcaaaag 34429793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 616 - 664
Target Start/End: Complemental strand, 39376456 - 39376408
Alignment:
Q  616 ttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatag 664  Q
    |||| ||||||||||||||||||||||||| |||||| |||||||||||    
T  39376456 ttgacagaatttccaagttagtcctttaagtttcaaacgtttcaaatag 39376408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 609 - 676
Target Start/End: Original strand, 19080696 - 19080763
Alignment:
Q  609 ttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtt 676  Q
    ||||||||||| ||||||| |||||||| | |||||| ||||||||||||| |||| | |||||||||    
T  19080696 ttttagtttgacagaattttcaagttagacatttaagtttcaaaagtttcatataggtccttttagtt 19080763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 669 - 736
Target Start/End: Complemental strand, 19081124 - 19081057
Alignment:
Q  669 ttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagtt 736  Q
    ||||||||||| ||||||| ||| ||||| ||||||||||| ||||||| || ||||| |||||||||    
T  19081124 ttttagtttgacagaattctcaaattagtcttttaagtttcgaaagtttcaattaggtgtttttagtt 19081057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 606 - 653
Target Start/End: Original strand, 21813210 - 21813257
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaa 653  Q
    |||||||||||||||||||||  ||||||||||||||||| |||||||    
T  21813210 tccttttagtttgatagaattctcaagttagtcctttaagtttcaaaa 21813257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 601 - 736
Target Start/End: Complemental strand, 34336398 - 34336263
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| |||||||||||||| ||||||  ||| ||||||||||||  ||| |||||||||  ||  | |||||| ||||| | ||||| ||| |||||| |    
T  34336398 tttggtccttttagtttgacagaattctcaaattagtcctttaaatttcgaaagtttcagttaagtccttttaatttgacaaaattctcaaattagttct 34336299  T
Q  701 ttaagtttctaaagttttaaataggtctttttagtt 736  Q
    |||| |||| ||||||| ||||| ||| || |||||    
T  34336298 ttaaatttcaaaagtttcaaataagtccttgtagtt 34336263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 609 - 717
Target Start/End: Complemental strand, 16781166 - 16781057
Alignment:
Q  609 ttttagtttgatagaatttccaagttagtccttt-aagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagtt 707  Q
    ||||||||||| ||||||  |||||||||||||| ||| ||  ||||||| || ||| | |||||||||||| | ||||| |||||||||  ||||| ||    
T  16781166 ttttagtttgacagaattctcaagttagtccttttaagttttgaaagttttaattaggtccttttagtttgacaaaattcacaagttagtcctttaaatt 16781067  T
Q  708 tctaaagttt 717  Q
    || |||||||    
T  16781066 tcaaaagttt 16781057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 661
Target Start/End: Original strand, 30907196 - 30907253
Alignment:
Q  604 gatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaa 661  Q
    ||||||||||| |||| | |||| ||||||||||| |||||| |||||||||||||||    
T  30907196 gatccttttagattgacataattcccaagttagtcatttaagtttcaaaagtttcaaa 30907253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 601 - 652
Target Start/End: Original strand, 16780938 - 16780989
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaa 652  Q
    ||||||||||||| || || ||||||| ||||||||||||||||| ||||||    
T  16780938 tttgatccttttaattcgacagaattttcaagttagtcctttaagtttcaaa 16780989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 668 - 751
Target Start/End: Original strand, 21813212 - 21813286
Alignment:
Q  668 cttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcac 751  Q
    |||||||||||||||||||| |||||||||  ||||||||||         ||| ||||| |||||||||||||||||||||||    
T  21813212 cttttagtttgatagaattctcaagttagtcctttaagtttc---------aaaaaggtccttttagttgataaactatttcac 21813286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 709
Target Start/End: Complemental strand, 34336333 - 34336230
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaag 705  Q
    |||||||| ||||| | ||||  ||| ||||| ||||||  |||||||||||||||||  | ||| |||||||| ||||||  ||||||| | |||||||    
T  34336333 tccttttaatttgacaaaattctcaaattagttctttaaatttcaaaagtttcaaataagtccttgtagtttgacagaattttcaagttaatcttttaag 34336234  T
Q  706 tttc 709  Q
    ||||    
T  34336233 tttc 34336230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 609 - 652
Target Start/End: Original strand, 37543014 - 37543057
Alignment:
Q  609 ttttagtttgatagaatttccaagttagtcctttaagattcaaa 652  Q
    ||||||||||| | ||||||||||||||||||||||| ||||||    
T  37543014 ttttagtttgacataatttccaagttagtcctttaagtttcaaa 37543057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 608 - 679
Target Start/End: Complemental strand, 37543197 - 37543126
Alignment:
Q  608 cttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttga 679  Q
    |||||||||||| ||||||| |||||||||| |||||| ||  |||||||||| ||  | ||||||||||||    
T  37543197 cttttagtttgacagaattttcaagttagtcttttaagttttgaaagtttcaattaagtccttttagtttga 37543126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 16781108 - 16781054
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaa 660  Q
    |||||||||||||| | ||||  ||||||||||||||||  ||||||||||||||    
T  16781108 tccttttagtttgacaaaattcacaagttagtcctttaaatttcaaaagtttcaa 16781054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 666 - 736
Target Start/End: Complemental strand, 37543199 - 37543129
Alignment:
Q  666 ttcttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagtt 736  Q
    |||||||||||||| ||||||  ||||||||| ||||||||||  ||||||| || || ||| ||||||||    
T  37543199 ttcttttagtttgacagaattttcaagttagtcttttaagttttgaaagtttcaattaagtccttttagtt 37543129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 291 - 367
Target Start/End: Original strand, 13413263 - 13413340
Alignment:
Q  291 cctttttagatggtaaaatcaattttcttaaacacaacattcat-gatctatgagccataacattgatatgcatgacc 367  Q
    ||||||| ||||| |||| ||||| || |||||||||||||||| || ||| ||| ||| |||||| |||||||||||    
T  13413263 cctttttggatggcaaaaccaattctcataaacacaacattcatggacctaggagacatgacattgttatgcatgacc 13413340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 82; Significance: 3e-38; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 606 - 763
Target Start/End: Original strand, 28549 - 28706
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaag 705  Q
    |||||||| ||||| ||||||||||||||||||||||||| ||  |||||||||| ||| | |||||| ||||| ||||||| |||||||||  |||||     
T  28549 tccttttaatttgacagaatttccaagttagtcctttaagttttgaaagtttcaattaggtccttttaatttgacagaattctcaagttagtcctttaaa 28648  T
Q  706 tttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgc 763  Q
     ||| ||||||| ||||||||| |||||||||||||||||||||||||||||| ||||    
T  28649 attcaaaagtttcaaataggtcattttagttgataaactatttcactgttacccctgc 28706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 712 - 757
Target Start/End: Complemental strand, 29072 - 29027
Alignment:
Q  712 aagttttaaataggtctttttagttgataaactatttcactgttac 757  Q
    |||||| ||||| ||| |||||||||||||| ||||||||||||||    
T  29072 aagtttcaaatatgtcattttagttgataaattatttcactgttac 29027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 3e-38; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 601 - 758
Target Start/End: Complemental strand, 31247768 - 31247611
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| |||||||| ||||| ||||||||||||||||||||||||| ||| |||||||||| ||| | ||||||||| || ||||||| |||||||||  |    
T  31247768 tttggtccttttaatttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtccttttagttggacagaattcccaagttagtgct 31247669  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
    ||||||||| ||||||| ||||| ||| |||||||||||||| ||||||||| |||||    
T  31247668 ttaagtttcaaaagtttcaaatatgtcattttagttgataaattatttcactattacc 31247611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 601 - 764
Target Start/End: Original strand, 4276135 - 4276298
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| |||||||||||||| |  ||||  |||||||| ||||||| ||  |||||||||| ||  |  ||||||||||| | ||||   | ||||||| |    
T  4276135 tttggtccttttagtttgacaatatttttaagttagttctttaagttttgaaagtttcaattaagtctttttagtttgacataatttttatgttagttct 4276234  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgct 764  Q
    ||||||||| ||||||| |||||| || |||||||||||||||||||||||||||||| |||||    
T  4276235 ttaagtttcaaaagtttcaaatagttcattttagttgataaactatttcactgttacccctgct 4276298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 666 - 764
Target Start/End: Original strand, 21376631 - 21376729
Alignment:
Q  666 ttcttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgct 764  Q
    |||||||||||||||||||||  || ||| ||  |||||||||| ||||||||||||| ||| ||||||||||||||||||||||| |||||| |||||    
T  21376631 ttcttttagtttgatagaattttcaggttggtcctttaagtttcaaaagttttaaatatgtcattttagttgataaactatttcaccgttaccactgct 21376729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 667 - 757
Target Start/End: Original strand, 19153883 - 19153974
Alignment:
Q  667 tcttttagtttgatagaattcg-caagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttac 757  Q
    ||||||||||||| |||||| | |||||||||| |||||||||| || |||| ||||| |||||||||||||||||| ||||||||||||||    
T  19153883 tcttttagtttgacagaatttgtcaagttagttatttaagtttcaaatgtttcaaatatgtctttttagttgataaattatttcactgttac 19153974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 600 - 780
Target Start/End: Original strand, 35555525 - 35555705
Alignment:
Q  600 gtttgatccttttagtttgatagaatttccaagttag-tcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtt 698  Q
    ||||| ||||||||  |||| ||||||  |||||||| || |||||| |||||||||||||| || ||  ||||||||||| ||||||  |||||||||     
T  35555525 gtttggtccttttaaattgacagaattcacaagttagatcttttaagtttcaaaagtttcaattaaatcattttagtttgacagaattatcaagttagtc 35555624  T
Q  699 ttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgctagtcagtaaataatta 780  Q
      |||| |||  ||||||| |||||  || ||||||||||||||||||||||| |||| | |||||| ||||| ||||||||    
T  35555625 cattaaattttgaaagtttcaaataaatcattttagttgataaactatttcaccgttatccctgcta-tcagttaataatta 35555705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 606 - 693
Target Start/End: Original strand, 3087087 - 3087173
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagt 693  Q
    |||||||| ||||||||||||| |||||||||| |||||| ||||||||||| ||||| || |||||||||||| ||||||| |||||    
T  3087087 tccttttaatttgatagaattttcaagttagtc-tttaagtttcaaaagttttaaataaatccttttagtttgacagaattctcaagt 3087173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 652 - 757
Target Start/End: Original strand, 31247178 - 31247282
Alignment:
Q  652 aagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcac 751  Q
    |||||| ||||| || |||||||||||| | ||||| ||||||||| ||| ||||||| ||||||| ||||| ||| | |||||||||||||||||| ||    
T  31247178 aagttttaaatatatccttttagtttgacaaaattctcaagttagtcttt-aagtttcaaaagtttcaaataagtcctattagttgataaactattttac 31247276  T
Q  752 tgttac 757  Q
    ||||||    
T  31247277 tgttac 31247282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 608 - 717
Target Start/End: Complemental strand, 54456912 - 54456803
Alignment:
Q  608 cttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagtt 707  Q
    ||||||||||||||||| |||||| ||| ||| |||||  ||||||||||||||||| | |||||| ||||| | ||||  |||||||||  ||||||||    
T  54456912 cttttagtttgatagaacttccaaattattcccttaagtatcaaaagtttcaaataggtccttttaatttgacataatttccaagttagtcctttaagtt 54456813  T
Q  708 tctaaagttt 717  Q
    || |||||||    
T  54456812 tcaaaagttt 54456803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 601 - 733
Target Start/End: Complemental strand, 54456979 - 54456847
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| |||||||||||| ||||||||  |||||||| |||||||| ||  |||| ||||| ||||||||||||||||||||||| |  ||| ||| |       
T  54456979 tttggtccttttagtttaatagaattctcaagttagccctttaagtttagaaagcttcaattagattcttttagtttgatagaacttccaaattattccc 54456880  T
Q  701 ttaagtttctaaagttttaaataggtcttttta 733  Q
    |||||| || ||||||| ||||||||| |||||    
T  54456879 ttaagtatcaaaagtttcaaataggtcctttta 54456847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 700 - 761
Target Start/End: Complemental strand, 21410332 - 21410270
Alignment:
Q  700 tttaagtttctaaagttttaaat-aggtctttttagttgataaactatttcactgttacctct 761  Q
    |||||||||| |||||||||||| | ||| |||||||||||||||||||||||||||||||||    
T  21410332 tttaagtttcaaaagttttaaattatgtcattttagttgataaactatttcactgttacctct 21410270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 668 - 751
Target Start/End: Original strand, 24707474 - 24707557
Alignment:
Q  668 cttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcac 751  Q
    |||||||||| | ||||||  |||||||||  |||||||||  |||||||||||||  || |||||||||||||||||||||||    
T  24707474 cttttagttttacagaatttccaagttagtcctttaagttttcaaagttttaaatatatcattttagttgataaactatttcac 24707557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 601 - 751
Target Start/End: Original strand, 50530246 - 50530386
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    ||||||||||||||||||| ||||||| ||| |||||| |||||| ||||||||| | || ||| |  ||||||||||| ||||||| ||| || |        
T  50530246 tttgatccttttagtttgacagaattttcaacttagtcttttaagtttcaaaagtattaattaggtcattttagtttgacagaattctcaaatttg---- 50530341  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcac 751  Q
          | || |||||||||||||||| ||||| |||||||||||||||||    
T  50530342 ------tccttaagttttaaataggtcattttaattgataaactatttcac 50530386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 606 - 661
Target Start/End: Complemental strand, 54456854 - 54456799
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaa 661  Q
    |||||||| ||||| | ||||||||||||||||||||||| |||||||||||||||    
T  54456854 tccttttaatttgacataatttccaagttagtcctttaagtttcaaaagtttcaaa 54456799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 601 - 663
Target Start/End: Original strand, 54456671 - 54456733
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaata 663  Q
    ||||||||||||||||||| |||||||| || |||||| |||||| ||| |||||||||||||    
T  54456671 tttgatccttttagtttgacagaatttcgaaattagtcatttaagtttcgaaagtttcaaata 54456733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 608 - 663
Target Start/End: Original strand, 21376633 - 21376688
Alignment:
Q  608 cttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaata 663  Q
    |||||||||||||||||||| || ||| |||||||||| ||||||||||| |||||    
T  21376633 cttttagtttgatagaattttcaggttggtcctttaagtttcaaaagttttaaata 21376688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 600 - 679
Target Start/End: Complemental strand, 21377124 - 21377045
Alignment:
Q  600 gtttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttga 679  Q
    ||||| |||||||||||||| ||||||||||||||| | ||||||  ||| |||||||||| ||| |  |||||||||||    
T  21377124 gtttggtccttttagtttgacagaatttccaagttaatactttaaatttcgaaagtttcaattaggtcattttagtttga 21377045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 668 - 751
Target Start/End: Original strand, 54456678 - 54456761
Alignment:
Q  668 cttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcac 751  Q
    |||||||||||| ||||||   || |||||  |||||||||| ||||||| ||||| ||| ||||||||||||||||| |||||    
T  54456678 cttttagtttgacagaatttcgaaattagtcatttaagtttcgaaagtttcaaatatgtcattttagttgataaactaattcac 54456761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 604 - 677
Target Start/End: Complemental strand, 5505802 - 5505728
Alignment:
Q  604 gatccttttagtttgatagaatttccaagttagtccttt-aagattcaaaagtttcaaatagattcttttagttt 677  Q
    ||||||||| |||||| | |||||| || |||||||||| ||| ||||||||||| |||||||| ||||||||||    
T  5505802 gatcctttttgtttgacataatttcaaaattagtccttttaagtttcaaaagttttaaatagatccttttagttt 5505728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 606 - 676
Target Start/End: Original strand, 24707472 - 24707542
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtt 676  Q
    |||||||||||| | ||||||||||||||||||||||||| ||  ||||||| ||||| ||  ||||||||    
T  24707472 tccttttagttttacagaatttccaagttagtcctttaagttttcaaagttttaaatatatcattttagtt 24707542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 715 - 752
Target Start/End: Original strand, 35545218 - 35545255
Alignment:
Q  715 ttttaaataggtctttttagttgataaactatttcact 752  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  35545218 ttttaaataagtctttttagttgataaactatttcact 35545255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 652
Target Start/End: Complemental strand, 4276677 - 4276629
Alignment:
Q  604 gatccttttagtttgatagaatttccaagttagtcctttaagattcaaa 652  Q
    |||| ||||||||||| |||||| |||||||||||||||||| ||||||    
T  4276677 gatcattttagtttgacagaattcccaagttagtcctttaagtttcaaa 4276629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 600 - 652
Target Start/End: Original strand, 14629284 - 14629336
Alignment:
Q  600 gtttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaa 652  Q
    ||||| |||||||| ||||| |||||| |||||||||||||||||| ||||||    
T  14629284 gtttggtccttttactttgacagaattcccaagttagtcctttaagtttcaaa 14629336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 712 - 780
Target Start/End: Complemental strand, 21377032 - 21376965
Alignment:
Q  712 aagttttaaataggtctttttagttgataaactatttcactgttacctctgctagtcagtaaataatta 780  Q
    |||||| ||||||||| |||||||| |||||||||||||| |||||| || || |||||| ||||||||    
T  21377032 aagtttcaaataggtccttttagtttataaactatttcaccgttacccctact-gtcagttaataatta 21376965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 601 - 756
Target Start/End: Complemental strand, 3088217 - 3088071
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| |||||||||||||| ||||||| ||||||| | ||||||  ||| |||||||||| ||  | |||||||||||| |  |||  | |||||||  |    
T  3088217 tttggtccttttagtttgacagaattttcaagttaatgctttaaatttcgaaagtttcaattatgtccttttagtttgacatgatttcctagttagtcct 3088118  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgtta 756  Q
    |||||||||         ||||||||| ||||| ||||||||||||||||| ||||    
T  3088117 ttaagtttc---------aaataggtccttttaattgataaactatttcaccgtta 3088071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 652 - 751
Target Start/End: Complemental strand, 4276689 - 4276599
Alignment:
Q  652 aagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcac 751  Q
    ||||||||| |||||  ||||||||||| ||||||| |||||||||  ||||||||||         |||||| || |||||||||||||||||||||||    
T  4276689 aagtttcaattagatcattttagtttgacagaattcccaagttagtcctttaagtttc---------aaatagatcattttagttgataaactatttcac 4276599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 606 - 652
Target Start/End: Original strand, 14964738 - 14964784
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaa 652  Q
    |||||||||||||| ||||||| |||||||||| |||||| ||||||    
T  14964738 tccttttagtttgacagaattttcaagttagtcttttaagtttcaaa 14964784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 274 - 363
Target Start/End: Original strand, 26772653 - 26772743
Alignment:
Q  274 caagctgcgttgctaaccctttttagatggtaaaatcaattttcttaaacacaacattcat-gatctatgagccataacattgatatgcat 363  Q
    |||||||||  ||||  ||||||| ||||| |||||||||  || |||||||||||||||| || ||| ||| |||||||||| |||||||    
T  26772653 caagctgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattcatggacctaggagacataacattgttatgcat 26772743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 605 - 663
Target Start/End: Original strand, 31247191 - 31247248
Alignment:
Q  605 atccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaata 663  Q
    ||||||||||||||| | ||||  |||||||||| |||||| |||||||||||||||||    
T  31247191 atccttttagtttgacaaaattctcaagttagtc-tttaagtttcaaaagtttcaaata 31247248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 274 - 394
Target Start/End: Original strand, 44198662 - 44198784
Alignment:
Q  274 caagctgcgttgctaaccctttttagatggtaaaatcaattttcttaaacacaacattcat-gatctatgagccataacattgatatgcatgaccctct- 371  Q
    ||||||| || ||| | ||||||| ||||| |||||||||| ||  ||||||||||||||| || ||| ||| ||| |||||| ||||||| ||| |||     
T  44198662 caagctgtgtcgctcaacctttttggatggcaaaatcaattatcgcaaacacaacattcatggacctaggagacatgacattgctatgcataaccttctg 44198761  T
Q  372 aactatatgtagaatatcaacag 394  Q
    |||| |||||||||  |||||||    
T  44198762 aactctatgtagaaggtcaacag 44198784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 291 - 367
Target Start/End: Original strand, 13582422 - 13582499
Alignment:
Q  291 cctttttagatggtaaaatcaattttcttaaacacaacattcatgat-ctatgagccataacattgatatgcatgacc 367  Q
    ||||||| |||||  |||||||| ||| ||||||||||||||||| | ||| ||| ||| |||||| |||||||||||    
T  13582422 cctttttggatggctaaatcaatcttcgtaaacacaacattcatggtcctaggagacatgacattgttatgcatgacc 13582499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 35696472 - 35696521
Alignment:
Q  183 aaccaagtaattgagttcaagtggttaataagctctaccaaaagacgaat 232  Q
    |||||||| |||| | ||||||||||||| ||||| ||||||||||||||    
T  35696472 aaccaagtgattgggctcaagtggttaatgagctccaccaaaagacgaat 35696521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 274 - 385
Target Start/End: Complemental strand, 38979011 - 38978898
Alignment:
Q  274 caagctgcgttgctaaccctttttagatggtaaaatcaattttcttaaacacaacattcat-gatctatgagccataacattgatatgcatgaccctct- 371  Q
    |||| ||||||| ||| ||||||| ||||| ||||  ||||||| ||||||||||||| ||  | ||||||| ||| |||||| ||||||| ||| | |     
T  38979011 caagttgcgttgttaagcctttttggatggcaaaactaattttcgtaaacacaacattgataaacctatgagacatgacattgttatgcatcaccttttg 38978912  T
Q  372 aactatatgtagaa 385  Q
    ||||||||||||||    
T  38978911 aactatatgtagaa 38978898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 244
Target Start/End: Complemental strand, 40520468 - 40520423
Alignment:
Q  199 tcaagtggttaataagctctaccaaaagacgaattgtgtatgagaa 244  Q
    |||||||||||||||||||||||||| || ||||| | ||||||||    
T  40520468 tcaagtggttaataagctctaccaaatgatgaattatttatgagaa 40520423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 4e-37; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 601 - 780
Target Start/End: Complemental strand, 48352866 - 48352688
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| |||||||||||||| |||||| || |||||||| |||||| ||| |||| ||||| ||| |   |||||||||| | ||||| |||||||||  |    
T  48352866 tttggtccttttagtttgacagaattcccgagttagtcttttaagtttcgaaagattcaattaggtctatttagtttgacataattcccaagttagtcct 48352767  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgctagtcagtaaataatta 780  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||  |||| |||||| ||||||||    
T  48352766 ttaagtttcaaaagttttaaataggtcattttagttgataaactatttcactgttacccttgct-gtcagttaataatta 48352688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 597 - 758
Target Start/End: Original strand, 34254495 - 34254656
Alignment:
Q  597 aatgtttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttag 696  Q
    |||||||| |||||||||||||| ||||||  |||||| |||||||||| ||||||||||| |||||||| |||||||||||| |||||||  |||| ||    
T  34254495 aatgtttgttccttttagtttgacagaattctcaagttggtcctttaaggttcaaaagttttaaatagatccttttagtttgacagaattcctaagtcag 34254594  T
Q  697 ttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
    |  |||||||||| ||||||| |||||  |  ||||||| ||||||||||||||||||||||    
T  34254595 tcctttaagtttcaaaagtttcaaatatatgcttttagtcgataaactatttcactgttacc 34254656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 600 - 780
Target Start/End: Original strand, 27351050 - 27351229
Alignment:
Q  600 gtttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttt 699  Q
    ||||| || ||||| ||||| ||||||  ||||||||||||||||| ||| |||||||||| ||  | |||||||||||| | ||||| |||||||||      
T  27351050 gtttggtctttttactttgacagaattcgcaagttagtcctttaagtttcgaaagtttcaattaagtccttttagtttgacataattctcaagttagtcc 27351149  T
Q  700 tttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgctagtcagtaaataatta 780  Q
    |||||||||| ||||| | ||||| ||| ||||||||||||||||||||||| |||||| ||||| |||||| ||||||||    
T  27351150 tttaagtttcaaaagtatcaaataagtcattttagttgataaactatttcaccgttacccctgct-gtcagttaataatta 27351229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 601 - 758
Target Start/End: Complemental strand, 10686838 - 10686681
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| |||||||||||||| ||||||| ||||||||||||||||| ||| ||||||| |  ||| | |||||| ||  | ||||||| |||||||||  |    
T  10686838 tttggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaaagtttaagttaggtccttttacttcaacagaattctcaagttagtcat 10686739  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
    ||||||||  ||||||| ||||||||| ||||||||||||||||||||||| ||||||    
T  10686738 ttaagttttaaaagtttcaaataggtcattttagttgataaactatttcaccgttacc 10686681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 601 - 751
Target Start/End: Original strand, 44963839 - 44963989
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    ||||||| ||||||||||||||| ||   |||| ||||||||||| ||| ||||||||||  |  | ||||||||||||||| |||| ||| |||||  |    
T  44963839 tttgatctttttagtttgatagatttctaaagtaagtcctttaagtttcgaaagtttcaataaagtccttttagtttgataggattcccaaattagtcct 44963938  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcac 751  Q
    ||||||||| |||||||||||||  |||||| |||||||||||||||||||    
T  44963939 ttaagtttcaaaagttttaaatatatcttttcagttgataaactatttcac 44963989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 601 - 756
Target Start/End: Complemental strand, 29419173 - 29419014
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| |||||||||||||| | |||||||||||||||| || ||| ||| |||||||||| ||| | |||||||||||| |||||||  || ||||| ||    
T  29419173 tttggtccttttagtttgacataatttccaagttagtctttcaagtttcgaaagtttcaattaggtccttttagtttgacagaattccaaaattagtctt 29419074  T
Q  701 ttaagtttctaaagttt----taaataggtctttttagttgataaactatttcactgtta 756  Q
    ||||||||| |||||||    |||||| ||| |||||||||||||| || ||||| ||||    
T  29419073 ttaagtttcaaaagtttcaaataaataagtcattttagttgataaattacttcaccgtta 29419014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 635 - 758
Target Start/End: Original strand, 8902795 - 8902918
Alignment:
Q  635 agtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttag 734  Q
    ||||||| ||| ||| |||||||||| ||  |  ||||||||||| | ||||| |||||||||  |||||||||| ||||||||||||| ||| ||||||    
T  8902795 agtccttgaagtttcgaaagtttcaattaagtcattttagtttgacaaaattcccaagttagtcctttaagtttcaaaagttttaaataagtccttttag 8902894  T
Q  735 ttgataaactatttcactgttacc 758  Q
    |||||||| |||||||||||||||    
T  8902895 ttgataaattatttcactgttacc 8902918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 601 - 736
Target Start/End: Complemental strand, 44964197 - 44964063
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||||||||||||||| || | ||||  |||||||||| |||||| ||| |||||||||| |||||  ||||||||||| ||||||| ||||||| |  |    
T  44964197 tttgatccttttagttagacaaaattctcaagttagtc-tttaagtttcgaaagtttcaattagatcattttagtttgacagaattctcaagttattcct 44964099  T
Q  701 ttaagtttctaaagttttaaataggtctttttagtt 736  Q
    ||||||||  ||||||| ||||||||| ||||||||    
T  44964098 ttaagttttaaaagtttcaaataggtccttttagtt 44964063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 630 - 765
Target Start/End: Complemental strand, 49651096 - 49650970
Alignment:
Q  630 aagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctt 729  Q
    |||||||||||| ||| ||| ||||||| ||||||||  ||||||||||| ||||||| |||||||||  ||||||||||         |||||||||      
T  49651096 aagttagtccttcaagtttcgaaagttttaaatagatcattttagtttgacagaattctcaagttagtcctttaagtttc---------aaataggtccc 49651006  T
Q  730 tttagttgataaactatttcactgttacctctgcta 765  Q
    ||||||||||||||||||||||||||||| ||||||    
T  49651005 tttagttgataaactatttcactgttacccctgcta 49650970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 604 - 697
Target Start/End: Complemental strand, 44964135 - 44964042
Alignment:
Q  604 gatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagt 697  Q
    |||| ||||||||||| ||||||  ||||||| ||||||||| || ||||||||||||||| | |||||||||||| ||||||| |||||||||    
T  44964135 gatcattttagtttgacagaattctcaagttattcctttaagttttaaaagtttcaaataggtccttttagtttgacagaattctcaagttagt 44964042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 606 - 717
Target Start/End: Complemental strand, 17898907 - 17898796
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaag 705  Q
    |||||||||||||||||||||  ||| ||||||||||||| |||||||||||||||||  |  ||||||||||| ||||||  ||| |||||  |||||     
T  17898907 tccttttagtttgatagaattcacaaattagtcctttaagtttcaaaagtttcaaataagtcattttagtttgacagaattatcaaattagtcctttaaa 17898808  T
Q  706 tttctaaagttt 717  Q
    |||| |||||||    
T  17898807 tttcaaaagttt 17898796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 601 - 736
Target Start/End: Complemental strand, 17898972 - 17898837
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| |||||||||||||| |  |||  ||| ||||| ||||||| || |||| |||||| ||| | |||||||||||||||||||| ||| |||||  |    
T  17898972 tttggtccttttagtttgacatgattctcaaattagttctttaagttttaaaaatttcaattaggtccttttagtttgatagaattcacaaattagtcct 17898873  T
Q  701 ttaagtttctaaagttttaaataggtctttttagtt 736  Q
    ||||||||| ||||||| ||||| ||| ||||||||    
T  17898872 ttaagtttcaaaagtttcaaataagtcattttagtt 17898837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 601 - 758
Target Start/End: Original strand, 10685848 - 10685996
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| |||||||||||||| ||||||| ||||||||||||||||| ||| || ||||||| ||  |  ||||||||||| ||||||  |||||||||  |    
T  10685848 tttggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaacgtttcaattacgtctttttagtttgacagaatttccaagttagtcct 10685947  T
Q  701 ttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
    |||||||||         ||||| ||| |||||||||||||||||||| || ||||||    
T  10685948 ttaagtttc---------aaatatgtcattttagttgataaactattttaccgttacc 10685996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 666 - 757
Target Start/End: Original strand, 39302336 - 39302427
Alignment:
Q  666 ttcttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttac 757  Q
    |||||||||||||| ||||||| ||| ||| || |||||||||| |||||||  | |||||  ||||||||||||||||||||||| |||||    
T  39302336 ttcttttagtttgacagaattcacaaattaattctttaagtttcaaaagtttcgattaggttcttttagttgataaactatttcaccgttac 39302427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 609 - 695
Target Start/End: Original strand, 11897850 - 11897936
Alignment:
Q  609 ttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagtta 695  Q
    ||||||||||| ||||||  |||||||||| |||||| ||| |||||||||| ||| | |||||||||||| ||||||| |||||||    
T  11897850 ttttagtttgacagaattctcaagttagtcatttaagtttcgaaagtttcaattaggtccttttagtttgacagaattcccaagtta 11897936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 700 - 764
Target Start/End: Original strand, 2965530 - 2965594
Alignment:
Q  700 tttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgct 764  Q
    |||||||||| ||||||||||||| ||| ||||||||||||||||||||||| | ||| ||||||    
T  2965530 tttaagtttcaaaagttttaaatatgtcattttagttgataaactatttcaccgctacatctgct 2965594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 605 - 764
Target Start/End: Original strand, 49650577 - 49650728
Alignment:
Q  605 atccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagt-ttttta 703  Q
    ||||||||||||||| | ||||  ||||||||||||||||  ||  ||| |||||| ||| | |||||||||||| ||||||| |||||||||  |||||    
T  49650577 atccttttagtttgacataattctcaagttagtcctttaaattttgaaaatttcaattaggtccttttagtttgacagaattctcaagttagtcctttta 49650676  T
Q  704 agtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgct 764  Q
    ||||||         ||||||||  ||||||||||||||| |||||||| ||||| |||||    
T  49650677 agtttc---------aaataggttcttttagttgataaaccatttcactattacccctgct 49650728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 700 - 751
Target Start/End: Original strand, 1765792 - 1765843
Alignment:
Q  700 tttaagtttctaaagttttaaataggtctttttagttgataaactatttcac 751  Q
    |||||||||| |||||||||||||| || |||||||||||||||||||||||    
T  1765792 tttaagtttcaaaagttttaaatagatccttttagttgataaactatttcac 1765843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 652
Target Start/End: Complemental strand, 4772696 - 4772650
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaa 652  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||    
T  4772696 tccttttagtttgacagaatttccaagttagtcctttaagtttcaaa 4772650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 611 - 676
Target Start/End: Original strand, 1765763 - 1765828
Alignment:
Q  611 ttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtt 676  Q
    ||||||||| | |||||| || ||||||||||||| ||||||||||| |||||||| |||||||||    
T  1765763 ttagtttgacataatttctaaattagtcctttaagtttcaaaagttttaaatagatccttttagtt 1765828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 285 - 365
Target Start/End: Original strand, 2898608 - 2898689
Alignment:
Q  285 gctaaccctttttagatggtaaaatcaattttcttaaacacaacattcatgatc-tatgagccataacattgatatgcatga 365  Q
    ||||| ||||||| ||||| |||||||||  ||||||||||||||||||||||| |||||| ||| | |||| |||||||||    
T  2898608 gctaagcctttttggatggcaaaatcaatcctcttaaacacaacattcatgatcgtatgagacatgatattgttatgcatga 2898689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 669 - 758
Target Start/End: Complemental strand, 8903335 - 8903246
Alignment:
Q  669 ttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacc 758  Q
    ||||||||||| | ||||| ||||||| |  |||||||||| ||||||| |||||  || ||||||||| |||| |||||||||||||||    
T  8903335 ttttagtttgacataattctcaagttaatcctttaagtttcgaaagtttcaaatatatcattttagttgctaaattatttcactgttacc 8903246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 609 - 709
Target Start/End: Complemental strand, 1765984 - 1765884
Alignment:
Q  609 ttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagttt 708  Q
    ||||||||||| |||| |  || |||||||||||||| |||||||||||||||||  |  ||||||||||| ||||||  ||||||| |  |||||||||    
T  1765984 ttttagtttgacagaaatctcatgttagtcctttaagcttcaaaagtttcaaataagtcattttagtttgacagaatttccaagttactcctttaagttt 1765885  T
Q  709 c 709  Q
    |    
T  1765884 c 1765884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 274 - 369
Target Start/End: Original strand, 2764374 - 2764470
Alignment:
Q  274 caagctgcgttgctaaccctttttagatggtaaaatcaattttcttaaacacaacattcat-gatctatgagccataacattgatatgcatgaccct 369  Q
    |||||||||  ||||| ||||||| |||||||||||||||  || ||||||||||||| || || ||| ||| |||||||||||| ||||| |||||    
T  2764374 caagctgcgccgctaaacctttttggatggtaaaatcaatcatcgtaaacacaacatttatggacctaagagacataacattgatttgcataaccct 2764470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 609 - 676
Target Start/End: Original strand, 8902829 - 8902896
Alignment:
Q  609 ttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtt 676  Q
    ||||||||||| | |||| |||||||||||||||||| ||||||||||| |||||  | |||||||||    
T  8902829 ttttagtttgacaaaattcccaagttagtcctttaagtttcaaaagttttaaataagtccttttagtt 8902896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 669 - 736
Target Start/End: Original strand, 11897850 - 11897917
Alignment:
Q  669 ttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagtt 736  Q
    ||||||||||| ||||||| |||||||||  |||||||||| ||||||| || |||||| ||||||||    
T  11897850 ttttagtttgacagaattctcaagttagtcatttaagtttcgaaagtttcaattaggtccttttagtt 11897917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 293 - 369
Target Start/End: Original strand, 34644480 - 34644557
Alignment:
Q  293 tttttagatggtaaaatcaattttcttaaacacaacattcat-gatctatgagccataacattgatatgcatgaccct 369  Q
    ||||| ||||| |||||||||  || |||||||||||||||| || ||| ||| |||||||||||||||||| |||||    
T  34644480 tttttggatggcaaaatcaatcatcgtaaacacaacattcatggacctaggagacataacattgatatgcataaccct 34644557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 600 - 677
Target Start/End: Complemental strand, 39302813 - 39302736
Alignment:
Q  600 gtttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagttt 677  Q
    ||||| |||||||||||||| ||||||  ||||||||||||||||  || ||||||||||| || ||  |||||||||    
T  39302813 gtttggtccttttagtttgacagaattctcaagttagtcctttaaattttaaaagtttcaactatatcgttttagttt 39302736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 609 - 652
Target Start/End: Complemental strand, 1765924 - 1765881
Alignment:
Q  609 ttttagtttgatagaatttccaagttagtcctttaagattcaaa 652  Q
    ||||||||||| ||||||||||||||| ||||||||| ||||||    
T  1765924 ttttagtttgacagaatttccaagttactcctttaagtttcaaa 1765881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 609 - 736
Target Start/End: Complemental strand, 1766044 - 1765917
Alignment:
Q  609 ttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagttt 708  Q
    ||||| ||||| ||||||  |||||||||| |||||  ||||||||||| || ||  |  ||||||||||| |||| || || ||||||  |||||| ||    
T  1766044 ttttaatttgacagaattctcaagttagtcttttaaatttcaaaagtttaaattatgtcattttagtttgacagaaatctcatgttagtcctttaagctt 1765945  T
Q  709 ctaaagttttaaataggtctttttagtt 736  Q
    | ||||||| ||||| ||| ||||||||    
T  1765944 caaaagtttcaaataagtcattttagtt 1765917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 661
Target Start/End: Complemental strand, 44964073 - 44964018
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaa 661  Q
    |||||||||||||| ||||||  ||||||||||||||||  || ||||||||||||    
T  44964073 tccttttagtttgacagaattctcaagttagtcctttaaattttaaaagtttcaaa 44964018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 610 - 664
Target Start/End: Complemental strand, 34255053 - 34255000
Alignment:
Q  610 tttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatag 664  Q
    |||||||||| ||||||||||||||||   |||||| ||||||||||||||||||    
T  34255053 tttagtttgacagaatttccaagttag-attttaagtttcaaaagtttcaaatag 34255000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 274 - 425
Target Start/End: Complemental strand, 31737534 - 31737382
Alignment:
Q  274 caagctgcgttgctaaccctttttagatggtaaaatcaattttcttaaacacaacattcatg-atctatgagccataacattgatatgcatgaccctct- 371  Q
    |||||||||  || || ||||||| ||||| |||||||||  || ||||||| | ||||||| ||||| ||  |||||||||||||||||||||| | |     
T  31737534 caagctgcgccgccaagcctttttggatggcaaaatcaatcctcgtaaacacta-attcatggatctaggaaacataacattgatatgcatgaccttttg 31737436  T
Q  372 aactatatgtagaatatcaacagtttctaatgccaagaaaccaaaagtgtcaaa 425  Q
    |||| |||||||||| |||| ||  |||||||| |  ||| | |||||||||||    
T  31737435 aactctatgtagaatgtcaatagcctctaatgctagaaaatcgaaagtgtcaaa 31737382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 286 - 331
Target Start/End: Complemental strand, 35550275 - 35550230
Alignment:
Q  286 ctaaccctttttagatggtaaaatcaattttcttaaacacaacatt 331  Q
    ||||| |||||||||| |||||||||||  ||||||||||||||||    
T  35550275 ctaactctttttagattgtaaaatcaatcctcttaaacacaacatt 35550230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 647 - 704
Target Start/End: Original strand, 35701487 - 35701544
Alignment:
Q  647 ttcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaa 704  Q
    ||||||||||| ||||| ||||||||| ||||| | ||||| ||||||||| ||||||    
T  35701487 ttcaaaagttttaaataaattcttttaatttgacataattctcaagttagtcttttaa 35701544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 711 - 764
Target Start/End: Original strand, 48352310 - 48352363
Alignment:
Q  711 aaagttttaaataggtctttttagttgataaactatttcactgttacctctgct 764  Q
    ||||||| ||||||||  ||||||||||||||||||||||| | |||| |||||    
T  48352310 aaagtttcaaataggttcttttagttgataaactatttcaccgctacccctgct 48352363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 68; Significance: 6e-30; HSPs: 4)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 601 - 736
Target Start/End: Complemental strand, 124481 - 124346
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| ||||||| |||||||| |||| |||||||||||||||||| ||| |||||||||| ||| | |||||||||||| ||||||  |||||||||  |    
T  124481 tttggtcctttttgtttgatataattcccaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaatttccaagttagtcct 124382  T
Q  701 ttaagtttctaaagttttaaataggtctttttagtt 736  Q
    ||||||||| ||||||| || |||||||||||||||    
T  124381 ttaagtttcgaaagtttcaattaggtctttttagtt 124346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 601 - 717
Target Start/End: Original strand, 124143 - 124258
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| |||||||||||||| | |||| |||||||||||||||||| ||||||||||||||| || | |||||||||||| ||||||| ||| |||| | |    
T  124143 tttggtccttttagtttgacaaaattcccaagttagtcctttaagtttcaaaagtttcaaacaggtgcttttagtttgacagaattcccaatttag-tct 124241  T
Q  701 ttaagtttctaaagttt 717  Q
    ||||||||| |||||||    
T  124242 ttaagtttcaaaagttt 124258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 606 - 694
Target Start/End: Complemental strand, 124416 - 124328
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagtt 694  Q
    |||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||| |  ||||||||||| ||||||| ||||||    
T  124416 tccttttagtttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtctttttagtttgacagaattcccaagtt 124328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 608 - 661
Target Start/End: Original strand, 124210 - 124262
Alignment:
Q  608 cttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaa 661  Q
    |||||||||||| |||||| |||| |||||| |||||| |||||||||||||||    
T  124210 cttttagtttgacagaattcccaatttagtc-tttaagtttcaaaagtttcaaa 124262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 64; Significance: 1e-27; HSPs: 3)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 606 - 765
Target Start/End: Original strand, 9399 - 9549
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaag 705  Q
    |||||||||||||| ||||||   ||||||||| |||||| |||  ||||||||| ||| | |||||||||| ||||||||| |||||||||| ||||||    
T  9399 tccttttagtttgacagaattcttaagttagtcatttaagtttcggaagtttcaattaggtccttttagtttaatagaattctcaagttagttctttaag 9498  T
Q  706 tttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgcta 765  Q
    ||||         ||||||||| |||||||||||||||||||||||||||||| ||||||    
T  9499 tttc---------aaataggtccttttagttgataaactatttcactgttacccctgcta 9549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 606 - 697
Target Start/End: Complemental strand, 9992 - 9901
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagt 697  Q
    |||||||||||||| ||||||  ||||||||| ||||||| ||| |||||||||| ||| | |||||||||||| | ||||| |||||||||    
T  9992 tccttttagtttgacagaattctcaagttagttctttaagtttcgaaagtttcaattagttccttttagtttgacataattcccaagttagt 9901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 668 - 736
Target Start/End: Complemental strand, 9990 - 9922
Alignment:
Q  668 cttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagtt 736  Q
    |||||||||||| ||||||| |||||||||| |||||||||| ||||||| || ||| || ||||||||    
T  9990 cttttagtttgacagaattctcaagttagttctttaagtttcgaaagtttcaattagttccttttagtt 9922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374 (Bit Score: 53; Significance: 5e-21; HSPs: 4)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 668 - 764
Target Start/End: Original strand, 16180 - 16276
Alignment:
Q  668 cttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacctctgct 764  Q
    |||||||||||||| ||||  ||| |||||  |||||||||  ||||||||||||||||| ||||||||||||||||||||||| |||||| |||||    
T  16180 cttttagtttgataaaatttccaaattagtcctttaagtttaaaaagttttaaataggtcattttagttgataaactatttcaccgttacccctgct 16276  T

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Target: scaffold0374; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 667 - 756
Target Start/End: Complemental strand, 16665 - 16576
Alignment:
Q  667 tcttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgtta 756  Q
    |||||| |||||||| ||||  ||||||| |  |||||||||  ||||||||||||| ||| ||||||||||||||||||||||| ||||    
T  16665 tctttttgtttgataaaatttccaagttaatcctttaagtttaaaaagttttaaataagtcattttagttgataaactatttcacagtta 16576  T

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Target: scaffold0374; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 601 - 664
Target Start/End: Original strand, 16173 - 16236
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatag 664  Q
    |||| |||||||||||||||| ||||||||| ||||||||||||| || |||||||| ||||||    
T  16173 tttggtccttttagtttgataaaatttccaaattagtcctttaagtttaaaaagttttaaatag 16236  T

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Target: scaffold0374; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 608 - 663
Target Start/End: Complemental strand, 16664 - 16609
Alignment:
Q  608 cttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaata 663  Q
    ||||| |||||||| ||||||||||||| ||||||||| || |||||||| |||||    
T  16664 ctttttgtttgataaaatttccaagttaatcctttaagtttaaaaagttttaaata 16609  T

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Target: scaffold0041 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 606 - 687
Target Start/End: Complemental strand, 45262 - 45181
Alignment:
Q  606 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattc 687  Q
    |||||||||||||| | ||||| ||| |||||| |||||| || ||||||||||||||||| |||||| ||||| |||||||    
T  45262 tccttttagtttgacataattttcaaattagtcatttaagttttaaaagtttcaaatagatccttttaatttgacagaattc 45181  T

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Target: scaffold0041; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 601 - 733
Target Start/End: Complemental strand, 45327 - 45195
Alignment:
Q  601 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagtttt 700  Q
    |||| ||||||| |||||| | ||||  |||||||||| |||||| || ||||||||||| ||| | |||||||||||| | ||||  ||| |||||  |    
T  45327 tttggtccttttggtttgacataattctcaagttagtcttttaagttttaaaagtttcaattaggtccttttagtttgacataattttcaaattagtcat 45228  T
Q  701 ttaagtttctaaagttttaaataggtcttttta 733  Q
    ||||||||  ||||||| |||||| || |||||    
T  45227 ttaagttttaaaagtttcaaatagatcctttta 45195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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