View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: F9630H-LTR4-TNT-insertion-19 (Length: 537)

Name: F9630H-LTR4-TNT-insertion-19
Description: F9630H-LTR4
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] F9630H-LTR4-TNT-insertion-19
F9630H-LTR4-TNT-insertion-19
[»] chr4 (51 HSPs)
chr4 (8-327)||(22302767-22303086)
chr4 (387-529)||(22303146-22303288)
chr4 (388-473)||(39931493-39931578)
chr4 (388-474)||(4603280-4603366)
chr4 (388-475)||(47202877-47202964)
chr4 (388-477)||(42617175-42617264)
chr4 (389-477)||(19414168-19414256)
chr4 (388-462)||(15184598-15184672)
chr4 (388-477)||(9319100-9319189)
chr4 (407-470)||(23284743-23284806)
chr4 (392-477)||(19725349-19725435)
chr4 (389-478)||(2547991-2548080)
chr4 (388-479)||(8601253-8601344)
chr4 (388-475)||(46175926-46176013)
chr4 (388-474)||(897022-897108)
chr4 (393-474)||(2141698-2141779)
chr4 (388-477)||(12495589-12495678)
chr4 (388-477)||(38345767-38345856)
chr4 (408-477)||(3966801-3966870)
chr4 (388-481)||(10046284-10046377)
chr4 (388-477)||(17222881-17222970)
chr4 (388-477)||(29877691-29877780)
chr4 (388-477)||(41228955-41229044)
chr4 (389-477)||(825735-825823)
chr4 (388-460)||(23335694-23335766)
chr4 (391-477)||(9153527-9153614)
chr4 (408-475)||(9201722-9201789)
chr4 (388-475)||(46704217-46704304)
chr4 (398-477)||(19298077-19298157)
chr4 (387-477)||(36254981-36255071)
chr4 (408-477)||(15179889-15179958)
chr4 (388-477)||(18424223-18424311)
chr4 (388-477)||(18630840-18630929)
chr4 (388-477)||(22117405-22117494)
chr4 (388-477)||(36740956-36741045)
chr4 (392-481)||(48238077-48238166)
chr4 (388-477)||(48591369-48591458)
chr4 (408-456)||(11679093-11679141)
chr4 (408-456)||(11687372-11687420)
chr4 (388-462)||(8057048-8057122)
chr4 (388-474)||(22273832-22273918)
chr4 (439-481)||(24101881-24101923)
chr4 (388-434)||(39932742-39932788)
chr4 (388-474)||(42611817-42611902)
chr4 (389-467)||(55638036-55638114)
chr4 (388-477)||(488329-488418)
chr4 (388-477)||(4398151-4398240)
chr4 (387-456)||(26206320-26206389)
chr4 (218-266)||(10419722-10419770)
chr4 (388-432)||(22397295-22397339)
chr4 (388-433)||(43699470-43699517)
[»] chr7 (39 HSPs)
chr7 (388-477)||(991551-991640)
chr7 (388-477)||(16932875-16932964)
chr7 (388-477)||(16938258-16938347)
chr7 (388-475)||(14675907-14675994)
chr7 (388-477)||(16958867-16958956)
chr7 (390-477)||(1312167-1312254)
chr7 (388-477)||(23137108-23137197)
chr7 (388-477)||(22032814-22032903)
chr7 (392-477)||(22575642-22575727)
chr7 (388-477)||(19913997-19914086)
chr7 (388-477)||(28004635-28004724)
chr7 (387-474)||(7774695-7774781)
chr7 (388-475)||(20888626-20888713)
chr7 (388-473)||(35246723-35246806)
chr7 (388-474)||(44799454-44799540)
chr7 (388-475)||(47654361-47654448)
chr7 (408-476)||(25908366-25908434)
chr7 (407-462)||(24371382-24371437)
chr7 (392-478)||(43818822-43818909)
chr7 (388-470)||(43391773-43391855)
chr7 (388-474)||(48949772-48949864)
chr7 (389-468)||(32848583-32848662)
chr7 (388-481)||(12473405-12473498)
chr7 (388-477)||(29378697-29378786)
chr7 (412-477)||(29778453-29778518)
chr7 (408-477)||(33288020-33288089)
chr7 (388-477)||(44613418-44613507)
chr7 (392-456)||(14691265-14691329)
chr7 (388-468)||(18251478-18251557)
chr7 (410-462)||(48021608-48021660)
chr7 (439-474)||(1111352-1111387)
chr7 (407-474)||(25536333-25536400)
chr7 (387-478)||(35809141-35809232)
chr7 (388-462)||(17944705-17944779)
chr7 (388-474)||(29390499-29390584)
chr7 (388-474)||(2193990-2194078)
chr7 (388-449)||(16012750-16012811)
chr7 (388-477)||(46744005-46744094)
chr7 (392-477)||(47862777-47862862)
[»] chr6 (30 HSPs)
chr6 (388-477)||(32165206-32165295)
chr6 (388-477)||(10184275-10184364)
chr6 (388-475)||(32615362-32615449)
chr6 (407-477)||(22708357-22708427)
chr6 (393-477)||(1189440-1189524)
chr6 (388-477)||(1468227-1468315)
chr6 (389-477)||(4808624-4808712)
chr6 (391-475)||(32675836-32675920)
chr6 (398-477)||(34223469-34223549)
chr6 (398-477)||(9894837-9894916)
chr6 (392-477)||(29052389-29052473)
chr6 (388-474)||(21609997-21610083)
chr6 (398-475)||(2040128-2040205)
chr6 (409-477)||(6752885-6752953)
chr6 (390-477)||(9202344-9202431)
chr6 (407-462)||(10401763-10401818)
chr6 (407-474)||(17300702-17300769)
chr6 (392-450)||(15054557-15054615)
chr6 (388-477)||(6776860-6776949)
chr6 (388-477)||(10874036-10874125)
chr6 (388-445)||(34413371-34413428)
chr6 (398-462)||(1240570-1240634)
chr6 (410-473)||(23314763-23314826)
chr6 (410-473)||(23324930-23324993)
chr6 (388-462)||(8014840-8014914)
chr6 (388-481)||(10054433-10054524)
chr6 (388-474)||(17914997-17915083)
chr6 (420-477)||(12817053-12817110)
chr6 (388-429)||(13429507-13429548)
chr6 (442-474)||(15053651-15053683)
[»] chr3 (42 HSPs)
chr3 (388-477)||(29614245-29614334)
chr3 (388-477)||(3645354-3645443)
chr3 (407-480)||(1516040-1516113)
chr3 (388-474)||(20894554-20894640)
chr3 (388-477)||(40240522-40240611)
chr3 (398-471)||(29830590-29830663)
chr3 (388-471)||(37778185-37778268)
chr3 (422-488)||(12004378-12004444)
chr3 (388-462)||(53218000-53218074)
chr3 (398-474)||(42381208-42381284)
chr3 (388-477)||(4257243-4257336)
chr3 (388-475)||(42956126-42956213)
chr3 (388-478)||(38524140-38524230)
chr3 (388-468)||(20685837-20685917)
chr3 (398-474)||(42409922-42409998)
chr3 (388-475)||(47403709-47403797)
chr3 (407-478)||(25341341-25341412)
chr3 (407-477)||(17752076-17752146)
chr3 (407-477)||(19053396-19053466)
chr3 (389-455)||(37456401-37456467)
chr3 (389-478)||(20174884-20174973)
chr3 (388-478)||(28741154-28741248)
chr3 (389-474)||(36638851-36638936)
chr3 (388-432)||(585072-585116)
chr3 (409-481)||(10449050-10449122)
chr3 (408-456)||(28623222-28623270)
chr3 (398-462)||(29830718-29830782)
chr3 (408-472)||(35583670-35583734)
chr3 (430-474)||(42615039-42615083)
chr3 (398-473)||(17383573-17383647)
chr3 (387-478)||(37243517-37243608)
chr3 (389-475)||(2145609-2145695)
chr3 (388-478)||(4974363-4974453)
chr3 (412-474)||(24841334-24841396)
chr3 (389-475)||(43971794-43971880)
chr3 (412-477)||(30321675-30321739)
chr3 (388-468)||(48597820-48597901)
chr3 (388-477)||(51409445-51409533)
chr3 (389-478)||(53787696-53787785)
chr3 (389-477)||(32901093-32901181)
chr3 (388-475)||(40581023-40581111)
chr3 (388-480)||(48816767-48816859)
[»] chr1 (53 HSPs)
chr1 (388-477)||(17628370-17628459)
chr1 (392-481)||(15631960-15632049)
chr1 (392-477)||(42591438-42591523)
chr1 (388-475)||(3116009-3116096)
chr1 (388-478)||(25485800-25485890)
chr1 (388-477)||(15791435-15791524)
chr1 (388-477)||(32497217-32497306)
chr1 (390-477)||(15235106-15235193)
chr1 (408-477)||(19395846-19395915)
chr1 (388-481)||(35275839-35275932)
chr1 (406-474)||(8061957-8062025)
chr1 (388-474)||(19220225-19220311)
chr1 (388-475)||(5243351-5243438)
chr1 (407-477)||(8410204-8410274)
chr1 (387-457)||(14461006-14461076)
chr1 (388-474)||(16888914-16889000)
chr1 (407-477)||(17348949-17349019)
chr1 (415-477)||(35897564-35897626)
chr1 (388-477)||(13412399-13412487)
chr1 (388-481)||(36259232-36259325)
chr1 (391-474)||(16708854-16708937)
chr1 (388-475)||(37329359-37329446)
chr1 (388-477)||(3069799-3069888)
chr1 (388-477)||(4068167-4068256)
chr1 (388-477)||(9572729-9572818)
chr1 (388-481)||(12256659-12256751)
chr1 (388-477)||(17814242-17814331)
chr1 (388-477)||(35282539-35282628)
chr1 (398-462)||(19284960-19285024)
chr1 (417-469)||(49822817-49822869)
chr1 (398-477)||(22088354-22088429)
chr1 (388-434)||(26946092-26946138)
chr1 (388-477)||(5347206-5347295)
chr1 (388-477)||(13038999-13039088)
chr1 (388-477)||(15515292-15515381)
chr1 (388-477)||(26543025-26543114)
chr1 (388-477)||(28690056-28690145)
chr1 (388-477)||(37712119-37712208)
chr1 (388-477)||(41196655-41196744)
chr1 (388-477)||(48819351-48819440)
chr1 (388-475)||(46500947-46501035)
chr1 (407-462)||(12871435-12871490)
chr1 (390-477)||(22593352-22593439)
chr1 (297-327)||(5243499-5243529)
chr1 (388-474)||(26988200-26988286)
chr1 (388-450)||(31378723-31378785)
chr1 (388-477)||(6337701-6337790)
chr1 (408-477)||(22103181-22103250)
chr1 (407-456)||(31249753-31249802)
chr1 (388-477)||(47413424-47413513)
chr1 (389-477)||(20169317-20169405)
chr1 (391-467)||(41130049-41130125)
chr1 (388-456)||(51162321-51162389)
[»] chr8 (46 HSPs)
chr8 (407-477)||(29218196-29218266)
chr8 (388-477)||(12607131-12607220)
chr8 (388-477)||(42102158-42102247)
chr8 (388-475)||(11988248-11988335)
chr8 (392-477)||(19925613-19925698)
chr8 (388-477)||(42363262-42363351)
chr8 (388-474)||(32751189-32751276)
chr8 (388-474)||(218202-218287)
chr8 (388-474)||(694762-694847)
chr8 (388-474)||(698971-699056)
chr8 (388-474)||(731825-731910)
chr8 (388-474)||(855721-855806)
chr8 (388-477)||(37410858-37410947)
chr8 (388-477)||(38338796-38338885)
chr8 (398-477)||(35055484-35055562)
chr8 (388-477)||(38195538-38195627)
chr8 (388-468)||(38895711-38895791)
chr8 (408-477)||(25333646-25333715)
chr8 (388-478)||(24866895-24866985)
chr8 (388-478)||(31079110-31079200)
chr8 (392-477)||(3664191-3664276)
chr8 (388-468)||(32924167-32924246)
chr8 (388-478)||(2669700-2669790)
chr8 (408-477)||(25671835-25671902)
chr8 (388-474)||(32131492-32131578)
chr8 (389-477)||(24087223-24087312)
chr8 (388-477)||(32975739-32975828)
chr8 (389-476)||(31459099-31459187)
chr8 (388-480)||(36907586-36907678)
chr8 (389-477)||(42667050-42667138)
chr8 (388-475)||(14262378-14262465)
chr8 (398-481)||(16926669-16926752)
chr8 (390-477)||(25465792-25465878)
chr8 (388-478)||(28280761-28280851)
chr8 (388-426)||(35168437-35168475)
chr8 (388-474)||(41145344-41145429)
chr8 (409-474)||(2656522-2656587)
chr8 (388-477)||(16706045-16706134)
chr8 (388-477)||(16972301-16972390)
chr8 (389-474)||(23412787-23412872)
chr8 (412-477)||(32212960-32213025)
chr8 (408-477)||(34338328-34338397)
chr8 (389-477)||(14942477-14942565)
chr8 (388-436)||(25333718-25333765)
chr8 (390-478)||(30974043-30974131)
chr8 (422-478)||(34545565-34545621)
[»] chr5 (42 HSPs)
chr5 (388-474)||(29418700-29418786)
chr5 (388-477)||(15709837-15709926)
chr5 (388-481)||(41419553-41419646)
chr5 (407-475)||(26003068-26003136)
chr5 (388-477)||(4728897-4728985)
chr5 (388-477)||(16722078-16722167)
chr5 (392-477)||(38461225-38461312)
chr5 (388-470)||(5203386-5203468)
chr5 (388-478)||(29659112-29659202)
chr5 (388-477)||(28357193-28357282)
chr5 (388-480)||(28357404-28357496)
chr5 (401-459)||(6008203-6008261)
chr5 (389-475)||(33757140-33757226)
chr5 (407-481)||(43268577-43268651)
chr5 (391-468)||(11991360-11991436)
chr5 (388-477)||(27805967-27806056)
chr5 (388-475)||(28625532-28625619)
chr5 (391-477)||(2878622-2878707)
chr5 (388-462)||(43319055-43319129)
chr5 (388-477)||(780513-780602)
chr5 (407-476)||(1943066-1943135)
chr5 (408-477)||(5559864-5559933)
chr5 (388-481)||(7364250-7364343)
chr5 (388-477)||(17657294-17657383)
chr5 (388-467)||(38498622-38498699)
chr5 (392-480)||(39990632-39990720)
chr5 (407-477)||(2531381-2531452)
chr5 (388-477)||(15122596-15122678)
chr5 (407-474)||(33803754-33803821)
chr5 (388-434)||(1868898-1868944)
chr5 (388-474)||(9477388-9477474)
chr5 (388-477)||(13625465-13625555)
chr5 (389-475)||(40152823-40152909)
chr5 (388-477)||(13060547-13060636)
chr5 (408-477)||(20458503-20458572)
chr5 (388-477)||(24030267-24030355)
chr5 (388-477)||(29922134-29922223)
chr5 (388-477)||(39154706-39154795)
chr5 (407-475)||(33732374-33732442)
chr5 (389-477)||(35536898-35536985)
chr5 (399-475)||(42478889-42478965)
chr5 (389-477)||(42852075-42852162)
[»] chr2 (35 HSPs)
chr2 (388-477)||(32521991-32522080)
chr2 (398-487)||(40301421-40301509)
chr2 (388-475)||(19683625-19683711)
chr2 (391-474)||(30382217-30382300)
chr2 (388-477)||(22422114-22422203)
chr2 (407-474)||(446498-446565)
chr2 (388-481)||(5516127-5516221)
chr2 (389-475)||(21788510-21788596)
chr2 (388-468)||(10574115-10574196)
chr2 (388-477)||(22898302-22898391)
chr2 (388-477)||(23956209-23956298)
chr2 (388-477)||(32366201-32366290)
chr2 (388-462)||(17532000-17532075)
chr2 (407-477)||(2757031-2757101)
chr2 (388-474)||(17546476-17546562)
chr2 (390-478)||(15155867-15155955)
chr2 (407-478)||(35515439-35515510)
chr2 (391-477)||(736019-736105)
chr2 (388-474)||(7480847-7480932)
chr2 (388-434)||(12223904-12223950)
chr2 (388-477)||(4026977-4027066)
chr2 (388-477)||(8832509-8832598)
chr2 (439-475)||(26440196-26440232)
chr2 (388-468)||(38471745-38471825)
chr2 (388-474)||(2401570-2401656)
chr2 (388-454)||(12267049-12267115)
chr2 (388-478)||(16108066-16108156)
chr2 (408-477)||(887484-887553)
chr2 (413-482)||(31165107-31165175)
chr2 (388-477)||(33321257-33321346)
chr2 (388-477)||(36501460-36501549)
chr2 (388-425)||(37409695-37409732)
chr2 (388-481)||(42064903-42064996)
chr2 (388-468)||(29774797-29774877)
chr2 (409-477)||(38216092-38216160)
[»] scaffold0048 (2 HSPs)
scaffold0048 (396-477)||(59327-59408)
scaffold0048 (388-477)||(58813-58902)
[»] scaffold1130 (1 HSPs)
scaffold1130 (410-477)||(2325-2392)
[»] scaffold0006 (2 HSPs)
scaffold0006 (388-474)||(278941-279026)
scaffold0006 (407-471)||(40625-40689)
[»] scaffold0157 (1 HSPs)
scaffold0157 (388-477)||(24799-24888)
[»] scaffold0004 (1 HSPs)
scaffold0004 (408-477)||(242585-242654)
[»] scaffold0291 (1 HSPs)
scaffold0291 (407-477)||(19626-19696)
[»] scaffold0100 (1 HSPs)
scaffold0100 (408-477)||(38398-38467)
[»] scaffold0332 (1 HSPs)
scaffold0332 (388-475)||(14693-14780)
[»] scaffold0012 (1 HSPs)
scaffold0012 (407-474)||(178572-178640)


Alignment Details
Target: chr4 (Bit Score: 320; Significance: 1e-180; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 8 - 327
Target Start/End: Original strand, 22302767 - 22303086
Alignment:
Q  8 attttaaaggtagaaatgatcttaaaacacttctagaacaaatgatgttcatatgaatattcttgttttcaaaatgttttcataattttctaaaaacatg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22302767 attttaaaggtagaaatgatcttaaaacacttctagaacaaatgatgttcatatgaatattcttgttttcaaaatgttttcataattttctaaaaacatg 22302866  T
Q  108 ttcaaaacgacaacatataatttgtttctctcaaaaatttgagaaagtttccattgttcatacaacatttaaaagagctatagactcggtcaccatgtac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22302867 ttcaaaacgacaacatataatttgtttctctcaaaaatttgagaaagtttccattgttcatacaacatttaaaagagctatagactcggtcaccatgtac 22302966  T
Q  208 aaatttgatttaaaattaattagtgcattcaataactcaagacaattaacataaattttgtcgtcagtcacatttcgagttcgattctaagggcctgttt 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22302967 aaatttgatttaaaattaattagtgcattcaataactcaagacaattaacataaattttgtcgtcagtcacatttcgagttcgattctaagggcctgttt 22303066  T
Q  308 gaattagcttattttagagc 327  Q
    ||||||||||||||||||||    
T  22303067 gaattagcttattttagagc 22303086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 387 - 529
Target Start/End: Original strand, 22303146 - 22303288
Alignment:
Q  387 cgtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctcaaatcaaa 486  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22303146 cgtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctcaaatcaaa 22303245  T
Q  487 cgaggtttaaaacctttaagcaaaaatcataacttaatgaatt 529  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  22303246 cgaggtttaaaacctttaagcaaaaatcataacttaatgaatt 22303288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 388 - 473
Target Start/End: Complemental strand, 39931578 - 39931493
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacata 473  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| |||||||||||||||| ||||||||||    
T  39931578 gtagtttatgaaaaaaccatttatgaagatacaattttcgttagtgagagcttataaaataaaataaaaacttatttatttacata 39931493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 388 - 474
Target Start/End: Complemental strand, 4603366 - 4603280
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    |||||||||||||||||  |||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||| |||||||||||    
T  4603366 gtagtttatgaaaaaacagtttatgaagatacaattttcgttagtgagagtttataaattaaaataaaagcttatttatttacataa 4603280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 388 - 475
Target Start/End: Original strand, 47202877 - 47202964
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataag 475  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |  |||||||||||||||||| ||||  |||||| |||||    
T  47202877 gtagtttatgaaaaaaccatttatgaagatacaattttcgttagtgagatcttataaattaaaataaaagcttacttatttatataag 47202964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 42617264 - 42617175
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||   ||||||||||||  |||||| |||||||||  |||||||||||||||||||||||| ||||||||||||||    
T  42617264 gtagtttatgaaaaaatagtttatgaagatatgattttcgttagtgaaaacttataaattaaaataaaaacttatttatttacataagct 42617175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 389 - 477
Target Start/End: Original strand, 19414168 - 19414256
Alignment:
Q  389 tagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||| ||||||||| ||||| |||||||||||||| ||||||| || ||||||| |||||||||| ||||| ||||||||||||||    
T  19414168 tagtttaagaaaaaaccgtttattaagatacaattttcgttagtgagagcttataaagtaaaataaaagcttatttatttacataagct 19414256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 388 - 462
Target Start/End: Original strand, 15184598 - 15184672
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttat 462  Q
    |||||||||||||||||  |||||||||||||||||||| ||||||| |  ||||||||||||||||||||||||    
T  15184598 gtagtttatgaaaaaacagtttatgaagatacaattttcgttagtgagaacttataaattaaaataaaaacttat 15184672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 9319100 - 9319189
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||  ||||||||| |||||||||||||| |||||  ||| ||||||| |||||| ||||| ||||||||||||||    
T  9319100 gtagtttatgaaaaaacagtttatgaagctacaattttcattactgaaaacttaaaaattaacataaaagcttatttatttacataagct 9319189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 407 - 470
Target Start/End: Complemental strand, 23284806 - 23284743
Alignment:
Q  407 tttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttac 470  Q
    |||||||||||||||||||| ||||||| || |||||||||||||||||||||||| |||||||    
T  23284806 tttatgaagatacaattttcgttagtgagagcttataaattaaaataaaaacttatttatttac 23284743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 392 - 477
Target Start/End: Original strand, 19725349 - 19725435
Alignment:
Q  392 tttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaat-aaaaacttatatatttacataagct 477  Q
    |||||||||||||  | |||||||||| ||||||||||||||| || |||||||||||||| |||||||||| | ||||||||||||    
T  19725349 tttatgaaaaaacagtctatgaagatataattttcattagtgagagcttataaattaaaataaaaaacttatttttttacataagct 19725435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 389 - 478
Target Start/End: Complemental strand, 2548080 - 2547991
Alignment:
Q  389 tagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctc 478  Q
    |||||||||||||||| ||||||||||||| |||||||  || ||| |  ||||||||||| |||||||||||| ||||| |||||||||    
T  2548080 tagtttatgaaaaaacaatttatgaagataaaattttcgctaatgagaacttataaattaatataaaaacttatttatttgcataagctc 2547991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 388 - 479
Target Start/End: Original strand, 8601253 - 8601344
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctca 479  Q
    |||||||||||||||||   ||||||||||||||||||  |||||||||  ||||||||||| || ||| ||||| ||||| ||||||||||    
T  8601253 gtagtttatgaaaaaactggttatgaagatacaatttttgttagtgaaaaattataaattaacattaaagcttatttatttgcataagctca 8601344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 388 - 475
Target Start/End: Complemental strand, 46176013 - 46175926
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataag 475  Q
    ||||||||||||||||   ||||||||||||||||||||  |||| | || |||||||||||||||||  ||||| ||||||||||||    
T  46176013 gtagtttatgaaaaaatagtttatgaagatacaattttcgctagtaagagcttataaattaaaataaatgcttatttatttacataag 46175926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 388 - 474
Target Start/End: Original strand, 897022 - 897108
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    ||||||||||||||||| ||||| | |||||| |||||| |||||||||  ||||||||||| |||||| ||||| ||||| |||||    
T  897022 gtagtttatgaaaaaacaatttacgtagatacgattttcgttagtgaaaacttataaattaatataaaagcttatttatttgcataa 897108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 474
Target Start/End: Original strand, 2141698 - 2141779
Alignment:
Q  393 ttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    |||| |||||||  |||||||||||||||||||||||||| | || ||||| ||||||||| |||| ||| |||||||||||    
T  2141698 ttataaaaaaacagtttatgaagatacaattttcattagtaagagcttatagattaaaatagaaacctatgtatttacataa 2141779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 12495678 - 12495589
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||   | || |||||||||| ||||||||||| |  ||||||||||| |||||||||||| ||||| ||||||||    
T  12495678 gtagtttatgaaaaaacagctaatcaagatacaatattcattagtgagaacttataaattaacataaaaacttatttatttgcataagct 12495589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 38345856 - 38345767
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||| | |||||||||||||||||| |||||  | |  |||| |||||| |||||| ||||| ||||||||||||||    
T  38345856 gtagtttatgaaaaaacaacttatgaagatacaatttttattagccagaacttatgaattaacataaaagcttatttatttacataagct 38345767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 408 - 477
Target Start/End: Original strand, 3966801 - 3966870
Alignment:
Q  408 ttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||| |  ||||| |||| || || |||||||||||||||||||||||| ||||||||||||||    
T  3966801 ttatgaagatgcggttttcgttagcgagagcttataaattaaaataaaaacttatttatttacataagct 3966870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 481
Target Start/End: Original strand, 10046284 - 10046377
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctcaaa 481  Q
    ||||||||| |||||||   ||||||| ||||||||||| ||| |||||   |||||||||| |||||| ||||  ||||||||||||||||||    
T  10046284 gtagtttataaaaaaacaggttatgaaaatacaattttcgttattgaaaacatataaattaacataaaagcttaattatttacataagctcaaa 10046377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 17222881 - 17222970
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||   ||||||||||||||||||| ||||| | |  |||| |||||| |||||||||||| |||||  |||||||    
T  17222881 gtagtttatgaaaaaacagattatgaagatacaattttcgttagttagaacttatgaattaacataaaaacttatttatttgaataagct 17222970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 29877691 - 29877780
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||| |   ||||||||||||||||||  ||||||| |  |||| |||||| |||||| ||||||||||| ||||||||    
T  29877691 gtagtttatgaaaaagcagcttatgaagatacaatttttgttagtgagaacttatgaattaacataaaagcttatatatttgcataagct 29877780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 41228955 - 41229044
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||| | | ||||||||||||||||||||||| | |  |||| |||||| |||||| || || ||||| ||||||||    
T  41228955 gtagtttatgaaaaaacaactgatgaagatacaattttcattagttagaacttatgaattaatataaaagctaatttatttgcataagct 41229044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 477
Target Start/End: Original strand, 825735 - 825823
Alignment:
Q  389 tagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||   | ||||||||||| ||||  |||||||||| |||| |||||| |||||| ||||| ||||| ||||||||    
T  825735 tagtttatgaaaaaacagctcatgaagatacattttttgttagtgaaagcttatgaattaacataaaatcttatttatttgcataagct 825823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 460
Target Start/End: Original strand, 23335694 - 23335766
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaactt 460  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||| |  |||| |||||| ||||||||||    
T  23335694 gtagtttatgaaaaaacagcttatgaagatacaattttcataagtgagaacttatgaattaacataaaaactt 23335766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 391 - 477
Target Start/End: Complemental strand, 9153614 - 9153527
Alignment:
Q  391 gtttatgaaaaaacca-tttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||| || ||||| || ||||||||||||| ||||| | |||||||||||| ||||||  |||| ||||| ||||||||    
T  9153614 gtttatgaaaaaaacagtttattaaaatacaattttcatcagtgagaatttataaattaacataaaagtttatttatttgcataagct 9153527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 9201722 - 9201789
Alignment:
Q  408 ttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataag 475  Q
    ||||||||||   |||||| |||| || || |||||||||||||||||||||||| ||||||||||||    
T  9201722 ttatgaagatgtgattttcgttagcgagagcttataaattaaaataaaaacttatttatttacataag 9201789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 388 - 475
Target Start/End: Complemental strand, 46704304 - 46704217
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataag 475  Q
    |||||||||||||||||   ||||||||||| ||||||||||||||| |  |||| |||||| ||||||| |||  ||||| ||||||    
T  46704304 gtagtttatgaaaaaacagcttatgaagataaaattttcattagtgagaacttatgaattaatataaaaagttacttatttgcataag 46704217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 477
Target Start/End: Complemental strand, 19298157 - 19298077
Alignment:
Q  398 aaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttata--tatttacataagct 477  Q
    |||||||| |||||||| ||||||||||  ||| ||| | ||||||||||||||||||| ||||||  ||||||||||||||    
T  19298157 aaaaaaccgtttatgaa-atacaatttttgttaatgagaatttataaattaaaataaaagcttatatttatttacataagct 19298077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 477
Target Start/End: Complemental strand, 36255071 - 36254981
Alignment:
Q  387 cgtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||| |||||||||   |||||||||||||||||| |||||||| |  |||| |||||| |||||| ||||| ||| | ||||||||    
T  36255071 cgtagtttgtgaaaaaacagcttatgaagatacaattttaattagtgagaacttatgaattaacataaaagcttatttatctgcataagct 36254981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 408 - 477
Target Start/End: Original strand, 15179889 - 15179958
Alignment:
Q  408 ttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||| ||||||||||| ||||| | |  ||||| |||||||||||| ||||| ||||||||||||||    
T  15179889 ttatgaaaatacaattttcgttagtcagaacttatagattaaaataaaagcttatttatttacataagct 15179958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 18424311 - 18424223
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||| | ||||||||||||||||||||  ||| |||||  |||| |||||| |||||| ||||| ||||| ||| ||||    
T  18424311 gtagtttatgaaaaa-caatttatgaagatacaatttttgttattgaaaacttatgaattaacataaaagcttatttattttcatgagct 18424223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 18630929 - 18630840
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||   ||||||||||| | ||||| ||||||| |  |||| |||||| |||||| ||||| ||||| ||||||||    
T  18630929 gtagtttatgaaaaaacagcttatgaagataaagttttcgttagtgagaacttatgaattaatataaaagcttatttatttgcataagct 18630840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 22117405 - 22117494
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||    ||||||| || |||||||| ||||| | |  ||||| |||||||||||| ||||| ||||||||||||||    
T  22117405 gtagtttatgaaaaaatgggttatgaaaatgcaattttcgttagtcagaacttatagattaaaataaaagcttatctatttacataagct 22117494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 36740956 - 36741045
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||| ||  || ||||||||||||||||||||||||| |  |||| ||| || | |||| ||||| ||||| ||||||||    
T  36740956 gtagtttatgaaaatacagttcatgaagatacaattttcattagtgagaacttatgaatcaacacaaaagcttatttatttgcataagct 36741045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 392 - 481
Target Start/End: Complemental strand, 48238166 - 48238077
Alignment:
Q  392 tttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctcaaa 481  Q
    ||||||||||||| | ||||||| |||||||| || ||| ||||| ||||||||| || || ||||| ||| ||||| ||||| ||||||    
T  48238166 tttatgaaaaaacaacttatgaaaatacaattatctttaatgaaaatttataaataaacatgaaaacgtatttatttgcataaactcaaa 48238077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 48591458 - 48591369
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||   ||||||||||||||||||| ||| ||| |  |||| ||||||  ||||| ||||| ||||| ||||||||    
T  48591458 gtagtttatgaaaaaacagcttatgaagatacaattttcgttaatgagaacttatgaattaacgtaaaagcttatttatttgcataagct 48591369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 456
Target Start/End: Complemental strand, 11679141 - 11679093
Alignment:
Q  408 ttatgaagatacaattttcattagtgaaagtttataaattaaaataaaa 456  Q
    ||||||||||||||||||| ||||| ||| |||||||||||| ||||||    
T  11679141 ttatgaagatacaattttcgttagttaaaatttataaattaacataaaa 11679093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 456
Target Start/End: Complemental strand, 11687420 - 11687372
Alignment:
Q  408 ttatgaagatacaattttcattagtgaaagtttataaattaaaataaaa 456  Q
    ||||||||||||||||||| ||||| ||| |||||||||||| ||||||    
T  11687420 ttatgaagatacaattttcgttagttaaaatttataaattaacataaaa 11687372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 462
Target Start/End: Complemental strand, 8057122 - 8057048
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttat 462  Q
    |||| ||| |||||||| ||||||||||||||||| ||  || |||| |  ||||||||||| ||||||||||||    
T  8057122 gtagcttaagaaaaaacgatttatgaagatacaatatttgttcgtgagaacttataaattaatataaaaacttat 8057048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 474
Target Start/End: Original strand, 22273832 - 22273918
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    |||||||||||||||||   ||||||||||||||||||  ||||||| |  |||| |||||| ||||||  |||| ||||| |||||    
T  22273832 gtagtttatgaaaaaacagcttatgaagatacaatttttgttagtgagaagttatgaattaacataaaagtttatttatttgcataa 22273918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 439 - 481
Target Start/End: Complemental strand, 24101923 - 24101881
Alignment:
Q  439 ttataaattaaaataaaaacttatatatttacataagctcaaa 481  Q
    ||||||||||| |||||||||||| ||||| ||||||||||||    
T  24101923 ttataaattaacataaaaacttatttatttgcataagctcaaa 24101881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 434
Target Start/End: Complemental strand, 39932788 - 39932742
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtga 434  Q
    ||||| ||||||||||| |||||||||||||||||||  ||||||||    
T  39932788 gtagtgtatgaaaaaacaatttatgaagatacaatttctattagtga 39932742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 474
Target Start/End: Complemental strand, 42611902 - 42611817
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    ||||||||||||||||| | ||||||||||||| |||||  |||||| |  |||| |||||| |||||| ||||| ||||| |||||    
T  42611902 gtagtttatgaaaaaacaacttatgaagatacagttttc-gtagtgacaacttatgaattaacataaaagcttatttatttgcataa 42611817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 389 - 467
Target Start/End: Complemental strand, 55638114 - 55638036
Alignment:
Q  389 tagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatt 467  Q
    ||||||||||||||||  ||||| |||||||||| | | ||||||| |  ||||||||||| ||||||| |||| ||||    
T  55638114 tagtttatgaaaaaacagtttataaagatacaatctccgttagtgagaacttataaattaacataaaaatttatttatt 55638036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 488418 - 488329
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||    || | ||||||||||||| |||||||| |  |||| |||||| |||||| ||||| ||||| ||||||||    
T  488418 gtagtttatgaaaaaattgcttgtaaagatacaatttttattagtgagaacttatgaattaacataaaagcttatttatttccataagct 488329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 4398240 - 4398151
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||    ||||||||||| ||||||| ||| | ||| ||||||| |||| || |||  |||| ||||||||||||||    
T  4398240 gtagtttatgaaaaaattggttatgaagatataattttcgttaataaaaatttataatttaacattaaagtttatttatttacataagct 4398151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 456
Target Start/End: Complemental strand, 26206389 - 26206320
Alignment:
Q  387 cgtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaa 456  Q
    ||||||||||||||||||  ||||||||  ||| |||||| ||||| | |  ||||||||||||||||||    
T  26206389 cgtagtttatgaaaaaacagtttatgaatgtactattttcgttagtaagaacttataaattaaaataaaa 26206320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 10419770 - 10419722
Alignment:
Q  218 taaaattaattagtgcattcaataactcaagacaattaacataaatttt 266  Q
    |||||||||| | |||||||||  |||||| ||||||||||||||||||    
T  10419770 taaaattaatcaatgcattcaagcactcaaaacaattaacataaatttt 10419722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 388 - 432
Target Start/End: Complemental strand, 22397339 - 22397295
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagt 432  Q
    ||||||||||||||||| | ||||||| ||||||||||| |||||    
T  22397339 gtagtttatgaaaaaacaacttatgaatatacaattttcgttagt 22397295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 388 - 433
Target Start/End: Complemental strand, 43699517 - 43699470
Alignment:
Q  388 gtagtttatgaaaaaac--catttatgaagatacaattttcattagtg 433  Q
    |||||||||||||||||  |  ||||||||||||||||||||||||||    
T  43699517 gtagtttatgaaaaaacagctcttatgaagatacaattttcattagtg 43699470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 3e-31; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 991551 - 991640
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||| ||||| ||||||||||||||    
T  991551 gtagtttatgaaaaaaccatttatgaagatacacttttcgttagtgagagtttataaattaaaataaaagcttatttatttacataagct 991640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 16932964 - 16932875
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||| ||||| ||| ||||||||||    
T  16932964 gtagtttatgaaaaaaccatttatgaagatacaattttcgttagtaaaagcttataaattaaaataaaagcttatttatatacataagct 16932875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 16938347 - 16938258
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||| ||||| ||| ||||||||||    
T  16938347 gtagtttatgaaaaaaccatttatgaagatacaattttcgttagtaaaagcttataaattaaaataaaagcttatttatatacataagct 16938258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 388 - 475
Target Start/End: Complemental strand, 14675994 - 14675907
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataag 475  Q
    |||||||||||||||||  ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||| ||||    
T  14675994 gtagtttatgaaaaaacagtttatgaagatacaattttcattagcgaaagcttataaattaaaataaaaacttatttatttacgtaag 14675907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 16958867 - 16958956
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||| |||||||||||||||||||| ||||| |||| |||||||||||||||||| ||||| ||| ||||||||||    
T  16958867 gtagtttatgaaaaaaccgtttatgaagatacaattttcgttagtaaaagcttataaattaaaataaaagcttatttatatacataagct 16958956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 390 - 477
Target Start/End: Original strand, 1312167 - 1312254
Alignment:
Q  390 agtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||| |||||||| ||||| ||||||||||||| |||||||||||||||||||||  |||| ||||||||||||||    
T  1312167 agtttatgaaaaaaccgtttatgaatatacacttttcattagtgagagtttataaattaaaataaaagtttatttatttacataagct 1312254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 23137197 - 23137108
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||| ||||| | |||||||||||||||||||||||||||| || |||||||||||||||||| ||||  ||||||||||||||    
T  23137197 gtagtttatgtaaaaatcgtttatgaagatacaattttcattagtgagagcttataaattaaaataaaagcttacttatttacataagct 23137108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 22032814 - 22032903
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||| |||||||||| |||||||||| ||||||| |  ||||||||||| |||||||||||| ||||| ||||||||    
T  22032814 gtagtttatgaaaaaacaatttatgaaggtacaattttcgttagtgagaacttataaattaagataaaaacttatttatttgcataagct 22032903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 392 - 477
Target Start/End: Original strand, 22575642 - 22575727
Alignment:
Q  392 tttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||  |||||||||||||||||||| ||||| | || |||||||||||||||||||||||| ||| ||||||||||    
T  22575642 tttatgaaaaaacagtttatgaagatacaattttcgttagtaagagcttataaattaaaataaaaacttatttatctacataagct 22575727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 19913997 - 19914086
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||  |||||||||| | ||||||| ||||| |||| ||||| |||||||||||| ||||| ||||||||||||||    
T  19913997 gtagtttatgaaaaaacggtttatgaagagataattttcgttagtaaaagcttatatattaaaataaaagcttatttatttacataagct 19914086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 28004635 - 28004724
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||||||||||||||||||| |||| | ||  | || |||||||||||||||||| ||||| ||||| ||||||||    
T  28004635 gtagtttatgaaaaaaccatttatgaagatacaaatttcgtcagcaagagcttataaattaaaataaaagcttatttatttgcataagct 28004724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 387 - 474
Target Start/End: Complemental strand, 7774781 - 7774695
Alignment:
Q  387 cgtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    |||| ||||||||||||| ||||||||||||||||||||| || |||| ||||||||||||||| |||||  |||| |||||||||||    
T  7774781 cgtactttatgaaaaaac-atttatgaagatacaattttcgttggtgagagtttataaattaaattaaaagtttatttatttacataa 7774695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 388 - 475
Target Start/End: Original strand, 20888626 - 20888713
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataag 475  Q
    ||||||||||||||||| ||||||||||||||||||||| |  ||||||  ||||||||||| |||||||||||  ||||| ||||||    
T  20888626 gtagtttatgaaaaaacaatttatgaagatacaattttcttccgtgaaaacttataaattaacataaaaacttacttatttgcataag 20888713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 388 - 473
Target Start/End: Original strand, 35246723 - 35246806
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacata 473  Q
    |||||||||||||||||  ||||||| |||||||||||| |||||||  | |||||||||||||||||| ||||| ||||||||||    
T  35246723 gtagtttatgaaaaaac--tttatgaggatacaattttcgttagtgagggcttataaattaaaataaaagcttatttatttacata 35246806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 388 - 474
Target Start/End: Original strand, 44799454 - 44799540
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    ||||||| ||||||||   |||||||||||| ||| ||| ||||||| || |||||||||||||||||||||||| |||||||||||    
T  44799454 gtagtttttgaaaaaatagtttatgaagatagaatattcgttagtgagagcttataaattaaaataaaaacttatttatttacataa 44799540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 388 - 475
Target Start/End: Complemental strand, 47654448 - 47654361
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataag 475  Q
    |||||||||||||||||  ||||||||| |||||||||| ||||||| |  |||| |||||| |||||||||||| ||||| ||||||    
T  47654448 gtagtttatgaaaaaacagtttatgaaggtacaattttcgttagtgagaacttatgaattaagataaaaacttatttatttgcataag 47654361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 408 - 476
Target Start/End: Original strand, 25908366 - 25908434
Alignment:
Q  408 ttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagc 476  Q
    ||||||||||||||||||| || ||||||  ||||||||||| |||||||||||| ||||| |||||||    
T  25908366 ttatgaagatacaattttcgtttgtgaaaagttataaattaacataaaaacttatttatttgcataagc 25908434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 407 - 462
Target Start/End: Complemental strand, 24371437 - 24371382
Alignment:
Q  407 tttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttat 462  Q
    |||||||||||||||||||| ||||||| || ||||||| ||||||||||||||||    
T  24371437 tttatgaagatacaattttcgttagtgagagcttataaaataaaataaaaacttat 24371382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 478
Target Start/End: Complemental strand, 43818909 - 43818822
Alignment:
Q  392 tttatgaaaaaaccatttatgaagat-acaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctc 478  Q
    |||||||||||||  ||||||||| | ||||||||||||||||| |  |||| |||||| |||||||||||| ||||| |||||||||    
T  43818909 tttatgaaaaaacagtttatgaaggttacaattttcattagtgagaacttatgaattaagataaaaacttatttatttgcataagctc 43818822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 388 - 470
Target Start/End: Original strand, 43391773 - 43391855
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttac 470  Q
    ||||||||||||||||  ||||||||||||| ||||||  || ||||||  |||||||| || |||||||||||| |||||||    
T  43391773 gtagtttatgaaaaaataatttatgaagatataatttttgtttgtgaaaacttataaataaatataaaaacttatttatttac 43391855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 474
Target Start/End: Original strand, 48949772 - 48949864
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtt------tataaattaaaataaaaacttatatatttacataa 474  Q
    |||||||||||||||||  |||||||||||| ||| ||| |||||||| | |      ||||||||||||||||||||||| |||||||||||    
T  48949772 gtagtttatgaaaaaacagtttatgaagatataatattcgttagtgaaggcttataaatataaattaaaataaaaacttatttatttacataa 48949864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 389 - 468
Target Start/End: Original strand, 32848583 - 32848662
Alignment:
Q  389 tagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatattt 468  Q
    |||||||||| |||||  || ||||| | ||||||||||||||| ||| |||||||||||| |||||| ||||| |||||    
T  32848583 tagtttatgataaaacagttcatgaatacacaattttcattagttaaaatttataaattaacataaaaccttatttattt 32848662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 481
Target Start/End: Original strand, 12473405 - 12473498
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctcaaa 481  Q
    |||||||||||||||||  ||||| |||| ||||||||| || |||| |  ||||||||||| ||| || ||||| |||||  |||||||||||    
T  12473405 gtagtttatgaaaaaacagtttataaagaaacaattttcgtttgtgagaacttataaattaatatataagcttatttatttgaataagctcaaa 12473498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 29378697 - 29378786
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||   ||||||||||||||||||| ||||| | |  |||| ||||||  ||||| ||||| ||||| ||||||||    
T  29378697 gtagtttatgaaaaaacagcttatgaagatacaattttcgttagtaagaacttatgaattaacgtaaaagcttatttatttgcataagct 29378786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 412 - 477
Target Start/End: Complemental strand, 29778518 - 29778453
Alignment:
Q  412 gaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||  |||||||||||||||| |||||||| ||| ||||||| |||| ||||| ||||||||    
T  29778518 gaagatatcattttcattagtgaaaatttataaactaatataaaaatttatttatttgcataagct 29778453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 408 - 477
Target Start/End: Complemental strand, 33288089 - 33288020
Alignment:
Q  408 ttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||| ||||| |||||||||  |||| |||||| |||||||||||| |||||  |||||||    
T  33288089 ttatgaagatacagttttcgttagtgaaaacttatgaattaacataaaaacttatttatttggataagct 33288020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 44613507 - 44613418
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||| | |||||| ||||||||||| |||| | | |  |||| |||||| |||||| ||||| ||||| ||||||||    
T  44613507 gtagtttatgaaaaaacaacttatgacgatacaatttttattaattagaacttatgaattaatataaaagcttatttatttgcataagct 44613418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 456
Target Start/End: Complemental strand, 14691329 - 14691265
Alignment:
Q  392 tttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaa 456  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||| |  |||| |||||| ||||||    
T  14691329 tttatgaaaaaacaatttatgaagatataattttcgttagtgagaacttatgaattaacataaaa 14691265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 468
Target Start/End: Complemental strand, 18251557 - 18251478
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatattt 468  Q
    ||||||||||||||| | ||||||||| ||||||||||| ||||  |||  ||||||||||| ||||||| |||| |||||    
T  18251557 gtagtttatgaaaaa-caatttatgaatatacaattttcgttagcaaaatcttataaattaacataaaaatttatttattt 18251478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 410 - 462
Target Start/End: Complemental strand, 48021660 - 48021608
Alignment:
Q  410 atgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttat 462  Q
    |||||||||||||||||||||||||||  |||| |||||| ||||||| ||||    
T  48021660 atgaagatacaattttcattagtgaaaacttatgaattaatataaaaaattat 48021608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 439 - 474
Target Start/End: Original strand, 1111352 - 1111387
Alignment:
Q  439 ttataaattaaaataaaaacttatatatttacataa 474  Q
    |||||||||||||||||||||||| |||||||||||    
T  1111352 ttataaattaaaataaaaacttatttatttacataa 1111387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 474
Target Start/End: Original strand, 25536333 - 25536400
Alignment:
Q  407 tttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    |||||||||| | ||||||| ||| ||| || ||| ||||||||||||||| |||| |||||||||||    
T  25536333 tttatgaagacataattttcgttaatgatagcttacaaattaaaataaaaatttatctatttacataa 25536400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 478
Target Start/End: Original strand, 35809141 - 35809232
Alignment:
Q  387 cgtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctc 478  Q
    |||||||||||||||||| | ||| ||| |||||||||||   ||| | | ||||| |||||| |||||| ||||  |||||||||||||||    
T  35809141 cgtagtttatgaaaaaacaacttaagaatatacaattttcgccagtaagattttatgaattaacataaaagcttaattatttacataagctc 35809232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 462
Target Start/End: Original strand, 17944705 - 17944779
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttat 462  Q
    |||||||||  |||||| | |||||||||||||| || ||||||||| |  ||||||||||| | ||||||||||    
T  17944705 gtagtttatagaaaaacaacttatgaagatacaaattacattagtgagaacttataaattaacacaaaaacttat 17944779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 474
Target Start/End: Complemental strand, 29390584 - 29390499
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    ||||||||||||||| | | ||||||||||||||||||| ||||  | | ||||| |||||| |||||| ||||| ||||| |||||    
T  29390584 gtagtttatgaaaaa-caacttatgaagatacaattttcgttagctagaatttatgaattaacataaaagcttatttatttgcataa 29390499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 474
Target Start/End: Complemental strand, 2194078 - 2193990
Alignment:
Q  388 gtagtttatgaaaaaacc--atttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    ||||||||||||||||    ||||||||||||| ||||||| ||||| | |  |||||||||||||||||||  ||| |||||| ||||    
T  2194078 gtagtttatgaaaaaaaataatttatgaagatataattttcgttagttagaacttataaattaaaataaaaatctatctatttatataa 2193990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 449
Target Start/End: Original strand, 16012750 - 16012811
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaa 449  Q
    |||||||||||||||||   || |||||||||||||||| |||||||||  |||| ||||||    
T  16012750 gtagtttatgaaaaaactgcttctgaagatacaattttcgttagtgaaaacttatgaattaa 16012811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 46744005 - 46744094
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||| ||||||||||    |||||||||||||||||| ||||||| |  |||  |||||| |||||| ||||| ||||| ||||||||    
T  46744005 gtagttaatgaaaaaacagcatatgaagatacaattttcgttagtgagaacttacgaattaacataaaagcttatttattttcataagct 46744094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 477
Target Start/End: Original strand, 47862777 - 47862862
Alignment:
Q  392 tttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||  |||||| || ||||||||||| ||| | |||  |||| |||||| ||||||| |||  ||||||||||||||    
T  47862777 tttatgaaaaaataatttataaatatacaattttcgttaataaaatcttatgaattaacataaaaatttaattatttacataagct 47862862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 6e-29; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 32165295 - 32165206
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||  |||||||||||||||||||| ||||||| || |||||||||||||||||||||||| ||||||||||||||    
T  32165295 gtagtttatgaaaaaacagtttatgaagatacaattttcgttagtgagagcttataaattaaaataaaaacttatttatttacataagct 32165206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 10184364 - 10184275
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||| ||||||||||| ||||||||| ||||| | || |||||||||||||||||| ||||| |||||| |||||||    
T  10184364 gtagtttatgaaaaaacaatttatgaagaaacaattttcgttagtaagagcttataaattaaaataaaagcttatttatttatataagct 10184275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 388 - 475
Target Start/End: Complemental strand, 32615449 - 32615362
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataag 475  Q
    |||||| |||||||||| ||||||||||||||||||||| ||||||| ||  ||||||||||||||||| ||||  ||||||||||||    
T  32615449 gtagttgatgaaaaaactatttatgaagatacaattttcgttagtgagagcatataaattaaaataaaagcttacttatttacataag 32615362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 407 - 477
Target Start/End: Original strand, 22708357 - 22708427
Alignment:
Q  407 tttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||||| ||||||  ||||||||||||||||||||||||||| ||||| ||||||||    
T  22708357 tttatgaagatacaattttcgttagtgggagtttataaattaaaataaaaacttatttatttgcataagct 22708427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 393 - 477
Target Start/End: Original strand, 1189440 - 1189524
Alignment:
Q  393 ttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||| ||||||  |||||||||||||| ||||| ||||||| ||||||||||||||||| ||| ||||| ||||||||||||||    
T  1189440 ttatgcaaaaactgtttatgaagatacacttttcgttagtgagagtttataaattaaaattaaagcttatttatttacataagct 1189524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 1468227 - 1468315
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||| |  |||||||||| || |||||| ||||| | || |||||||||||||||||||||||| ||||||||||||||    
T  1468227 gtagtttatgaaaaa-cagtttatgaagaaaccattttcgttagtaagagcttataaattaaaataaaaacttatttatttacataagct 1468315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 389 - 477
Target Start/End: Original strand, 4808624 - 4808712
Alignment:
Q  389 tagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||  |||||||||||||||| ||| ||||| |  | |||||||||||||||||||||||  ||| ||||||||||    
T  4808624 tagtttatgaaaaaacagtttatgaagatacaatattcgttagtaagggcttataaattaaaataaaaacttacttatatacataagct 4808712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 391 - 475
Target Start/End: Complemental strand, 32675920 - 32675836
Alignment:
Q  391 gtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataag 475  Q
    |||||||||||||  | ||||||||||||||||||||||||||| |  |||| |||||| |||||||||||| ||||| ||||||    
T  32675920 gtttatgaaaaaataacttatgaagatacaattttcattagtgagaacttatgaattaatataaaaacttatttatttgcataag 32675836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 398 - 477
Target Start/End: Complemental strand, 34223549 - 34223469
Alignment:
Q  398 aaaaaaccatttatgaagatacaattttca-ttagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||  |||||||||||||||||||   ||||||| || |||||||||||||||||||||||| ||||||||||||||    
T  34223549 aaaaaacagtttatgaagatacaattttttgttagtgagagcttataaattaaaataaaaacttatttatttacataagct 34223469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 398 - 477
Target Start/End: Original strand, 9894837 - 9894916
Alignment:
Q  398 aaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||  ||||||||  |||||||||| ||| ||| || |||||||||||||||||||||||| ||||||||||||||    
T  9894837 aaaaaacagtttatgaatttacaattttcgttattgagagcttataaattaaaataaaaacttatttatttacataagct 9894916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 392 - 477
Target Start/End: Original strand, 29052389 - 29052473
Alignment:
Q  392 tttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||  ||||||| ||||||||| || || |||| || |||||||||||||| ||||||||| ||||||||||||||    
T  29052389 tttatgaaaaaacagtttatgatgatacaattctcgtttgtgagagcttataaattaaaat-aaaacttatttatttacataagct 29052473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 388 - 474
Target Start/End: Complemental strand, 21610083 - 21609997
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    ||||||||||||||||   |||||||| ||| ||||||| ||||| | |  |||||||||||||||||||||||| ||||| |||||    
T  21610083 gtagtttatgaaaaaatagtttatgaatatataattttcgttagtaagaacttataaattaaaataaaaacttatttatttgcataa 21609997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 398 - 475
Target Start/End: Complemental strand, 2040205 - 2040128
Alignment:
Q  398 aaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataag 475  Q
    ||||||| |||||| ||| |||||||||||||||| | |  ||||||||||| |||||||||||| ||||| ||||||    
T  2040205 aaaaaacaatttataaagttacaattttcattagttagaacttataaattaatataaaaacttatttatttgcataag 2040128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 409 - 477
Target Start/End: Original strand, 6752885 - 6752953
Alignment:
Q  409 tatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||||||||||||   ||||| |||||| |||||| ||||| ||||| ||||||||    
T  6752885 tatgaagatacaattttcattagtgaggatttatgaattaatataaaagcttatttatttgcataagct 6752953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 390 - 477
Target Start/End: Complemental strand, 9202431 - 9202344
Alignment:
Q  390 agtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||    ||||||||||||||||| |||||||| |  |||| |||||| |||||| ||||| |||| |||||||||    
T  9202431 agtttatgaaaaaacagcatatgaagatacaatttttattagtgataacttatgaattaacataaaagcttatttattaacataagct 9202344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 407 - 462
Target Start/End: Complemental strand, 10401818 - 10401763
Alignment:
Q  407 tttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttat 462  Q
    ||||| |||||||||||||| ||||| | || ||||||||||||||||||||||||    
T  10401818 tttatcaagatacaattttcgttagtaagagcttataaattaaaataaaaacttat 10401763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 407 - 474
Target Start/End: Complemental strand, 17300769 - 17300702
Alignment:
Q  407 tttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    |||||||| |||||| |||| ||||||| |  ||||||||||||||||||| |||| |||||||||||    
T  17300769 tttatgaatatacaactttcgttagtgacaacttataaattaaaataaaaagttatttatttacataa 17300702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 450
Target Start/End: Complemental strand, 15054615 - 15054557
Alignment:
Q  392 tttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaa 450  Q
    ||||||||||| | ||||||||||||||||||||| ||||| |||  ||||||||||||    
T  15054615 tttatgaaaaagcaatttatgaagatacaattttcgttagttaaaacttataaattaaa 15054557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 6776860 - 6776949
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||| |||||  | |||||||||||||| |||||||||||| |  | |||  |||| |||||||||||| ||||| ||||||||    
T  6776860 gtagtttatggaaaaataacttatgaagatacaaatttcattagtgagaactgatactttaatataaaaacttatttatttgcataagct 6776949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 10874036 - 10874125
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||| |||||   ||||||||||||||||||  || ||||||  |||| |||||| |||||| ||||| ||||| ||||||||    
T  10874036 gtagtttatgagaaaacagcttatgaagatacaattttagttggtgaaaacttatgaattaacataaaagcttatttatttgcataagct 10874125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 445
Target Start/End: Original strand, 34413371 - 34413428
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaa 445  Q
    ||||||||||||||||| |||||| || ||||||||||  ||||||||| ||||||||    
T  34413371 gtagtttatgaaaaaacaatttataaacatacaattttatttagtgaaaatttataaa 34413428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 462
Target Start/End: Complemental strand, 1240634 - 1240570
Alignment:
Q  398 aaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttat 462  Q
    ||||||| | |||||||||||| |||||||||||||| | |||||  ||||||||||||| ||||    
T  1240634 aaaaaacaacttatgaagatacgattttcattagtgagaatttatgtattaaaataaaaatttat 1240570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 473
Target Start/End: Complemental strand, 23314826 - 23314763
Alignment:
Q  410 atgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacata 473  Q
    ||||| ||||| ||||| ||||| | || |||||||||||||||||| |||| |||||||||||    
T  23314826 atgaatatacagttttcgttagtcagagcttataaattaaaataaaagcttacatatttacata 23314763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 473
Target Start/End: Complemental strand, 23324993 - 23324930
Alignment:
Q  410 atgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacata 473  Q
    ||||| ||||| ||||| ||||| | || |||||||||||||||||| |||| |||||||||||    
T  23324993 atgaatatacagttttcgttagtcagagcttataaattaaaataaaagcttacatatttacata 23324930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 462
Target Start/End: Original strand, 8014840 - 8014914
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttat 462  Q
    |||||||||||||||||    |||||||||||||||||  |||||||||  | ||||||||| |||||| |||||    
T  8014840 gtagtttatgaaaaaactgcatatgaagatacaattttggttagtgaaaactgataaattaacataaaagcttat 8014914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 481
Target Start/End: Original strand, 10054433 - 10054524
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctcaaa 481  Q
    ||||||||||||||||  ||||||  ||||||||||||||||||||  |  ||| ||||||  |||||| | ||| ||||| ||||||||||||    
T  10054433 gtagtttatgaaaaaataatttat--agatacaattttcattagtgggaacttacaaattagcataaaagcctatttatttgcataagctcaaa 10054524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 474
Target Start/End: Original strand, 17914997 - 17915083
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    ||||||||||||||||    ||||||| ||||||||||| ||||| | |  ||||| |||||||||||| ||||| |||||| ||||    
T  17914997 gtagtttatgaaaaaatgggttatgaaaatacaattttcgttagtcagaacttatagattaaaataaaagcttatttatttatataa 17915083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 477
Target Start/End: Complemental strand, 12817110 - 12817053
Alignment:
Q  420 aattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||   |||||||||| |||||| ||||| ||||| ||||||||    
T  12817110 aattttcattagtgaaaacatataaattaacataaaagcttatttatttgcataagct 12817053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 429
Target Start/End: Original strand, 13429507 - 13429548
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcatt 429  Q
    |||||||||||||||||  ||||||| |||||||||||||||    
T  13429507 gtagtttatgaaaaaacagtttatgaggatacaattttcatt 13429548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 474
Target Start/End: Complemental strand, 15053683 - 15053651
Alignment:
Q  442 taaattaaaataaaaacttatatatttacataa 474  Q
    ||||||||||||||||||||| |||||||||||    
T  15053683 taaattaaaataaaaacttatttatttacataa 15053651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 2e-26; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 29614245 - 29614334
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||  |||||||||||||||||||| ||||||| || ||||||||||||||| |||||||| ||||||||||||||    
T  29614245 gtagtttatgaaaaaacagtttatgaagatacaattttcgttagtgagagcttataaattaaaatataaacttatttatttacataagct 29614334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 3645354 - 3645443
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||  || ||||||||||||||||| ||||||| || ||||||||||||||| |||||||| ||||||||||||||    
T  3645354 gtagtttatgaaaaaacagttcatgaagatacaattttcgttagtgagagcttataaattaaaatataaacttatttatttacataagct 3645443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 407 - 480
Target Start/End: Complemental strand, 1516113 - 1516040
Alignment:
Q  407 tttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctcaa 480  Q
    ||||| |||||||||||||||||||||| |  |||||||||||||||||||||||| |||||||||||||||||    
T  1516113 tttataaagatacaattttcattagtgagaacttataaattaaaataaaaacttatttatttacataagctcaa 1516040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 388 - 474
Target Start/End: Original strand, 20894554 - 20894640
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    ||||||| |||||||||  || ||||||||||||||||| ||||||| || ||||||||||||||| |||||||| |||||||||||    
T  20894554 gtagtttttgaaaaaacagttcatgaagatacaattttcgttagtgagagcttataaattaaaatataaacttatttatttacataa 20894640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 40240611 - 40240522
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||| | ||||||||||||||||||| ||||||| || |||| |||||| |||||| ||||| ||||| ||||||||    
T  40240611 gtagtttatgaaaaaacaacttatgaagatacaattttcgttagtgagagcttatgaattaagataaaagcttatttatttgcataagct 40240522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 398 - 471
Target Start/End: Complemental strand, 29830663 - 29830590
Alignment:
Q  398 aaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttaca 471  Q
    |||||||  |||||||||||||||||||| ||||||| |  |||||||||||||||||||||||| ||||||||    
T  29830663 aaaaaacagtttatgaagatacaattttcgttagtgagaacttataaattaaaataaaaacttatttatttaca 29830590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 388 - 471
Target Start/End: Original strand, 37778185 - 37778268
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttaca 471  Q
    |||||||||||||||| |  ||||||||||||||||||  ||||||| |  |||||||||||||||||| ||||| ||||||||    
T  37778185 gtagtttatgaaaaaatcggttatgaagatacaatttttgttagtgagaacttataaattaaaataaaagcttatttatttaca 37778268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 422 - 488
Target Start/End: Original strand, 12004378 - 12004444
Alignment:
Q  422 ttttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctcaaatcaaacg 488  Q
    ||||| || |||| ||||||||||||||||||||| ||||| |||||||||||||||||| ||||||    
T  12004378 ttttctttcgtgagagtttataaattaaaataaaagcttatttatttacataagctcaaaccaaacg 12004444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 388 - 462
Target Start/End: Complemental strand, 53218074 - 53218000
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttat 462  Q
    ||||||||||||||||| | || |||||||||||||||| ||||||| |  |||||||||||||||||| |||||    
T  53218074 gtagtttatgaaaaaacaacttttgaagatacaattttcgttagtgagaacttataaattaaaataaaagcttat 53218000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 398 - 474
Target Start/End: Complemental strand, 42381284 - 42381208
Alignment:
Q  398 aaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    |||||||  |||||||||||| ||||||| ||||| | || |||||||||||||||||||||||  |||||||||||    
T  42381284 aaaaaacagtttatgaagataaaattttcgttagtaagagcttataaattaaaataaaaacttaattatttacataa 42381208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 4257336 - 4257243
Alignment:
Q  388 gtagtttatgaaaaaa--ccatttatgaagatacaattttcattagtgaaagtttataaattaaaataa--aaacttatatatttacataagct 477  Q
    ||||||||||||||||  |  ||||||||||||||||||||  |||||| || ||||||||||||| ||  |||||||| ||||||||||||||    
T  4257336 gtagtttatgaaaaaaaacagtttatgaagatacaattttcgctagtgagagcttataaattaaaaaaaacaaacttatttatttacataagct 4257243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 388 - 475
Target Start/End: Complemental strand, 42956213 - 42956126
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataag 475  Q
    ||||||||||| |||||   |||| |||||||||||||| ||||||| |  ||||||||||| |||||||||||| ||||| ||||||    
T  42956213 gtagtttatgataaaacagcttataaagatacaattttcgttagtgagaacttataaattaacataaaaacttatttatttgcataag 42956126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 388 - 478
Target Start/End: Original strand, 38524140 - 38524230
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctc 478  Q
    |||||||||||||||| |||||||||| || |||||||| ||||| | |  |||| |||||| |||||| ||||| ||||| |||||||||    
T  38524140 gtagtttatgaaaaaatcatttatgaatatgcaattttcgttagtaagatcttatgaattaacataaaagcttatttatttgcataagctc 38524230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 468
Target Start/End: Original strand, 20685837 - 20685917
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatattt 468  Q
    ||||||||| ||||||| | ||||||||||||||||||||||||||| |  || | |||||  |||||||||||| |||||    
T  20685837 gtagtttatcaaaaaacaacttatgaagatacaattttcattagtgagaacttgtgaattatcataaaaacttatttattt 20685917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 398 - 474
Target Start/End: Complemental strand, 42409998 - 42409922
Alignment:
Q  398 aaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    |||||||  |||||||||||| |||| || ||||| | || |||||||||||||||||||||||  |||||||||||    
T  42409998 aaaaaacagtttatgaagataaaattctcgttagtaagagcttataaattaaaataaaaacttaattatttacataa 42409922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 475
Target Start/End: Complemental strand, 47403797 - 47403709
Alignment:
Q  388 gtagtttatg-aaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataag 475  Q
    |||||||||| ||||||  ||||||||||||||||||||| || ||||  | ||||||||||| ||||||| |||| ||||| ||||||    
T  47403797 gtagtttatgcaaaaaataatttatgaagatacaattttcgtttgtgagggcttataaattaacataaaaatttatttatttgcataag 47403709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 407 - 478
Target Start/End: Original strand, 25341341 - 25341412
Alignment:
Q  407 tttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctc 478  Q
    |||||||||||| ||||||| |||| ||||  || | |||||| |||||||||||| |||||||||||||||    
T  25341341 tttatgaagataaaattttcgttagggaaaacttgtgaattaatataaaaacttatttatttacataagctc 25341412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 407 - 477
Target Start/End: Complemental strand, 17752146 - 17752076
Alignment:
Q  407 tttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||||| ||||| | |  ||||||||||| ||||||  |||| ||||||||||||||    
T  17752146 tttatgaagatacaattttcgttagtaagaacttataaattaacataaaagtttatttatttacataagct 17752076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 407 - 477
Target Start/End: Complemental strand, 19053466 - 19053396
Alignment:
Q  407 tttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||||| ||||| | |  ||||||||||| ||||||  |||| ||||||||||||||    
T  19053466 tttatgaagatacaattttcgttagtaagaacttataaattaacataaaagtttatttatttacataagct 19053396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 455
Target Start/End: Complemental strand, 37456467 - 37456401
Alignment:
Q  389 tagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaa 455  Q
    |||||||||||||||  |||||| |||||||||||||  ||||| | | ||||||||||||||||||    
T  37456467 tagtttatgaaaaaataatttataaagatacaatttttgttagtaagaatttataaattaaaataaa 37456401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 389 - 478
Target Start/End: Complemental strand, 20174973 - 20174884
Alignment:
Q  389 tagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctc 478  Q
    |||||||||||||||| | ||||||| ||||||||||| ||||| | |  |||| |||||  |||||| ||||| ||||| |||||||||    
T  20174973 tagtttatgaaaaaacaacttatgaatatacaattttcgttagtaagatcttatgaattagcataaaagcttatttatttgcataagctc 20174884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 478
Target Start/End: Complemental strand, 28741248 - 28741154
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaatta----aaataaaaacttatatatttacataagctc 478  Q
    |||||||||||||||||   |||||||| |||||||||| ||||||| |  |||| |||||    ||| |||||||||| |||||||||||||||    
T  28741248 gtagtttatgaaaaaacagattatgaaggtacaattttcgttagtgagaacttatgaattaagataaaaaaaaacttatttatttacataagctc 28741154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 389 - 474
Target Start/End: Complemental strand, 36638936 - 36638851
Alignment:
Q  389 tagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    |||||||||| ||||| |||| | || ||| ||||||| ||| |||||  ||||||||||| ||||||||| || |||||||||||    
T  36638936 tagtttatgacaaaacaatttttaaatatataattttcgttattgaaaacttataaattaacataaaaactcatttatttacataa 36638851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 432
Target Start/End: Original strand, 585072 - 585116
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagt 432  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||    
T  585072 gtagtttatgaaaaaacaacttatgaagatacaattttcgttagt 585116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 409 - 481
Target Start/End: Original strand, 10449050 - 10449122
Alignment:
Q  409 tatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctcaaa 481  Q
    ||||||| || ||||||| ||||||| |  |||| |||||| |||||||||||| ||||| ||||||||||||    
T  10449050 tatgaaggtataattttcgttagtgagaacttatgaattaagataaaaacttatttatttgcataagctcaaa 10449122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 456
Target Start/End: Complemental strand, 28623270 - 28623222
Alignment:
Q  408 ttatgaagatacaattttcattagtgaaagtttataaattaaaataaaa 456  Q
    ||||||||||||||||||| ||| ||  |||||||||||||||||||||    
T  28623270 ttatgaagatacaattttcgttattgggagtttataaattaaaataaaa 28623222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 462
Target Start/End: Complemental strand, 29830782 - 29830718
Alignment:
Q  398 aaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttat 462  Q
    |||||||  |||||||||||||||||||  ||| ||| |  ||||||||||||||||||||||||    
T  29830782 aaaaaacagtttatgaagatacaatttttgttactgagaacttataaattaaaataaaaacttat 29830718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 472
Target Start/End: Complemental strand, 35583734 - 35583670
Alignment:
Q  408 ttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacat 472  Q
    ||||||||||||||||||  ||||||||   ||||||||||| ||||||| |||| |||||||||    
T  35583734 ttatgaagatacaattttagttagtgaagacttataaattaacataaaaatttatttatttacat 35583670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 474
Target Start/End: Complemental strand, 42615083 - 42615039
Alignment:
Q  430 agtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    ||||| ||||||||||||||||| ||||||||| |||||||||||    
T  42615083 agtgagagtttataaattaaaatgaaaacttatttatttacataa 42615039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 473
Target Start/End: Original strand, 17383573 - 17383647
Alignment:
Q  398 aaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacata 473  Q
    ||||||| | ||||||||||| ||||||| |||||||  | ||||| |||||||||||||||| | ||||||||||    
T  17383573 aaaaaacaacttatgaagatataattttcgttagtgag-gcttatacattaaaataaaaacttttttatttacata 17383647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 478
Target Start/End: Original strand, 37243517 - 37243608
Alignment:
Q  387 cgtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctc 478  Q
    |||||||||||||||||   ||||||||| |||| |||||||| |||| |  |||| |||||| |||||| ||||  ||||| |||||||||    
T  37243517 cgtagtttatgaaaaaatagtttatgaaggtacacttttcattggtgagaacttatgaattaagataaaagcttacttatttgcataagctc 37243608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 389 - 475
Target Start/End: Complemental strand, 2145695 - 2145609
Alignment:
Q  389 tagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataag 475  Q
    |||||| ||||||||   ||||||||||| || ||||  ||| |||||  ||||||||||| |||||||||||| ||||| ||||||    
T  2145695 tagtttgtgaaaaaattgtttatgaagattcactttttgttaatgaaatcttataaattaacataaaaacttatttatttgcataag 2145609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 478
Target Start/End: Original strand, 4974363 - 4974453
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctc 478  Q
    ||||||||||||||||| | ||||||| ||||||| ||  || || |||  |||| |||||| |||||| ||||| ||||| |||||||||    
T  4974363 gtagtttatgaaaaaacaagttatgaatatacaatatttgttggtaaaatcttatgaattaacataaaagcttatttatttgcataagctc 4974453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 474
Target Start/End: Complemental strand, 24841396 - 24841334
Alignment:
Q  412 gaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    ||||||||||||||| ||  ||| || ||||||||||||||||||| |||| | |||||||||    
T  24841396 gaagatacaattttcgtttttgagagcttataaattaaaataaaaatttatttgtttacataa 24841334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 389 - 475
Target Start/End: Complemental strand, 43971880 - 43971794
Alignment:
Q  389 tagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataag 475  Q
    |||||||||| ||||| ||||||||||||| ||||||| ||||||| |  |||||  ||||  ||||||| ||| ||||| ||||||    
T  43971880 tagtttatgagaaaacaatttatgaagataaaattttcgttagtgagaacttatattttaatttaaaaacatatttatttgcataag 43971794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 477
Target Start/End: Complemental strand, 30321739 - 30321675
Alignment:
Q  412 gaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||| ||||||  ||||||||| |||||||  ||||| ||||| ||||||||    
T  30321739 gaagatacaattttcattggtgaaaacttataaatt-aaataaaggcttatttatttgcataagct 30321675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 468
Target Start/End: Complemental strand, 48597901 - 48597820
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtga-aagtttataaattaaaataaaaacttatatattt 468  Q
    ||||| ||||||||||| | ||||||||||||||||||| | ||||| || || || |||||| |||||| ||||| |||||    
T  48597901 gtagtgtatgaaaaaacaacttatgaagatacaattttcgtcagtgagaacttaatgaattaacataaaagcttatttattt 48597820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 51409445 - 51409533
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||| | ||||||||||| ||||| || || |||||  |||| |||||| || ||||||||| |||||  |||||||    
T  51409445 gtagtttatgaaaaaacaacttatgaagataaaatttccaatactgaaaaattatgaattaatat-aaaacttatttatttgtataagct 51409533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 478
Target Start/End: Complemental strand, 53787785 - 53787696
Alignment:
Q  389 tagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctc 478  Q
    ||||||| ||||||||  ||||| |||||| ||||||  ||| ||| |  |||| |||||| |||||||||||| ||||| |||||||||    
T  53787785 tagtttacgaaaaaacagtttataaagatataatttttgttattgagaacttatgaattaagataaaaacttatttatttgcataagctc 53787696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 477
Target Start/End: Complemental strand, 32901181 - 32901093
Alignment:
Q  389 tagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||| | ||||| | ||||||||||| ||||||| ||||||| |  |||||  |||| |||||||| ||| ||||| ||||||||    
T  32901181 tagtttataagaaaacaacttatgaagataaaattttcgttagtgagaacttatattttaatataaaaacatatttatttgcataagct 32901093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 388 - 475
Target Start/End: Complemental strand, 40581111 - 40581023
Alignment:
Q  388 gtagtttatgaaaaaacca-tttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataag 475  Q
    |||||||||||||||| ||   |||||||| ||||||||| ||||||| |  |||| |||||| |||||| ||||| ||||| ||||||    
T  40581111 gtagtttatgaaaaaaacagcgtatgaagaaacaattttcgttagtgagaacttatgaattaacataaaatcttatttatttgcataag 40581023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 388 - 480
Target Start/End: Original strand, 48816767 - 48816859
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctcaa 480  Q
    |||||||| ||| |||| | ||||||| ||||||||||| || || | |  |||||||||||  ||||| ||||| ||||| |||||||||||    
T  48816767 gtagtttaagaataaacaacttatgaatatacaattttcgttggtaagatcttataaattaacttaaaagcttatttatttgcataagctcaa 48816859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 2e-26; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 17628459 - 17628370
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||| || || ||||||||||||||| ||||| ||||||||||||||    
T  17628459 gtagtttatgaaaaaaccgtttatgaagatacaattttcgttagtgagagcttctaaattaaaataaaagcttatttatttacataagct 17628370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 392 - 481
Target Start/End: Original strand, 15631960 - 15632049
Alignment:
Q  392 tttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctcaaa 481  Q
    |||||||||||||  |||||||| ||||||||||| ||||||| ||  ||||||||||||||||||||||| ||||||||||||||||||    
T  15631960 tttatgaaaaaactgtttatgaaaatacaattttcgttagtgagagcatataaattaaaataaaaacttatttatttacataagctcaaa 15632049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 392 - 477
Target Start/End: Original strand, 42591438 - 42591523
Alignment:
Q  392 tttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||   |||||||||||||| ||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  42591438 tttatgaaaaaatagtttatgaagatacacttttcgttagtgaaagcttataaattaaaataaaaacttatttatttacataagct 42591523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 388 - 475
Target Start/End: Complemental strand, 3116096 - 3116009
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataag 475  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| | |  |||||||||||||||||| ||||  ||||||||||||    
T  3116096 gtagtttatgaaaaaaccatttatgaagatacaattttcgttagtaagatcttataaattaaaataaaagcttacttatttacataag 3116009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 388 - 478
Target Start/End: Original strand, 25485800 - 25485890
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctc 478  Q
    ||||||||||||||||| ||||||||||||| |||||||  |||||||| |||||||||||| ||||||| |||| ||||| |||||||||    
T  25485800 gtagtttatgaaaaaacaatttatgaagataaaattttcgctagtgaaaatttataaattaatataaaaatttatttatttgcataagctc 25485890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 15791435 - 15791524
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||| | || ||||||||||||||||| ||| ||| || |||||||||||||||||| ||||| ||||||||||||||    
T  15791435 gtagtttatgaaaaaatcgttaatgaagatacaattttcgttaatgagagcttataaattaaaataaaagcttatttatttacataagct 15791524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 32497306 - 32497217
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||  ||||||| |||||||||||| ||||||| || ||||||||||||||||||  |||| ||||||||||||||    
T  32497306 gtagtttatgaaaaaacagtttatgaggatacaattttcgttagtgagagcttataaattaaaataaaagtttatttatttacataagct 32497217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 390 - 477
Target Start/End: Complemental strand, 15235193 - 15235106
Alignment:
Q  390 agtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||  |||||||||| || |||||| ||||| | || |||||||||||||||||||||||| ||||||||||||||    
T  15235193 agtttatgaaaaaacggtttatgaagaaaccattttcgttagtaagagcttataaattaaaataaaaacttatttatttacataagct 15235106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 408 - 477
Target Start/End: Original strand, 19395846 - 19395915
Alignment:
Q  408 ttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||| || |||||||    
T  19395846 ttatgaagatacaattttcgttagtgaaagcttataaattaaaataaaaacttatttatatatataagct 19395915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 388 - 481
Target Start/End: Complemental strand, 35275932 - 35275839
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctcaaa 481  Q
    ||||||||||||||| |  |||| ||| ||||||||||| ||||||| | |||||||||||||||||||  |||| ||||||||||||||||||    
T  35275932 gtagtttatgaaaaacctgtttaggaatatacaattttcgttagtgagattttataaattaaaataaaagtttatttatttacataagctcaaa 35275839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 406 - 474
Target Start/End: Complemental strand, 8062025 - 8061957
Alignment:
Q  406 atttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    |||||||||||||||||||||||| |||| || ||||||||||||||||||| |||| |||||||||||    
T  8062025 atttatgaagatacaattttcatttgtgagagcttataaattaaaataaaaatttatttatttacataa 8061957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 388 - 474
Target Start/End: Original strand, 19220225 - 19220311
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    ||||||||||||||||| |||||||||||| ||||||||  || ||| || |||||||||||||||||| ||||| ||||| |||||    
T  19220225 gtagtttatgaaaaaactatttatgaagatgcaattttcgataatgagagattataaattaaaataaaagcttatttatttgcataa 19220311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 388 - 475
Target Start/End: Complemental strand, 5243438 - 5243351
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataag 475  Q
    ||||||||||||||||   |||||||||||||||||||| |||  || ||  ||||||||||||||||| ||||| ||||||||||||    
T  5243438 gtagtttatgaaaaaatagtttatgaagatacaattttcgttacggagagcatataaattaaaataaaagcttatttatttacataag 5243351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 407 - 477
Target Start/End: Original strand, 8410204 - 8410274
Alignment:
Q  407 tttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||||| ||||||| || || ||||||||||||||| ||||| |||||||| |||||    
T  8410204 tttatgaagatacaattttcgttagtgagagcttgtaaattaaaataaaagcttatttatttacagaagct 8410274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 387 - 457
Target Start/End: Complemental strand, 14461076 - 14461006
Alignment:
Q  387 cgtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaa 457  Q
    ||||||||||||||||||  ||||| |||||||||||||||||||||| |  ||||||||||| |||||||    
T  14461076 cgtagtttatgaaaaaacagtttataaagatacaattttcattagtgagaacttataaattaacataaaaa 14461006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 388 - 474
Target Start/End: Complemental strand, 16889000 - 16888914
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    |||||||||||||||||   ||||||||||||||||||||||||||| | ||||| | |||| |||||| ||||| ||||| |||||    
T  16889000 gtagtttatgaaaaaacagcttatgaagatacaattttcattagtgagaatttatgacttaacataaaagcttatttatttgcataa 16888914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 407 - 477
Target Start/End: Original strand, 17348949 - 17349019
Alignment:
Q  407 tttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||| |||| ||||||  || ||| ||||||||||||||||||||||||||| ||||||||||||||    
T  17348949 tttatgaaaatacgattttctctactgagagtttataaattaaaataaaaacttatttatttacataagct 17349019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 415 - 477
Target Start/End: Complemental strand, 35897626 - 35897564
Alignment:
Q  415 gatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||||||| |||||||||||| ||||||  |||| ||||||||||||||    
T  35897626 gatacaattttcattagtgaaaatttataaattaacataaaagtttatttatttacataagct 35897564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 13412487 - 13412399
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||||||| |||||||||||| |||  ||||||| || |||||||||||||  ||| ||||| |||| |||||||||    
T  13412487 gtagtttatgaaaaaaccattcatgaagatacaaattttgttagtgagagcttataaattaaaa-gaaagcttatttattcacataagct 13412399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 388 - 481
Target Start/End: Complemental strand, 36259325 - 36259232
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctcaaa 481  Q
    |||||||||||||||||  ||||| || ||||||||||| ||| ||||   ||||||||||| |||||| ||||| ||||| ||||||||||||    
T  36259325 gtagtttatgaaaaaacagtttataaacatacaattttcgttaatgaagacttataaattaatataaaagcttatttatttgcataagctcaaa 36259232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 391 - 474
Target Start/End: Original strand, 16708854 - 16708937
Alignment:
Q  391 gtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    |||||||||||||| ||||||||| ||||||||||||||||| | |  |||| |||||| ||||||| |||| ||||| |||||    
T  16708854 gtttatgaaaaaacaatttatgaatatacaattttcattagtaagatcttatgaattaacataaaaatttatttatttgcataa 16708937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 388 - 475
Target Start/End: Complemental strand, 37329446 - 37329359
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataag 475  Q
    |||||||||||||||||   ||||||||||||||||||| || |||| |  ||||||||||| |||||| ||||| ||||| ||||||    
T  37329446 gtagtttatgaaaaaacagcttatgaagatacaattttcgttggtgagaacttataaattaacataaaagcttatttatttgcataag 37329359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 3069888 - 3069799
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||   |||||||||||||||||||| |||||| |  |||| |||||| |||||| ||||| ||||  ||||||||    
T  3069888 gtagtttatgaaaaaacagcttatgaagatacaattttcactagtgagaacttatgaattaacataaaagcttatttattgtcataagct 3069799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 4068167 - 4068256
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||| | |||||||||||| |||||| ||||||| |  |||| |||||| ||||||  |||| ||||| ||||||||    
T  4068167 gtagtttatgaaaaaacaacttatgaagatactattttcgttagtgagaacttatgaattaatataaaagtttatttatttgcataagct 4068256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 9572818 - 9572729
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||| ||||||||||||| | ||||  ||||||| |  |||| |||||| |||||| ||||| ||||| ||||||||    
T  9572818 gtagtttatgaaaaaacaatttatgaagataaagtttttgttagtgagaacttatgaattaatataaaagcttatttatttgcataagct 9572729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 481
Target Start/End: Original strand, 12256659 - 12256751
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctcaaa 481  Q
    ||||||||||||||| | |||||||||| |||||||||| ||||| | |  |||| |||||||||||||| |||| |||||  |||||||||||    
T  12256659 gtagtttatgaaaaa-caatttatgaaggtacaattttcgttagtaagaacttatgaattaaaataaaaatttatttatttgtataagctcaaa 12256751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 17814242 - 17814331
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||    ||||||| ||||||||||| ||||| | |  ||||| |||||||||||| ||||| ||||||||||||||    
T  17814242 gtagtttatgaaaaaatgggttatgaaaatacaattttcgttagtcagaacttatagattaaaataaaagcttatttatttacataagct 17814331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 35282628 - 35282539
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||| | ||||||||||| |||||| ||||||||||  |||| |||||| ||||||   ||| ||||| ||||||||    
T  35282628 gtagtttatgaaaaaacaacttatgaagataaaattttaattagtgaaaacttatgaattaatataaaagtctatttatttgcataagct 35282539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 398 - 462
Target Start/End: Original strand, 19284960 - 19285024
Alignment:
Q  398 aaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttat 462  Q
    |||||||  |||||||||||||||||||| |||||||||  ||||| ||||||||||||| ||||    
T  19284960 aaaaaacagtttatgaagatacaattttcgttagtgaaaaattatagattaaaataaaaatttat 19285024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 417 - 469
Target Start/End: Original strand, 49822817 - 49822869
Alignment:
Q  417 tacaattttcattagtgaaagtttataaattaaaataaaaacttatatattta 469  Q
    |||||||||| ||||||||| ||||| ||||||||||||||||||| ||||||    
T  49822817 tacaattttcgttagtgaaaatttatgaattaaaataaaaacttatttattta 49822869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 477
Target Start/End: Complemental strand, 22088429 - 22088354
Alignment:
Q  398 aaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||  |||||||||||||||||||    ||||| || ||||||||||||||||||  |||| ||||||||||||||    
T  22088429 aaaaaactgtttatgaagatacaatttt----agtgagagcttataaattaaaataaaaggttatttatttacataagct 22088354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 434
Target Start/End: Complemental strand, 26946138 - 26946092
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtga 434  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||||    
T  26946138 gtagtttatgaaaaaacaacttatgaagatacaattttccttagtga 26946092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 5347206 - 5347295
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||    ||||||| ||||||||||| ||| | | |  ||||| |||||||||||| ||||| ||||||||||||||    
T  5347206 gtagtttatgaaaaaatgggttatgaaaatacaattttcgttaatcagaacttatagattaaaataaaagcttatttatttacataagct 5347295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 13038999 - 13039088
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||| | ||||||||||| | ||||| ||||||| |  |||| |||||| ||||||  |||| ||||| ||||||||    
T  13038999 gtagtttatgaaaaaacaacttatgaagataaagttttcgttagtgagaagttatgaattaatataaaagtttatttatttgcataagct 13039088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 15515381 - 15515292
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||    ||||||||||||||||||| ||||||| |  |||| |||||| || ||| ||||| ||||||| ||||||    
T  15515381 gtagtttatgaaaaaagagcttatgaagatacaattttcgttagtgagaacttatgaattaacatgaaagcttatttatttacttaagct 15515292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 26543025 - 26543114
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||| | ||| |||  |||||||||| |||||||||  |||||| |||| || |||| |||| ||||| ||||||||    
T  26543025 gtagtttatgaaaaaacaacttaagaaagtacaattttcgttagtgaaaacttataagttaagattaaaatttatttatttgcataagct 26543114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 28690056 - 28690145
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||| ||||   |||||||||||||||||| |||||||| |  || | |||||| |||||| ||||| ||||| ||||||||    
T  28690056 gtagtttatgaacaaacagcttatgaagatacaatttttattagtgagaaattctgaattaacataaaagcttatttatttgcataagct 28690145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 37712119 - 37712208
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||| | |||||||||||||| |||| ||||| | |  |||| |||||| ||||||  |||| ||||| ||||||||    
T  37712119 gtagtttatgaaaaaacaacttatgaagatacaactttcgttagtaagaacttatgaattaacataaaagtttatttatttgcataagct 37712208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 41196744 - 41196655
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||   ||||||||||||||||||  ||||||| || || | |||||| |||||  ||||| ||||| ||||||||    
T  41196744 gtagtttatgaaaaaacagcttatgaagatacaatttttgttagtgagagcttgtgaattaacataaaggcttatttatttgcataagct 41196655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 48819351 - 48819440
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||   ||||||||||||| ||||  ||||||| |  |||| |||||| |||||| ||||| ||||| ||||||||    
T  48819351 gtagtttatgaaaaaacagcttatgaagatacattttttgttagtgagaacttatgaattaacataaaagcttatttatttgcataagct 48819440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 475
Target Start/End: Complemental strand, 46501035 - 46500947
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaatttt-cattagtgaaagtttataaattaaaataaaaacttatatatttacataag 475  Q
    ||||||||||||||||    |||||||||||||||||| | |||||||||  |||||||| || |||||| ||||| ||||| ||||||    
T  46501035 gtagtttatgaaaaaataggttatgaagatacaattttccgttagtgaaaacttataaatcaacataaaagcttatttatttgcataag 46500947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 462
Target Start/End: Complemental strand, 12871490 - 12871435
Alignment:
Q  407 tttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttat 462  Q
    ||||||||||||| |||||||||| |||||  |||| |||||| ||||||||||||    
T  12871490 tttatgaagataccattttcattaatgaaaacttatgaattaacataaaaacttat 12871435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 477
Target Start/End: Complemental strand, 22593439 - 22593352
Alignment:
Q  390 agtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||| |||||| |  ||||| |||||||||||||  ||||||| |  ||||||||||| |||||| ||||| ||||| ||||||||    
T  22593439 agtttacgaaaaatcactttataaagatacaatttttgttagtgagaacttataaattaacataaaagcttatttatttgcataagct 22593352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 327
Target Start/End: Complemental strand, 5243529 - 5243499
Alignment:
Q  297 agggcctgtttgaattagcttattttagagc 327  Q
    |||||||||||||||||||||||||||||||    
T  5243529 agggcctgtttgaattagcttattttagagc 5243499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 474
Target Start/End: Original strand, 26988200 - 26988286
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    |||||||||||||||||   |||||||||||||||| || ||||| |||  |||| |||||| |||||| || || ||||| |||||    
T  26988200 gtagtttatgaaaaaacagcttatgaagatacaattgtcgttagtaaaaacttatgaattaacataaaagctaatttatttgcataa 26988286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 450
Target Start/End: Complemental strand, 31378785 - 31378723
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaa 450  Q
    |||||||||||||||| | ||||| |||||||||||||  ||||| |||  ||||||||||||    
T  31378785 gtagtttatgaaaaaaacgtttataaagatacaatttttgttagtaaaaacttataaattaaa 31378723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 6337790 - 6337701
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||   ||||||||||||||||||  |||| || |  |||| |||||| |||||| ||||| | ||| ||||||||    
T  6337790 gtagtttatgaaaaaacagcttatgaagatacaatttttgttagcgagaacttatgaattaacataaaagcttatttgtttgcataagct 6337701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 477
Target Start/End: Original strand, 22103181 - 22103250
Alignment:
Q  408 ttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||| ||||||||||| ||||| | |  ||||| |||||||||||| ||| | ||||||||||||||    
T  22103181 ttatgaaaatacaattttcgttagttagaacttatagattaaaataaaagcttctttatttacataagct 22103250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 456
Target Start/End: Original strand, 31249753 - 31249802
Alignment:
Q  407 tttatgaagatacaattttcattagtgaaagtttataaattaaaataaaa 456  Q
    |||||||||||||||||||||||||||| | | ||| |||||| ||||||    
T  31249753 tttatgaagatacaattttcattagtgagaatctatgaattaatataaaa 31249802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 47413424 - 47413513
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||| |||   ||||||||||| |||||   || ||||||  ||||||||||| |||||| ||||| ||||| ||||||||    
T  47413424 gtagtttatgaaataacaggttatgaagatataatttgtgttggtgaaaaattataaattaacataaaagcttatttatttgcataagct 47413513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 477
Target Start/End: Original strand, 20169317 - 20169405
Alignment:
Q  389 tagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||  ||||| || ||||||||| | | | ||| |  ||| ||||||| |||||||||||| ||||| ||||||||    
T  20169317 tagtttatgaaaaaacagtttataaatatacaatttccgtcaatgagaacttaaaaattaacataaaaacttatttatttgcataagct 20169405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 391 - 467
Target Start/End: Original strand, 41130049 - 41130125
Alignment:
Q  391 gtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatt 467  Q
    |||||||  ||||| | |||||||||||||||||||||||||| ||  |||  |||||| |||||| ||||| ||||    
T  41130049 gtttatgtcaaaacaacttatgaagatacaattttcattagtgcaaacttaagaattaacataaaatcttatttatt 41130125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 388 - 456
Target Start/End: Original strand, 51162321 - 51162389
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaa 456  Q
    ||||||||||||||||| | ||||||| ||||||||||| ||| | | |  ||||||||||| ||||||    
T  51162321 gtagtttatgaaaaaacaacttatgaatatacaattttcgttaataagatcttataaattaacataaaa 51162389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 9e-25; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 407 - 477
Target Start/End: Complemental strand, 29218266 - 29218196
Alignment:
Q  407 tttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  29218266 tttatgaagatataattttcattagtgagagtttataaattaaaataaaaacttatgtatttacataagct 29218196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 12607131 - 12607220
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||  |||||||||||||||||| | ||||||| || |||||||||||||||||| ||||| ||||||||||||||    
T  12607131 gtagtttatgaaaaaacggtttatgaagatacaatttccgttagtgagagcttataaattaaaataaaagcttatttatttacataagct 12607220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 42102158 - 42102247
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||| || ||||||||||||||||| ||| ||| || |||||||||||||||||| ||||| ||||||||||||||    
T  42102158 gtagtttatgaaaaaaccgttaatgaagatacaattttcgttaatgagaggttataaattaaaataaaagcttatttatttacataagct 42102247  T

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Target: chr8; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 388 - 475
Target Start/End: Original strand, 11988248 - 11988335
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataag 475  Q
    |||||| ||||||||||| |||||||||||||||||||| ||||||| || |||||||||||||||||| | ||| ||||||||||||    
T  11988248 gtagttcatgaaaaaaccgtttatgaagatacaattttcgttagtgagagcttataaattaaaataaaagcatatttatttacataag 11988335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 392 - 477
Target Start/End: Original strand, 19925613 - 19925698
Alignment:
Q  392 tttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||| |||||||| ||||||||||||||||||||| ||||||| || ||| ||||||||||||| |||||| ||||||||||||||    
T  19925613 tttacgaaaaaacaatttatgaagatacaattttcgttagtgagagcttacaaattaaaataaatacttatttatttacataagct 19925698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 42363351 - 42363262
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||| |||||||||||||||||||  ||||||| |  || ||||||||||||||| ||||| ||||||||||||||    
T  42363351 gtagtttatgaaaaaaccgtttatgaagatacaatttttgttagtgagaacttttaaattaaaataaaagcttatttatttacataagct 42363262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 388 - 474
Target Start/End: Original strand, 32751189 - 32751276
Alignment:
Q  388 gtagtttatgaaaaaaccattt-atgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    |||||||||||||||| ||||| || || ||||||||||| ||||| |||||||||||||||||||||||| |||| |||||||||||    
T  32751189 gtagtttatgaaaaaaacattttataaaaatacaattttcgttagtaaaagtttataaattaaaataaaaatttatttatttacataa 32751276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 388 - 474
Target Start/End: Complemental strand, 218287 - 218202
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    ||||||||||||||| | ||||||||||||||||||||| ||||| | || |||||||||||||||||||||||  |||||||||||    
T  218287 gtagtttatgaaaaa-ctatttatgaagatacaattttcgttagtaatagcttataaattaaaataaaaacttacttatttacataa 218202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 388 - 474
Target Start/End: Complemental strand, 694847 - 694762
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    ||||||||||||||| | ||||||||||||||||||||| ||||| | || |||||||||||||||||||||||  |||||||||||    
T  694847 gtagtttatgaaaaa-ctatttatgaagatacaattttcgttagtaatagcttataaattaaaataaaaacttacttatttacataa 694762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 388 - 474
Target Start/End: Complemental strand, 699056 - 698971
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    ||||||||||||||| | ||||||||||||||||||||| ||||| | || |||||||||||||||||||||||  |||||||||||    
T  699056 gtagtttatgaaaaa-ctatttatgaagatacaattttcgttagtaatagcttataaattaaaataaaaacttacttatttacataa 698971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 388 - 474
Target Start/End: Complemental strand, 731910 - 731825
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    ||||||||||||||| | ||||||||||||||||||||| ||||| | || |||||||||||||||||||||||  |||||||||||    
T  731910 gtagtttatgaaaaa-ctatttatgaagatacaattttcgttagtaatagcttataaattaaaataaaaacttacttatttacataa 731825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 388 - 474
Target Start/End: Complemental strand, 855806 - 855721
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    ||||||||||||||| | ||||||||||||||||||||| ||||| | || |||||||||||||||||||||||  |||||||||||    
T  855806 gtagtttatgaaaaa-ctatttatgaagatacaattttcgttagtaatagcttataaattaaaataaaaacttacttatttacataa 855721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 37410947 - 37410858
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||  || ||||||||||||||||| ||||| | |  ||||||||||||||| |||||||| ||||||||||||||    
T  37410947 gtagtttatgaaaaaacagttcatgaagatacaattttcgttagtaagaacttataaattaaaatataaacttatttatttacataagct 37410858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 38338885 - 38338796
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||   ||||||||||||  |||||| ||||||| |  |||||||||||||||||||||||| ||||||||||||||    
T  38338885 gtagtttatgaaaaaatagtttatgaagatatgattttcgttagtgagaacttataaattaaaataaaaacttatttatttacataagct 38338796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 398 - 477
Target Start/End: Original strand, 35055484 - 35055562
Alignment:
Q  398 aaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||||||||||||||| ||||||| || |||| |||| |||||||| ||||| ||||||||||||||    
T  35055484 aaaaaaccatttatgaagatacaattttcgttagtgagagcttatgaatt-aaataaaagcttatttatttacataagct 35055562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 38195538 - 38195627
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||| ||||||||  |||||| | ||||||||||  ||| ||| ||||||||||||||||||||||||||| ||||||| ||||||    
T  38195538 gtagtttacgaaaaaacagtttatggaaatacaatttttgttaatgagagtttataaattaaaataaaaacttatttatttacgtaagct 38195627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 388 - 468
Target Start/End: Original strand, 38895711 - 38895791
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatattt 468  Q
    ||||||||||||||||  ||||||||||||||||| ||  |||||||||  ||||||||||| |||||||||||| |||||    
T  38895711 gtagtttatgaaaaaataatttatgaagatacaatatttgttagtgaaaacttataaattaatataaaaacttatttattt 38895791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 408 - 477
Target Start/End: Complemental strand, 25333715 - 25333646
Alignment:
Q  408 ttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||||| |||||||||  |||| |||||| |||||| ||||| ||||||||||||||    
T  25333715 ttatgaagatacaattttcgttagtgaaaacttatgaattaacataaaagcttatttatttacataagct 25333646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 388 - 478
Target Start/End: Complemental strand, 24866985 - 24866895
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctc 478  Q
    |||||||||||||||||   |||||||| |||||||||| |||  || |  ||||||||||| |||||||||||| ||||| |||||||||    
T  24866985 gtagtttatgaaaaaacagcttatgaaggtacaattttcgttatcgagaacttataaattaagataaaaacttatttatttgcataagctc 24866895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 388 - 478
Target Start/End: Complemental strand, 31079200 - 31079110
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctc 478  Q
    |||||||| ||||||||  ||||| ||| ||||||||||  ||||||||  |||| |||||| |||||||||||| ||||| |||||||||    
T  31079200 gtagtttacgaaaaaactgtttataaagttacaattttcgatagtgaaaacttatgaattaagataaaaacttatttatttgcataagctc 31079110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 392 - 477
Target Start/End: Original strand, 3664191 - 3664276
Alignment:
Q  392 tttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||| |||||| | |||||||||| | |||||| |||  || || |||||||||||||||||||| ||| ||||||||||||||    
T  3664191 tttatggaaaaacaagttatgaagatgcgattttcgttaacgagagcttataaattaaaataaaaacctatttatttacataagct 3664276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 468
Target Start/End: Complemental strand, 32924246 - 32924167
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatattt 468  Q
    ||||||||||||||||| | ||||||||||| ||||||| |||||||||  |||| |||||| |||||| ||||| |||||    
T  32924246 gtagtttatgaaaaaacaacttatgaagataaaattttc-ttagtgaaaacttatgaattaatataaaagcttatttattt 32924167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 478
Target Start/End: Original strand, 2669700 - 2669790
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctc 478  Q
    ||||||||||||||||| | ||||||| ||||| |||||||||||   |  |||| |||||| |||||| ||||| ||||| |||||||||    
T  2669700 gtagtttatgaaaaaacaacttatgaatatacatttttcattagtaggatcttatgaattaacataaaagcttatttattttcataagctc 2669790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 477
Target Start/End: Complemental strand, 25671902 - 25671835
Alignment:
Q  408 ttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||  | |||||||||  ||||||||||| |||||| ||||| ||||||||||||||    
T  25671902 ttatgaagatacaatt--cgttagtgaaaacttataaattaacataaaagcttatttatttacataagct 25671835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 474
Target Start/End: Original strand, 32131492 - 32131578
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    |||||||||||| |||| |  ||||||||||||||||||| |||||| |  |||| |||||| |||||| ||||| ||||| |||||    
T  32131492 gtagtttatgaataaacaacctatgaagatacaattttcaatagtgagaacttatgaattaacataaaagcttatctatttgcataa 32131578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 389 - 477
Target Start/End: Original strand, 24087223 - 24087312
Alignment:
Q  389 tagtttatgaaaaaac-catttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||  | |||| | |||||| |||||| ||| |||||  |||||||||||||||||| ||||| ||||| ||||||||    
T  24087223 tagtttatgaaaaaaaacgtttacggagataccattttcgttaatgaaaacttataaattaaaataaaagcttatttatttgcataagct 24087312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 32975739 - 32975828
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||| || | ||||||||||||||||||  || |||| |  |||| |||||| |||||| ||||| ||||| ||||||||    
T  32975739 gtagtttatgaaaacacaacttatgaagatacaatttttgtttgtgagaacttatgaattaatataaaagcttatttatttgcataagct 32975828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 476
Target Start/End: Original strand, 31459099 - 31459187
Alignment:
Q  389 tagtttatgaaaaaacca-tttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagc 476  Q
    |||||||| |||||| || ||||| |||| |||||||| |||| | ||| |||||||||||  |||||||||||| ||||| |||||||    
T  31459099 tagtttataaaaaaaacagtttataaagaaacaatttttattaattaaaatttataaattatcataaaaacttatttatttgcataagc 31459187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 480
Target Start/End: Complemental strand, 36907678 - 36907586
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctcaa 480  Q
    ||||||||||||||||| | || |||| ||||||||||| ||||| | |  |||| |||||  |||||| ||||| ||||| |||||||||||    
T  36907678 gtagtttatgaaaaaacaacttgtgaatatacaattttcgttagtaagatcttatgaattagcataaaagcttatttatttgcataagctcaa 36907586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 477
Target Start/End: Original strand, 42667050 - 42667138
Alignment:
Q  389 tagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||| ||||||  |||| || ||||||||| || ||||| |||  ||||||||||||||||||  |||| ||||||| ||||||    
T  42667050 tagtttatggaaaaacggtttaggaggatacaattctcgttagtaaaaacttataaattaaaataaaagtttatttatttacgtaagct 42667138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 475
Target Start/End: Original strand, 14262378 - 14262465
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataag 475  Q
    ||||||||||||||||| | ||||||| ||||||||||  ||||| | |  |||| |||||| |||||||||||| | ||| ||||||    
T  14262378 gtagtttatgaaaaaacaacttatgaatatacaatttttgttagtaagatcttatgaattaacataaaaacttatttttttgcataag 14262465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 481
Target Start/End: Complemental strand, 16926752 - 16926669
Alignment:
Q  398 aaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctcaaa 481  Q
    |||||||  ||||| |||| ||||||| | ||||||| |  ||||||||||| |||||||||||| ||||| ||||| ||||||    
T  16926752 aaaaaacagtttataaagaaacaatttccgttagtgagaacttataaattaacataaaaacttatttatttgcataaactcaaa 16926669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 477
Target Start/End: Complemental strand, 25465878 - 25465792
Alignment:
Q  390 agtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||| | | ||||||||||||||||||  ||| |||||  |||| |||||| |||||| ||||| ||||| ||||||||    
T  25465878 agtttatgaaaaa-caacttatgaagatacaatttttgttactgaaaacttatgaattaacataaaagcttatttatttgcataagct 25465792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 478
Target Start/End: Original strand, 28280761 - 28280851
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctc 478  Q
    |||||||||||||||||  ||||||||| || |  |||  ||||||| |  |||| |||||| |||||||||||| ||||| |||||||||    
T  28280761 gtagtttatgaaaaaactgtttatgaaggtataccttttgttagtgagaacttatgaattaagataaaaacttatttatttgcataagctc 28280851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 426
Target Start/End: Complemental strand, 35168475 - 35168437
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttc 426  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  35168475 gtagtttatgaaaaaacagtttatgaagatacaattttc 35168437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 474
Target Start/End: Complemental strand, 41145429 - 41145344
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    ||||||||||||||||| | || | ||||||| |||||||||||||| |  |||| |||||| ||| |||||||| ||||| |||||    
T  41145429 gtagtttatgaaaaaacaactt-taaagatacgattttcattagtgagaacttatgaattaatatataaacttatttatttgcataa 41145344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 474
Target Start/End: Original strand, 2656522 - 2656587
Alignment:
Q  409 tatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    |||||| ||||||||||| ||||| |||  ||||||| ||| |||||||||||  |||||||||||    
T  2656522 tatgaatatacaattttcgttagtaaaatcttataaactaacataaaaacttaagtatttacataa 2656587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 16706134 - 16706045
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||| |  || ||| |||||| ||||||||  || | |||||||||||| |||||| | ||| ||||| ||||||||    
T  16706134 gtagtttatgaaaaaacaacatacgaatatacaactttcattaacgagaatttataaattaacataaaagcgtatttatttgcataagct 16706045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 16972390 - 16972301
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||| ||||||||||   ||||||||||||||||||| ||||||| |  |||| ||| || ||||||  |||| ||||| ||||||||    
T  16972390 gtagttcatgaaaaaacagcttatgaagatacaattttcgttagtgataacttatgaatcaatataaaagtttatttatttgcataagct 16972301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 474
Target Start/End: Original strand, 23412787 - 23412872
Alignment:
Q  389 tagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    |||||||||||||||| |||||| |||||  |||||| |||| ||  |  || | ||||||||||||||||||| ||||| |||||    
T  23412787 tagtttatgaaaaaacaatttataaagatggaattttaattaatgcgaacttttgaattaaaataaaaacttatttatttgcataa 23412872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 477
Target Start/End: Complemental strand, 32213025 - 32212960
Alignment:
Q  412 gaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||| ||||||||||||||||| |  ||||||| ||| |||||| ||||| ||||| ||||||||    
T  32213025 gaagacacaattttcattagtgagaacttataaaataacataaaagcttatttatttgcataagct 32212960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 477
Target Start/End: Complemental strand, 34338397 - 34338328
Alignment:
Q  408 ttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||||| ||||| |||  ||||| ||||| |||||| ||||| | ||| ||||||||    
T  34338397 ttatgaagatacaattttcgttagttaaaacttatagattaacataaaagcttatttttttgcataagct 34338328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 477
Target Start/End: Original strand, 14942477 - 14942565
Alignment:
Q  389 tagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||| | |||||||||| |||||||  ||||  | |  ||||||||||| |||||| ||||| ||||| || |||||    
T  14942477 tagtttatgaaaaaacgacttatgaagatgcaatttttgttagcaagaacttataaattaacataaaaccttatttatttgcaaaagct 14942565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 388 - 436
Target Start/End: Complemental strand, 25333765 - 25333718
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaa 436  Q
    ||||||||||||||| | | ||||||||||||||||||| |||||||||    
T  25333765 gtagtttatgaaaaa-caacttatgaagatacaattttcgttagtgaaa 25333718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 390 - 478
Target Start/End: Original strand, 30974043 - 30974131
Alignment:
Q  390 agtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctc 478  Q
    ||||||||||||||| | |||||||  |||||||||| ||||| | |  |||| |||||  |||||| ||||| ||||| |||||||||    
T  30974043 agtttatgaaaaaacaacttatgaatttacaattttcgttagtaagatcttatgaattagcataaaagcttatttatttgcataagctc 30974131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 478
Target Start/End: Complemental strand, 34545621 - 34545565
Alignment:
Q  422 ttttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctc 478  Q
    |||||| || |||||  ||||||||||| |||||||||||| |||||| ||||||||    
T  34545621 ttttcactaatgaaaacttataaattaacataaaaacttatttatttatataagctc 34545565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 2e-22; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 388 - 474
Target Start/End: Complemental strand, 29418786 - 29418700
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    ||||||||||||||||| |||||||||| |||||||||| ||||||| | |||||||||||| |||||||||||| ||||| |||||    
T  29418786 gtagtttatgaaaaaacaatttatgaaggtacaattttcgttagtgagaatttataaattaagataaaaacttatttatttgcataa 29418700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 15709926 - 15709837
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||| | || ||| ||||||||||||||||||| |||| |||||||||||||||||| || || |||||| |||||||    
T  15709926 gtagtttatgaaaaaatcgttaatgtagatacaattttcattagtaaaagcttataaattaaaataaaagctcatttatttaaataagct 15709837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 388 - 481
Target Start/End: Original strand, 41419553 - 41419646
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctcaaa 481  Q
    |||||||||||||||||   ||||||||||||||||||| ||||||| |  |||| |||||| |||||||||||| ||||| ||||||||||||    
T  41419553 gtagtttatgaaaaaacagcttatgaagatacaattttcgttagtgagaacttatcaattaacataaaaacttatttattttcataagctcaaa 41419646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 407 - 475
Target Start/End: Original strand, 26003068 - 26003136
Alignment:
Q  407 tttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataag 475  Q
    |||||||||||||||||||| ||||||| || || ||||||||||||||||||||| ||||||||||||    
T  26003068 tttatgaagatacaattttcgttagtgagagcttgtaaattaaaataaaaacttatttatttacataag 26003136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 4728897 - 4728985
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||  |||||||| ||| ||||||| ||||| | || |||||||||||||||||| ||||| ||||||||||||||    
T  4728897 gtagtttatgaaaaaacagtttatgaa-atataattttccttagtaagagcttataaattaaaataaaagcttatttatttacataagct 4728985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 16722078 - 16722167
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||| ||| ||||| |||||||||||||| ||||| ||||||| |||||||||||||| ||||||  | || ||||||||||||||    
T  16722078 gtagtttacgaagaaaccgtttatgaagatacacttttcgttagtgagagtttataaattaagataaaagttgatttatttacataagct 16722167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 392 - 477
Target Start/End: Complemental strand, 38461312 - 38461225
Alignment:
Q  392 tttatgaaaaaaccatttatgaagatacaattttcattagtgaaagt--ttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||  |||||||||||| ||||||  ||||||| ||   |||||||||||||||||||||||| ||||||||||||||    
T  38461312 tttatgaaaaaacagtttatgaagatataatttttgttagtgagagaacttataaattaaaataaaaacttatttatttacataagct 38461225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 388 - 470
Target Start/End: Complemental strand, 5203468 - 5203386
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttac 470  Q
    ||||||||||| |||| ||||||||||||||||| |||  |||| || || |||||||||||||||||| ||||| |||||||    
T  5203468 gtagtttatgagaaaatcatttatgaagatacaaattttgttagagagagcttataaattaaaataaaagcttatttatttac 5203386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 388 - 478
Target Start/End: Original strand, 29659112 - 29659202
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctc 478  Q
    |||||||| ||||||||  ||||||||  |||||||||||||||||| |  |||| |||||| |||||||||||| ||||| |||||||||    
T  29659112 gtagtttaagaaaaaacagtttatgaaagtacaattttcattagtgagaacttatgaattaagataaaaacttatttatttgcataagctc 29659202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 28357193 - 28357282
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||   ||||||||||||||||||| |||  ||||  ||||||||||| |||||| ||||| ||||| ||||||||    
T  28357193 gtagtttatgaaaaaacaggttatgaagatacaattttcgttaacgaaaacttataaattaacataaaagcttatttatttgcataagct 28357282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 388 - 480
Target Start/End: Original strand, 28357404 - 28357496
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctcaa 480  Q
    |||||||||||||||||  ||||||||| | |||||||| ||||||| |  |||  |||||| |||||||||||| ||||| |||||||||||    
T  28357404 gtagtttatgaaaaaacagtttatgaaggtccaattttcgttagtgagaacttacgaattaagataaaaacttatttatttgcataagctcaa 28357496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 401 - 459
Target Start/End: Complemental strand, 6008261 - 6008203
Alignment:
Q  401 aaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaact 459  Q
    |||| ||||||||||||||||||||| |  |||| ||||||||||||||||||||||||    
T  6008261 aaacaatttatgaagatacaattttcgtctgtgagagtttataaattaaaataaaaact 6008203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 389 - 475
Target Start/End: Original strand, 33757140 - 33757226
Alignment:
Q  389 tagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataag 475  Q
    ||||||||||||||||  || |||||||||| |||||    | ||| || |||||||||||||||||| ||||||||||||||||||    
T  33757140 tagtttatgaaaaaacagttaatgaagatacgatttttgcaaatgagagcttataaattaaaataaaagcttatatatttacataag 33757226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 407 - 481
Target Start/End: Complemental strand, 43268651 - 43268577
Alignment:
Q  407 tttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctcaaa 481  Q
    |||||||||||||||||||  ||||||| |  ||||||||||| |||||| ||||| ||||| ||||||||||||    
T  43268651 tttatgaagatacaatttttgttagtgagaacttataaattaacataaaagcttatttattttcataagctcaaa 43268577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 391 - 468
Target Start/End: Original strand, 11991360 - 11991436
Alignment:
Q  391 gtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatattt 468  Q
    |||||||||||||  | ||||||| ||||||||||| ||||||| |||||||||||||| |||||| ||||| |||||    
T  11991360 gtttatgaaaaaat-agttatgaacatacaattttcgttagtgagagtttataaattaacataaaagcttatttattt 11991436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 27805967 - 27806056
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||   |||| |||||||||||||  |||||||||  ||||||||||| ||||||  |||| ||||| ||||||||    
T  27805967 gtagtttatgaaaaaacatgttataaagatacaatttttgttagtgaaaacttataaattaacataaaagtttatttatttgcataagct 27806056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 388 - 475
Target Start/End: Original strand, 28625532 - 28625619
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataag 475  Q
    |||||||||||||||||   ||||||||||||||||||| ||||||| |   ||| |||||| |||||| ||||| ||||| ||||||    
T  28625532 gtagtttatgaaaaaacagcttatgaagatacaattttcgttagtgagaacctatgaattaacataaaagcttatttatttgcataag 28625619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 477
Target Start/End: Complemental strand, 2878707 - 2878622
Alignment:
Q  391 gtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||| |||  |||| ||||||||||||||  |||||||||  || |||||||| |||||| ||||| ||||||||||||||    
T  2878707 gtttatgaaacaacagttta-gaagatacaatttttgttagtgaaaacttttaaattaacataaaagcttatttatttacataagct 2878622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 462
Target Start/End: Original strand, 43319055 - 43319129
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttat 462  Q
    |||||||||||||||||  ||||||||| || ||||||| ||||||| |  |||| |||||| ||||||||||||    
T  43319055 gtagtttatgaaaaaacagtttatgaaggtataattttcgttagtgagaacttatgaattaagataaaaacttat 43319129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 780602 - 780513
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||    |||| || ||||||||||||||||| | |  ||||| |||||||||||| ||||| |||||| |||||||    
T  780602 gtagtttatgaaaaaatgggttatcaaaatacaattttcattagtcagaacttatagattaaaataaaagcttatctatttatataagct 780513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 407 - 476
Target Start/End: Original strand, 1943066 - 1943135
Alignment:
Q  407 tttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagc 476  Q
    |||||||||||||||||||||||||||| |  |||| |||||  |||||| ||||| ||||| |||||||    
T  1943066 tttatgaagatacaattttcattagtgagaacttatgaattagcataaaagcttatttatttgcataagc 1943135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 408 - 477
Target Start/End: Complemental strand, 5559933 - 5559864
Alignment:
Q  408 ttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||||| ||||||| | ||||| |||| | |||||| ||||| ||||| ||||||||    
T  5559933 ttatgaagatacaattttcgttagtgagaatttatgaatttacataaaagcttatttatttgcataagct 5559864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 481
Target Start/End: Complemental strand, 7364343 - 7364250
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctcaaa 481  Q
    ||||||||| || |||| | ||||||||||||||| ||  ||||||| |  |||| |||||| |||||| ||||| ||||| ||||||||||||    
T  7364343 gtagtttatcaacaaacaacttatgaagatacaatatttgttagtgagaacttatgaattaatataaaagcttatttatttgcataagctcaaa 7364250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 17657294 - 17657383
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||   |||||||||||| |||||| ||||||| |  |||| |||||| ||||||  |||| ||||| ||||||||    
T  17657294 gtagtttatgaaaaaacatcttatgaagatacgattttcgttagtgagaacttatgaattaacataaaaggttatttatttgcataagct 17657383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 467
Target Start/End: Original strand, 38498622 - 38498699
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatt 467  Q
    |||||||||||||| |  |||||| |||||| ||||||  |||||||||  |||||||||||||||||| ||||| ||||    
T  38498622 gtagtttatgaaaaca--atttataaagatataatttttgttagtgaaaacttataaattaaaataaaagcttatttatt 38498699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 480
Target Start/End: Original strand, 39990632 - 39990720
Alignment:
Q  392 tttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctcaa 480  Q
    |||||||||||||   ||| ||| |||||||||| |||||| |||  |||| |||||| ||||||| |||  |||||||||||||||||    
T  39990632 tttatgaaaaaacatcttaagaatatacaatttttattagtaaaatcttatgaattaagataaaaatttaattatttacataagctcaa 39990720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 477
Target Start/End: Original strand, 2531381 - 2531452
Alignment:
Q  407 tttatgaagatacaattttcattagtgaaagtttataaattaaaat-aaaaacttatatatttacataagct 477  Q
    ||||||||||||| |||||| |||  || ||||||||||| ||||| |||||||||| |||||||| |||||    
T  2531381 tttatgaagatacgattttcgttaacgagagtttataaataaaaataaaaaacttatttatttacacaagct 2531452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 15122596 - 15122678
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||  |||||||||||||||||||| |  |||       | |||||||||||||| ||||| ||||||||||||||    
T  15122596 gtagtttatgaaaaaacagtttatgaagatacaattttcgtccgtg-------agaaattaaaataaaatcttatttatttacataagct 15122678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 474
Target Start/End: Complemental strand, 33803821 - 33803754
Alignment:
Q  407 tttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    |||||||| ||||||||||||||||| |||  |||| || ||| ||||||| |||| |||||||||||    
T  33803821 tttatgaatatacaattttcattagtaaaaacttatgaagtaatataaaaatttatttatttacataa 33803754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 434
Target Start/End: Original strand, 1868898 - 1868944
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtga 434  Q
    ||||||||||||||| | | ||||||||||||||||||| |||||||    
T  1868898 gtagtttatgaaaaatcaacttatgaagatacaattttcgttagtga 1868944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 474
Target Start/End: Original strand, 9477388 - 9477474
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    |||| ||||||||||||  || |||||| |||||||||| ||| ||| |  |||| |||||| |||||||||||| ||||| |||||    
T  9477388 gtaggttatgaaaaaacagttcatgaaggtacaattttcgttactgagaacttatgaattaagataaaaacttatttatttgcataa 9477474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 13625555 - 13625465
Alignment:
Q  388 gtagtttatgaaaaaaccat-ttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||| |||| ||  |||| |||||| ||||||| |||||||||  ||||||||||| ||||||  |||| ||||| ||||||||    
T  13625555 gtagtttatgataaaaacagcttataaagataaaattttcgttagtgaaaacttataaattaatataaaagtttatttatttgcataagct 13625465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 389 - 475
Target Start/End: Complemental strand, 40152909 - 40152823
Alignment:
Q  389 tagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataag 475  Q
    |||||||||||||||| ||||||||||||| ||||||| ||  ||| |  |||| |||||| ||||||  |||| ||||| ||||||    
T  40152909 tagtttatgaaaaaacaatttatgaagataaaattttcgttcttgagaacttatgaattaatataaaagattatttatttgcataag 40152823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 13060636 - 13060547
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||   |||||||| ||| |||||| ||||||| |  |||| |||||| |||||| ||||| ||||| ||| ||||    
T  13060636 gtagtttatgaaaaaacagcttatgaagttaccattttcgttagtgagaacttatgaattaacataaaagcttatttatttgcattagct 13060547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 477
Target Start/End: Complemental strand, 20458572 - 20458503
Alignment:
Q  408 ttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||| ||||||||||| || || | |  ||||| |||||||||||| ||||| ||||||||||||||    
T  20458572 ttatgaaaatacaattttcgttggtcagaacttatagattaaaataaaagcttatttatttacataagct 20458503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 24030267 - 24030355
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||| | ||  || |||||||||||| ||||||| |  |||| |||||| |||||| ||||| ||||| ||||||||    
T  24030267 gtagtttatgaaaaaac-acttgcgaggatacaattttcgttagtgagaacttatgaattaacataaaagcttatttatttgcataagct 24030355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 29922223 - 29922134
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||| ||   ||||| | ||||||||||  ||||||| || |||| |||||| |||||| ||||| ||||| ||||||||    
T  29922223 gtagtttatgaaaacacagcttatgcatatacaattttttttagtgagagcttatgaattaatataaaagcttatttatttgcataagct 29922134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 39154795 - 39154706
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||   |||||||||| ||||||| |||| ||| |  |||| |||||| | |||| ||||| ||||| ||||||||    
T  39154795 gtagtttatgaaaaaactgattatgaagatgcaatttttattattgagaacttatgaattaacacaaaagcttatttatttgcataagct 39154706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 407 - 475
Target Start/End: Complemental strand, 33732442 - 33732374
Alignment:
Q  407 tttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataag 475  Q
    |||||||| ||||||||||||| ||| |||  |||| || ||| ||||||| |||| ||||||||||||    
T  33732442 tttatgaatatacaattttcatcagtaaaaacttatgaagtaatataaaaatttatttatttacataag 33732374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 477
Target Start/End: Original strand, 35536898 - 35536985
Alignment:
Q  389 tagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||   ||||||||||||||||||| ||| ||| |  |||| || ||| |||||| ||||| ||||| ||||||||    
T  35536898 tagtttatgaaaaaacagcttatgaagatacaattttcgttactgagaacttatgaa-taatataaaagcttatttatttgcataagct 35536985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 399 - 475
Target Start/End: Original strand, 42478889 - 42478965
Alignment:
Q  399 aaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataag 475  Q
    |||||| | ||||||| |||||||||| ||| || |||  |||| |||||| |||||||||||| ||||| ||||||    
T  42478889 aaaaacaacttatgaatatacaatttttatttgtaaaatcttatgaattaatataaaaacttatttatttgcataag 42478965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 477
Target Start/End: Original strand, 42852075 - 42852162
Alignment:
Q  389 tagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||| | |||| || ||||||||||| ||||||| |  |||| |||||| |||||| ||||| || || ||||||||    
T  42852075 tagtttatgaaaaaacaacttataaa-atacaattttcgttagtgagaacttatgaattaacataaaagcttatttagttgcataagct 42852162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 9e-22; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 32522080 - 32521991
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||  || ||||||||||||||||| ||||| | || ||||||||||||||| |||||||| ||||||||||||||    
T  32522080 gtagtttatgaaaaaacagttcatgaagatacaattttcgttagtaagagcttataaattaaaatataaacttatttatttacataagct 32521991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 398 - 487
Target Start/End: Original strand, 40301421 - 40301509
Alignment:
Q  398 aaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctcaaatcaaac 487  Q
    |||||||| |||||||||||||| ||||| ||||||| ||||||||||||||||||||| | ||| |||||||||||||||||| |||||    
T  40301421 aaaaaaccgtttatgaagatacacttttcgttagtgagagtttataaattaaaataaaagc-tatttatttacataagctcaaaccaaac 40301509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 388 - 475
Target Start/End: Original strand, 19683625 - 19683711
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataag 475  Q
    ||||||||||||||| || |||||||||||||||||||  ||||| |||  |||||||||||||||||| ||||| ||||||||||||    
T  19683625 gtagtttatgaaaaa-ccgtttatgaagatacaatttttgttagtaaaaacttataaattaaaataaaaccttatctatttacataag 19683711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 391 - 474
Target Start/End: Complemental strand, 30382300 - 30382217
Alignment:
Q  391 gtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    ||||| |||| ||| ||||| ||||||||||||||| |||||||||| ||||||||||||| |||| ||||| |||||||||||    
T  30382300 gtttacgaaagaacaatttaggaagatacaattttcgttagtgaaagcttataaattaaaacaaaagcttatttatttacataa 30382217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 22422203 - 22422114
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||  ||| | ||||| | |||||  ||||||| || |||||||||||||||||||||||| ||||||||||||||    
T  22422203 gtagtttatgaaaaaacagtttttcaagatgcgatttttgttagtgagagcttataaattaaaataaaaacttatttatttacataagct 22422114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 407 - 474
Target Start/End: Original strand, 446498 - 446565
Alignment:
Q  407 tttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    |||||||||||||||||||| ||||||| || |||||||||||||||||| ||||  |||||||||||    
T  446498 tttatgaagatacaattttcgttagtgagagcttataaattaaaataaaagcttacttatttacataa 446565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 388 - 481
Target Start/End: Original strand, 5516127 - 5516221
Alignment:
Q  388 gtagtttatgaaaaaacca-tttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctcaaa 481  Q
    |||||||||||||||| || ||||| || ||||||||||| ||||||| || ||||||||||| | |||| ||||| ||||| ||||||||||||    
T  5516127 gtagtttatgaaaaaaacagtttataaaaatacaattttcgttagtgagagcttataaattaacacaaaagcttatttatttgcataagctcaaa 5516221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 389 - 475
Target Start/End: Original strand, 21788510 - 21788596
Alignment:
Q  389 tagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataag 475  Q
    |||||||||||||||| | ||||||||||| ||||||| ||||||| || |||| |||||| |||||| ||||| ||||| ||||||    
T  21788510 tagtttatgaaaaaacaacttatgaagataaaattttcgttagtgagagcttatgaattaatataaaagcttatttatttgcataag 21788596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 388 - 468
Target Start/End: Complemental strand, 10574196 - 10574115
Alignment:
Q  388 gtagtttatgaaaaaa-ccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatattt 468  Q
    |||||||||||||||| |||||||||||||||||| |||| | || || || |||||||||||||||||| ||||| |||||    
T  10574196 gtagtttatgaaaaaaaccatttatgaagatacaaatttcgtcagcgagagcttataaattaaaataaaagcttatttattt 10574115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 22898391 - 22898302
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||    ||||||| ||||||||||| ||||| |||  ||||| |||||||||||| ||||| ||||||||||||||    
T  22898391 gtagtttatgaaaaaatgggttatgaaaatacaattttcgttagtcaaaacttatagattaaaataaaagcttatttatttacataagct 22898302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 23956298 - 23956209
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||| ||||||  ||||| |||||||||||||| ||| ||| |  ||||||||||| |||||||||||| ||||| ||||||||    
T  23956298 gtagtttatggaaaaacagtttataaagatacaattttcgttaatgagaacttataaattaacataaaaacttatttatttgcataagct 23956209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 32366201 - 32366290
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||  |||||||| |||| |||||| ||||| | || ||||||| ||||| |||| ||||| ||||||||||||||    
T  32366201 gtagtttatgaaaaaacagtttatgaatatacgattttcgttagtaagagcttataaaataaaacaaaagcttatttatttacataagct 32366290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 388 - 462
Target Start/End: Original strand, 17532000 - 17532075
Alignment:
Q  388 gtagtttatgaaaaaa-ccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttat 462  Q
    |||||||||||||| | || |||||||||||||  ||||| |||| || |||||||||||||||||||||||||||    
T  17532000 gtagtttatgaaaacatccgtttatgaagatacgcttttctttagggagagtttataaattaaaataaaaacttat 17532075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 407 - 477
Target Start/End: Complemental strand, 2757101 - 2757031
Alignment:
Q  407 tttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||| | ||| ||||| ||||||| || ||||||| |||||||||||||||| ||||||||||||||    
T  2757101 tttatgaaaaaacagttttcgttagtgagagcttataaaataaaataaaaacttatttatttacataagct 2757031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 388 - 474
Target Start/End: Original strand, 17546476 - 17546562
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    ||||||||||||||||| | ||||||| |||  |||||| |||||||||  ||||||| ||| ||||||| |||| |||||||||||    
T  17546476 gtagtttatgaaaaaacaacttatgaatatatcattttcgttagtgaaaacttataaactaacataaaaatttatttatttacataa 17546562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 390 - 478
Target Start/End: Original strand, 15155867 - 15155955
Alignment:
Q  390 agtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctc 478  Q
    ||||||||||||||| ||||| |||| |||||||| | ||| ||| |  |||| |||||| |||||||||||| ||||| |||||||||    
T  15155867 agtttatgaaaaaacaatttaagaaggtacaatttccgttaatgagaacttatgaattaagataaaaacttatttattttcataagctc 15155955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 407 - 478
Target Start/End: Complemental strand, 35515510 - 35515439
Alignment:
Q  407 tttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctc 478  Q
    ||||||||| || ||||||||||||||| ||||||| |||||| ||||||| |||| |||||  ||||||||    
T  35515510 tttatgaaggtataattttcattagtgagagtttatgaattaagataaaaatttatttatttgtataagctc 35515439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 477
Target Start/End: Original strand, 736019 - 736105
Alignment:
Q  391 gtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||   |||||||||||| ||||||  ||| ||| |  ||||||||||| |||||||||||| ||| ||||||||||    
T  736019 gtttatgaaaaaatagtttatgaagatataatttttgttattgagaacttataaattaacataaaaacttatttatatacataagct 736105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 474
Target Start/End: Complemental strand, 7480932 - 7480847
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    ||||||||| ||||||| | ||| ||||||||||||||||||||| | |  |||| |||||| |||||||||||| ||||| |||||    
T  7480932 gtagtttat-aaaaaacaacttaggaagatacaattttcattagtcagaacttatgaattaacataaaaacttatttatttgcataa 7480847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 434
Target Start/End: Original strand, 12223904 - 12223950
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtga 434  Q
    |||||||||||||||||  ||||||||||||| ||||||||||||||    
T  12223904 gtagtttatgaaaaaacagtttatgaagataccattttcattagtga 12223950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 4026977 - 4027066
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||   ||||||||||||||||||  ||||||| |  |||| |||||| |||| | ||||| ||||| ||||||||    
T  4026977 gtagtttatgaaaaaacagcttatgaagatacaatttttgttagtgagaacttatgaattaacataatagcttatttatttgcataagct 4027066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 8832509 - 8832598
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||| ||   |||  |||||||||||||| |||||||||  |||| |||||| |||||| ||||| ||||| ||||||||    
T  8832509 gtagtttatgaaaacacaggttagaaagatacaattttcgttagtgaaaacttatgaattaacataaaagcttatttatttgcataagct 8832598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 439 - 475
Target Start/End: Original strand, 26440196 - 26440232
Alignment:
Q  439 ttataaattaaaataaaaacttatatatttacataag 475  Q
    |||||||||||||||||||||||| ||||||||||||    
T  26440196 ttataaattaaaataaaaacttatttatttacataag 26440232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 468
Target Start/End: Complemental strand, 38471825 - 38471745
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatattt 468  Q
    |||||||||||||||||  ||||||||| |||||||||| ||||||| |  |||| |||||| |||| || |||| |||||    
T  38471825 gtagtttatgaaaaaacagtttatgaaggtacaattttcgttagtgagaacttatgaattaagataacaatttatttattt 38471745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 474
Target Start/End: Complemental strand, 2401656 - 2401570
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    ||||||||||||||||    ||||||| ||||||||||  ||||| | |  ||||| ||||||||||||| |||| |||||||||||    
T  2401656 gtagtttatgaaaaaatgggttatgaaaatacaatttttgttagtcagaacttatagattaaaataaaaatttatttatttacataa 2401570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 454
Target Start/End: Original strand, 12267049 - 12267115
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataa 454  Q
    ||||||||||||||||    ||||||||||| |||||| ||||||||||  ||||||||||| ||||    
T  12267049 gtagtttatgaaaaaataggttatgaagatataatttttattagtgaaaacttataaattaacataa 12267115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 478
Target Start/End: Complemental strand, 16108156 - 16108066
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctc 478  Q
    ||||||||||||||||| | ||||||| ||||||||||  ||| | |||  |||| |||||| |||||  ||||  |||||||||||||||    
T  16108156 gtagtttatgaaaaaacaacttatgaatatacaatttttgttaattaaatcttatgaattaacataaacgcttaattatttacataagctc 16108066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 477
Target Start/End: Original strand, 887484 - 887553
Alignment:
Q  408 ttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    ||||||||||||||||||||||||  | |  |||| |||||| |||||| ||||| ||||| ||||||||    
T  887484 ttatgaagatacaattttcattagcaagaacttatgaattaacataaaagcttatctatttgcataagct 887553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 482
Target Start/End: Original strand, 31165107 - 31165175
Alignment:
Q  413 aagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctcaaat 482  Q
    |||||||| ||||| |||||| ||  ||||||||||| |||||| ||||| ||||| |||||||||||||    
T  31165107 aagatacatttttcgttagtggaaacttataaattaacataaaa-cttatttatttgcataagctcaaat 31165175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 33321346 - 33321257
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||   ||||||||||||||||||  ||||||| || || | |||||| |||||   |||| ||||| ||||||||    
T  33321346 gtagtttatgaaaaaacagcttatgaagatacaatttttgttagtgagagcttgtgaattaacataaaggtttatttatttgcataagct 33321257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 36501549 - 36501460
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||   ||||||||||| ||||| | ||||||| |  | || |||||| |||||| ||||| ||||| ||||||||    
T  36501549 gtagtttatgaaaaaacagcttatgaagataaaatttgcgttagtgagaactcatgaattaacataaaagcttatttatttgcataagct 36501460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 425
Target Start/End: Original strand, 37409695 - 37409732
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaatttt 425  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  37409695 gtagtttatgaaaaaacaatttatgaaaatacaatttt 37409732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 481
Target Start/End: Original strand, 42064903 - 42064996
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagctcaaa 481  Q
    ||||||||| ||||||  | |||||||||||  |||||| ||||| | |  |||| |||||| |||||| ||||| ||||| ||||||||||||    
T  42064903 gtagtttataaaaaaataacttatgaagatatcattttcgttagtaagaacttatgaattaatataaaagcttatttatttgcataagctcaaa 42064996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 388 - 468
Target Start/End: Original strand, 29774797 - 29774877
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatattt 468  Q
    |||||||||||||||||   ||||||| ||||||||||| ||||||| |  |||| ||||||  ||||| ||||| |||||    
T  29774797 gtagtttatgaaaaaacggcttatgaaaatacaattttcgttagtgagaacttatgaattaacgtaaaagcttatttattt 29774877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 409 - 477
Target Start/End: Original strand, 38216092 - 38216160
Alignment:
Q  409 tatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||| ||||||| |  |||| | |||| |||||| ||||| ||||| ||||||||    
T  38216092 tatgaagatacaattttcgttagtgagaacttatgagttaacataaaagcttatttatttgcataagct 38216160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 396 - 477
Target Start/End: Original strand, 59327 - 59408
Alignment:
Q  396 tgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||  ||||||||||||| || |||| || |||||| |||||||||||||||||||||||| ||||||||||||||    
T  59327 tgaaaaaacggtttatgaagatacgatattcactaatgaaagcttataaattaaaataaaaacttatttatttacataagct 59408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 477
Target Start/End: Complemental strand, 58902 - 58813
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||    |||||||||||||||||| | |||||||||  |||||| |||| |||| | | ||| ||||| ||||||||    
T  58902 gtagtttatgaaaaagtattttatgaagatacaatttccgttagtgaaaacttataatttaacataatagcatatttatttgcataagct 58813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1130 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold1130
Description:

Target: scaffold1130; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 410 - 477
Target Start/End: Original strand, 2325 - 2392
Alignment:
Q  410 atgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||||||  || ||||||||||||||||||||| ||||| ||||||||||||||    
T  2325 atgaagatacaattttcattaaggagagtttataaattaaaataaaatcttatttatttacataagct 2392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 388 - 474
Target Start/End: Complemental strand, 279026 - 278941
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataa 474  Q
    |||||||||||||||||||||||| ||||||||| |||  ||||||| || |||||||||||||  ||| ||||| |||||||||||    
T  279026 gtagtttatgaaaaaaccatttataaagatacaaattttgttagtgagagcttataaattaaaa-gaaagcttatttatttacataa 278941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 407 - 471
Target Start/End: Complemental strand, 40689 - 40625
Alignment:
Q  407 tttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttaca 471  Q
    |||| ||||||||||||||| |||  || || |||||||||||||||||| ||||| ||||||||    
T  40689 tttaagaagatacaattttcgttaaggagagcttataaattaaaataaaatcttatttatttaca 40625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 388 - 477
Target Start/End: Original strand, 24799 - 24888
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||   | || |||||||||| ||||||||||| |  ||||||||||| |||||||||||| ||||| ||||||||    
T  24799 gtagtttatgaaaaaacagctaatcaagatacaatattcattagtgagaacttataaattaacataaaaacttatttatttgcataagct 24888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 408 - 477
Target Start/End: Complemental strand, 242654 - 242585
Alignment:
Q  408 ttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||| |||||| |||| || || |||||||||||||||||||| ||| ||||||||||||||    
T  242654 ttatgaagatacgattttcgttagcgagagcttataaattaaaataaaaacctatttatttacataagct 242585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 407 - 477
Target Start/End: Original strand, 19626 - 19696
Alignment:
Q  407 tttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||||||||||||  ||| |||||  |||||| ||||||||||| ||||| ||||||||||||||    
T  19626 tttatgaagatacaatttttgttaatgaaatcttataagttaaaataaaatcttatttatttacataagct 19696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 408 - 477
Target Start/End: Complemental strand, 38467 - 38398
Alignment:
Q  408 ttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataagct 477  Q
    |||||||||| | |||||| |||| || || |||||||||||||||||| ||||| ||||||||||||||    
T  38467 ttatgaagatgcgattttcgttagcgagagcttataaattaaaataaaagcttatttatttacataagct 38398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 475
Target Start/End: Complemental strand, 14780 - 14693
Alignment:
Q  388 gtagtttatgaaaaaaccatttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatatttacataag 475  Q
    ||||||||||||||| |  ||||| || ||||||||||| ||||||| |  ||||||||||| || ||| ||||| ||||| ||||||    
T  14780 gtagtttatgaaaaatcagtttataaatatacaattttcgttagtgagaacttataaattaacatgaaagcttatttatttgcataag 14693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 407 - 474
Target Start/End: Original strand, 178572 - 178640
Alignment:
Q  407 tttatgaagatacaattttcattagtgaaagtttataaa-ttaaaataaaaacttatatatttacataa 474  Q
    |||||||||||||||||||| ||||| | || ||||||| |||||||  ||| |||| |||||||||||    
T  178572 tttatgaagatacaattttcgttagtaagagcttataaatttaaaatttaaaattatttatttacataa 178640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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