View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: F9645H-LTR4-TNT-insertion-6 (Length: 430)

Name: F9645H-LTR4-TNT-insertion-6
Description: F9645H-LTR4
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] F9645H-LTR4-TNT-insertion-6
F9645H-LTR4-TNT-insertion-6
[»] chr2 (7 HSPs)
chr2 (28-206)||(36875304-36875482)
chr2 (318-386)||(40519221-40519289)
chr2 (236-299)||(23028715-23028778)
chr2 (239-299)||(24678617-24678677)
chr2 (317-366)||(26374858-26374907)
chr2 (235-299)||(21320256-21320320)
chr2 (236-291)||(23029888-23029943)
[»] scaffold0002 (1 HSPs)
scaffold0002 (317-423)||(186117-186223)
[»] chr4 (2 HSPs)
chr4 (317-422)||(491287-491392)
chr4 (236-293)||(13513846-13513903)
[»] chr3 (7 HSPs)
chr3 (317-422)||(13222783-13222888)
chr3 (236-299)||(15066186-15066249)
chr3 (343-422)||(25811063-25811141)
chr3 (236-299)||(14873537-14873600)
chr3 (236-293)||(11861468-11861525)
chr3 (239-299)||(23078969-23079029)
chr3 (236-292)||(16803906-16803962)
[»] chr5 (3 HSPs)
chr5 (317-422)||(34654615-34654720)
chr5 (236-299)||(23526479-23526542)
chr5 (236-299)||(20804025-20804088)
[»] chr1 (2 HSPs)
chr1 (317-422)||(3856366-3856471)
chr1 (236-293)||(22435534-22435591)
[»] scaffold0410 (1 HSPs)
scaffold0410 (236-293)||(666-723)
[»] scaffold0029 (1 HSPs)
scaffold0029 (235-299)||(8738-8802)
[»] scaffold0080 (1 HSPs)
scaffold0080 (236-299)||(32404-32467)
[»] scaffold0064 (1 HSPs)
scaffold0064 (236-299)||(66246-66309)
[»] scaffold0042 (1 HSPs)
scaffold0042 (236-299)||(36536-36599)
[»] chr8 (1 HSPs)
chr8 (236-299)||(21163686-21163749)
[»] scaffold0023 (1 HSPs)
scaffold0023 (242-299)||(30290-30347)
[»] scaffold0297 (1 HSPs)
scaffold0297 (236-291)||(7381-7436)
[»] scaffold0081 (2 HSPs)
scaffold0081 (236-299)||(22129-22192)
scaffold0081 (236-299)||(37553-37616)
[»] scaffold0034 (1 HSPs)
scaffold0034 (236-293)||(121898-121955)
[»] scaffold0501 (1 HSPs)
scaffold0501 (235-291)||(448-504)
[»] scaffold0009 (1 HSPs)
scaffold0009 (236-294)||(229573-229631)
[»] scaffold0044 (1 HSPs)
scaffold0044 (236-293)||(17685-17742)
[»] chr7 (1 HSPs)
chr7 (236-293)||(9591849-9591906)


Alignment Details
Target: chr2 (Bit Score: 159; Significance: 2e-84; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 28 - 206
Target Start/End: Complemental strand, 36875482 - 36875304
Alignment:
Q  28 ccaaaaggcaaagataaccatggtagtgtaatgaaggaagtatatgaaattattcaaaaggtgaggtacaatcaatgtaaatagcagcatgtaatatcaa 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  36875482 ccaaaaggcaaagataaccatggtagtgtaatgaaggaagtatatgagattattcagaaggtgaggtacaatcaatgtagatagcagcatgtaatatcaa 36875383  T
Q  128 aggaatttgagtcaaagctgaaaaagggagtatggttggaggctcggagctacctatcaaaacgtatatgcattgaatt 206  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  36875382 aggaatttgagtcaaagctgagaaagggagtatggttggaggctcggagctacctatcagaacgtatatgcattgaatt 36875304  T

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Target: chr2; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 318 - 386
Target Start/End: Original strand, 40519221 - 40519289
Alignment:
Q  318 gaaacaagcacacttggagagcgcagtacaatggatagttgtacgctgcgttcgggaaggatgaatcgc 386  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  40519221 gaaacaagcacacttggagagcgcagtacaatggatagttgtatgctgcgttcgggaaggatgaatcgc 40519289  T

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Target: chr2; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 236 - 299
Target Start/End: Complemental strand, 23028778 - 23028715
Alignment:
Q  236 tcctcataaattctacaactattcaccaactcggaaaaaactcggatctattggtatctaattg 299  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||| |||||    
T  23028778 tcctcataaattctacaactgttcaccaactcggagaaaactcggatctgttggtatccaattg 23028715  T

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Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 299
Target Start/End: Original strand, 24678617 - 24678677
Alignment:
Q  239 tcataaattctacaactattcaccaactcggaaaaaactcggatctattggtatctaattg 299  Q
    ||||||||||| ||||| |||||||||||| |||||||||||||||||||||||| |||||    
T  24678617 tcataaattctgcaactgttcaccaactcgcaaaaaactcggatctattggtatccaattg 24678677  T

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Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 366
Target Start/End: Complemental strand, 26374907 - 26374858
Alignment:
Q  317 ggaaacaagcacacttggagagcgcagtacaatggatagttgtacgctgc 366  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  26374907 ggaaacaagcacacttggagagcacagtacaatggatagttgtatgctgc 26374858  T

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Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 299
Target Start/End: Complemental strand, 21320320 - 21320256
Alignment:
Q  235 atcctcataaattctacaactattcaccaactcggaaaaaactcggatctattggtatctaattg 299  Q
    ||||||||||||||| || |||||||||| |||||| ||||||||||| | |||||||| |||||    
T  21320320 atcctcataaattctgcagctattcaccagctcggagaaaactcggatttgttggtatccaattg 21320256  T

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Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 291
Target Start/End: Original strand, 23029888 - 23029943
Alignment:
Q  236 tcctcataaattctacaactattcaccaactcggaaaaaactcggatctattggta 291  Q
    ||||||||||| || |||||| ||||||||||||| |||||||| |||| ||||||    
T  23029888 tcctcataaatcctgcaactactcaccaactcggagaaaactcgaatcttttggta 23029943  T

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Target: scaffold0002 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 317 - 423
Target Start/End: Complemental strand, 186223 - 186117
Alignment:
Q  317 ggaaacaagcacacttggagagcgcagtacaatggatagttgtacgctgcgttcgggaaggatgaatcgctcccgaaaaggaatctattgattctctccc 416  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  186223 ggaaacaagcacacttggagagcgcagtacaatggatagttgtatgctgcgttcgggaaggatgaatcgctcccgaaaaggaatctattgattctctccc 186124  T
Q  417 aattggt 423  Q
    |||||||    
T  186123 aattggt 186117  T

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Target: chr4 (Bit Score: 102; Significance: 2e-50; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 317 - 422
Target Start/End: Original strand, 491287 - 491392
Alignment:
Q  317 ggaaacaagcacacttggagagcgcagtacaatggatagttgtacgctgcgttcgggaaggatgaatcgctcccgaaaaggaatctattgattctctccc 416  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  491287 ggaaacaagcacacttggagagcgcagtacaatggatagttgtatgctgcgttcgggaaggatgaatcgctcccgaaaaggaatctattgattctctccc 491386  T
Q  417 aattgg 422  Q
    ||||||    
T  491387 aattgg 491392  T

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Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 293
Target Start/End: Original strand, 13513846 - 13513903
Alignment:
Q  236 tcctcataaattctacaactattcaccaactcggaaaaaactcggatctattggtatc 293  Q
    |||||||| ||||| || ||||||||||| || | |||||||||||||| ||||||||    
T  13513846 tcctcatagattctgcagctattcaccaaatcaggaaaaactcggatctgttggtatc 13513903  T

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Target: chr3 (Bit Score: 102; Significance: 2e-50; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 317 - 422
Target Start/End: Complemental strand, 13222888 - 13222783
Alignment:
Q  317 ggaaacaagcacacttggagagcgcagtacaatggatagttgtacgctgcgttcgggaaggatgaatcgctcccgaaaaggaatctattgattctctccc 416  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13222888 ggaaacaagcacacttggagagcgcagtacaatggatagttgtatgctgcgttcgggaaggatgaatcgctcccgaaaaggaatctattgattctctccc 13222789  T
Q  417 aattgg 422  Q
    ||||||    
T  13222788 aattgg 13222783  T

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Target: chr3; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 236 - 299
Target Start/End: Original strand, 15066186 - 15066249
Alignment:
Q  236 tcctcataaattctacaactattcaccaactcggaaaaaactcggatctattggtatctaattg 299  Q
    ||||||||||||||||| || |||||||||||||| |||||||||||||||||||||| |||||    
T  15066186 tcctcataaattctacagctgttcaccaactcggagaaaactcggatctattggtatccaattg 15066249  T

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Target: chr3; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 343 - 422
Target Start/End: Complemental strand, 25811141 - 25811063
Alignment:
Q  343 gtacaatggatagttgtacgctgcgttcgggaaggatgaatcgctcccgaaaaggaatctattgattctctcccaattgg 422  Q
    |||||||||||||||||| |||||||||||||| || |||||||| |||||||||| ||| || |||||||| |||||||    
T  25811141 gtacaatggatagttgtatgctgcgttcgggaatgacgaatcgct-ccgaaaaggattctttttattctctctcaattgg 25811063  T

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Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 299
Target Start/End: Complemental strand, 14873600 - 14873537
Alignment:
Q  236 tcctcataaattctacaactattcaccaactcggaaaaaactcggatctattggtatctaattg 299  Q
    |||||||| || || ||||| ||||||||||| || |||||||||||||||||||||| |||||    
T  14873600 tcctcatatatcctgcaactgttcaccaactcagagaaaactcggatctattggtatccaattg 14873537  T

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Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 236 - 293
Target Start/End: Original strand, 11861468 - 11861525
Alignment:
Q  236 tcctcataaattctacaactattcaccaactcggaaaaaactcggatctattggtatc 293  Q
    |||||||| |||||||| |||||||||||||| | |||||||| ||||| ||||||||    
T  11861468 tcctcatagattctacagctattcaccaactcaggaaaaactcagatctgttggtatc 11861525  T

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Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 299
Target Start/End: Complemental strand, 23079029 - 23078969
Alignment:
Q  239 tcataaattctacaactattcaccaactcggaaaaaactcggatctattggtatctaattg 299  Q
    |||||||| || ||||| |||||||||||||| |||||||| |||| |||||| |||||||    
T  23079029 tcataaatcctgcaactgttcaccaactcggagaaaactcgaatctgttggtacctaattg 23078969  T

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Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 236 - 292
Target Start/End: Complemental strand, 16803962 - 16803906
Alignment:
Q  236 tcctcataaattctacaactattcaccaactcggaaaaaactcggatctattggtat 292  Q
    |||||||||||||| || ||||| ||||| || | |||||||||||||| |||||||    
T  16803962 tcctcataaattctgcagctattaaccaaatcaggaaaaactcggatctgttggtat 16803906  T

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Target: chr5 (Bit Score: 94; Significance: 1e-45; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 317 - 422
Target Start/End: Original strand, 34654615 - 34654720
Alignment:
Q  317 ggaaacaagcacacttggagagcgcagtacaatggatagttgtacgctgcgttcgggaaggatgaatcgctcccgaaaaggaatctattgattctctccc 416  Q
    |||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34654615 ggaaacaagcacacatggagagcgcaatacaatggatagttgtatgctgcgttcgggaaggatgaatcgctcccgaaaaggaatctattgattctctccc 34654714  T
Q  417 aattgg 422  Q
    ||||||    
T  34654715 aattgg 34654720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 236 - 299
Target Start/End: Original strand, 23526479 - 23526542
Alignment:
Q  236 tcctcataaattctacaactattcaccaactcggaaaaaactcggatctattggtatctaattg 299  Q
    ||||||||||| || ||||| |||||||||||||| ||||||||||||| |||||||| |||||    
T  23526479 tcctcataaatcctgcaactgttcaccaactcggagaaaactcggatctgttggtatccaattg 23526542  T

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Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 299
Target Start/End: Original strand, 20804025 - 20804088
Alignment:
Q  236 tcctcataaattctacaactattcaccaactcggaaaaaactcggatctattggtatctaattg 299  Q
    |||||||| ||||| || ||||| |||||||| | |||||||||||||| ||||||||| ||||    
T  20804025 tcctcatagattctgcagctatttaccaactcaggaaaaactcggatctgttggtatctgattg 20804088  T

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Target: chr1 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 317 - 422
Target Start/End: Original strand, 3856366 - 3856471
Alignment:
Q  317 ggaaacaagcacacttggagagcgcagtacaatggatagttgtacgctgcgttcgggaaggatgaatcgctcccgaaaaggaatctattgattctctccc 416  Q
    |||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||| |||||||||||| ||    
T  3856366 ggaaacaagcacacttggagagagcagtacaatggatagttgtatgttgcgttcgggaaggatgaatcgctcccgaataggaatttattgattctcttcc 3856465  T
Q  417 aattgg 422  Q
    ||||||    
T  3856466 aattgg 3856471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 293
Target Start/End: Complemental strand, 22435591 - 22435534
Alignment:
Q  236 tcctcataaattctacaactattcaccaactcggaaaaaactcggatctattggtatc 293  Q
    |||||||| ||||||||  | ||||||||||||| ||||||| |||||| ||||||||    
T  22435591 tcctcatagattctacagttgttcaccaactcgggaaaaacttggatctgttggtatc 22435534  T

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Target: scaffold0410 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 236 - 293
Target Start/End: Original strand, 666 - 723
Alignment:
Q  236 tcctcataaattctacaactattcaccaactcggaaaaaactcggatctattggtatc 293  Q
    |||||||||||||| |||||||||||||||||||| ||||||| ||||| ||||||||    
T  666 tcctcataaattctgcaactattcaccaactcggagaaaactcagatctgttggtatc 723  T

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Target: scaffold0029 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 235 - 299
Target Start/End: Original strand, 8738 - 8802
Alignment:
Q  235 atcctcataaattctacaactattcaccaactcggaaaaaactcggatctattggtatctaattg 299  Q
    ||||||||||||||| ||||| ||||||| |||||| ||||||||||||| |||||||| |||||    
T  8738 atcctcataaattctgcaactgttcaccagctcggagaaaactcggatctgttggtatccaattg 8802  T

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Target: scaffold0080 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 236 - 299
Target Start/End: Original strand, 32404 - 32467
Alignment:
Q  236 tcctcataaattctacaactattcaccaactcggaaaaaactcggatctattggtatctaattg 299  Q
    |||||||||||||| ||||| |||||||||| ||| ||||||||||||| |||||||| |||||    
T  32404 tcctcataaattctgcaactgttcaccaacttggagaaaactcggatctgttggtatccaattg 32467  T

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Target: scaffold0064 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 236 - 299
Target Start/End: Complemental strand, 66309 - 66246
Alignment:
Q  236 tcctcataaattctacaactattcaccaactcggaaaaaactcggatctattggtatctaattg 299  Q
    ||||||||||||||||| || ||||| |||||||| ||||||||||||| |||||||| |||||    
T  66309 tcctcataaattctacagctgttcacgaactcggagaaaactcggatctgttggtatccaattg 66246  T

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Target: scaffold0042 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 236 - 299
Target Start/End: Complemental strand, 36599 - 36536
Alignment:
Q  236 tcctcataaattctacaactattcaccaactcggaaaaaactcggatctattggtatctaattg 299  Q
    |||||||||||||| ||||| |||||||||||||| ||||||| ||||| |||||||| |||||    
T  36599 tcctcataaattctgcaactgttcaccaactcggagaaaactcagatctgttggtatccaattg 36536  T

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Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 236 - 299
Target Start/End: Complemental strand, 21163749 - 21163686
Alignment:
Q  236 tcctcataaattctacaactattcaccaactcggaaaaaactcggatctattggtatctaattg 299  Q
    ||||||||||| || ||||| |||||||||||||| ||||||||||||| |||||||| |||||    
T  21163749 tcctcataaatcctgcaactgttcaccaactcggagaaaactcggatctgttggtatccaattg 21163686  T

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Target: scaffold0023 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 242 - 299
Target Start/End: Complemental strand, 30347 - 30290
Alignment:
Q  242 taaattctacaactattcaccaactcggaaaaaactcggatctattggtatctaattg 299  Q
    |||||||||||||| |||||||||||| | ||||||||||||| |||||||| |||||    
T  30347 taaattctacaactgttcaccaactcgaagaaaactcggatctgttggtatccaattg 30290  T

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Target: scaffold0297 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 291
Target Start/End: Complemental strand, 7436 - 7381
Alignment:
Q  236 tcctcataaattctacaactattcaccaactcggaaaaaactcggatctattggta 291  Q
    ||||||||||| || ||||| |||||||||||||| ||||||||||||| ||||||    
T  7436 tcctcataaatcctgcaactgttcaccaactcggagaaaactcggatctgttggta 7381  T

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Target: scaffold0081 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 299
Target Start/End: Original strand, 22129 - 22192
Alignment:
Q  236 tcctcataaattctacaactattcaccaactcggaaaaaactcggatctattggtatctaattg 299  Q
    ||||||||||| || ||||| |||||||||| ||| ||||||||||||| |||||||| |||||    
T  22129 tcctcataaatcctgcaactgttcaccaacttggagaaaactcggatctgttggtatccaattg 22192  T

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Target: scaffold0081; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 299
Target Start/End: Original strand, 37553 - 37616
Alignment:
Q  236 tcctcataaattctacaactattcaccaactcggaaaaaactcggatctattggtatctaattg 299  Q
    ||||||||||| || ||||| |||||||||| ||| ||||||||||||| |||||||| |||||    
T  37553 tcctcataaatcctgcaactgttcaccaacttggagaaaactcggatctgttggtatccaattg 37616  T

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Target: scaffold0034 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 236 - 293
Target Start/End: Complemental strand, 121955 - 121898
Alignment:
Q  236 tcctcataaattctacaactattcaccaactcggaaaaaactcggatctattggtatc 293  Q
    |||||||| ||||| || |||||||||||||| | |||||||||||||| ||||||||    
T  121955 tcctcatagattctgcagctattcaccaactcaggaaaaactcggatctgttggtatc 121898  T

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Target: scaffold0501 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 291
Target Start/End: Original strand, 448 - 504
Alignment:
Q  235 atcctcataaattctacaactattcaccaactcggaaaaaactcggatctattggta 291  Q
    |||||||||||| ||  ||||| ||||||||||||| ||||||||||||| ||||||    
T  448 atcctcataaatcctgaaactactcaccaactcggagaaaactcggatcttttggta 504  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 236 - 294
Target Start/End: Complemental strand, 229631 - 229573
Alignment:
Q  236 tcctcataaattctacaactattcaccaactcggaaaaaactcggatctattggtatct 294  Q
    |||||||||||||| || ||||| ||||| || | |||||||||||||| |||||||||    
T  229631 tcctcataaattctgcagctattaaccaaatcaggaaaaactcggatctgttggtatct 229573  T

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Target: scaffold0044 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 293
Target Start/End: Original strand, 17685 - 17742
Alignment:
Q  236 tcctcataaattctacaactattcaccaactcggaaaaaactcggatctattggtatc 293  Q
    |||||||||||||| || ||||| ||||| || | |||||||||||||| ||||||||    
T  17685 tcctcataaattctgcagctattaaccaaatcaggaaaaactcggatctgttggtatc 17742  T

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Target: chr7 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 293
Target Start/End: Original strand, 9591849 - 9591906
Alignment:
Q  236 tcctcataaattctacaactattcaccaactcggaaaaaactcggatctattggtatc 293  Q
    |||||||| ||||| || ||||||||||| || | |||||||||||||| ||||||||    
T  9591849 tcctcatagattctgcagctattcaccaaatcaggaaaaactcggatctgttggtatc 9591906  T

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