View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: F9655H-LTR4-TNT-insertion-6 (Length: 472)

Name: F9655H-LTR4-TNT-insertion-6
Description: F9655H-LTR4
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] F9655H-LTR4-TNT-insertion-6
F9655H-LTR4-TNT-insertion-6
[»] chr7 (35 HSPs)
chr7 (11-309)||(24559027-24559325)
chr7 (303-462)||(14043238-14043397)
chr7 (303-462)||(14353268-14353427)
chr7 (332-464)||(9591936-9592068)
chr7 (311-462)||(15145491-15145642)
chr7 (335-462)||(12691073-12691200)
chr7 (332-462)||(48810661-48810791)
chr7 (332-464)||(11984564-11984696)
chr7 (345-462)||(14958090-14958207)
chr7 (379-462)||(11526925-11527008)
chr7 (335-462)||(11549673-11549800)
chr7 (335-464)||(14335968-14336097)
chr7 (335-464)||(18181314-18181443)
chr7 (335-464)||(44787920-44788049)
chr7 (335-462)||(15157628-15157755)
chr7 (392-462)||(17703032-17703102)
chr7 (335-464)||(8711177-8711306)
chr7 (335-464)||(18586740-18586869)
chr7 (303-459)||(15628067-15628223)
chr7 (332-462)||(11233784-11233914)
chr7 (392-462)||(16726018-16726088)
chr7 (332-435)||(12203373-12203476)
chr7 (404-464)||(10874093-10874153)
chr7 (303-438)||(12798074-12798209)
chr7 (335-462)||(13689613-13689740)
chr7 (303-440)||(14260814-14260951)
chr7 (332-456)||(15114762-15114886)
chr7 (311-438)||(18050523-18050650)
chr7 (311-456)||(14145213-14145358)
chr7 (332-456)||(13677018-13677142)
chr7 (332-440)||(19150584-19150692)
chr7 (332-440)||(20749983-20750091)
chr7 (331-438)||(13024916-13025023)
chr7 (332-438)||(15810779-15810885)
chr7 (329-438)||(16947042-16947151)
[»] chr2 (38 HSPs)
chr2 (303-464)||(23104824-23104985)
chr2 (303-464)||(20321165-20321326)
chr2 (303-464)||(22742063-22742224)
chr2 (303-462)||(22732873-22733032)
chr2 (303-464)||(23039670-23039835)
chr2 (303-462)||(21320102-21320261)
chr2 (303-462)||(23028561-23028720)
chr2 (303-462)||(23029946-23030105)
chr2 (335-462)||(23065592-23065719)
chr2 (335-462)||(23075042-23075169)
chr2 (303-464)||(24678672-24678833)
chr2 (332-462)||(24704581-24704711)
chr2 (332-462)||(22462580-22462710)
chr2 (332-464)||(24873850-24873982)
chr2 (332-459)||(24656760-24656887)
chr2 (332-464)||(23116156-23116288)
chr2 (335-464)||(27374483-27374612)
chr2 (335-464)||(9338796-9338925)
chr2 (335-464)||(9487430-9487559)
chr2 (335-464)||(16931721-16931850)
chr2 (335-464)||(16984454-16984583)
chr2 (335-464)||(17002214-17002343)
chr2 (335-462)||(24265584-24265711)
chr2 (332-429)||(24816971-24817069)
chr2 (359-464)||(10872088-10872193)
chr2 (332-438)||(28351089-28351195)
chr2 (335-464)||(22322442-22322571)
chr2 (335-462)||(24713248-24713375)
chr2 (359-462)||(44382672-44382775)
chr2 (380-462)||(45534768-45534850)
chr2 (303-456)||(19818006-19818159)
chr2 (311-438)||(12577546-12577673)
chr2 (331-440)||(20848799-20848908)
chr2 (362-464)||(23097115-23097217)
chr2 (380-426)||(30208056-30208102)
chr2 (311-440)||(19716138-19716267)
chr2 (311-440)||(19720701-19720830)
chr2 (303-456)||(23274778-23274931)
[»] chr6 (43 HSPs)
chr6 (303-462)||(19868036-19868195)
chr6 (304-462)||(22437288-22437446)
chr6 (303-464)||(23081841-23082002)
chr6 (303-462)||(21765230-21765389)
chr6 (335-462)||(18404640-18404767)
chr6 (303-462)||(18182091-18182250)
chr6 (332-462)||(25756319-25756449)
chr6 (332-462)||(27558673-27558803)
chr6 (332-464)||(22829091-22829223)
chr6 (332-462)||(5835935-5836065)
chr6 (309-455)||(18660343-18660489)
chr6 (332-464)||(25115999-25116131)
chr6 (303-454)||(18326275-18326426)
chr6 (335-464)||(29589144-29589273)
chr6 (332-462)||(2871509-2871639)
chr6 (376-462)||(19666937-19667023)
chr6 (303-424)||(25958495-25958616)
chr6 (359-462)||(28259904-28260007)
chr6 (359-462)||(28285909-28286012)
chr6 (359-462)||(28338653-28338756)
chr6 (335-464)||(16575337-16575466)
chr6 (335-464)||(16619914-16620043)
chr6 (311-456)||(19456449-19456594)
chr6 (311-456)||(19466594-19466739)
chr6 (335-462)||(24292489-24292616)
chr6 (359-462)||(28313101-28313204)
chr6 (333-459)||(23084532-23084658)
chr6 (335-464)||(27206069-27206198)
chr6 (335-464)||(27243030-27243159)
chr6 (386-462)||(27558520-27558596)
chr6 (376-440)||(30677759-30677823)
chr6 (311-456)||(19438428-19438573)
chr6 (303-440)||(24515150-24515287)
chr6 (303-455)||(18798108-18798260)
chr6 (303-438)||(8720433-8720568)
chr6 (303-438)||(16814058-16814193)
chr6 (332-393)||(19486067-19486128)
chr6 (359-440)||(20010227-20010308)
chr6 (311-440)||(14376642-14376771)
chr6 (311-372)||(24367826-24367887)
chr6 (303-452)||(25771262-25771411)
chr6 (303-452)||(34642299-34642448)
chr6 (311-399)||(15462762-15462850)
[»] scaffold0540 (1 HSPs)
scaffold0540 (303-464)||(10440-10601)
[»] scaffold0411 (1 HSPs)
scaffold0411 (303-464)||(8994-9155)
[»] scaffold0218 (1 HSPs)
scaffold0218 (303-461)||(24289-24447)
[»] scaffold0423 (1 HSPs)
scaffold0423 (323-464)||(1192-1333)
[»] scaffold0403 (2 HSPs)
scaffold0403 (303-464)||(15494-15655)
scaffold0403 (386-462)||(234-310)
[»] scaffold0102 (1 HSPs)
scaffold0102 (303-463)||(49906-50066)
[»] scaffold0297 (1 HSPs)
scaffold0297 (303-462)||(7219-7378)
[»] scaffold0022 (3 HSPs)
scaffold0022 (303-462)||(34334-34492)
scaffold0022 (311-462)||(42223-42374)
scaffold0022 (311-462)||(75943-76094)
[»] chr8 (35 HSPs)
chr8 (303-462)||(19981587-19981746)
chr8 (303-462)||(18880659-18880818)
chr8 (311-464)||(21390861-21391014)
chr8 (311-464)||(21780187-21780340)
chr8 (303-462)||(21163532-21163691)
chr8 (303-462)||(21672135-21672294)
chr8 (303-462)||(22420895-22421054)
chr8 (332-464)||(15537032-15537164)
chr8 (332-464)||(17829970-17830102)
chr8 (332-464)||(32603794-32603926)
chr8 (303-462)||(22990665-22990815)
chr8 (332-459)||(3274754-3274881)
chr8 (380-462)||(22043515-22043597)
chr8 (332-462)||(22117180-22117310)
chr8 (335-464)||(19116049-19116178)
chr8 (335-464)||(20015266-20015395)
chr8 (333-462)||(22125964-22126093)
chr8 (392-464)||(22114405-22114477)
chr8 (303-437)||(21929048-21929182)
chr8 (332-462)||(30310146-30310276)
chr8 (359-464)||(17671025-17671130)
chr8 (335-462)||(18860226-18860353)
chr8 (399-462)||(22524129-22524192)
chr8 (380-462)||(22710272-22710354)
chr8 (359-464)||(19481076-19481181)
chr8 (332-456)||(21998448-21998572)
chr8 (332-459)||(6606474-6606601)
chr8 (334-456)||(22027288-22027410)
chr8 (332-429)||(20391735-20391832)
chr8 (332-456)||(21981962-21982086)
chr8 (332-456)||(22004089-22004213)
chr8 (303-374)||(1757879-1757950)
chr8 (332-438)||(16268250-16268356)
chr8 (425-462)||(17354900-17354937)
chr8 (329-434)||(29300456-29300561)
[»] chr4 (32 HSPs)
chr4 (303-462)||(15144248-15144406)
chr4 (311-462)||(16241409-16241560)
chr4 (303-462)||(16219742-16219901)
chr4 (303-462)||(15335-15494)
chr4 (303-462)||(14163024-14163183)
chr4 (332-462)||(16247975-16248105)
chr4 (303-462)||(16350041-16350200)
chr4 (303-429)||(16223062-16223188)
chr4 (303-462)||(8590-8749)
chr4 (303-462)||(14700013-14700172)
chr4 (332-464)||(13513933-13514065)
chr4 (332-464)||(18604116-18604248)
chr4 (335-464)||(8049923-8050052)
chr4 (335-464)||(8389995-8390124)
chr4 (335-464)||(12480183-12480312)
chr4 (335-464)||(17091449-17091578)
chr4 (335-464)||(23959330-23959459)
chr4 (335-462)||(14300281-14300408)
chr4 (332-462)||(18223772-18223902)
chr4 (335-464)||(19775093-19775222)
chr4 (332-464)||(40476620-40476752)
chr4 (335-462)||(16233294-16233421)
chr4 (335-459)||(19635719-19635843)
chr4 (332-438)||(14992966-14993072)
chr4 (311-440)||(27903946-27904075)
chr4 (311-464)||(51603349-51603502)
chr4 (311-464)||(53750027-53750180)
chr4 (332-459)||(13879692-13879819)
chr4 (329-438)||(11203815-11203924)
chr4 (403-456)||(16151290-16151343)
chr4 (403-456)||(16155436-16155489)
chr4 (311-372)||(44658515-44658576)
[»] scaffold0114 (1 HSPs)
scaffold0114 (302-456)||(16917-17071)
[»] chr5 (44 HSPs)
chr5 (303-464)||(21883263-21883424)
chr5 (303-462)||(23474680-23474839)
chr5 (322-462)||(25429925-25430065)
chr5 (303-462)||(23526537-23526696)
chr5 (332-462)||(23461419-23461549)
chr5 (303-464)||(21331728-21331889)
chr5 (332-462)||(20804112-20804242)
chr5 (313-459)||(21631143-21631289)
chr5 (335-462)||(37288240-37288367)
chr5 (359-464)||(22351458-22351563)
chr5 (335-464)||(27521921-27522050)
chr5 (335-462)||(22329631-22329758)
chr5 (332-462)||(18782629-18782759)
chr5 (335-464)||(16360017-16360146)
chr5 (335-464)||(27613871-27614000)
chr5 (335-464)||(27665245-27665374)
chr5 (335-464)||(34570009-34570138)
chr5 (335-464)||(40712295-40712424)
chr5 (335-462)||(14996483-14996610)
chr5 (335-462)||(29472817-29472944)
chr5 (332-462)||(22138180-22138310)
chr5 (332-462)||(23536956-23537086)
chr5 (335-462)||(27682144-27682271)
chr5 (332-438)||(21560790-21560896)
chr5 (335-464)||(19773475-19773604)
chr5 (332-464)||(43122964-43123096)
chr5 (332-438)||(16257801-16257907)
chr5 (332-438)||(22591520-22591626)
chr5 (332-438)||(22595075-22595181)
chr5 (359-440)||(22465474-22465555)
chr5 (341-462)||(41774364-41774485)
chr5 (311-399)||(20824929-20825017)
chr5 (332-438)||(23077670-23077776)
chr5 (303-440)||(14883754-14883891)
chr5 (332-464)||(23670129-23670261)
chr5 (332-440)||(28891705-28891813)
chr5 (380-426)||(21410695-21410741)
chr5 (303-440)||(21870041-21870178)
chr5 (303-440)||(21874321-21874458)
chr5 (304-365)||(26735566-26735627)
chr5 (332-440)||(20770635-20770743)
chr5 (332-440)||(20779410-20779518)
chr5 (332-440)||(28911551-28911659)
chr5 (332-440)||(28926819-28926927)
[»] scaffold0080 (4 HSPs)
scaffold0080 (303-462)||(55220-55379)
scaffold0080 (303-462)||(32462-32621)
scaffold0080 (332-416)||(9703-9787)
scaffold0080 (332-420)||(9843-9931)
[»] scaffold0017 (3 HSPs)
scaffold0017 (303-464)||(194428-194589)
scaffold0017 (332-462)||(16628-16758)
scaffold0017 (332-462)||(21150-21280)
[»] scaffold0490 (2 HSPs)
scaffold0490 (303-462)||(474-633)
scaffold0490 (303-440)||(3448-3585)
[»] scaffold0358 (1 HSPs)
scaffold0358 (303-462)||(9530-9689)
[»] scaffold0120 (2 HSPs)
scaffold0120 (311-462)||(11854-12005)
scaffold0120 (303-462)||(14667-14826)
[»] chr1 (34 HSPs)
chr1 (303-462)||(20081008-20081166)
chr1 (335-462)||(22402193-22402320)
chr1 (303-462)||(21752616-21752775)
chr1 (344-462)||(22459634-22459752)
chr1 (344-462)||(22470063-22470181)
chr1 (303-462)||(22117283-22117442)
chr1 (332-462)||(24784489-24784619)
chr1 (335-460)||(19109967-19110092)
chr1 (332-464)||(22435372-22435504)
chr1 (332-464)||(17041645-17041777)
chr1 (332-464)||(21842807-21842939)
chr1 (332-464)||(22400915-22401047)
chr1 (303-462)||(21044785-21044944)
chr1 (303-462)||(16379663-16379822)
chr1 (332-462)||(21176965-21177095)
chr1 (332-426)||(21228223-21228317)
chr1 (335-464)||(16347226-16347355)
chr1 (335-464)||(16353875-16354004)
chr1 (335-464)||(51330124-51330253)
chr1 (332-459)||(18273396-18273523)
chr1 (311-456)||(19857882-19858027)
chr1 (303-464)||(20922008-20922169)
chr1 (303-438)||(21742207-21742342)
chr1 (303-456)||(20832538-20832691)
chr1 (303-440)||(21738689-21738826)
chr1 (359-464)||(33387661-33387766)
chr1 (335-462)||(21833900-21834027)
chr1 (359-440)||(20853413-20853494)
chr1 (359-464)||(41350301-41350406)
chr1 (303-348)||(22496001-22496046)
chr1 (329-440)||(20074362-20074473)
chr1 (329-438)||(38909481-38909590)
chr1 (332-440)||(16670561-16670669)
chr1 (303-423)||(22015415-22015535)
[»] scaffold0718 (1 HSPs)
scaffold0718 (328-462)||(6564-6698)
[»] scaffold0040 (2 HSPs)
scaffold0040 (303-464)||(110467-110628)
scaffold0040 (303-459)||(18428-18584)
[»] scaffold0395 (1 HSPs)
scaffold0395 (303-462)||(16085-16244)
[»] scaffold0042 (2 HSPs)
scaffold0042 (303-462)||(36382-36541)
scaffold0042 (303-459)||(26935-27091)
[»] scaffold0198 (1 HSPs)
scaffold0198 (303-462)||(30870-31029)
[»] chr3 (64 HSPs)
chr3 (303-462)||(15066244-15066403)
chr3 (303-462)||(17497864-17498023)
chr3 (303-462)||(14873383-14873542)
chr3 (303-462)||(19727932-19728091)
chr3 (332-462)||(12502146-12502276)
chr3 (303-462)||(15459224-15459379)
chr3 (304-426)||(23078851-23078973)
chr3 (332-464)||(15359251-15359383)
chr3 (303-462)||(15262803-15262953)
chr3 (303-462)||(15263615-15263765)
chr3 (332-462)||(11861555-11861685)
chr3 (303-462)||(12842909-12843060)
chr3 (332-462)||(23414588-23414718)
chr3 (332-462)||(24186389-24186519)
chr3 (303-459)||(13028147-13028303)
chr3 (332-464)||(16803743-16803875)
chr3 (303-459)||(12508355-12508511)
chr3 (332-464)||(53381818-53381950)
chr3 (332-462)||(16695366-16695496)
chr3 (335-464)||(10008802-10008931)
chr3 (335-464)||(10909412-10909541)
chr3 (303-460)||(14578221-14578378)
chr3 (335-464)||(15586191-15586320)
chr3 (335-464)||(48428649-48428778)
chr3 (332-464)||(12889908-12890040)
chr3 (332-464)||(15399317-15399449)
chr3 (335-464)||(16638975-16639104)
chr3 (335-464)||(43165877-43166006)
chr3 (335-464)||(3689145-3689274)
chr3 (335-464)||(5108338-5108467)
chr3 (335-464)||(5110208-5110337)
chr3 (335-464)||(13255892-13256021)
chr3 (335-464)||(20058853-20058982)
chr3 (335-464)||(26790212-26790341)
chr3 (332-464)||(6597254-6597386)
chr3 (332-464)||(6603934-6604066)
chr3 (332-464)||(16753500-16753632)
chr3 (335-462)||(15712857-15712984)
chr3 (359-464)||(15345044-15345149)
chr3 (332-464)||(5421729-5421861)
chr3 (303-459)||(35983364-35983520)
chr3 (333-464)||(13317354-13317485)
chr3 (303-438)||(14290343-14290478)
chr3 (332-438)||(12181556-12181662)
chr3 (305-423)||(17739067-17739185)
chr3 (305-423)||(19040387-19040505)
chr3 (329-438)||(2036723-2036832)
chr3 (329-438)||(2040464-2040573)
chr3 (329-438)||(14039955-14040064)
chr3 (303-438)||(16825090-16825225)
chr3 (311-438)||(17494841-17494968)
chr3 (329-440)||(47127153-47127264)
chr3 (332-438)||(15230815-15230921)
chr3 (332-438)||(15236683-15236789)
chr3 (311-456)||(18131140-18131285)
chr3 (332-440)||(10416854-10416962)
chr3 (380-464)||(13249291-13249375)
chr3 (311-438)||(8744201-8744328)
chr3 (311-456)||(16384165-16384310)
chr3 (332-464)||(13945236-13945368)
chr3 (332-456)||(31942115-31942239)
chr3 (332-423)||(2245498-2245589)
chr3 (311-438)||(16831339-16831466)
chr3 (303-455)||(24190486-24190638)
[»] scaffold0081 (2 HSPs)
scaffold0081 (303-462)||(22187-22346)
scaffold0081 (303-462)||(37611-37770)
[»] scaffold0064 (1 HSPs)
scaffold0064 (303-462)||(66092-66251)
[»] scaffold0029 (3 HSPs)
scaffold0029 (303-462)||(8797-8956)
scaffold0029 (335-464)||(107337-107466)
scaffold0029 (332-452)||(93466-93586)
[»] scaffold0006 (1 HSPs)
scaffold0006 (303-462)||(104809-104968)
[»] scaffold1274 (1 HSPs)
scaffold1274 (303-462)||(200-359)
[»] scaffold0075 (2 HSPs)
scaffold0075 (303-462)||(55033-55192)
scaffold0075 (303-462)||(48313-48472)
[»] scaffold0023 (3 HSPs)
scaffold0023 (303-462)||(30136-30295)
scaffold0023 (311-462)||(43015-43166)
scaffold0023 (334-458)||(163967-164091)
[»] scaffold0413 (1 HSPs)
scaffold0413 (334-458)||(4156-4280)
[»] scaffold0819 (1 HSPs)
scaffold0819 (332-459)||(715-842)
[»] scaffold0393 (1 HSPs)
scaffold0393 (303-462)||(14-173)
[»] scaffold0319 (1 HSPs)
scaffold0319 (302-429)||(7082-7209)
[»] scaffold0289 (1 HSPs)
scaffold0289 (303-462)||(371-530)
[»] scaffold0012 (1 HSPs)
scaffold0012 (303-462)||(215982-216141)
[»] scaffold0285 (1 HSPs)
scaffold0285 (332-462)||(5610-5740)
[»] scaffold0280 (1 HSPs)
scaffold0280 (332-462)||(23788-23918)
[»] scaffold0122 (1 HSPs)
scaffold0122 (356-462)||(40159-40265)
[»] scaffold0278 (1 HSPs)
scaffold0278 (314-462)||(4145-4293)
[»] scaffold0621 (2 HSPs)
scaffold0621 (311-462)||(608-759)
scaffold0621 (311-462)||(5025-5176)
[»] scaffold0342 (1 HSPs)
scaffold0342 (303-462)||(13827-13986)
[»] scaffold0177 (2 HSPs)
scaffold0177 (303-462)||(10918-11077)
scaffold0177 (303-462)||(14603-14762)
[»] scaffold0084 (1 HSPs)
scaffold0084 (303-462)||(8806-8965)
[»] scaffold0079 (1 HSPs)
scaffold0079 (303-462)||(37081-37240)
[»] scaffold0010 (3 HSPs)
scaffold0010 (303-462)||(5498-5657)
scaffold0010 (332-462)||(15036-15166)
scaffold0010 (332-456)||(38903-39027)
[»] scaffold1881 (1 HSPs)
scaffold1881 (332-462)||(42-172)
[»] scaffold1459 (1 HSPs)
scaffold1459 (332-462)||(654-784)
[»] scaffold0575 (1 HSPs)
scaffold0575 (332-462)||(10231-10361)
[»] scaffold0451 (1 HSPs)
scaffold0451 (332-462)||(13592-13722)
[»] scaffold0357 (1 HSPs)
scaffold0357 (332-462)||(17539-17669)
[»] scaffold0305 (1 HSPs)
scaffold0305 (332-462)||(3476-3606)
[»] scaffold0071 (1 HSPs)
scaffold0071 (303-462)||(2812-2967)
[»] scaffold0090 (1 HSPs)
scaffold0090 (369-462)||(30561-30654)
[»] scaffold0109 (2 HSPs)
scaffold0109 (332-464)||(41764-41896)
scaffold0109 (332-462)||(12686-12816)
[»] scaffold0270 (2 HSPs)
scaffold0270 (303-462)||(7456-7615)
scaffold0270 (303-462)||(14586-14745)
[»] scaffold0243 (2 HSPs)
scaffold0243 (303-462)||(23507-23666)
scaffold0243 (311-456)||(9342-9487)
[»] scaffold0207 (1 HSPs)
scaffold0207 (311-426)||(4153-4268)
[»] scaffold0011 (1 HSPs)
scaffold0011 (303-462)||(23095-23254)
[»] scaffold0034 (3 HSPs)
scaffold0034 (332-462)||(121738-121868)
scaffold0034 (338-440)||(70990-71092)
scaffold0034 (377-456)||(11474-11553)
[»] scaffold0009 (1 HSPs)
scaffold0009 (332-462)||(229414-229544)
[»] scaffold1220 (1 HSPs)
scaffold1220 (332-464)||(348-480)
[»] scaffold0789 (1 HSPs)
scaffold0789 (332-464)||(536-668)
[»] scaffold0161 (1 HSPs)
scaffold0161 (303-459)||(36366-36522)
[»] scaffold0028 (3 HSPs)
scaffold0028 (332-464)||(12061-12193)
scaffold0028 (335-462)||(55616-55743)
scaffold0028 (332-464)||(21589-21721)
[»] scaffold0273 (1 HSPs)
scaffold0273 (303-462)||(623-773)
[»] scaffold0007 (2 HSPs)
scaffold0007 (335-462)||(49277-49404)
scaffold0007 (305-423)||(162609-162727)
[»] scaffold2059 (1 HSPs)
scaffold2059 (332-462)||(331-461)
[»] scaffold0293 (1 HSPs)
scaffold0293 (332-438)||(16022-16128)
[»] scaffold0259 (1 HSPs)
scaffold0259 (341-462)||(8876-8997)
[»] scaffold0431 (1 HSPs)
scaffold0431 (332-464)||(10976-11108)
[»] scaffold0410 (1 HSPs)
scaffold0410 (332-462)||(753-883)
[»] scaffold0044 (2 HSPs)
scaffold0044 (332-462)||(17772-17902)
scaffold0044 (335-462)||(4036-4163)
[»] scaffold0671 (1 HSPs)
scaffold0671 (332-429)||(3561-3658)
[»] scaffold0505 (1 HSPs)
scaffold0505 (313-426)||(2344-2457)
[»] scaffold0501 (1 HSPs)
scaffold0501 (303-428)||(507-632)
[»] scaffold0130 (1 HSPs)
scaffold0130 (341-462)||(7341-7462)
[»] scaffold0309 (1 HSPs)
scaffold0309 (303-395)||(19981-20073)
[»] scaffold0100 (1 HSPs)
scaffold0100 (332-440)||(16193-16301)
[»] scaffold0019 (1 HSPs)
scaffold0019 (358-462)||(171757-171861)
[»] scaffold0008 (2 HSPs)
scaffold0008 (332-464)||(139170-139302)
scaffold0008 (392-464)||(521-593)
[»] scaffold0230 (1 HSPs)
scaffold0230 (303-454)||(17929-18080)
[»] scaffold1423 (1 HSPs)
scaffold1423 (303-401)||(1-99)
[»] scaffold0018 (2 HSPs)
scaffold0018 (303-429)||(22893-23019)
scaffold0018 (332-429)||(8945-9043)
[»] scaffold0266 (1 HSPs)
scaffold0266 (303-440)||(17220-17357)
[»] scaffold0074 (2 HSPs)
scaffold0074 (313-462)||(6704-6853)
scaffold0074 (311-440)||(15663-15792)
[»] scaffold0429 (1 HSPs)
scaffold0429 (308-459)||(987-1138)
[»] scaffold0412 (2 HSPs)
scaffold0412 (383-462)||(15150-15229)
scaffold0412 (332-368)||(15235-15271)
[»] scaffold0055 (1 HSPs)
scaffold0055 (335-462)||(22859-22986)
[»] scaffold0052 (1 HSPs)
scaffold0052 (335-462)||(7848-7975)
[»] scaffold0546 (1 HSPs)
scaffold0546 (332-462)||(491-621)
[»] scaffold0001 (1 HSPs)
scaffold0001 (313-459)||(442245-442391)
[»] scaffold0282 (1 HSPs)
scaffold0282 (303-464)||(9682-9843)
[»] scaffold0035 (1 HSPs)
scaffold0035 (311-456)||(6395-6540)
[»] scaffold0476 (1 HSPs)
scaffold0476 (303-462)||(11350-11508)
[»] scaffold0180 (1 HSPs)
scaffold0180 (332-438)||(30614-30720)
[»] scaffold0586 (1 HSPs)
scaffold0586 (311-452)||(157-298)
[»] scaffold0447 (1 HSPs)
scaffold0447 (389-462)||(1574-1647)
[»] scaffold0383 (1 HSPs)
scaffold0383 (389-462)||(4438-4511)
[»] scaffold0331 (1 HSPs)
scaffold0331 (332-429)||(14598-14695)
[»] scaffold0529 (1 HSPs)
scaffold0529 (303-459)||(5671-5827)
[»] scaffold0507 (1 HSPs)
scaffold0507 (303-414)||(11611-11722)
[»] scaffold0333 (1 HSPs)
scaffold0333 (320-419)||(19247-19346)
[»] scaffold0148 (1 HSPs)
scaffold0148 (332-465)||(2611-2744)
[»] scaffold0848 (1 HSPs)
scaffold0848 (332-456)||(4579-4703)
[»] scaffold0046 (2 HSPs)
scaffold0046 (303-423)||(512-632)
scaffold0046 (303-438)||(70691-70826)
[»] scaffold0457 (1 HSPs)
scaffold0457 (311-462)||(13616-13767)
[»] scaffold0106 (1 HSPs)
scaffold0106 (311-438)||(34928-35055)
[»] scaffold0003 (2 HSPs)
scaffold0003 (383-450)||(424962-425029)
scaffold0003 (311-438)||(203972-204099)
[»] scaffold0947 (1 HSPs)
scaffold0947 (311-456)||(1117-1262)
[»] scaffold0765 (1 HSPs)
scaffold0765 (311-464)||(5817-5970)
[»] scaffold0523 (1 HSPs)
scaffold0523 (303-440)||(6020-6157)
[»] scaffold0053 (1 HSPs)
scaffold0053 (311-440)||(64906-65035)
[»] scaffold0335 (1 HSPs)
scaffold0335 (303-438)||(3890-4025)
[»] scaffold0192 (1 HSPs)
scaffold0192 (332-452)||(30138-30258)
[»] scaffold1032 (1 HSPs)
scaffold1032 (311-438)||(401-528)
[»] scaffold0108 (1 HSPs)
scaffold0108 (303-438)||(50688-50823)
[»] scaffold0098 (1 HSPs)
scaffold0098 (332-423)||(26072-26163)
[»] scaffold0067 (4 HSPs)
scaffold0067 (311-438)||(30215-30342)
scaffold0067 (311-439)||(48765-48893)
scaffold0067 (311-439)||(57799-57927)
scaffold0067 (311-439)||(64187-64315)
[»] scaffold0026 (1 HSPs)
scaffold0026 (303-438)||(52234-52369)
[»] scaffold0434 (1 HSPs)
scaffold0434 (332-438)||(5488-5594)
[»] scaffold0405 (1 HSPs)
scaffold0405 (332-438)||(6214-6320)
[»] scaffold0348 (1 HSPs)
scaffold0348 (311-453)||(4418-4560)
[»] scaffold2062 (1 HSPs)
scaffold2062 (311-456)||(440-585)
[»] scaffold0235 (2 HSPs)
scaffold0235 (311-440)||(8046-8175)
scaffold0235 (311-440)||(18260-18389)
[»] scaffold0181 (1 HSPs)
scaffold0181 (332-413)||(28539-28620)
[»] scaffold0020 (1 HSPs)
scaffold0020 (311-440)||(98167-98296)
[»] scaffold0005 (1 HSPs)
scaffold0005 (311-456)||(263817-263962)
[»] scaffold1600 (1 HSPs)
scaffold1600 (303-459)||(649-796)
[»] scaffold0585 (1 HSPs)
scaffold0585 (332-452)||(433-553)
[»] scaffold0518 (1 HSPs)
scaffold0518 (332-456)||(2443-2567)
[»] scaffold0317 (1 HSPs)
scaffold0317 (332-456)||(3237-3361)
[»] scaffold0076 (1 HSPs)
scaffold0076 (332-456)||(52991-53115)
[»] scaffold0004 (1 HSPs)
scaffold0004 (392-456)||(319915-319979)
[»] scaffold1914 (1 HSPs)
scaffold1914 (308-427)||(827-946)
[»] scaffold0679 (1 HSPs)
scaffold0679 (332-423)||(636-727)
[»] scaffold0367 (1 HSPs)
scaffold0367 (311-438)||(8607-8734)
[»] scaffold1530 (1 HSPs)
scaffold1530 (311-456)||(1095-1241)
[»] scaffold1517 (1 HSPs)
scaffold1517 (332-426)||(1085-1179)
[»] scaffold0609 (1 HSPs)
scaffold0609 (332-438)||(8169-8275)
[»] scaffold0031 (1 HSPs)
scaffold0031 (332-438)||(116236-116342)
[»] scaffold1433 (1 HSPs)
scaffold1433 (333-438)||(897-1002)
[»] scaffold0404 (1 HSPs)
scaffold0404 (333-438)||(8357-8462)
[»] scaffold0222 (1 HSPs)
scaffold0222 (359-456)||(21405-21502)
[»] scaffold0239 (1 HSPs)
scaffold0239 (392-456)||(9367-9431)


Alignment Details
Target: chr7 (Bit Score: 299; Significance: 1e-168; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 11 - 309
Target Start/End: Original strand, 24559027 - 24559325
Alignment:
Q  11 ggccctgcaaaattccacctaaaaagcaacgtagtatttacaagtaccctctctcactcacttgtctatctgttatgttactaccttttttcacaaacaa 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24559027 ggccctgcaaaattccacctaaaaagcaacgtagtatttacaagtaccctctctcactcacttgtctatctgttatgttactaccttttttcacaaacaa 24559126  T
Q  111 aactgcttcactctttgtccctttgtcaagtcttcactcatctaccactttgtcttttgaccaaaccctttattttttctttcttggtgtctgagaaatt 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24559127 aactgcttcactctttgtccctttgtcaagtcttcactcatctaccactttgtcttttgaccaaaccctttattttttctttcttggtgtctgagaaatt 24559226  T
Q  211 ctcacacaattttctttctgttcatgctttgtctcaagtctacaacaattaccttgataataacggttgcattaattattgtcattgtgtttcaattgc 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24559227 ctcacacaattttctttctgttcatgctttgtctcaagtctacaacaattaccttgataataacggttgcattaattattgtcattgtgtttcaattgc 24559325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 14043238 - 14043397
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||| |||||| |||||||  || ||||||||||| ||||| || || |||||||  |||||||||| ||| ||||||||||||||||| |||||    
T  14043238 caattgcccgcttgatctcagcacgcaaaccattctcaaatttgatacatttcgaaaactttgcagtctctgcagtatagtgcggataaaacttagccaa 14043337  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    |||||||||||||||||||||||| || || ||||||| |||||||||||||||||||||    
T  14043338 ttccacaaacttggcagcatactctgtcactgacatgtttccttgcttcagctcaaggaa 14043397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 14353268 - 14353427
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||| |||||| |||||||  || ||||||||||| ||||| || || |||||||  |||||||||| ||| ||||||||||||||||| |||||    
T  14353268 caattgcccgcttgatctcagcacgcaaaccattctcaaatttgatacatttcgaaaactttgcagtctctgcagtatagtgcggataaaacttagccaa 14353367  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    |||||||||||||||||||||||| || || ||||||| |||||||||||||||||||||    
T  14353368 ttccacaaacttggcagcatactctgtcactgacatgtttccttgcttcagctcaaggaa 14353427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 332 - 464
Target Start/End: Original strand, 9591936 - 9592068
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| ||||||||||| || || |||||||||||||| | ||||||||| ||||| ||||||||||| ||||||||||||||||||||||| || |    
T  9591936 ccattctcgaacttgatgcatttcgagaactcagcagtctcagcagtgtagtgtggatagaactttgccaactccacaaacttggcagcatactcggtca 9592035  T
Q  432 cagacatgtatccttgcttcagctcaaggaatt 464  Q
    | ||||||| |||||||||||||||||||||||    
T  9592036 ccgacatgtttccttgcttcagctcaaggaatt 9592068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 311 - 462
Target Start/End: Complemental strand, 15145642 - 15145491
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    ||||| || |||||||  ||| ||||||| |||||||| ||||| |||||||| |||||||| | ||| ||||||| ||||||||||||||||||||| |    
T  15145642 ctctttatctcagcacgcaactcattctcgaacttgatacacttagaaaactccgcagtctcagcagtatagtgcgaataaaactttgccaattccacta 15145543  T
Q  411 acttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||||||||||||| || ||||| | |||||||||||||||||||||    
T  15145542 acttggcagcatactcagtcacggacatatttccttgcttcagctcaaggaa 15145491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 335 - 462
Target Start/End: Original strand, 12691073 - 12691200
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| ||||||||||| || |||||||||| |||||||| ||  || |||||||||||||| ||||| || ||||||||||||||||||||||| ||||    
T  12691073 ttctcgaacttgatgcatttcgaaaactcagtagtctctgcagcataatgcggataaaacttcgccaactcaacaaacttggcagcatactcagtcacag 12691172  T
Q  435 acatgtatccttgcttcagctcaaggaa 462  Q
    |||| | ||||||||||| |||||||||    
T  12691173 acatatttccttgcttcaactcaaggaa 12691200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 48810791 - 48810661
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    ||||||||||| ||||||||||| || |||||| ||||||| | ||||||||||||||||||||| ||||  ||||||||||| ||||||||||| || |    
T  48810791 ccattctcaaatttgatgcacttggagaactcaacagtctcggcagtgtagtgcggataaaacttagccagctccacaaactttgcagcatactcggtca 48810692  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    | |||||||  || |||||||||||||||||    
T  48810691 ccgacatgtcaccctgcttcagctcaaggaa 48810661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 332 - 464
Target Start/End: Original strand, 11984564 - 11984696
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| ||||||||||| ||  | || ||||||||||| | ||  |||||||| || ||||||||||| ||||||||||||||||||||||| ||      
T  11984564 ccattctcgaacttgatgcatttcaagaattcagcagtctcagcagcatagtgcgggtagaactttgccaactccacaaacttggcagcatactctgtct 11984663  T
Q  432 cagacatgtatccttgcttcagctcaaggaatt 464  Q
    ||||||||| |||||||||||||||||||||||    
T  11984664 cagacatgtttccttgcttcagctcaaggaatt 11984696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 345 - 462
Target Start/End: Original strand, 14958090 - 14958207
Alignment:
Q  345 tgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacagacatgtatcc 444  Q
    ||||||| |||||||||||||||||||||| ||  || ||| |||||||||| ||||| || ||||||||||||||||||||||| || ||||| | |||    
T  14958090 tgatgcattttgaaaactcagcagtctctgcagcataatgcagataaaacttcgccaactcaacaaacttggcagcatactcagtcacggacatatttcc 14958189  T
Q  445 ttgcttcagctcaaggaa 462  Q
    |||||||| |||||||||    
T  14958190 ttgcttcaactcaaggaa 14958207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 379 - 462
Target Start/End: Complemental strand, 11527008 - 11526925
Alignment:
Q  379 gtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||| || ||||| | |||||||||||||||||||||    
T  11527008 gtagtgcggataaaacttagccaactccacaaacttggcagcatactcagtcactgacatatttccttgcttcagctcaaggaa 11526925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 335 - 462
Target Start/End: Complemental strand, 11549800 - 11549673
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||| || || ||||||||||||||||||| ||  || |||||||||||||| ||||| || ||||||||||||||||||||||| || |    
T  11549800 ttctcgaacttgatacatttcgaaaactcagcagtctctgcagcataatgcggataaaacttcgccaactcaacaaacttggcagcatactcagtcacgg 11549701  T
Q  435 acatgtatccttgcttcagctcaaggaa 462  Q
    |||| | ||||| ||||| |||||||||    
T  11549700 acatatttcctttcttcaactcaaggaa 11549673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 335 - 464
Target Start/End: Original strand, 14335968 - 14336097
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||||| ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || || |    
T  14335968 ttctcgaacttgatgcatctcgagaactcagcattctctgcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacgg 14336067  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | |||||||||||||||||||||||    
T  14336068 acatatttccttgcttcagctcaaggaatt 14336097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 335 - 464
Target Start/End: Original strand, 18181314 - 18181443
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||| | ||| |||||||| || ||||||| ||  ||||| ||||||||||||||||| || ||||    
T  18181314 ttctcgaacttgatgcatctcgagaactcagcattctcagcagtatagtgcgggtagaactttgacagctccacgaacttggcagcatactctgtcacag 18181413  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | |||||||||||||||||||||||    
T  18181414 acatatttccttgcttcagctcaaggaatt 18181443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 335 - 464
Target Start/End: Complemental strand, 44788049 - 44787920
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||||| ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || || |    
T  44788049 ttctcgaacttgatgcatctcgagaactcagcattctctgcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacgg 44787950  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | |||||||||||||||||||||||    
T  44787949 acatatttccttgcttcagctcaaggaatt 44787920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 335 - 462
Target Start/End: Complemental strand, 15157755 - 15157628
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||||| ||| |||||||| || ||||||| |   ||||| ||||||||||||||||| || ||||    
T  15157755 ttctcgaacttgatgcatctcgagaactcagcattctctgcagtatagtgcgggtagaactttgacggctccacgaacttggcagcatactctgtcacag 15157656  T
Q  435 acatgtatccttgcttcagctcaaggaa 462  Q
    |||||| ||||||||||| |||||||||    
T  15157655 acatgtttccttgcttcaactcaaggaa 15157628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 392 - 462
Target Start/End: Complemental strand, 17703102 - 17703032
Alignment:
Q  392 aactttgccaattccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||||| ||||| ||||||||||||||||| || |||||||||| |||||||||||||||||||||    
T  17703102 aactttgccaactccacgaacttggcagcatactctgtcacagacatgtttccttgcttcagctcaaggaa 17703032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 335 - 464
Target Start/End: Original strand, 8711177 - 8711306
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||||| ||| ||||||||||| ||||| | ||  ||||| |||||| |||||||||| || || |    
T  8711177 ttctcgaacttgatgcatctcgagaactcagcattctctgcagtatagtgcggatagaacttagacagctccacgaacttgacagcatactctgtcacgg 8711276  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | |||||||||||||||||||||||    
T  8711277 acatatttccttgcttcagctcaaggaatt 8711306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 335 - 464
Target Start/End: Complemental strand, 18586869 - 18586740
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||| | ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || || |    
T  18586869 ttctcgaacttgatgcatctcgagaactcagcattctcagcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacgg 18586770  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | |||||||||||||||||||||||    
T  18586769 acatatttccttgcttcagctcaaggaatt 18586740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 303 - 459
Target Start/End: Original strand, 15628067 - 15628223
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||| | ||| || |||||||  || ||||||||||| ||||||||||| || |||||| ||||||| | ||||||||| ||||||||||| | ||     
T  15628067 caattgctcgcttaatctcagcacgcaagccattctcaaatttgatgcacttagagaactcaacagtctcagcagtgtagtgtggataaaacttagtcag 15628166  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaag 459  Q
     ||||||||| | ||||||||||| || || |||||||  || ||||||| ||||||    
T  15628167 ctccacaaacatagcagcatactcggtcaccgacatgtcaccctgcttcaactcaag 15628223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 11233914 - 11233784
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| |||||||||||  | || ||||||||| |||| | ||| |||||||| || ||||||| ||  ||||| ||||||||||||||||| || |    
T  11233914 ccattctcgaacttgatgcatctcgagaactcagcattctcagcagtatagtgcgggtagaactttgacagctccacgaacttggcagcatactctgtca 11233815  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||| | ||||||||| | |||||||||    
T  11233814 cagacatatttccttgcttgaactcaaggaa 11233784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 392 - 462
Target Start/End: Complemental strand, 16726088 - 16726018
Alignment:
Q  392 aactttgccaattccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||||| ||||| ||||||||||||||||| || |||||||||| ||||||||||| |||||||||    
T  16726088 aactttgccaactccacgaacttggcagcatactctgtcacagacatgtttccttgcttcatctcaaggaa 16726018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 332 - 435
Target Start/End: Complemental strand, 12203476 - 12203373
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    ||||| |||||||| ||||||||||| |||||||||||||  | ||| || || |||||||| ||||| |  ||||||||||| |||||||||||||| |    
T  12203476 ccattttcaaacttaatgcactttgagaactcagcagtcttagcagtataatgtggataaaattttgcaagctccacaaacttagcagcatactcagtta 12203377  T
Q  432 caga 435  Q
    ||||    
T  12203376 caga 12203373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 404 - 464
Target Start/End: Original strand, 10874093 - 10874153
Alignment:
Q  404 tccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaatt 464  Q
    ||||| ||||||||||||||||| || |||||||| | |||||||||||||||||||||||    
T  10874093 tccacgaacttggcagcatactctgtcacagacatatttccttgcttcagctcaaggaatt 10874153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 303 - 438
Target Start/End: Complemental strand, 12798209 - 12798074
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||| ||||||||||| ||||| |  |  |||||||||||||||||||| || || |||||||| ||||| | ||| || |  |||||||||||||| |     
T  12798209 caatagccctcttgatatcagctctcaggccattctcaaacttgatgcatttggagaactcagctgtctccgcagtataataaggataaaactttgcaag 12798110  T
Q  403 ttccacaaacttggcagcatactcagtaacagacat 438  Q
     || |||||||| || ||||||||||| ||||||||    
T  12798109 ctctacaaacttagctgcatactcagttacagacat 12798074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 462
Target Start/End: Original strand, 13689613 - 13689740
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||| | ||  |||||||| || ||||||| ||  ||||| ||||||||||||||||| || ||||    
T  13689613 ttctcgaacttgatgcatctcgagaactcagcattctcagcagcatagtgcgggtagaactttgacagctccacgaacttggcagcatactctgtcacag 13689712  T
Q  435 acatgtatccttgcttcagctcaaggaa 462  Q
    |||||| | ||| ||||| |||||||||    
T  13689713 acatgtttacttccttcaactcaaggaa 13689740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 303 - 440
Target Start/End: Complemental strand, 14260951 - 14260814
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||| ||||||||||| ||||| |  || | ||| |||||||| || || || || |||||||||||||| | ||| ||||| ||||| ||||| || |     
T  14260951 caatagccctcttgatatcagctctcaaactattttcaaactttatacatttggagaactcagcagtctccgcagtatagtgaggatagaacttagcgag 14260852  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgt 440  Q
    |||||||||| | ||||||||||| || ||||||||||    
T  14260851 ttccacaaacctcgcagcatactccgtcacagacatgt 14260814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 456
Target Start/End: Original strand, 15114762 - 15114886
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    ||||| || ||||| |||||||| || ||| |||||||||| |  ||||| || ||||||||||| || |  ||||||||| | ||||||||||| || |    
T  15114762 ccattttcgaactttatgcacttggagaacccagcagtctcagcggtgtaatgtggataaaacttagcaagctccacaaaccttgcagcatactccgtta 15114861  T
Q  432 cagacatgtatccttgcttcagctc 456  Q
    | ||||| ||||| |||||||||||    
T  15114862 ctgacatatatccctgcttcagctc 15114886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 438
Target Start/End: Complemental strand, 18050650 - 18050523
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| |  || |||||||||||||| |||||||| || || ||||| ||||| ||||  || || ||||| |||||||| |  |||||||    
T  18050650 ctcttgatgtcagctctcaagccattctcaaactttatgcacttggagaattcagctgtctccggagcataatggggatagaactttgcaagctccacaa 18050551  T
Q  411 acttggcagcatactcagtaacagacat 438  Q
    | || ||||||||||||  |||||||||    
T  18050550 attttgcagcatactcaacaacagacat 18050523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 311 - 456
Target Start/End: Original strand, 14145213 - 14145358
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| |  || |||||||||||||| || || || || || ||||| ||||| | ||| || || || || |||||||| | ||||||||    
T  14145213 ctcttgatgtcagctctcaagccattctcaaactttatacatttggagaattcagctgtctccgcagtatattgggggtataactttgcaagttccacaa 14145312  T
Q  411 acttggcagcatactcagtaacagacatgtatccttgcttcagctc 456  Q
    |||| ||||||||||||  ||||||||| |  || |||||||||||    
T  14145313 actttgcagcatactcaacaacagacatatcaccctgcttcagctc 14145358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 456
Target Start/End: Original strand, 13677018 - 13677142
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| |||||||| || || || |||||||| ||||| |  || ||||| || || |||||||| | |||||||||||| |||||||| || ||||    
T  13677018 ccattctctaacttgatacatttggagaactcagctgtctccgcggtatagtgggggtagaactttgcaagttccacaaacttagcagcatattctgtaa 13677117  T
Q  432 cagacatgtatccttgcttcagctc 456  Q
    | ||||| |  || |||||||||||    
T  13677118 ctgacatatcaccctgcttcagctc 13677142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 440
Target Start/End: Original strand, 19150584 - 19150692
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    ||||| |||||||| || || || || |||||||||||||| | ||| ||||| ||||| ||||| || | |||||||||| | ||||||||||  || |    
T  19150584 ccattttcaaactttatacatttggagaactcagcagtctccgcagtatagtgaggatagaacttagcgagttccacaaacctcgcagcatactttgtca 19150683  T
Q  432 cagacatgt 440  Q
    |||||||||    
T  19150684 cagacatgt 19150692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 440
Target Start/End: Original strand, 20749983 - 20750091
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    ||||| |||||||| || || || || |||||||||||||| | ||| ||||| ||||| ||||| || | |||||||||| | ||||||||||  || |    
T  20749983 ccattttcaaactttatacatttggagaactcagcagtctccgcagtatagtgaggatagaacttagcgagttccacaaacctcgcagcatactttgtca 20750082  T
Q  432 cagacatgt 440  Q
    |||||||||    
T  20750083 cagacatgt 20750091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 438
Target Start/End: Original strand, 13024916 - 13025023
Alignment:
Q  331 cccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagta 430  Q
    |||||| ||||||||||| ||||| || |||||||| ||||| | | |||| || || || ||||| || | |||||| ||||| |||||||| ||||||    
T  13024916 cccattttcaaacttgatacacttggagaactcagctgtctccgcactgtaatgggggtagaacttagcaagttccacgaacttagcagcataatcagta 13025015  T
Q  431 acagacat 438  Q
    || |||||    
T  13025016 acggacat 13025023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 438
Target Start/End: Original strand, 15810779 - 15810885
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||||||||| || ||||| || |||||||| ||||| | | |||| || || || ||||| || | |||||| ||||| |||||||| |||||||    
T  15810779 ccattctcaaacttaatacacttggagaactcagctgtctccgcactgtaatgggggtagaacttagcaagttccacgaacttagcagcataatcagtaa 15810878  T
Q  432 cagacat 438  Q
    | |||||    
T  15810879 cggacat 15810885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 438
Target Start/End: Complemental strand, 16947151 - 16947042
Alignment:
Q  329 aacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcag 428  Q
    ||||||||||| ||||| || ||||| || |||||||| ||||| | | |||| || || || ||||| |  | |||||| ||||| ||||||||||| |    
T  16947151 aacccattctcgaacttaatacacttggagaactcagctgtctccgcactgtaatgggggtagaacttagaaagttccacgaactttgcagcatactccg 16947052  T
Q  429 taacagacat 438  Q
    ||||||||||    
T  16947051 taacagacat 16947042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 162; Significance: 3e-86; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 303 - 464
Target Start/End: Complemental strand, 23104985 - 23104824
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23104985 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 23104886  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaatt 464  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23104885 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaatt 23104824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 303 - 464
Target Start/End: Original strand, 20321165 - 20321326
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||||||||||||||| ||||||| ||| || |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20321165 caattgccctcttgatctcagcacgtaaaccgttctcaaatttgatgcactttgaaaactcagcagtctcaggagtgtagtgcggataaaactttgccaa 20321264  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaatt 464  Q
    |||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||    
T  20321265 ttccacaaacttcgcagcatactcagtcacagacatgtttccttgcttcagctcaaggaatt 20321326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 303 - 464
Target Start/End: Complemental strand, 22742224 - 22742063
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||| |||| || ||||||||||||||||||||||||||    
T  22742224 caattgccctcttgatttcagcacgtaacccgttctcaaacttgaagcactttgaaaactcagcaatctcgggggtgtagtgcggataaaactttgccaa 22742125  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaatt 464  Q
    ||||||||||||||||||||||||||| || ||||||| |||||  ||||||||||||||||    
T  22742124 ttccacaaacttggcagcatactcagtcaccgacatgtttccttatttcagctcaaggaatt 22742063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 303 - 462
Target Start/End: Complemental strand, 22733032 - 22732873
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||| ||||| || |||||||  || || |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22733032 caattgctctcttaatctcagcacgcaaaccgttctcaaatttgatacactttgaaaactcagcagtctctggagtgtagtgcggataaaacttttccaa 22732933  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||    
T  22732932 ttccacaaacttggcagcatactcagtcacggacatgtttccttgcttcagctcaaggaa 22732873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 303 - 464
Target Start/End: Complemental strand, 23039835 - 23039670
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||||||| || |||||||  || || |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23039835 caattgccctcttaatctcagcacacaaaccgttctcaaatttgattcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 23039736  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgt----atccttgcttcagctcaaggaatt 464  Q
    |||||||||||||||  |||||||||| || |||||||     |||||||||||||||||||||||    
T  23039735 ttccacaaacttggctacatactcagtcactgacatgtttaattccttgcttcagctcaaggaatt 23039670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 303 - 462
Target Start/End: Complemental strand, 21320261 - 21320102
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||||||| || ||||  |  || |||||||| ||||||||||||||||| |||||||||||||||   || || ||||||||||||||||||||    
T  21320261 caattgccctctttatatcaggccgcaaaccattctcgaacttgatgcactttgagaactcagcagtctctactgtataatgcggataaaactttgccaa 21320162  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     || ||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||    
T  21320161 ctcaacaaacttggcagcatactcagttacatacatgtttccttgcttcagctcaaggaa 21320102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 303 - 462
Target Start/End: Complemental strand, 23028720 - 23028561
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||||||| || ||||| |  || |||||||| |||||||| |||||  |||||||||||||||||| || ||| ||||||||||||||||||||    
T  23028720 caattgccctctttatatcagcccgcaatccattctcgaacttgatacacttcaaaaactcagcagtctctgcagcgtaatgcggataaaactttgccaa 23028621  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     || ||||||||||||||||||||||| || ||||||| ||||||||||||||| |||||    
T  23028620 ctctacaaacttggcagcatactcagttacggacatgtttccttgcttcagctcgaggaa 23028561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 23029946 - 23030105
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||| ||||| ||||| ||||| |  || |||||||| |||||||| ||||| ||||||||||||||||||  ||| || |||||||||||||| |||||    
T  23029946 caatcgcccttttgatctcagcccgcaatccattctcgaacttgatacacttcgaaaactcagcagtctctacagtataatgcggataaaacttagccaa 23030045  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||||||||| ||||||||||| || ||||||| |||||||||||||||||||||    
T  23030046 ttccacaaacttggcggcatactcagtcacggacatgtttccttgcttcagctcaaggaa 23030105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 335 - 462
Target Start/End: Original strand, 23065592 - 23065719
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| || ||||| ||||| |||||||||| |||||||| |||||| || ||||||||||||||||||||||||||||||||||||| |||||| || |    
T  23065592 ttctcgaatttgatacacttcgaaaactcagtagtctctgcagtgtaatgtggataaaactttgccaattccacaaacttggcagcatgctcagtcacgg 23065691  T
Q  435 acatgtatccttgcttcagctcaaggaa 462  Q
    |||||| |||||||||||||||||||||    
T  23065692 acatgtttccttgcttcagctcaaggaa 23065719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 335 - 462
Target Start/End: Original strand, 23075042 - 23075169
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| || ||||| ||||| |||||||||| |||||||| |||||| || ||||||||||||||||||||||||||||||||||||| |||||| || |    
T  23075042 ttctcgaatttgatacacttcgaaaactcagtagtctctgcagtgtaatgtggataaaactttgccaattccacaaacttggcagcatgctcagtcacgg 23075141  T
Q  435 acatgtatccttgcttcagctcaaggaa 462  Q
    |||||| |||||||||||||||||||||    
T  23075142 acatgtttccttgcttcagctcaaggaa 23075169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 303 - 464
Target Start/End: Original strand, 24678672 - 24678833
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||||||||||||||| ||||| |  || |||||||| ||||| || ||||| ||||||||||||||||||| || |||    ||||| |||||||||||    
T  24678672 caattgccctcttgatatcagcccgcaatccattctcgaacttaatacacttcgaaaactcagcagtctctgcagcgtaacttggatagaactttgccaa 24678771  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaatt 464  Q
     || ||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||    
T  24678772 ctctacaaacttggcagcatactcagttacggacatgtttccttgcttcagctcaaggaatt 24678833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 24704711 - 24704581
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||| ||||||||||||| ||||| |||||||||||||| | ||| || || ||||||||||| |||||||| |||||||||||||||||||| || |    
T  24704711 ccattcacaaacttgatgcattttgagaactcagcagtctcagcagtataatgtggataaaacttggccaattcaacaaacttggcagcatactcggtca 24704612  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||| ||||||||||| |||||||||    
T  24704611 cagacatgtttccttgcttcaactcaaggaa 24704581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 22462710 - 22462580
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| ||||||||||| || || |||||||||||||| | ||  || |||||||| |||||| |||| ||||| ||||||||||||||||| || |    
T  22462710 ccattctcgaacttgatgcatttcgagaactcagcagtctcagcagcataatgcggatagaactttaccaactccacgaacttggcagcatactctgtca 22462611  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||| |||||||||||||||||||||    
T  22462610 cagacatgtttccttgcttcagctcaaggaa 22462580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 332 - 464
Target Start/End: Complemental strand, 24873982 - 24873850
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| |||||||| ||  | || ||||||||| |||| ||||| |||||||| |||||||| ||||| || ||||||||||||||||||||||| |    
T  24873982 ccattctcgaacttgatacatctcgagaactcagcattctcaggagtatagtgcgggtaaaacttcgccaactcaacaaacttggcagcatactcagtca 24873883  T
Q  432 cagacatgtatccttgcttcagctcaaggaatt 464  Q
    ||||||||| ||| |||||||||||||| ||||    
T  24873882 cagacatgtttccctgcttcagctcaagcaatt 24873850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 332 - 459
Target Start/End: Complemental strand, 24656887 - 24656760
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| ||||||||||| || || |||||||||||||| | ||| || || ||||| ||||||||||| ||||| ||||||||||||||||| || |    
T  24656887 ccattctcgaacttgatgcatttcgagaactcagcagtctcagcagtataatgtggatagaactttgccaactccacgaacttggcagcatactcggtca 24656788  T
Q  432 cagacatgtatccttgcttcagctcaag 459  Q
    ||||||||| ||||||||| ||||||||    
T  24656787 cagacatgtttccttgctttagctcaag 24656760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 332 - 464
Target Start/End: Complemental strand, 23116288 - 23116156
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| ||||||||||| ||||| ||||||||| |||  | ||| ||||| || || ||||||||||  ||||| ||||||||||||||||| || |    
T  23116288 ccattctcgaacttgatgcattttgagaactcagcattctgagcagtatagtgtgggtagaactttgccatctccacgaacttggcagcatactctgtca 23116189  T
Q  432 cagacatgtatccttgcttcagctcaaggaatt 464  Q
    ||| ||||| |||||||||||||||||||||||    
T  23116188 cagtcatgtttccttgcttcagctcaaggaatt 23116156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 335 - 464
Target Start/End: Original strand, 27374483 - 27374612
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||||| ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || || |    
T  27374483 ttctcgaacttgatgcatctcgagaactcagcattctctgcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacgg 27374582  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||||| |||||||||||||||||||||||    
T  27374583 acatgtttccttgcttcagctcaaggaatt 27374612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 335 - 464
Target Start/End: Original strand, 9338796 - 9338925
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||||| ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || || |    
T  9338796 ttctcgaacttgatgcatctcgagaactcagcattctctgcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacgg 9338895  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | |||||||||||||||||||||||    
T  9338896 acatatttccttgcttcagctcaaggaatt 9338925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 335 - 464
Target Start/End: Original strand, 9487430 - 9487559
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||||| ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || || |    
T  9487430 ttctcgaacttgatgcatctcgagaactcagcattctctgcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacgg 9487529  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | |||||||||||||||||||||||    
T  9487530 acatatttccttgcttcagctcaaggaatt 9487559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 335 - 464
Target Start/End: Original strand, 16931721 - 16931850
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||||| ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || || |    
T  16931721 ttctcgaacttgatgcatctcgagaactcagcattctctgcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacgg 16931820  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | |||||||||||||||||||||||    
T  16931821 acatatttccttgcttcagctcaaggaatt 16931850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 335 - 464
Target Start/End: Original strand, 16984454 - 16984583
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||||| ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || || |    
T  16984454 ttctcgaacttgatgcatctcgagaactcagcattctctgcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacgg 16984553  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | |||||||||||||||||||||||    
T  16984554 acatatttccttgcttcagctcaaggaatt 16984583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 335 - 464
Target Start/End: Original strand, 17002214 - 17002343
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||||| ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || || |    
T  17002214 ttctcgaacttgatgcatctcgagaactcagcattctctgcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacgg 17002313  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | |||||||||||||||||||||||    
T  17002314 acatatttccttgcttcagctcaaggaatt 17002343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 335 - 462
Target Start/End: Original strand, 24265584 - 24265711
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||| | ||| |||| ||| || ||||||| ||  ||||| ||||||||||||||||| || ||||    
T  24265584 ttctcgaacttgatgcatctcgagaactcagcattctcagcagtatagtacgggtagaactttgacagctccacgaacttggcagcatactctgtcacag 24265683  T
Q  435 acatgtatccttgcttcagctcaaggaa 462  Q
    |||||| ||||||||||| |||||||||    
T  24265684 acatgtttccttgcttcaactcaaggaa 24265711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 332 - 429
Target Start/End: Complemental strand, 24817069 - 24816971
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcgga-taaaactttgccaattccacaaacttggcagcatactcagt 429  Q
    ||||||||||||||||||||||| || |||| ||||||||| | ||||||||| ||| |||||||| ||||  ||||||||||| |||||||| |||||    
T  24817069 ccattctcaaacttgatgcacttggagaacttagcagtctcagtagtgtagtgaggattaaaacttagccagctccacaaactttgcagcatattcagt 24816971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 359 - 464
Target Start/End: Original strand, 10872088 - 10872193
Alignment:
Q  359 aactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaa 458  Q
    ||||||||| |||| | ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || || ||||| | |||||||||||||||||    
T  10872088 aactcagcattctcagcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacggacatatttccttgcttcagctcaa 10872187  T
Q  459 ggaatt 464  Q
    ||||||    
T  10872188 ggaatt 10872193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 332 - 438
Target Start/End: Original strand, 28351089 - 28351195
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||||||||| |||||||| || |||||||||||||| | |||||| || |||||||| || || |  ||||||||| | |||||||||||||| |    
T  28351089 ccattctcaaacttaatgcacttggagaactcagcagtctcggcagtgtaatgtggataaaatttagcaagctccacaaaccttgcagcatactcagtta 28351188  T
Q  432 cagacat 438  Q
    | |||||    
T  28351189 ctgacat 28351195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 335 - 464
Target Start/End: Complemental strand, 22322571 - 22322442
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||| | ||| |||||||| || ||||| | ||  ||||| ||||||||||||||||| || || |    
T  22322571 ttctcgaacttgatgcatctcgagaactcagcattctcagcagtatagtgcgggtagaacttagacagctccacgaacttggcagcatactctgtcacgg 22322472  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | ||||||||| |||||||||||||    
T  22322471 acatatttccttgctttagctcaaggaatt 22322442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 462
Target Start/End: Original strand, 24713248 - 24713375
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||| | ||| |||||||| || ||||| | ||  ||||  ||||||||| ||||||| || ||||    
T  24713248 ttctcgaacttgatgcatctcgagaactcagcattctcagcagtatagtgcgggtagaacttcgacagctccatgaacttggcaacatactctgtcacag 24713347  T
Q  435 acatgtatccttgcttcagctcaaggaa 462  Q
    |||||| ||||||||||| |||||||||    
T  24713348 acatgtttccttgcttcaactcaaggaa 24713375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 462
Target Start/End: Complemental strand, 44382775 - 44382672
Alignment:
Q  359 aactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaa 458  Q
    ||||||||| |||| | ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || || ||||| | |||||| ||||||||||    
T  44382775 aactcagcattctcagcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacggacatatttccttgtttcagctcaa 44382676  T
Q  459 ggaa 462  Q
    ||||    
T  44382675 ggaa 44382672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 380 - 462
Target Start/End: Original strand, 45534768 - 45534850
Alignment:
Q  380 tagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||||||||||||| ||| || |||||||| ||||||||||| || || ||||| |  |||||||||||||| |||||    
T  45534768 tagtgcggataaaactttgtcaactcaacaaacttagcagcatactccgttactgacatatcgccttgcttcagctccaggaa 45534850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 303 - 456
Target Start/End: Original strand, 19818006 - 19818159
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||| | ||| || |||||||  || |||||||| || ||||| || || || || |||||||||||   | | ||||| |||||||||||||||||    
T  19818006 caattgctcgcttaatctcagcacgcaagccattctcgaatttgatacaattagagaattcagcagtctcaacattatagtgtggataaaactttgccaa 19818105  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctc 456  Q
     || |||||||| ||||||||||| || || ||||| |  ||||||||||||||    
T  19818106 ctcaacaaacttagcagcatactccgtcactgacatatcaccttgcttcagctc 19818159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 438
Target Start/End: Original strand, 12577546 - 12577673
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| |  || |||||||||||||| |||||||| || || ||||| ||||| ||||  || || ||||| |||||||| |  |||||||    
T  12577546 ctcttgatgtcagctctcaagccattctcaaactttatgcacttggagaattcagctgtctccggagcataatggggatagaactttgcaagctccacaa 12577645  T
Q  411 acttggcagcatactcagtaacagacat 438  Q
    | || ||||||||||||  |||||||||    
T  12577646 attttgcagcatactcaacaacagacat 12577673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 331 - 440
Target Start/End: Original strand, 20848799 - 20848908
Alignment:
Q  331 cccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagta 430  Q
    |||||||||||||||||||||||| || |||||||| ||||| | | | || || ||||| ||  | || |  ||||||||||| ||||||||||| ||     
T  20848799 cccattctcaaacttgatgcacttggagaactcagctgtctccgcactataatgaggatagaatgtggcaagctccacaaactttgcagcatactctgtg 20848898  T
Q  431 acagacatgt 440  Q
    ||||||||||    
T  20848899 acagacatgt 20848908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 23097217 - 23097115
Alignment:
Q  362 tcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaagga 461  Q
    ||||| ||||| | ||| ||||| || || ||||| ||||||||||| ||||| |||||||| || || ||||||||||  || ||||||| ||| ||||    
T  23097217 tcagctgtctccgcagtatagtgagggtagaacttagccaattccacgaactttgcagcatattccgtgacagacatgtcaccctgcttcaactccagga 23097118  T
Q  462 att 464  Q
    |||    
T  23097117 att 23097115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 426
Target Start/End: Complemental strand, 30208102 - 30208056
Alignment:
Q  380 tagtgcggataaaactttgccaattccacaaacttggcagcatactc 426  Q
    ||||||||||||||||||| ||| || |||||||| |||||||||||    
T  30208102 tagtgcggataaaactttgtcaactcaacaaacttagcagcatactc 30208056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 440
Target Start/End: Complemental strand, 19716267 - 19716138
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| |  ||||||||||| ||||| || ||||| || || ||||| ||||| | | |||| || || || ||||| || | |||||| |    
T  19716267 ctcttgatatcagccctcaacccattctcgaacttaatacacttggagaattcagctgtctccgcactgtaatgggggtagaacttagcaagttccacga 19716168  T
Q  411 acttggcagcatactcagtaacagacatgt 440  Q
    |||| ||||||||||| || ||||||||||    
T  19716167 actttgcagcatactctgtgacagacatgt 19716138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 440
Target Start/End: Complemental strand, 19720830 - 19720701
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| |  ||||||||||| ||||| || ||||| || || ||||| ||||| | | |||| || || || ||||| || | |||||| |    
T  19720830 ctcttgatatcagccctcaacccattctcgaacttaatacacttggagaattcagctgtctccgcactgtaatgggggtagaacttagcaagttccacga 19720731  T
Q  411 acttggcagcatactcagtaacagacatgt 440  Q
    |||| ||||||||||| || ||||||||||    
T  19720730 actttgcagcatactctgtgacagacatgt 19720701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 456
Target Start/End: Original strand, 23274778 - 23274931
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||| ||||||||||| ||||| |  |  |||||||||||||| || || || || |||||| ||||||| | ||| || || || |  ||||| || |     
T  23274778 caatagccctcttgatatcagctctcaggccattctcaaacttaatacatttggagaactcaacagtctccgcagtataatgagggtggaacttagcaag 23274877  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctc 456  Q
    |||||||||||| ||||||||||| ||||| ||||| |  || |||||||||||    
T  23274878 ttccacaaacttcgcagcatactctgtaactgacatatcaccctgcttcagctc 23274931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 128; Significance: 5e-66; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 19868036 - 19868195
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||    
T  19868036 caattgccctcttgatctcagcacgtaacccgttctcaaacttgatgcactttgaaaactcagcagtctcgggggtgtagtgcggataaaacttcgccaa 19868135  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  19868136 ttccacaaacttggcagcatactcagtcacagacatgtttccttgcttcagctcaaggaa 19868195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 304 - 462
Target Start/End: Original strand, 22437288 - 22437446
Alignment:
Q  304 aattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaat 403  Q
    |||||||||||| || ||||||| |||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  22437288 aattgccctcttaatctcagcacgtaacccgttctcaaacttgatgcactttgaaaactcagcagtctcgggggtgtagtgcggataaaactttgccaat 22437387  T
Q  404 tccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    |||||||||||||||||||||||||| |  ||||||| |||||| ||||||||||||||    
T  22437388 tccacaaacttggcagcatactcagtcatggacatgtttccttgtttcagctcaaggaa 22437446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 303 - 464
Target Start/End: Original strand, 23081841 - 23082002
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||| |||||| |||||||  || |||||||  || || || ||||| |||||||||| |||||| | ||||||||||||||||||||| |||||    
T  23081841 caattgcccgcttgatctcagcacgcaaaccattctagaatttaatacacttagaaaactcagtagtctcagcagtgtagtgcggataaaacttagccaa 23081940  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaatt 464  Q
    ||||||||| ||||||||||||||||| || ||||| | |||||||||||||||||||||||    
T  23081941 ttccacaaatttggcagcatactcagtcactgacatatttccttgcttcagctcaaggaatt 23082002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 21765230 - 21765389
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||||||| || ||||  |  || |||||||| ||||| ||||||||||| |||||| ||||||||  || ||||||||||||||||||||||||    
T  21765230 caattgccctctttatatcaggccgcaaaccattctcgaactttatgcactttgagaactcaacagtctctacagcgtagtgcggataaaactttgccaa 21765329  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     || ||||||||||||||||||||||| || ||||| | |||||||||||||||||||||    
T  21765330 ctctacaaacttggcagcatactcagtcacggacatttttccttgcttcagctcaaggaa 21765389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 335 - 462
Target Start/End: Complemental strand, 18404767 - 18404640
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    |||||||| ||||| |||||  |||||||||||||||||| |||||| |  || |||||||||||||| |||||||||||||||||||||||||| ||||    
T  18404767 ttctcaaatttgatacacttcaaaaactcagcagtctctgcagtgtaatctgggtaaaactttgccaactccacaaacttggcagcatactcagtcacag 18404668  T
Q  435 acatgtatccttgcttcagctcaaggaa 462  Q
    |||||| ||| |||||||||||||||||    
T  18404667 acatgtttccatgcttcagctcaaggaa 18404640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 303 - 462
Target Start/End: Complemental strand, 18182250 - 18182091
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||||||||||||||| |||||||  || ||||||||||| ||||||||||| |  |||||||||| ||| | ||| || || |||||||| || ||||     
T  18182250 caattgccctcttgatatcagcacgcaaaccattctcaaatttgatgcacttggggaactcagcagactcagcagtataatgtggataaaatttagccag 18182151  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     ||||||||||| |||||||||||||| || |||||||  ||||||||||||||||||||    
T  18182150 ctccacaaacttagcagcatactcagtcaccgacatgttcccttgcttcagctcaaggaa 18182091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 25756449 - 25756319
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| ||||||||||| ||||| |||||||||||||| |  |||||||| ||||| ||||||||||| ||||| |||||||||||||||||  | |    
T  25756449 ccattctcgaacttgatgcattttgagaactcagcagtctcagcggtgtagtgtggatagaactttgccaactccacgaacttggcagcatactcgatca 25756350  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
     |||||||| ||||||||| |||||||||||    
T  25756349 tagacatgtttccttgctttagctcaaggaa 25756319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 27558803 - 27558673
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||||||||||||||| || || |||||||||||||| | ||| || || || || ||||||||||| ||||| ||||||||||||||||| || |    
T  27558803 ccattctcaaacttgatgcatttcgagaactcagcagtctcagcagtataatgtgggtagaactttgccaactccacgaacttggcagcatactcggtca 27558704  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||| ||||||||| |||||||||||    
T  27558703 cagacatgtttccttgctttagctcaaggaa 27558673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 332 - 464
Target Start/End: Complemental strand, 22829223 - 22829091
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| |||||||||||  | ||  | |||||| |||| | ||| |||||||| |||||||| ||||| || ||||||||||||||||||||||| |    
T  22829223 ccattctcgaacttgatgcatctcgagtaatcagcattctcagcagtatagtgcgggtaaaacttcgccaactcaacaaacttggcagcatactcagtca 22829124  T
Q  432 cagacatgtatccttgcttcagctcaaggaatt 464  Q
    ||||||||| |||||||||||||||||||||||    
T  22829123 cagacatgtttccttgcttcagctcaaggaatt 22829091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 5836065 - 5835935
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| |||||||| || ||||||||||| |||||||| | ||  || ||||| |||||||||||||| || ||||||||||||||||||||||| |    
T  5836065 ccattctcgaacttgatacattttgaaaactcggcagtctcagcagcataatgcgggtaaaactttgccaactcaacaaacttggcagcatactcagtca 5835966  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    |  |||| | |||||||||||||||||||||    
T  5835965 cgaacatatttccttgcttcagctcaaggaa 5835935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 309 - 455
Target Start/End: Original strand, 18660343 - 18660489
Alignment:
Q  309 ccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccac 408  Q
    |||||||||| |||||||  || ||||||||||| |||||| |||| || |||||||||||||| | ||||||||||||||||||||| ||||  || ||    
T  18660343 ccctcttgatctcagcacgcaagccattctcaaatttgatgtacttggagaactcagcagtctcagcagtgtagtgcggataaaacttagccagctctac 18660442  T
Q  409 aaacttggcagcatactcagtaacagacatgtatccttgcttcagct 455  Q
    |||||| || |||||||| || || |||||||  || ||||||||||    
T  18660443 aaactttgccgcatactcggtcactgacatgtcaccctgcttcagct 18660489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 332 - 464
Target Start/End: Original strand, 25115999 - 25116131
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| |||||||| ||  | || ||||||||| |||| | ||| |||||||| || ||||| ||||| || |||||||||||| ||||||| || |    
T  25115999 ccattctcgaacttgatacatctcgagaactcagcattctcagcagtatagtgcgggtagaacttcgccaactcaacaaacttggcatcatactctgtca 25116098  T
Q  432 cagacatgtatccttgcttcagctcaaggaatt 464  Q
    ||||||||| |||||||||||||||||||||||    
T  25116099 cagacatgtttccttgcttcagctcaaggaatt 25116131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 303 - 454
Target Start/End: Original strand, 18326275 - 18326426
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||| | ||| || |||||||  || ||||||||||||||||||||||| |||||  ||||||||||   | |||||||||||||||||||| ||||    
T  18326275 caattgctcgcttaatctcagcacgcaagccattctcaaacttgatgcacttcgaaaatgcagcagtctcattattgtagtgcggataaaactttaccaa 18326374  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagc 454  Q
     ||||||||||| |||| |||||| || || ||||| |  ||||||||||||    
T  18326375 ctccacaaacttagcagtatactctgtcactgacatatcaccttgcttcagc 18326426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 335 - 464
Target Start/End: Complemental strand, 29589273 - 29589144
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||||| ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || || |    
T  29589273 ttctcgaacttgatgcatctcgagaactcagcattctctgcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacgg 29589174  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | |||||||||||||||||||||||    
T  29589173 acatatttccttgcttcagctcaaggaatt 29589144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 2871639 - 2871509
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| |||||||||||  | || ||||||||| |||| | ||| |||||||| || ||||| | ||  ||||| ||||||||||||||||| || |    
T  2871639 ccattctcgaacttgatgcatctcgagaactcagcattctcagcagtatagtgcgggtagaacttcgacagctccacgaacttggcagcatactctgtca 2871540  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||| ||||||||||| |||||||||    
T  2871539 cagacatgtttccttgcttcaactcaaggaa 2871509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 376 - 462
Target Start/End: Original strand, 19666937 - 19667023
Alignment:
Q  376 agtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    |||||| |||||||||||||||||||| || ||||| |||||||||||||| || || ||||||| |||||| ||||||||||||||    
T  19666937 agtgtattgcggataaaactttgccaactctacaaatttggcagcatactctgtcactgacatgtttccttgtttcagctcaaggaa 19667023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 303 - 424
Target Start/End: Complemental strand, 25958616 - 25958495
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||| |||| |||||| || ||||  || |||||||| |||||||||||||| || |||| |||||||||   |||||| |||||||||||||| |||||    
T  25958616 caatggcccccttgatatcggcacgcaaaccattctcgaacttgatgcacttggagaacttagcagtctcaacagtgtaatgcggataaaacttagccaa 25958517  T
Q  403 ttccacaaacttggcagcatac 424  Q
     ||||||||||| |||||||||    
T  25958516 ctccacaaacttcgcagcatac 25958495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 359 - 462
Target Start/End: Complemental strand, 28260007 - 28259904
Alignment:
Q  359 aactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaa 458  Q
    ||||||| | |||| | ||| |||||||| |||||||||| ||  ||||||||||||||||||||||| || ||||||||||  |||||||||| |||||    
T  28260007 aactcagaattctcagcagtatagtgcgggtaaaactttgacagctccacaaacttggcagcatactctgtcacagacatgttcccttgcttcaactcaa 28259908  T
Q  459 ggaa 462  Q
    ||||    
T  28259907 ggaa 28259904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 359 - 462
Target Start/End: Original strand, 28285909 - 28286012
Alignment:
Q  359 aactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaa 458  Q
    ||||||| | |||| | ||| |||||||| |||||||||| ||  ||||||||||||||||||||||| || ||||||||||  |||||||||| |||||    
T  28285909 aactcagaattctcagcagtatagtgcgggtaaaactttgacagctccacaaacttggcagcatactctgtcacagacatgttcccttgcttcaactcaa 28286008  T
Q  459 ggaa 462  Q
    ||||    
T  28286009 ggaa 28286012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 359 - 462
Target Start/End: Complemental strand, 28338756 - 28338653
Alignment:
Q  359 aactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaa 458  Q
    ||||||| | |||| | ||| |||||||| |||||||||| ||  ||||||||||||||||||||||| || ||||||||||  |||||||||| |||||    
T  28338756 aactcagaattctcagcagtatagtgcgggtaaaactttgacagctccacaaacttggcagcatactctgtcacagacatgttcccttgcttcaactcaa 28338657  T
Q  459 ggaa 462  Q
    ||||    
T  28338656 ggaa 28338653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 335 - 464
Target Start/End: Original strand, 16575337 - 16575466
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||||| ||| ||||||||||| ||||| | ||  ||||  ||||||||||||||||| || || |    
T  16575337 ttctcgaacttgatgcatctcgagaactcagcattctctgcagtatagtgcggatagaacttagacagctccatgaacttggcagcatactccgtcacgg 16575436  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | |||||||||||||||| ||||||    
T  16575437 acatatttccttgcttcagctcatggaatt 16575466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 335 - 464
Target Start/End: Complemental strand, 16620043 - 16619914
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||||| ||| ||||||||||| ||||| | ||  ||||  ||||||||||||||||| || || |    
T  16620043 ttctcgaacttgatgcatctcgagaactcagcattctctgcagtatagtgcggatagaacttagacagctccatgaacttggcagcatactccgtcacgg 16619944  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | |||||||||||||||| ||||||    
T  16619943 acatatttccttgcttcagctcatggaatt 16619914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 311 - 456
Target Start/End: Original strand, 19456449 - 19456594
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| |  || ||||||||||||||||| ||||| || |||||||| ||||| |  || ||||| || || ||||| || | ||||||||    
T  19456449 ctcttgatatcagccctcaaaccattctcaaacttgatacacttggagaactcagctgtctccgcggtatagtgggggtagaacttagcaagttccacaa 19456548  T
Q  411 acttggcagcatactcagtaacagacatgtatccttgcttcagctc 456  Q
    |||| ||||||||||| ||||||||||| |  || |||||||||||    
T  19456549 actttgcagcatactctgtaacagacatatccccctgcttcagctc 19456594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 311 - 456
Target Start/End: Original strand, 19466594 - 19466739
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| |  || ||||||||||||||||| ||||| || |||||||| ||||| |  || ||||| || || ||||| || | ||||||||    
T  19466594 ctcttgatatcagccctcaaaccattctcaaacttgatacacttggagaactcagctgtctccgcggtatagtgggggtagaacttagcaagttccacaa 19466693  T
Q  411 acttggcagcatactcagtaacagacatgtatccttgcttcagctc 456  Q
    |||| ||||||||||| ||||||||||| |  || |||||||||||    
T  19466694 actttgcagcatactctgtaacagacatatccccctgcttcagctc 19466739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 335 - 462
Target Start/End: Complemental strand, 24292616 - 24292489
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||| | ||| |||||||| || ||||| | ||  ||||| ||||||||||||||||| || ||||    
T  24292616 ttctcgaacttgatgcatctcgagaactcagcattctcagcagtatagtgcgggtagaacttcgacagctccacgaacttggcagcatactctgtcacag 24292517  T
Q  435 acatgtatccttgcttcagctcaaggaa 462  Q
    |||||| |||||||||||  ||||||||    
T  24292516 acatgtttccttgcttcaattcaaggaa 24292489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 359 - 462
Target Start/End: Original strand, 28313101 - 28313204
Alignment:
Q  359 aactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaa 458  Q
    ||||||| | |||||| ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || || ||||||| ||||||||||| |||||    
T  28313101 aactcagaattctctgcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacggacatgtttccttgcttcaactcaa 28313200  T
Q  459 ggaa 462  Q
    ||||    
T  28313201 ggaa 28313204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 333 - 459
Target Start/End: Complemental strand, 23084658 - 23084532
Alignment:
Q  333 cattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaac 432  Q
    |||||||||||||||||||||| || |||||||||||||| | |||| |||  |||||||||||  | |  |||||||||||  ||||||||||||| ||    
T  23084658 cattctcaaacttgatgcacttggagaactcagcagtctcagcagtgcagtatggataaaacttaactagctccacaaactttccagcatactcagtcac 23084559  T
Q  433 agacatgtatccttgcttcagctcaag 459  Q
     ||| | |  || ||||||||||||||    
T  23084558 tgacttatcaccctgcttcagctcaag 23084532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 335 - 464
Target Start/End: Original strand, 27206069 - 27206198
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||| ||  |||| ||||||| | |||| | ||| |||||||| || ||||| | ||  ||||||||||||||||||||||| || || |    
T  27206069 ttctcgaacttgatacatcttgagaactcagaattctcagcagtatagtgcgggtagaacttcgacagctccacaaacttggcagcatactctgtcacgg 27206168  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | ||||||||||| |||||||||||    
T  27206169 acatatttccttgcttcaactcaaggaatt 27206198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 335 - 464
Target Start/End: Complemental strand, 27243159 - 27243030
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||| ||  |||| ||||||| | |||| | ||| |||||||| || ||||| | ||  ||||||||||||||||||||||| || || |    
T  27243159 ttctcgaacttgatacatcttgagaactcagaattctcagcagtatagtgcgggtagaacttcgacagctccacaaacttggcagcatactctgtcacgg 27243060  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | ||||||||||| |||||||||||    
T  27243059 acatatttccttgcttcaactcaaggaatt 27243030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 27558596 - 27558520
Alignment:
Q  386 ggataaaactttgccaattccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||| ||||||||||| ||||| ||| ||||||||||||| || ||| |||||| ||||||||| |||||||||||    
T  27558596 ggatagaactttgccaactccacgaacctggcagcatactcggtcacatacatgtttccttgctttagctcaaggaa 27558520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 376 - 440
Target Start/End: Complemental strand, 30677823 - 30677759
Alignment:
Q  376 agtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacagacatgt 440  Q
    ||||||||| ||||||||||| ||||||||||||||||| ||||||||||| || || |||||||    
T  30677823 agtgtagtgtggataaaacttagccaattccacaaacttagcagcatactcggtcaccgacatgt 30677759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 311 - 456
Target Start/End: Original strand, 19438428 - 19438573
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| |  || |||||||||||||| || || || || || ||||| || || | ||| || || || || |||||||| | ||||||||    
T  19438428 ctcttgatgtcagctctcaagccattctcaaactttatacatttggagaattcagctgtttccgtagtataatgggggtagaactttgcaagttccacaa 19438527  T
Q  411 acttggcagcatactcagtaacagacatgtatccttgcttcagctc 456  Q
    |||| ||||||||||| || ||||||||||  ||||||||||||||    
T  19438528 acttagcagcatactctgtgacagacatgtcaccttgcttcagctc 19438573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 303 - 440
Target Start/End: Complemental strand, 24515287 - 24515150
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||| ||||||||||| ||||| |  |  ||||||||||||||||| ||||| || |||||||| ||||| |  || ||||| || || ||||| || |     
T  24515287 caatagccctcttgatgtcagctctcagaccattctcaaacttgatacacttggagaactcagctgtctccgcggtatagtgggggtagaacttagcaag 24515188  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgt 440  Q
    ||||||||||||  |||||||||| || ||||||||||    
T  24515187 ttccacaaactttacagcatactctgtgacagacatgt 24515150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 455
Target Start/End: Original strand, 18798108 - 18798260
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||| ||||||||||| ||||| | ||  |||||||||||||| || || || || || ||||| ||||||| ||| || || || || ||||| || |     
T  18798108 caatagccctcttgatgtcagcccttaggccattctcaaactttatacatttggagaattcagctgtctctgcagtataatgagggtagaacttagcaag 18798207  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagct 455  Q
    |||||||||||| |||||||||||  | ||||||||||  || ||||||||||    
T  18798208 ttccacaaacttcgcagcatactctatgacagacatgtcaccctgcttcagct 18798260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 303 - 438
Target Start/End: Complemental strand, 8720568 - 8720433
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||| ||||| ||||| ||||| | ||| |||||||||||||| || ||||| || |||||||| ||||| | | | || || || || ||||| || |     
T  8720568 caatagcccttttgatatcagctcttaaaccattctcaaactttatacacttggagaactcagcggtctccgcactataatgagggtagaacttagcaag 8720469  T
Q  403 ttccacaaacttggcagcatactcagtaacagacat 438  Q
    |||||||||||| ||||||||||| ||||| |||||    
T  8720468 ttccacaaacttagcagcatactctgtaactgacat 8720433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 303 - 438
Target Start/End: Original strand, 16814058 - 16814193
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||| ||||||||||| ||||| | ||| |||||||||||||| || ||||| || |||||||| ||||| | | | || || || || ||||| || |     
T  16814058 caatagccctcttgatatcagctcttaaaccattctcaaactttatacacttggagaactcagctgtctccgcactataatgagggtagaacttagcaag 16814157  T
Q  403 ttccacaaacttggcagcatactcagtaacagacat 438  Q
    |||||||||||| |||||||| || ||||| |||||    
T  16814158 ttccacaaactttgcagcatattctgtaactgacat 16814193  T

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Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 332 - 393
Target Start/End: Complemental strand, 19486128 - 19486067
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaa 393  Q
    |||||||||||||| |||||||| || |||||||||||||| | |||||| || ||||||||    
T  19486128 ccattctcaaactttatgcacttggagaactcagcagtctcggcagtgtaatgtggataaaa 19486067  T

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Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 359 - 440
Target Start/End: Complemental strand, 20010308 - 20010227
Alignment:
Q  359 aactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacagacatgt 440  Q
    |||||||| ||||| | ||||||||| |||||||||||||| | ||||   ||||||||||||||||| || | ||||||||    
T  20010308 aactcagctgtctccgcagtgtagtgaggataaaactttgcaagttccgtgaacttggcagcatactctgtgagagacatgt 20010227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 440
Target Start/End: Complemental strand, 14376771 - 14376642
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| |  || |||||||||||||| || || || || || ||||| ||||| | ||| ||||| || || ||||| || | ||||||||    
T  14376771 ctcttgatgtcagctctcaagccattctcaaactttatacatttggagaattcagctgtctccgcagtatagtgagggtagaacttagcaagttccacaa 14376672  T
Q  411 acttggcagcatactcagtaacagacatgt 440  Q
    |||| ||||||||||| || ||| ||||||    
T  14376671 actttgcagcatactctgtgacaaacatgt 14376642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 372
Target Start/End: Original strand, 24367826 - 24367887
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctc 372  Q
    |||||||| ||||| |  |||||||||||||||||||| ||||| || |||||||| |||||    
T  24367826 ctcttgatgtcagccctcaacccattctcaaacttgatacacttggagaactcagctgtctc 24367887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 452
Target Start/End: Original strand, 25771262 - 25771411
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||| |||| ||| || |||||||  || ||||| |||||||||||||| ||||| || ||||||||||| | ||  ||||| || ||||| | ||| |     
T  25771262 caatagcccgcttaatatcagcacgcaaaccattttcaaacttgatgcattttgagaattcagcagtctcagcagaatagtgtgggtaaaattatgcaag 25771361  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttca 452  Q
     || |||||||| || ||||| ||||| |||||||| |  ||||||||||    
T  25771362 ctctacaaacttagctgcatattcagtcacagacatatccccttgcttca 25771411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 452
Target Start/End: Complemental strand, 34642448 - 34642299
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||| ||||||||||| ||||| |  | ||||||||| ||||| || || || || || ||||| ||||| | ||| ||||| ||||||||||| ||||     
T  34642448 caatggccctcttgatgtcagctctcagcccattctcgaacttaatacatttggagaattcagccgtctccgcagtatagtgaggataaaacttagccag 34642349  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttca 452  Q
     |||   ||||| |||||||| || || ||||||||||  ||||||||||    
T  34642348 ctccgtgaactttgcagcatattccgtgacagacatgtcaccttgcttca 34642299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 311 - 399
Target Start/End: Original strand, 15462762 - 15462850
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgc 399  Q
    |||||||| ||||| |  || ||||| |||||||| || || || || |||||||| ||||| | ||||||||| ||||||||||||||    
T  15462762 ctcttgatgtcagctctcaaaccattttcaaacttaatacatttggagaactcagccgtctccgcagtgtagtgaggataaaactttgc 15462850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 122; Significance: 2e-62; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 303 - 464
Target Start/End: Complemental strand, 10601 - 10440
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||||||| |||| || ||||||| |||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10601 caattgccatcttaatctcagcacgtaacccgttctcaaatttgatgcactttgaaaactcagaagtctctggagtgtagtgcggataaaactttgccaa 10502  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaatt 464  Q
    ||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||    
T  10501 ttccacaaacttggcagcatactcagtcacggacatgtttccttgcttcagctcaaggaatt 10440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 118; Significance: 5e-60; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 303 - 464
Target Start/End: Original strand, 8994 - 9155
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||||||| || ||||||| |||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  8994 caattgccctcttaatctcagcacgtaacccgttctcaaatttgatgcactttgaaaactcaggagtctctggagtgtagtgcggataaaacttttccaa 9093  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaatt 464  Q
    ||||||||||||||||||||||| ||| |||||||||| |||||||||||||| ||||||||    
T  9094 ttccacaaacttggcagcatacttagtcacagacatgtttccttgcttcagctaaaggaatt 9155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 115; Significance: 3e-58; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 303 - 461
Target Start/End: Complemental strand, 24447 - 24289
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||||||| || ||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24447 caattgccctcttaatctcagcacgtaacccgttctcaaatttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 24348  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaagga 461  Q
    |||||||||||| |||||||||||||| || |||| || | ||||||||||||||||||    
T  24347 ttccacaaacttagcagcatactcagtcacggacaagtttacttgcttcagctcaagga 24289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 323 - 464
Target Start/End: Complemental strand, 1333 - 1192
Alignment:
Q  323 gcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcat 422  Q
    |||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  1333 gcacgtaacccgttctcaaatttgatgcactttgaaaactcagcagtctctggagtgtagtgtggataaaactttgccaattccacaaacttggcagcat 1234  T
Q  423 actcagtaacagacatgtatccttgcttcagctcaaggaatt 464  Q
    ||||||| || ||||||| |||||||||||||||||||||||    
T  1233 actcagtcacggacatgtttccttgcttcagctcaaggaatt 1192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 114; Significance: 1e-57; HSPs: 2)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 303 - 464
Target Start/End: Original strand, 15494 - 15655
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||||||| || ||||||| |||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  15494 caattgccctcttaatctcagcacgtaacccgttctcaaatttgatgcactttgaaaactcaacagtctctggagtgtagtgcggataaaactttaccaa 15593  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaatt 464  Q
    ||||||||  ||||||||||||||||| || ||||||| |||||||||||||||||||||||    
T  15594 ttccacaagtttggcagcatactcagtcacggacatgtttccttgcttcagctcaaggaatt 15655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 234 - 310
Alignment:
Q  386 ggataaaactttgccaattccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||| ||||||||||| ||||| ||||||| |||||||||||| |||||||||| ||||||||| |||||||||||    
T  234 ggatagaactttgccaactccacgaacttggaagcatactcagtcacagacatgtttccttgctttagctcaaggaa 310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 113; Significance: 5e-57; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 303 - 463
Target Start/End: Complemental strand, 50066 - 49906
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||||||||||||||| ||||||| |||||| ||||||||||| || |||||||||||||||||||||||  | ||||||||||||||||||||||||||    
T  50066 caattgccctcttgatctcagcacgtaacccgttctcaaacttaatacactttgaaaactcagcagtctcgcgggtgtagtgcggataaaactttgccaa 49967  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaat 463  Q
     |||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||    
T  49966 ctccacaaacttggcagcatactcagtcactgacatgtttccttgcttcagctcaaggaat 49906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 112; Significance: 2e-56; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 303 - 462
Target Start/End: Complemental strand, 7378 - 7219
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||||||||||||||| ||||||| |||||| ||||| |||||||| ||||| |||||||||||||||||| ||||||| |||||||||||| |||||||    
T  7378 caattgccctcttgatctcagcacgtaacccgttctcgaacttgatacacttcgaaaactcagcagtctctagagtgtaatgcggataaaaccttgccaa 7279  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||    
T  7278 ttccacaaacttggcagcatactcagtcatagacatgtttccttgcttcagctcaaggaa 7219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 112; Significance: 2e-56; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 303 - 462
Target Start/End: Complemental strand, 34492 - 34334
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||||||||||||||| ||||||| |||| | |||||||||||||||||||||||||||||||||||||  || |||| |||||||||||||||||||||    
T  34492 caattgccctcttgatctcagcacgtaactcgttctcaaacttgatgcactttgaaaactcagcagtcttgggggtgt-gtgcggataaaactttgccaa 34394  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||    
T  34393 ttccacaaacttggcagcatactcagtcacatacatgtttccttgcttcagctcaaggaa 34334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 311 - 462
Target Start/End: Original strand, 42223 - 42374
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    ||||| || |||||||  || ||||||||||| |||||  |||||||||| ||||||||||||| | ||||||||||| |||||||| |||| |||||||    
T  42223 ctcttaatctcagcacgcaaaccattctcaaatttgataaactttgaaaattcagcagtctctgcaatgtagtgcggacaaaacttttccaactccacaa 42322  T
Q  411 acttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    |||||||||||||||| || || ||||||| ||||| |||||||||||||||    
T  42323 acttggcagcatactctgtcactgacatgtttcctttcttcagctcaaggaa 42374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 311 - 462
Target Start/End: Original strand, 75943 - 76094
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    ||||| || |||||||  || ||||||||||| |||||  |||||||||| ||||||||||||| | ||||||||||| |||||||| |||| |||||||    
T  75943 ctcttaatctcagcacgcaaaccattctcaaatttgataaactttgaaaattcagcagtctctgcaatgtagtgcggacaaaacttttccaactccacaa 76042  T
Q  411 acttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    |||||||||||||||| || || ||||||| ||||| |||||||||||||||    
T  76043 acttggcagcatactctgtcactgacatgtttcctttcttcagctcaaggaa 76094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 112; Significance: 2e-56; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 19981587 - 19981746
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||||||||||||||| |||| || |||||| ||||||||||||||||||||||| ||||||| |||||| | |||||| ||||||||||||||||||||    
T  19981587 caattgccctcttgatctcagtacgtaacccgttctcaaacttgatgcactttgagaactcagtagtctcagcagtgtaatgcggataaaactttgccaa 19981686  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  19981687 ctccacaaacttggcagcatactcagtcacagacatgtttccttgcttcagctcaaggaa 19981746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 303 - 462
Target Start/End: Complemental strand, 18880818 - 18880659
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||||||| || ||||| |  ||  |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18880818 caattgccctctttatctcagctcgcaaagcattctcaaatttgatacactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 18880719  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||||||||||||||||||||| |  ||||||| |||||||||||||||| ||||    
T  18880718 ttccacaaacttggcagcatactcagtcatggacatgtttccttgcttcagctcatggaa 18880659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 311 - 464
Target Start/End: Complemental strand, 21391014 - 21390861
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    ||||| || ||||||| |||||| |||||||||||||| |||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||    
T  21391014 ctcttaatctcagcacgtaacccgttctcaaacttgatacactttgaaaactcaaaagtctctggagtgtagtgcggatagaactttgccaattccacaa 21390915  T
Q  411 acttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaatt 464  Q
    |  |||||||||||||||| || ||||||| |||||||||||||||||||||||    
T  21390914 atatggcagcatactcagtcaccgacatgtttccttgcttcagctcaaggaatt 21390861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 311 - 464
Target Start/End: Complemental strand, 21780340 - 21780187
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    ||||| || ||||||| |||||| |||||||||||||| |||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||    
T  21780340 ctcttaatctcagcacgtaacccgttctcaaacttgatacactttgaaaactcaaaagtctctggagtgtagtgcggatagaactttgccaattccacaa 21780241  T
Q  411 acttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaatt 464  Q
    |  |||||||||||||||| || ||||||| |||||||||||||||||||||||    
T  21780240 atatggcagcatactcagtcaccgacatgtttccttgcttcagctcaaggaatt 21780187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 303 - 462
Target Start/End: Complemental strand, 21163691 - 21163532
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||||||| || ||||| |  || |||||||| |||||||| ||||| ||||||||| ||||||||| ||  || ||||||||||| ||||||||    
T  21163691 caattgccctcttcatctcagcccgcaatccattctcgaacttgatacacttcgaaaactcaacagtctctgcagcttaatgcggataaaaatttgccaa 21163592  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     |||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||    
T  21163591 ctccacaaacttggcagcatactcagtcacagacatgttttcttgcttcagctcaaggaa 21163532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 21672135 - 21672294
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||||||||||||||| ||||||| ||| || ||||| || |||||||| || ||||||||||||||||||| ||| || |||| |||||||||||||||    
T  21672135 caattgccctcttgatctcagcacgtaaaccgttctcgaatttgatgcatttcgaaaactcagcagtctctgcagtataatgcgaataaaactttgccaa 21672234  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     ||||||||||||||||||||||| || || |||||||  ||||| |||||||| |||||    
T  21672235 ctccacaaacttggcagcatactctgtcactgacatgttcccttgtttcagctctaggaa 21672294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 303 - 462
Target Start/End: Complemental strand, 22421054 - 22420895
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||| |||||| |||||||  || ||||| ||||| || || ||||| ||||| |||| ||||||   ||| ||||||||||||||||||| |||    
T  22421054 caattgcccgcttgatctcagcacgcaagccattgtcaaatttaatacacttagaaaattcagtagtctcgacagtatagtgcggataaaactttgtcaa 22420955  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     ||||||||||||| |||||||||||| || ||||||| |||||||||||||||||||||    
T  22420954 ctccacaaacttggtagcatactcagtcactgacatgtttccttgcttcagctcaaggaa 22420895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 332 - 464
Target Start/End: Original strand, 15537032 - 15537164
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| ||||||||||| || || |||||| ||||||| | ||  || | |||||| ||||||||||| ||||||||||||||||||||||| || |    
T  15537032 ccattctcgaacttgatgcatttcgagaactcaacagtctcagcagcataatacggatagaactttgccaactccacaaacttggcagcatactctgtca 15537131  T
Q  432 cagacatgtatccttgcttcagctcaaggaatt 464  Q
    ||||||||| |||||||||||||||||||||||    
T  15537132 cagacatgtttccttgcttcagctcaaggaatt 15537164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 332 - 464
Target Start/End: Complemental strand, 17830102 - 17829970
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| |||||||||||  | || ||||||||| |||| | ||| ||||| || || ||||||||||||||||| ||||||||||||||||| || |    
T  17830102 ccattctcgaacttgatgcatctcgagaactcagcattctcagcagtatagtgtgggtagaactttgccaattccacgaacttggcagcatactccgtca 17830003  T
Q  432 cagacatgtatccttgcttcagctcaaggaatt 464  Q
    ||||||||| |||||||||||||||||||||||    
T  17830002 cagacatgtttccttgcttcagctcaaggaatt 17829970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 332 - 464
Target Start/End: Original strand, 32603794 - 32603926
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| ||||||||||| || || |||||| || |||| | ||| ||||| || || ||||||||||| ||||| ||||||||||||||||| || |    
T  32603794 ccattctcgaacttgatgcatttcgagaactcaacattctcagcagtatagtgtgggtagaactttgccaactccacgaacttggcagcatactctgtca 32603893  T
Q  432 cagacatgtatccttgcttcagctcaaggaatt 464  Q
    ||||||||| |||||||||||||||||| ||||    
T  32603894 cagacatgtttccttgcttcagctcaagaaatt 32603926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 22990665 - 22990815
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||  |||||| | |||||  || ||||||||||| |||||||| ||||||||||||| |||         |||||||||||||||||| |||||    
T  22990665 caattgcctgcttgatcttagcacgcaagccattctcaaatttgatgcattttgaaaactcagtagt---------gtagtgcggataaaacttagccaa 22990755  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||||||| ||||||||||||| || ||||| | |||||| ||||||||||||||    
T  22990756 ttccacaaacttgacagcatactcagtcacggacatatttccttgtttcagctcaaggaa 22990815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 332 - 459
Target Start/End: Original strand, 3274754 - 3274881
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    ||||||||||||||||| || || ||||| ||||||||||| | ||||||||| ||||||||||| ||||  ||||||||||| | ||||||||| || |    
T  3274754 ccattctcaaacttgatacatttcgaaaattcagcagtctcagcagtgtagtgtggataaaacttagccagctccacaaactttgtagcatactctgtca 3274853  T
Q  432 cagacatgtatccttgcttcagctcaag 459  Q
    ||||||| |  ||||| |||||||||||    
T  3274854 cagacatattaccttgtttcagctcaag 3274881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 380 - 462
Target Start/End: Original strand, 22043515 - 22043597
Alignment:
Q  380 tagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||| || ||| |||||| ||||||||||| |||||||||    
T  22043515 tagtgcggatagaactttgccaactccacaaacttggcagcatactctgtcacaaacatgtttccttgcttcaactcaaggaa 22043597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 22117310 - 22117180
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| |||||||||||  | || ||||||||| |||| | ||| |||||||| || ||||||| ||  ||||| ||||||||||||||||| || |    
T  22117310 ccattctcgaacttgatgcatctcgagaactcagcattctcagcagtatagtgcgggtagaactttgacagctccacgaacttggcagcatactctgtca 22117211  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||| ||||||||||| |||||||||    
T  22117210 cagacatgtttccttgcttcaactcaaggaa 22117180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 335 - 464
Target Start/End: Original strand, 19116049 - 19116178
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||||| ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || || |    
T  19116049 ttctcgaacttgatgcatctcgagaactcagcattctctgcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacgg 19116148  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | |||||||||||||||||||||||    
T  19116149 acatatttccttgcttcagctcaaggaatt 19116178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 335 - 464
Target Start/End: Complemental strand, 20015395 - 20015266
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||||| ||| |||||| |||| ||||| | ||  ||||| ||||||||||||||||| || ||||    
T  20015395 ttctcgaacttgatgcatctcgagaactcagcattctctgcagtatagtgcagatagaacttagacagctccacgaacttggcagcatactctgtcacag 20015296  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||||| ||||||||||| |||||||||||    
T  20015295 acatgtttccttgcttcaactcaaggaatt 20015266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 333 - 462
Target Start/End: Complemental strand, 22126093 - 22125964
Alignment:
Q  333 cattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaac 432  Q
    ||||||| |||||||||||  | || ||||||||| |||| | ||| |||||||| || ||||||| ||  ||||| ||||||||||||||||| || ||    
T  22126093 cattctcgaacttgatgcatctcgagaactcagcattctcagcagtatagtgcgggtagaactttgacagctccacgaacttggcagcatactctgtcac 22125994  T
Q  433 agacatgtatccttgcttcagctcaaggaa 462  Q
    |||||||| ||||||||||| |||||||||    
T  22125993 agacatgtttccttgcttcaactcaaggaa 22125964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 392 - 464
Target Start/End: Complemental strand, 22114477 - 22114405
Alignment:
Q  392 aactttgccaattccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaatt 464  Q
    ||||||||||| ||||| ||||||||||||||||| || |||||||||| ||||||||||| |||||||||||    
T  22114477 aactttgccaactccacgaacttggcagcatactcggtcacagacatgtttccttgcttcaactcaaggaatt 22114405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 437
Target Start/End: Original strand, 21929048 - 21929182
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||| ||||||||||| ||||| |  || ||||| ||||||||||| || || || |||||||||||||| | ||| ||||| ||||| |||||||| |     
T  21929048 caatagccctcttgatatcagctctcaaaccattttcaaacttgatacatttggagaactcagcagtctccgcagtatagtgaggatagaactttgcaag 21929147  T
Q  403 ttccacaaacttggcagcatactcagtaacagaca 437  Q
     ||||||||||| || ||||||||||| |||||||    
T  21929148 ctccacaaactttgctgcatactcagtcacagaca 21929182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 30310276 - 30310146
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| ||||||||||| || || |||||||||||||| | ||  ||||| ||||| ||||||||| | ||||| || ||||||||||| || || |    
T  30310276 ccattctcgaacttgatgcatttcgagaactcagcagtctcagcagcatagtgtggatagaactttgccgactccacgaaattggcagcataatctgtca 30310177  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    || ||||||  ||||| ||||||||||||||    
T  30310176 catacatgttcccttgtttcagctcaaggaa 30310146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 359 - 464
Target Start/End: Complemental strand, 17671130 - 17671025
Alignment:
Q  359 aactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaa 458  Q
    ||||||| | |||| | ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || |||||||| | |||||||||||||||||    
T  17671130 aactcagaattctcagcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacagacatatttccttgcttcagctcaa 17671031  T
Q  459 ggaatt 464  Q
    ||||||    
T  17671030 ggaatt 17671025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 335 - 462
Target Start/End: Original strand, 18860226 - 18860353
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| ||||||||||| || || ||||||||| |||| | ||| |||||||| || ||||| ||||  ||||| |||||||||||||||||  | ||||    
T  18860226 ttctcgaacttgatgcatttcgagaactcagcattctcagcagtatagtgcgggtagaacttcgccagctccacgaacttggcagcatactctctcacag 18860325  T
Q  435 acatgtatccttgcttcagctcaaggaa 462  Q
    |||| | ||||| ||||| |||||||||    
T  18860326 acatatttccttacttcaactcaaggaa 18860353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 399 - 462
Target Start/End: Original strand, 22524129 - 22524192
Alignment:
Q  399 ccaattccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||| ||||||||||||||||||| ||  || ||||||| |||||||||||||||||||||    
T  22524129 ccaattctacaaacttggcagcatacttagacaccgacatgtttccttgcttcagctcaaggaa 22524192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 380 - 462
Target Start/End: Complemental strand, 22710354 - 22710272
Alignment:
Q  380 tagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||||||||||||||||| || |||||||| ||||||||||| || || ||||| |  |||||||||| ||| |||||    
T  22710354 tagtgcggataaaactttgccaactcaacaaacttagcagcatactccgttactgacatatcaccttgcttcaactccaggaa 22710272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 464
Target Start/End: Complemental strand, 19481181 - 19481076
Alignment:
Q  359 aactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaa 458  Q
    ||||||| | |||| | ||| |||||||| || ||||| | ||  ||||| ||||||||||||||||| || || ||||| | |||||||||||||||||    
T  19481181 aactcagaattctcagcagtatagtgcgggtagaacttcgacagctccacgaacttggcagcatactctgtcacggacatatttccttgcttcagctcaa 19481082  T
Q  459 ggaatt 464  Q
    ||||||    
T  19481081 ggaatt 19481076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 456
Target Start/End: Complemental strand, 21998572 - 21998448
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| || ||||| ||||| || |||||||| ||||| |  ||||| || ||||||||||| || |  ||||||||| | ||||||||||| || |    
T  21998572 ccattctcgaatttgatacacttggagaactcagctgtctccgcggtgtaatgtggataaaacttagcaagctccacaaaccttgcagcatactccgtta 21998473  T
Q  432 cagacatgtatccttgcttcagctc 456  Q
    | ||||| | |||||||||||||||    
T  21998472 ctgacatatctccttgcttcagctc 21998448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 459
Target Start/End: Complemental strand, 6606601 - 6606474
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    ||||| |||||||| ||||||||||| || || |||||||| | |||||| || ||||| || ||||| |  |||||||| || |||||||||||||| |    
T  6606601 ccattttcaaacttaatgcactttgagaattccgcagtctcggcagtgtaatgtggatagaattttgcaagctccacaaatttagcagcatactcagtta 6606502  T
Q  432 cagacatgtatccttgcttcagctcaag 459  Q
    | ||||| |  ||||| ||||| |||||    
T  6606501 ccgacatatcaccttgtttcagttcaag 6606474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 456
Target Start/End: Complemental strand, 22027410 - 22027288
Alignment:
Q  334 attctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaaca 433  Q
    |||||||||||| || || || || || ||||| ||||| |  || ||||| || || |||||||| | |||||||||||| ||||||||||||  ||||    
T  22027410 attctcaaactttatacatttggagaattcagctgtctccgctgtatagtgagggtagaactttgcaagttccacaaactttgcagcatactcaacaaca 22027311  T
Q  434 gacatgtatccttgcttcagctc 456  Q
    |||||||  || |||||||||||    
T  22027310 gacatgttaccctgcttcagctc 22027288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 332 - 429
Target Start/End: Original strand, 20391735 - 20391832
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagt 429  Q
    ||||||| |||||| |||||||| || |||||||||||||| | |||||| || |||||||| ||||  |  ||||  ||||| ||||||||||||||    
T  20391735 ccattctaaaactttatgcacttggagaactcagcagtctcggcagtgtaatgtggataaaattttgtaagctccatgaactttgcagcatactcagt 20391832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 456
Target Start/End: Complemental strand, 21982086 - 21981962
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| || ||||| ||||| || |||||||| ||||| |  ||||| || ||||||||||| || |  ||||||||| | |||| |||||| || |    
T  21982086 ccattctcgaatttgatacacttggagaactcagctgtctccgcggtgtaatgtggataaaacttagcaagctccacaaaccttgcagtatactccgtta 21981987  T
Q  432 cagacatgtatccttgcttcagctc 456  Q
    | ||||| | |||||||||||||||    
T  21981986 ctgacatatctccttgcttcagctc 21981962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 456
Target Start/End: Complemental strand, 22004213 - 22004089
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| || ||||| ||||| || |||||||| ||||| |  ||||| || ||||||||||| || |  ||||||||| | |||| |||||| || |    
T  22004213 ccattctcgaatttgatacacttggagaactcagctgtctccgcggtgtaatgtggataaaacttagcaagctccacaaaccttgcagaatactccgtta 22004114  T
Q  432 cagacatgtatccttgcttcagctc 456  Q
    | ||||| | |||||||||||||||    
T  22004113 ctgacatatctccttgcttcagctc 22004089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 374
Target Start/End: Complemental strand, 1757950 - 1757879
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctg 374  Q
    ||||||| || ||||| ||||||| ||| || ||||| || ||||| ||||| |||||||||||||||||||    
T  1757950 caattgctcttttgatctcagcacgtaaaccgttctcgaatttgatacacttcgaaaactcagcagtctctg 1757879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 438
Target Start/End: Complemental strand, 16268356 - 16268250
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    ||||| ||||||||||||||||| || |||||||| ||||| | | |||| || ||||| |||   || | |||||||||||| |||||||| || ||||    
T  16268356 ccattttcaaacttgatgcacttggagaactcagctgtctccgcactgtaatgaggatagaacgcagcaagttccacaaactttgcagcatattccgtaa 16268257  T
Q  432 cagacat 438  Q
    | |||||    
T  16268256 cggacat 16268250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 462
Target Start/End: Complemental strand, 17354937 - 17354900
Alignment:
Q  425 tcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  17354937 tcagtcacagacatgtttccttgcttcagctcaaggaa 17354900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 434
Target Start/End: Complemental strand, 29300561 - 29300456
Alignment:
Q  329 aacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcag 428  Q
    |||||||| ||||||||||| ||||| || |||||||| ||||| | | |||| || || || ||||| || | |||||| ||||| |||||||| || |    
T  29300561 aacccattttcaaacttgatacacttggagaactcagctgtctccgcattgtaatgggggtagaacttagcaagttccacgaacttagcagcatattctg 29300462  T
Q  429 taacag 434  Q
    ||||||    
T  29300461 taacag 29300456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 2e-56; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 303 - 462
Target Start/End: Complemental strand, 15144406 - 15144248
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||||||||||||||| ||||||| |||| | |||||||||||||||||||||||||||||||||||||  || |||| |||||||||||||||||||||    
T  15144406 caattgccctcttgatctcagcacgtaactcgttctcaaacttgatgcactttgaaaactcagcagtcttgggggtgt-gtgcggataaaactttgccaa 15144308  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||    
T  15144307 ttccacaaacttggcagcatactcagtcacatacatgtttccttgcttcagctcaaggaa 15144248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 311 - 462
Target Start/End: Complemental strand, 16241560 - 16241409
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    ||||| || ||||||| ||| || ||||| || ||||| ||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||    
T  16241560 ctctttatctcagcacgtaaaccgttctcgaatttgatacacttcgaatactcagcagtctctggagtgtaatgcggataaaactttgccaattccaaaa 16241461  T
Q  411 acttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||||||||||||| ||| |||||| |||||||||||||||||||||    
T  16241460 acttggcagcatactcagtcacaaacatgtttccttgcttcagctcaaggaa 16241409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 16219742 - 16219901
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||| |||||| |||||||  || ||||||||||| ||||| || || |||||||||||| |||| | ||||||||||||||||||||| |||||    
T  16219742 caattgcccgcttgatctcagcacgcaagccattctcaaatttgatacatttggaaaactcagcaatctcagcagtgtagtgcggataaaacttagccaa 16219841  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||||||||||||||| ||||| ||  |||| | |||||||||||||||||||||    
T  16219842 ttccacaaacttggcagcatattcagtcactcacatatttccttgcttcagctcaaggaa 16219901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 303 - 462
Target Start/End: Complemental strand, 15494 - 15335
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||| ||||| || |||||||  || || |||||||| ||||| ||||||||||||||||||||||| | ||| ||||| ||||| |||||||||||    
T  15494 caattgctctcttaatctcagcacgcaaaccgttctcaaatttgatacactttgaaaactcagcagtctcggcagtatagtgtggatagaactttgccaa 15395  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     ||||||||||||||| ||||||| || || ||||||| |||||||||||||||||||||    
T  15394 ctccacaaacttggcaacatactctgtcactgacatgtttccttgcttcagctcaaggaa 15335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 14163024 - 14163183
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||||||||||||||| ||||||| |||  | ||||| ||||||||||| || || ||||| ||| |||| | ||| ||||||||||| |||||||||||    
T  14163024 caattgccctcttgatctcagcacgtaaatcgttctcgaacttgatgcatttggagaactctgcattctcagcagtatagtgcggatagaactttgccaa 14163123  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    |||||| |||||||||||||||||||| || ||||||| ||| |||||||||||||||||    
T  14163124 ttccacgaacttggcagcatactcagtcaccgacatgtttccctgcttcagctcaaggaa 14163183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 16248105 - 16247975
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| ||||||||||| || || |||||||||||||| | ||| || ||||| || ||||||||||| ||||||||||||||||||||||| || |    
T  16248105 ccattctcgaacttgatgcatttcgagaactcagcagtctcagcagtatattgcgggtagaactttgccaactccacaaacttggcagcatactctgtca 16248006  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||| |||||||||||||||||||||    
T  16248005 cagacatgtttccttgcttcagctcaaggaa 16247975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 303 - 462
Target Start/End: Complemental strand, 16350200 - 16350041
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||||||| || ||||  |  || ||||||||||||||||| |||||||| |||| ||||||||| | ||  || ||||||||||||||||||||    
T  16350200 caattgccctcttaatatcaggccgcaaaccattctcaaacttgattcactttgagaacttagcagtctcagcagcataatgcggataaaactttgccaa 16350101  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     |  ||||||||||||||||||||||| || ||||||| |||||| ||||||||||||||    
T  16350100 cttaacaaacttggcagcatactcagtcacggacatgtttccttggttcagctcaaggaa 16350041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 303 - 429
Target Start/End: Original strand, 16223062 - 16223188
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||| |||||| |||||||  || ||||||||||| ||||| || || |||||||||||| |||| | ||||||||||||||||||||| |||||    
T  16223062 caattgcccgcttgatctcagcacgcaagccattctcaaatttgatacatttggaaaactcagcaatctcagcagtgtagtgcggataaaacttagccaa 16223161  T
Q  403 ttccacaaacttggcagcatactcagt 429  Q
    ||||||||||||||||||||| |||||    
T  16223162 ttccacaaacttggcagcatattcagt 16223188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 8590 - 8749
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||| ||||| || |||||||  || || || ||||| ||||| ||||||||||||||||||||||| | ||| ||||||||||| |||||||||||    
T  8590 caattgctctcttaatctcagcacacaaaccgttatcaaatttgatacactttgaaaactcagcagtctcggcagtatagtgcggatagaactttgccaa 8689  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     |||| ||| |||||||||||||| || |  ||||||| |||||||||||| ||||||||    
T  8690 ctccataaaattggcagcatactctgtcattgacatgtttccttgcttcaggtcaaggaa 8749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 14700013 - 14700172
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||| |||||| ||| |||  ||  |||||||||| ||||||||||| |||||||||||||||||   |||||| |||||||||||||| || |     
T  14700013 caattgcccgcttgatctcaacacgcaagtcattctcaaatttgatgcacttagaaaactcagcagtctcaacagtgtaatgcggataaaacttagctag 14700112  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||| || |||||||| ||||| || ||||| | |||||||||||||||||||||    
T  14700113 ttccacaaattttgcagcatattcagtcactgacatatttccttgcttcagctcaaggaa 14700172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 332 - 464
Target Start/End: Original strand, 13513933 - 13514065
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| ||||||||||| || || |||||| ||||||| | ||  || |  ||||| ||||||||||| ||||||||||||||||||||||| || |    
T  13513933 ccattctcgaacttgatgcatttcgagaactcaacagtctcagcagaataataaggatagaactttgccaactccacaaacttggcagcatactcggtca 13514032  T
Q  432 cagacatgtatccttgcttcagctcaaggaatt 464  Q
    | ||||||| |||||||||||||||||||||||    
T  13514033 ccgacatgtttccttgcttcagctcaaggaatt 13514065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 332 - 464
Target Start/End: Complemental strand, 18604248 - 18604116
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| ||||||||||| || || | |||| || |||| | ||| ||||| || || ||||||||||| ||||| ||||||||||||||||| || |    
T  18604248 ccattctcgaacttgatgcatttcgagagctcaacattctcagcagtatagtgtgggtagaactttgccaactccacgaacttggcagcatactctgtca 18604149  T
Q  432 cagacatgtatccttgcttcagctcaaggaatt 464  Q
    ||||||||| |||||||||||||||||||||||    
T  18604148 cagacatgtttccttgcttcagctcaaggaatt 18604116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 335 - 464
Target Start/End: Complemental strand, 8050052 - 8049923
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||||| ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || ||||    
T  8050052 ttctcgaacttgatgcatctcgagaactcagcattctctgcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacag 8049953  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||||| ||||||||||| |||||||||||    
T  8049952 acatgtttccttgcttcaactcaaggaatt 8049923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 335 - 464
Target Start/End: Original strand, 8389995 - 8390124
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||||| ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || || |    
T  8389995 ttctcgaacttgatgcatctcgagaactcagcattctctgcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacgg 8390094  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | |||||||||||||||||||||||    
T  8390095 acatatttccttgcttcagctcaaggaatt 8390124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 335 - 464
Target Start/End: Original strand, 12480183 - 12480312
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||||| ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || || |    
T  12480183 ttctcgaacttgatgcatctcgagaactcagcattctctgcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacgg 12480282  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | |||||||||||||||||||||||    
T  12480283 acatatttccttgcttcagctcaaggaatt 12480312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 335 - 464
Target Start/End: Complemental strand, 17091578 - 17091449
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||||| ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || || |    
T  17091578 ttctcgaacttgatgcatctcgagaactcagcattctctgcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacgg 17091479  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | |||||||||||||||||||||||    
T  17091478 acatatttccttgcttcagctcaaggaatt 17091449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 335 - 464
Target Start/End: Original strand, 23959330 - 23959459
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||||| ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || || |    
T  23959330 ttctcgaacttgatgcatctcgagaactcagcattctctgcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacgg 23959429  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | |||||||||||||||||||||||    
T  23959430 acatatttccttgcttcagctcaaggaatt 23959459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 335 - 462
Target Start/End: Complemental strand, 14300408 - 14300281
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||| | ||| |||||||| || ||||||| || ||||||||||||||||||||||||    ||||    
T  14300408 ttctcgaacttgatgcatctcgagaactcagcattctcagcagtatagtgcgggtagaactttgacagttccacaaacttggcagcatactctaccacag 14300309  T
Q  435 acatgtatccttgcttcagctcaaggaa 462  Q
    |||||| ||||||||||| |||||||||    
T  14300308 acatgtttccttgcttcaactcaaggaa 14300281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 18223902 - 18223772
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    ||||| || ||||||||||| || || |||||||||||||| | ||  ||||||||||| ||||||||||| |||||||| |||||||| |||||  | |    
T  18223902 ccattgtcgaacttgatgcatttcgagaactcagcagtctcagcagcatagtgcggatagaactttgccaactccacaaatttggcagcgtactctttca 18223803  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    || ||||||  ||||| ||||||||||||||    
T  18223802 caaacatgttcccttgtttcagctcaaggaa 18223772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 335 - 464
Target Start/End: Complemental strand, 19775222 - 19775093
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||| | ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || || |    
T  19775222 ttctcgaacttgatgcatctcgagaactcagcattctcagcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacgg 19775123  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | |||||||||||||||||||||||    
T  19775122 acatatttccttgcttcagctcaaggaatt 19775093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 332 - 464
Target Start/End: Original strand, 40476620 - 40476752
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| |||||||||||  | || |||||| || |||| | ||| |||||||| || ||||| | ||  ||||| ||||||| ||||||||| || |    
T  40476620 ccattctcgaacttgatgcatctcgagaactcatcattctcagcagtatagtgcgggtagaacttcgacagctccacgaacttggaagcatactctgtca 40476719  T
Q  432 cagacatgtatccttgcttcagctcaaggaatt 464  Q
    ||||||||| |||||||||||||||||||||||    
T  40476720 cagacatgtttccttgcttcagctcaaggaatt 40476752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 335 - 462
Target Start/End: Complemental strand, 16233421 - 16233294
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||||| ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || || |    
T  16233421 ttctcgaacttgatgcatctcgagaactcagcattctctgcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacgg 16233322  T
Q  435 acatgtatccttgcttcagctcaaggaa 462  Q
    |||||| |||||||||||  ||||||||    
T  16233321 acatgtttccttgcttcaattcaaggaa 16233294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 459
Target Start/End: Original strand, 19635719 - 19635843
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||| | ||| |||||||| || ||||||| ||  ||||| ||||||||||||||||| || |||     
T  19635719 ttctcgaacttgatgcatctcgagaactcagcattctcagcagtatagtgcgggtagaactttgacagctccacgaacttggcagcatactctgtcacat 19635818  T
Q  435 acatgtatccttgcttcagctcaag 459  Q
    |||||| ||||||||||| ||||||    
T  19635819 acatgtttccttgcttcaactcaag 19635843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 332 - 438
Target Start/End: Complemental strand, 14993072 - 14992966
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||||||||||||||| || || ||||||||  |||| | ||| || || |||||||||||||| |  ||||||||||| || ||||||||||| |    
T  14993072 ccattctcaaacttgatgcatttggagaactcagctatctccgcagtataatgaggataaaactttgcaagctccacaaacttagctgcatactcagtta 14992973  T
Q  432 cagacat 438  Q
    |||||||    
T  14992972 cagacat 14992966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 311 - 440
Target Start/End: Original strand, 27903946 - 27904075
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| |  || ||||| ||||||||||| || || || |||||||| ||||| | ||||||||| |||||||||||||| | ||||   |    
T  27903946 ctcttgatatcagctctcaagccattttcaaacttgatacatttggagaactcagctgtctccgcagtgtagtgaggataaaactttgcaagttccgtga 27904045  T
Q  411 acttggcagcatactcagtaacagacatgt 440  Q
    |||| ||||||||||| || ||||||||||    
T  27904046 acttagcagcatactctgtgacagacatgt 27904075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 311 - 464
Target Start/End: Complemental strand, 51603502 - 51603349
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| |  || |||||||||||||| |||||||| || || ||||| ||||| || |  || || ||||| |||||||| |  |||||||    
T  51603502 ctcttgatgtcagctctcaagccattctcaaactttatgcacttggagaattcagctgtctccggggcataatggggatagaactttgcaagctccacaa 51603403  T
Q  411 acttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaatt 464  Q
    | || ||||||||||||  ||||||||| |  || ||||||| ||| |||||||    
T  51603402 attttgcagcatactcaacaacagacatatcaccctgcttcaactccaggaatt 51603349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 311 - 464
Target Start/End: Complemental strand, 53750180 - 53750027
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| |  || |||||||||||||| |||||||| || || ||||| ||||| || |  || || ||||| |||||||| |  |||||||    
T  53750180 ctcttgatgtcagctctcaagccattctcaaactttatgcacttggagaattcagctgtctccggggcataatggggatagaactttgcaagctccacaa 53750081  T
Q  411 acttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaatt 464  Q
    | || ||||||||||||  ||||||||| |  || ||||||| ||| |||||||    
T  53750080 attttgcagcatactcaacaacagacatatcaccctgcttcaactccaggaatt 53750027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 459
Target Start/End: Original strand, 13879692 - 13879819
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    ||||| |||||||| ||||||||||| ||||||| |||||| | ||| || |  ||||| || ||||| |  ||||||||||| |||||||||| ||| |    
T  13879692 ccattttcaaacttaatgcactttgagaactcagtagtctcagcagtataatatggatagaattttgcaagctccacaaacttagcagcatacttagtta 13879791  T
Q  432 cagacatgtatccttgcttcagctcaag 459  Q
    | ||||| |  ||||| ||||| |||||    
T  13879792 ccgacatatcaccttgtttcagttcaag 13879819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 438
Target Start/End: Complemental strand, 11203924 - 11203815
Alignment:
Q  329 aacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcag 428  Q
    |||||||||||||| ||||| ||||| || |||||||| |||||   | | ||||| || || ||||| || | |||||||||| | ||||||||||| |    
T  11203924 aacccattctcaaatttgatacacttggagaactcagctgtctccacactatagtgagggtagaacttagcaagttccacaaacctagcagcatactccg 11203825  T
Q  429 taacagacat 438  Q
    |||| |||||    
T  11203824 taacggacat 11203815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 16151290 - 16151343
Alignment:
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctc 456  Q
    |||||||||||| ||||||||||| || ||||||||||  || |||||||||||    
T  16151290 ttccacaaactttgcagcatactctgtgacagacatgtcaccctgcttcagctc 16151343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 16155436 - 16155489
Alignment:
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctc 456  Q
    |||||||||||| ||||||||||| || ||||||||||  || |||||||||||    
T  16155436 ttccacaaactttgcagcatactctgtgacagacatgtcaccctgcttcagctc 16155489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 372
Target Start/End: Complemental strand, 44658576 - 44658515
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctc 372  Q
    |||||||| ||||| |  |||||||||||||||||||| ||||| || |||||||| |||||    
T  44658576 ctcttgatgtcagccctcaacccattctcaaacttgatacacttggagaactcagctgtctc 44658515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 111; Significance: 8e-56; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 302 - 456
Target Start/End: Complemental strand, 17071 - 16917
Alignment:
Q  302 tcaattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgcca 401  Q
    |||||||||||||| || |||  || |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17071 tcaattgccctcttaatctcaagacgtaacccgttctcaaatttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgcca 16972  T
Q  402 attccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctc 456  Q
    ||||||||||||||||||||| |||||| |||||||||| | |||||||||||||    
T  16971 attccacaaacttggcagcattctcagttacagacatgttttcttgcttcagctc 16917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 110; Significance: 3e-55; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 303 - 464
Target Start/End: Original strand, 21883263 - 21883424
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||| ||| || |||||||||||  |||||||||||||    
T  21883263 caattgccctcttgatctcagcacgtaacccattctcaaacttgatgcactttgagaactcagcagcctcaggggtgtagtgcgggcaaaactttgccaa 21883362  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaatt 464  Q
     |||||||||||||||||||||||||| || ||||||| |||||||||||| ||||||||||    
T  21883363 ctccacaaacttggcagcatactcagtcacggacatgtttccttgcttcagttcaaggaatt 21883424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 23474680 - 23474839
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||| |||||| ||||||   || |||| |||||| ||||||||||| || |||||||||||||| | ||||||||||||||||||||| |||||    
T  23474680 caattgcccgcttgatctcagcaggcaagccatcctcaaatttgatgcacttggagaactcagcagtctcggtagtgtagtgcggataaaacttagccaa 23474779  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     || |||||||| |||||||||||||| || ||||| | |||||||||||||||||||||    
T  23474780 ctctacaaactttgcagcatactcagtcactgacatatttccttgcttcagctcaaggaa 23474839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 322 - 462
Target Start/End: Original strand, 25429925 - 25430065
Alignment:
Q  322 agcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagca 421  Q
    ||||| ||| || ||||| || ||||| ||||| |||||| ||||||||||||||||||| ||| |||||||||||| ||||||||||||||||| ||||    
T  25429925 agcacgtaaaccgttctcgaatttgatacacttcgaaaacccagcagtctctggagtgtaatgcagataaaactttgtcaattccacaaacttggtagca 25430024  T
Q  422 tactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||| || || ||||||| |||||||||||||||||||||    
T  25430025 tactctgtcactgacatgtttccttgcttcagctcaaggaa 25430065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 23526537 - 23526696
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||| |||||||| ||||| |  || |||||||| |||||||| ||||||||||| |  | |||||||| || ||| |||||||| |||||||||||    
T  23526537 caattgctctcttgatctcagcccgcaatccattctcgaacttgatacactttgaaaagttggtagtctctgcagcgtaatgcggatagaactttgccaa 23526636  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     ||||||||||||| |||||||||||| || ||||||| |||||||||||||||||||||    
T  23526637 ctccacaaacttggtagcatactcagtcactgacatgtttccttgcttcagctcaaggaa 23526696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 23461419 - 23461549
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| ||||||||||||||||| |||||||||||||| | ||  ||||||||||| ||||||||||| ||||||||| |||||||||||||||| |    
T  23461419 ccattctcgaacttgatgcactttgagaactcagcagtctcagcagcatagtgcggatagaactttgccaactccacaaacgtggcagcatactcagtca 23461518  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    |  |||||| |||||| ||||||||||||||    
T  23461519 cgaacatgtttccttgattcagctcaaggaa 23461549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 303 - 464
Target Start/End: Complemental strand, 21331889 - 21331728
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||| |||||| |||||||  || ||||||||||| ||||| || |||||||||||||||||||| | || ||| ||||||||||||||  | |     
T  21331889 caattgcccgcttgatctcagcacgcaagccattctcaaatttgatacattttgaaaactcagcagtctcagcagggtaatgcggataaaacttaactag 21331790  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaatt 464  Q
    ||||||||||||| ||||||| ||||| || ||||| | |||||||||||||||||||||||    
T  21331789 ttccacaaacttgacagcatattcagtcactgacatatttccttgcttcagctcaaggaatt 21331728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 20804112 - 20804242
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| |||||||| || ||||| |||||||||||||| | ||  ||||||||||| ||||||||||| || ||||||||||||||||||||||| |    
T  20804112 ccattctcgaacttgatacattttgagaactcagcagtctcagcagcatagtgcggatagaactttgccaactcaacaaacttggcagcatactcagtca 20804211  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    | |||| || |||||||||||||||||||||    
T  20804212 cggacaggtttccttgcttcagctcaaggaa 20804242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 313 - 459
Target Start/End: Complemental strand, 21631289 - 21631143
Alignment:
Q  313 cttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaac 412  Q
    |||||| |||||||  || ||||||||||| ||||||||||| || |||||||||||||| | ||||||||||| ||||||||| ||||  |||||||||    
T  21631289 cttgatctcagcacgcaagccattctcaaatttgatgcacttggagaactcagcagtctcagtagtgtagtgcgaataaaacttagccaggtccacaaac 21631190  T
Q  413 ttggcagcatactcagtaacagacatgtatccttgcttcagctcaag 459  Q
    || ||||||| ||| || || |||||||  || ||||||||||||||    
T  21631189 tttgcagcatgctcggtcaccgacatgtcaccctgcttcagctcaag 21631143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 335 - 462
Target Start/End: Complemental strand, 37288367 - 37288240
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||| | |||||||||||| || ||||||| ||  ||||||||||||||||||||||| || ||||    
T  37288367 ttctcgaacttgatgcatctcgagaactcagcattctcagcagtgtagtgcgggtagaactttgacagctccacaaacttggcagcatactctgtcacag 37288268  T
Q  435 acatgtatccttgcttcagctcaaggaa 462  Q
    |||||| ||||||||||| |||||||||    
T  37288267 acatgtttccttgcttcaactcaaggaa 37288240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 359 - 464
Target Start/End: Original strand, 22351458 - 22351563
Alignment:
Q  359 aactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaa 458  Q
    ||||||||| |||| | ||| |||||||| || ||||| ||||| || |||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  22351458 aactcagcattctcagcagtatagtgcgggtagaacttcgccaactcaacaaacttggcagcatactctgtcacagacatgtttccttgcttcagctcaa 22351557  T
Q  459 ggaatt 464  Q
    ||||||    
T  22351558 ggaatt 22351563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 335 - 464
Target Start/End: Original strand, 27521921 - 27522050
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  |||| ||||||||| |||||| ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || || |    
T  27521921 ttctcgaacttgatgcatcttgagaactcagcattctctgcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacgg 27522020  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | |||||||||||||||||||||||    
T  27522021 acatatttccttgcttcagctcaaggaatt 27522050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 335 - 462
Target Start/End: Complemental strand, 22329758 - 22329631
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||| | ||| |||||||| || ||||||| || |||||| ||||||||||||||||| || ||||    
T  22329758 ttctcgaacttgatgcatctcgagaactcagcattctcagcagtatagtgcgggtagaactttgacagttccacgaacttggcagcatactctgtcacag 22329659  T
Q  435 acatgtatccttgcttcagctcaaggaa 462  Q
    |||||| ||||||||||| |||||||||    
T  22329658 acatgtttccttgcttcaactcaaggaa 22329631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 18782629 - 18782759
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| ||||||||||| || || |||||||| ||||| | ||  ||||||||||| ||||||||||| |||||||| |||||||||||||| || |    
T  18782629 ccattctcgaacttgatgcatttcgagaactcagcggtctcagcagcatagtgcggatagaactttgccaactccacaaatttggcagcatactctgtca 18782728  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||| || |||| | | |||||||||    
T  18782729 cagacatgtttctttgccttaactcaaggaa 18782759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 335 - 464
Target Start/End: Original strand, 16360017 - 16360146
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||||| ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || || |    
T  16360017 ttctcgaacttgatgcatctcgagaactcagcattctctgcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacgg 16360116  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | |||||||||||||||||||||||    
T  16360117 acatatttccttgcttcagctcaaggaatt 16360146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 335 - 464
Target Start/End: Original strand, 27613871 - 27614000
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||| | ||| |||||||| || ||||| | ||  ||||| ||||||||||||||||| || ||||    
T  27613871 ttctcgaacttgatgcatctcgagaactcagcattctccgcagtatagtgcgggtagaacttcgacagctccacgaacttggcagcatactctgtcacag 27613970  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||||| |||||||||||||||||||||||    
T  27613971 acatgtttccttgcttcagctcaaggaatt 27614000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 335 - 464
Target Start/End: Complemental strand, 27665374 - 27665245
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    |||||||||||||||||  | || ||||||||| |||||| ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || ||      
T  27665374 ttctcaaacttgatgcatctcgagaactcagcattctctgcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacga 27665275  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | |||||||||||||||||||||||    
T  27665274 acatatttccttgcttcagctcaaggaatt 27665245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 335 - 464
Target Start/End: Original strand, 34570009 - 34570138
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||||| ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || || |    
T  34570009 ttctcgaacttgatgcatctcgagaactcagcattctctgcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacgg 34570108  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | |||||||||||||||||||||||    
T  34570109 acatatttccttgcttcagctcaaggaatt 34570138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 335 - 464
Target Start/End: Original strand, 40712295 - 40712424
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||||| ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || || |    
T  40712295 ttctcgaacttgatgcatctcgagaactcagcattctctgcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacgg 40712394  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | |||||||||||||||||||||||    
T  40712395 acatatttccttgcttcagctcaaggaatt 40712424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 335 - 462
Target Start/End: Complemental strand, 14996610 - 14996483
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||| | ||| |||||||| || ||||||| ||  ||||| ||||||||||||||||| || ||||    
T  14996610 ttctcgaacttgatgcatctcgagaactcagcattctcagcagtatagtgcgggtagaactttgacagctccacgaacttggcagcatactctgtcacag 14996511  T
Q  435 acatgtatccttgcttcagctcaaggaa 462  Q
    |||||| ||||||||||| |||||||||    
T  14996510 acatgtttccttgcttcaactcaaggaa 14996483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 335 - 462
Target Start/End: Complemental strand, 29472944 - 29472817
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||| | ||| |||||||| || ||||||| ||  ||||| ||||||||||||||||| || ||||    
T  29472944 ttctcgaacttgatgcatctcgagaactcagcattctcagcagtatagtgcgggtagaactttgacagctccacgaacttggcagcatactctgtcacag 29472845  T
Q  435 acatgtatccttgcttcagctcaaggaa 462  Q
    |||||| ||||||||||| |||||||||    
T  29472844 acatgtttccttgcttcaactcaaggaa 29472817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 22138180 - 22138310
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| |||||||||||  | || ||||||||| |||| | ||| |||||||| || ||||| ||||  ||||| ||||||||||||||||| || |    
T  22138180 ccattctcgaacttgatgcatctcgagaactcagcattctcagcagtatagtgcgggtagaacttcgccagctccacgaacttggcagcatactctgtca 22138279  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||| | ||||||||||| |||||||||    
T  22138280 cagacatatttccttgcttcaactcaaggaa 22138310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 23537086 - 23536956
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| ||||||||||| || || |||| |||| |||  | ||  ||||||||||| || |||||||| | ||||||||||||||||||||| || |    
T  23537086 ccattctcgaacttgatgcatttcgagaactaagcaatcttagcagcatagtgcggatagaaatttgccaactacacaaacttggcagcatactcggtca 23536987  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    | |||||||  ||||||||||||||||||||    
T  23536986 ctgacatgttcccttgcttcagctcaaggaa 23536956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 335 - 462
Target Start/End: Complemental strand, 27682271 - 27682144
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| ||||   ||| |||||||| || ||||||| ||  ||||| ||||||||||||||||| || ||||    
T  27682271 ttctcgaacttgatgcatctcgagaactcagcattctcaacagtatagtgcgggtagaactttgacagctccacgaacttggcagcatactctgtcacag 27682172  T
Q  435 acatgtatccttgcttcagctcaaggaa 462  Q
    |||||| ||||||||||| |||||||||    
T  27682171 acatgtttccttgcttcaactcaaggaa 27682144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 332 - 438
Target Start/End: Complemental strand, 21560896 - 21560790
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||||||||| |||||||| || |||||||||||||| | |||||| || |||||||| || || |  ||||||||||| |||||||||||||| |    
T  21560896 ccattctcaaactttatgcacttggagaactcagcagtctcggcagtgtaatgtggataaaatttagcaagatccacaaactttgcagcatactcagtta 21560797  T
Q  432 cagacat 438  Q
    | |||||    
T  21560796 ctgacat 21560790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 335 - 464
Target Start/End: Original strand, 19773475 - 19773604
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||| | ||| ||||||||||| ||||| | ||  ||||| |||||||||||||| || || || |    
T  19773475 ttctcgaacttgatgcatctcgagaactcagcattctcagcagtatagtgcggatagaacttagacagctccacgaacttggcagcataatctgtcacgg 19773574  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | |||||||||||||||||||||||    
T  19773575 acatatttccttgcttcagctcaaggaatt 19773604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 332 - 464
Target Start/End: Original strand, 43122964 - 43123096
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    ||||| |||||||| || |||||||| |||||||||||||| |  || || ||||||||||| || || |  || |||||||| ||||||||  |||| |    
T  43122964 ccattttcaaacttaatacactttgagaactcagcagtctcagcggtataatgcggataaaagttagcaagctctacaaactttgcagcatatgcagtta 43123063  T
Q  432 cagacatgtatccttgcttcagctcaaggaatt 464  Q
    ||||||||| ||| ||||||| ||| |||||||    
T  43123064 cagacatgtctccctgcttcaactccaggaatt 43123096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 332 - 438
Target Start/End: Complemental strand, 16257907 - 16257801
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||||||||| |||||||| || ||||| || ||||||| | |||| || || || ||||| || | |||||||||||| ||||||||||| ||||    
T  16257907 ccattctcaaacttaatgcacttggagaactccgctgtctctgcactgtaatgagggtagaacttagcaagttccacaaacttagcagcatactccgtaa 16257808  T
Q  432 cagacat 438  Q
    | |||||    
T  16257807 ctgacat 16257801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 332 - 438
Target Start/End: Complemental strand, 22591626 - 22591520
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||||||||| |||||||| || ||||| || ||||||| | |||| || || || ||||| || | |||||||||||| ||||||||||| ||||    
T  22591626 ccattctcaaacttaatgcacttggagaactccgctgtctctgcactgtaatgagggtagaacttagcaagttccacaaacttagcagcatactccgtaa 22591527  T
Q  432 cagacat 438  Q
    | |||||    
T  22591526 ctgacat 22591520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 332 - 438
Target Start/End: Complemental strand, 22595181 - 22595075
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||||||||| |||||||| || ||||| || ||||||| | |||| || || || ||||| || | |||||||||||| ||||||||||| ||||    
T  22595181 ccattctcaaacttaatgcacttggagaactccgctgtctctgcactgtaatgagggtagaacttagcaagttccacaaacttagcagcatactccgtaa 22595082  T
Q  432 cagacat 438  Q
    | |||||    
T  22595081 ctgacat 22595075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 440
Target Start/End: Original strand, 22465474 - 22465555
Alignment:
Q  359 aactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacagacatgt 440  Q
    |||||||| ||||| | ||||||||| |||||||||||||| | ||||   ||||||||||||||||| || ||||||||||    
T  22465474 aactcagctgtctccgcagtgtagtgaggataaaactttgcaagttccgtgaacttggcagcatactctgtgacagacatgt 22465555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 462
Target Start/End: Original strand, 41774364 - 41774485
Alignment:
Q  341 aacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacagacatgt 440  Q
    |||||||||||  | || ||||||||| |||| | ||| |||||||| || |||||   ||  ||||| ||||||||||||||||| || ||||||||||    
T  41774364 aacttgatgcatctcgagaactcagcattctcagcagtatagtgcgggtagaacttcaacagctccacgaacttggcagcatactctgtcacagacatgt 41774463  T
Q  441 atccttgcttcagctcaaggaa 462  Q
     |||||||||||  ||||||||    
T  41774464 ttccttgcttcaattcaaggaa 41774485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 399
Target Start/End: Original strand, 20824929 - 20825017
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgc 399  Q
    ||||| || ||||| | ||| |||||||||||||||||||| || || |||||||| ||||| | ||||||||| || |||||||||||    
T  20824929 ctcttaatatcagcccttaaaccattctcaaacttgatgcatttggagaactcagctgtctccgcagtgtagtgagggtaaaactttgc 20825017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 438
Target Start/End: Complemental strand, 23077776 - 23077670
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||||||||| || ||||| || |||||||| ||||| | | |||| || || || ||||| || | |||||| ||||| ||||||||||| ||||    
T  23077776 ccattctcaaacttaatacacttggagaactcagctgtctccgcactgtaatgggggtagaacttagcaagttccacgaacttagcagcatactccgtaa 23077677  T
Q  432 cagacat 438  Q
    |||||||    
T  23077676 cagacat 23077670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 303 - 440
Target Start/End: Complemental strand, 14883891 - 14883754
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||| ||||| ||||| ||||| |  |||||||||||||||||||| ||||| || |||||||| ||||| | | |||| || || || ||  | || |     
T  14883891 caatagcccttttgatgtcagccctcaacccattctcaaacttgatacacttggagaactcagctgtctccgcactgtaatgagggtagaatgtggcaag 14883792  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgt 440  Q
     ||||||||||| ||||||||||| || ||||||||||    
T  14883791 ctccacaaactttgcagcatactctgtgacagacatgt 14883754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 464
Target Start/End: Original strand, 23670129 - 23670261
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    ||||| |||||||| || ||| |||| |||||||||||||| |  || || ||||||||||| || || |  || |||||||| ||||||||  |||| |    
T  23670129 ccattttcaaacttaatacaccttgagaactcagcagtctcagcggtataatgcggataaaatttagcaagctcaacaaactttgcagcatatgcagtta 23670228  T
Q  432 cagacatgtatccttgcttcagctcaaggaatt 464  Q
    ||||||||| ||| || |||| ||| |||||||    
T  23670229 cagacatgtctccctgtttcaactccaggaatt 23670261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 440
Target Start/End: Complemental strand, 28891813 - 28891705
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    ||||| || ||||||||||| || || |||||||| ||||| | ||||||||| || ||||||||||| | ||||   |||||||| |||||||| || |    
T  28891813 ccattttcgaacttgatgcatttggagaactcagctgtctccgcagtgtagtgagggtaaaactttgcaagttccgtgaacttggctgcatactccgtga 28891714  T
Q  432 cagacatgt 440  Q
    | |||||||    
T  28891713 ccgacatgt 28891705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 426
Target Start/End: Original strand, 21410695 - 21410741
Alignment:
Q  380 tagtgcggataaaactttgccaattccacaaacttggcagcatactc 426  Q
    ||||| ||||||||||||||||| || |||||||| |||||||||||    
T  21410695 tagtgtggataaaactttgccaactcaacaaacttagcagcatactc 21410741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 440
Target Start/End: Complemental strand, 21870178 - 21870041
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||| ||||||||||| ||| | |  || ||||| |||||||| || || || || |||||||| ||||| | | | || || ||||| ||||| || |     
T  21870178 caatagccctcttgatatcatctctcaaaccattttcaaactttatacatttggagaactcagctgtctccgcattataatgaggatagaacttagcaag 21870079  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgt 440  Q
    |||||||||||| ||||||||||| || ||||||||||    
T  21870078 ttccacaaacttcgcagcatactccgtcacagacatgt 21870041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 440
Target Start/End: Complemental strand, 21874458 - 21874321
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||| ||||||||||| ||| | |  || ||||| |||||||| || || || || |||||||| ||||| | | | || || ||||| ||||| || |     
T  21874458 caatagccctcttgatatcatctctcaaaccattttcaaactttatacatttggagaactcagctgtctccgcattataatgaggatagaacttagcaag 21874359  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgt 440  Q
    |||||||||||| ||||||||||| || ||||||||||    
T  21874358 ttccacaaacttcgcagcatactccgtcacagacatgt 21874321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 365
Target Start/End: Complemental strand, 26735627 - 26735566
Alignment:
Q  304 aattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcag 365  Q
    |||||||| ||| || |||||||  || ||||||||||| |||||||| |||||||||||||    
T  26735627 aattgcccgctttatctcagcacgcaaaccattctcaaatttgatgcattttgaaaactcag 26735566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 332 - 440
Target Start/End: Original strand, 20770635 - 20770743
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    ||||| || ||||||||||| || || |||||||| ||||| | ||||||||| || ||||||||||| | ||||   ||||| || |||||||| || |    
T  20770635 ccattttcgaacttgatgcatttggagaactcagctgtctccgcagtgtagtgagggtaaaactttgcaagttccgtgaacttagctgcatactccgtga 20770734  T
Q  432 cagacatgt 440  Q
    | |||||||    
T  20770735 ccgacatgt 20770743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 332 - 440
Target Start/End: Original strand, 20779410 - 20779518
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    ||||| || ||||||||||| || || |||||||| ||||| | ||||||||| || ||||||||||| | ||||   ||||| || |||||||| || |    
T  20779410 ccattttcgaacttgatgcatttggagaactcagctgtctccgcagtgtagtgagggtaaaactttgcaagttccgtgaacttagctgcatactccgtga 20779509  T
Q  432 cagacatgt 440  Q
    | |||||||    
T  20779510 ccgacatgt 20779518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 332 - 440
Target Start/End: Complemental strand, 28911659 - 28911551
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    ||||| || ||||||||||| || || |||||||  ||||| | ||||||||| || ||||||||||| | ||||   |||||||| |||||||| || |    
T  28911659 ccattttcgaacttgatgcatttggagaactcagttgtctccgcagtgtagtgagggtaaaactttgcaagttccgtgaacttggctgcatactccgtga 28911560  T
Q  432 cagacatgt 440  Q
    | |||||||    
T  28911559 ccgacatgt 28911551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 332 - 440
Target Start/End: Complemental strand, 28926927 - 28926819
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    ||||| || ||||||||||| || || |||||||  ||||| | ||||||||| || ||||||||||| | ||||   |||||||| |||||||| || |    
T  28926927 ccattttcgaacttgatgcatttggagaactcagttgtctccgcagtgtagtgagggtaaaactttgcaagttccgtgaacttggctgcatactccgtga 28926828  T
Q  432 cagacatgt 440  Q
    | |||||||    
T  28926827 ccgacatgt 28926819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 108; Significance: 5e-54; HSPs: 4)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 55220 - 55379
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||||||||||||||| |||| || |||||| ||||||| |||||| ||||| ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  55220 caattgccctcttgatctcaggacgtaacccgttctcaaccttgatacacttcgaaaactcagcagtctctggagtgtagtgcgaataaaattttgccaa 55319  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    |||||||||||||||| |||||||||| ||| |||||| |||||||||||||||||||||    
T  55320 ttccacaaacttggcaacatactcagtcacatacatgtttccttgcttcagctcaaggaa 55379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 32462 - 32621
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||||||| || ||||| |  || |||||||| |||||||| |||||  |||||||||||||||||  || ||| ||||||||||||||| ||||    
T  32462 caattgccctctttatatcagcccgcaatccattctcgaacttgatacacttcaaaaactcagcagtctctacagcgtaatgcggataaaacttttccaa 32561  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     || ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  32562 ctctacaaacttggcagcatactcagttacagacatgtttccttgcttcagctcaaggaa 32621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 416
Target Start/End: Complemental strand, 9787 - 9703
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttgg 416  Q
    |||||||| ||||||||||| || || |||||||||||||| | ||  ||||| || || ||||||||||| |||||||||||||    
T  9787 ccattctcgaacttgatgcatttcgagaactcagcagtctcagcagcatagtgggggtagaactttgccaactccacaaacttgg 9703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 420
Target Start/End: Complemental strand, 9931 - 9843
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagc 420  Q
    |||||||| ||||||||||| || || |||||||||||||| | ||  ||||  || || ||||||||||| ||||| |||||||||||    
T  9931 ccattctcgaacttgatgcatttcgagaactcagcagtctcagcagcatagttggggtagaactttgccaactccacgaacttggcagc 9843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 106; Significance: 7e-53; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 303 - 464
Target Start/End: Complemental strand, 194589 - 194428
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||||||| ||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||| ||||||||||||||||    
T  194589 caattgccttcttgatctcagcacgtaacccattctcaaacttgatacactttgaaaactcagcagtctcgggggtgtagtgcagataaaactttgccaa 194490  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaatt 464  Q
     || || |||||||||||||||||||| || ||||| | |||||||||||||||||||||||    
T  194489 ctctacgaacttggcagcatactcagtcacggacatatttccttgcttcagctcaaggaatt 194428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 16758 - 16628
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||||||||||||||| || || |||||||||||||| | ||| || |  || || ||||||||||| || |||||||||||||||||||| || |    
T  16758 ccattctcaaacttgatgcatttcgagaactcagcagtctcagcagtataatatgggtagaactttgccaactcaacaaacttggcagcatactccgtca 16659  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    | ||||||| | |||| ||||||||||||||    
T  16658 cggacatgtttacttgtttcagctcaaggaa 16628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 21280 - 21150
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||||||||||||||| || || |||||||||||||| | ||| || |  || || ||||||||||| || |||||||||||||||||||| || |    
T  21280 ccattctcaaacttgatgcatttcgagaactcagcagtctcagcagtataatatgggtagaactttgccaactcaacaaacttggcagcatactccgtca 21181  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    | ||||||| | |||| ||||||||||||||    
T  21180 cggacatgtttacttgtttcagctcaaggaa 21150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 104; Significance: 1e-51; HSPs: 2)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 474 - 633
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||||| | || |||||||  || || |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  474 caattgccctcgtaatctcagcacacaaaccgttctcaaatttgatacactttgaaaactcagcagtctctggagtgtagtgcggataaaaatttaccaa 573  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||    
T  574 ttccacaaacttggcagcatactcagtcacggacatgtttccttgcttcagctcaaggaa 633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 440
Target Start/End: Original strand, 3448 - 3585
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||| ||||||||||| ||||| |  |  ||||| |||||||| || || || || ||||| | |||||  | ||| ||||| ||||| ||||| || |     
T  3448 caatagccctcttgatatcagctctcaggccattttcaaacttaatacatttggagaactctgtagtcttcgcagtatagtgaggatagaacttagcgag 3547  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgt 440  Q
    |||||||||||| ||||||||||| || ||||||||||    
T  3548 ttccacaaacttcgcagcatactccgtcacagacatgt 3585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 9530 - 9689
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||||||| |||| || ||||||| |||||| |||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9530 caattgccttcttaatctcagcacgtaacccgttctcaaatttgatgcattttgaaaactcagcagtctctagagtgtagtgcggataaaactttgccaa 9629  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    ||| ||||||||||||||||||||||| |  ||||||| || ||||||||||||||||||    
T  9630 ttctacaaacttggcagcatactcagtcatggacatgtttctttgcttcagctcaaggaa 9689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 104; Significance: 1e-51; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 311 - 462
Target Start/End: Original strand, 11854 - 12005
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||| ||||||||| ||| || ||||| || |||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  11854 ctcttgttttcagcacgtaaaccgttctcgaatttgaagcattttgaaaactcatcagtctctggagtgtagtgcggataaaactttgccaattccacag 11953  T
Q  411 acttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  11954 acttggcagcatactcagtcacagacatgtttccttgcttcagctcaaggaa 12005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 14667 - 14826
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||| |||||||||||||||| ||| || ||||| || |||||||| || |||||||| |||||||  |||||||||||||| ||||||||||||||    
T  14667 caattgctctcttgatttcagcacgtaaaccgttctcgaatttgatgcatttcgaaaactctgcagtcttaggagtgtagtgcgggtaaaactttgccaa 14766  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||||||||||||||||||||| ||||||||||  ||| ||||||||||||||||    
T  14767 ttccacaaacttggcagcatactcagtcacagacatgttacctggcttcagctcaaggaa 14826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 1e-51; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 303 - 462
Target Start/End: Complemental strand, 20081166 - 20081008
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||||||||||||||| ||||||| |||||| |||||| ||||| | ||||||||||||||||||||||| || |||| |||||||||||||||||||||    
T  20081166 caattgccctcttgatctcagcacgtaacccgttctcacacttg-tacactttgaaaactcagcagtctcgggggtgtggtgcggataaaactttgccaa 20081068  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     |||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||    
T  20081067 ctccacaaacttggcagcatactcattcacagacatgtttccttgcttcagctcaaggaa 20081008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 335 - 462
Target Start/End: Original strand, 22402193 - 22402320
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    |||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |    
T  22402193 ttctcaaatttgatacactttgaaaactcagcagtctctagagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtcactg 22402292  T
Q  435 acatgtatccttgcttcagctcaaggaa 462  Q
    |||||| |||||||||||||||||||||    
T  22402293 acatgtttccttgcttcagctcaaggaa 22402320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 21752616 - 21752775
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||| |||||||| ||||||| ||| || ||||| || |||||||| || ||||||||||||||||||| ||| || ||||||||||||||||||||    
T  21752616 caattgctctcttgatctcagcacgtaaaccgttctcgaatttgatgcatttcgaaaactcagcagtctctgcagtataatgcggataaaactttgccaa 21752715  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     ||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||    
T  21752716 ctccacaaacttggcagcatactctgtcacagacatgtttccttgcttcagctcaaggaa 21752775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 344 - 462
Target Start/End: Complemental strand, 22459752 - 22459634
Alignment:
Q  344 ttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacagacatgtatc 443  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||| ||    
T  22459752 ttgatgcactttgaaaactcagcagtctcgggggtgtagtgcggataaaactttgccaactccacaaacttggcagcatactcagtcactgacatgtttc 22459653  T
Q  444 cttgcttcagctcaaggaa 462  Q
    |||||||||||||||||||    
T  22459652 cttgcttcagctcaaggaa 22459634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 344 - 462
Target Start/End: Complemental strand, 22470181 - 22470063
Alignment:
Q  344 ttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacagacatgtatc 443  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||| ||    
T  22470181 ttgatgcactttgaaaactcagcagtctcgggggtgtagtgcggataaaactttgccaactccacaaacttggcagcatactcagtcactgacatgtttc 22470082  T
Q  444 cttgcttcagctcaaggaa 462  Q
    |||||||||||||||||||    
T  22470081 cttgcttcagctcaaggaa 22470063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 22117283 - 22117442
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||| |||||| || ||||  || ||||||||||| |||||||| || ||||||||||||||||| | | ||||||||||||||||||| |||||    
T  22117283 caattgcccgcttgatctccgcacgcaagccattctcaaatttgatgcatttagaaaactcagcagtctcagcaatgtagtgcggataaaacttagccaa 22117382  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     |||||||||||||||||||| ||||| || ||||| | |||||||||||||||||||||    
T  22117383 ctccacaaacttggcagcatattcagtcactgacatatttccttgcttcagctcaaggaa 22117442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 24784619 - 24784489
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||||||||||||||| ||||| |||||||||||||| | ||| || || ||||||||||||||||| || ||||||||||||||||||||| | |    
T  24784619 ccattctcaaacttgatgcattttgagaactcagcagtctcagcagtataatggggataaaactttgccaactcaacaaacttggcagcatactcaatca 24784520  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||| |||||| ||||||||||||||    
T  24784519 cagacatgtttccttgtttcagctcaaggaa 24784489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 335 - 460
Target Start/End: Original strand, 19109967 - 19110092
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| ||||||||||| || ||||||||||||||||||| ||  || || ||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  19109967 ttctcgaacttgatgcatttcgaaaactcagcagtctctgcagcataatgtggataaaacttcgccaattcaacaaacttggcagcatactcagtcacag 19110066  T
Q  435 acatgtatccttgcttcagctcaagg 460  Q
    |||||| |||||||||||||||||||    
T  19110067 acatgtttccttgcttcagctcaagg 19110092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 332 - 464
Target Start/End: Complemental strand, 22435504 - 22435372
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| |||||||  ||||| ||||||||||||||||| | || ||| ||||||||||||||||| || || |||||| |||||||||||||||| |    
T  22435504 ccattctcgaacttgaaacacttcgaaaactcagcagtctcagcagcgtaatgcggataaaactttgcgaactcaacaaacatggcagcatactcagtca 22435405  T
Q  432 cagacatgtatccttgcttcagctcaaggaatt 464  Q
    | ||||||| |||||||||||||||||||||||    
T  22435404 cggacatgtttccttgcttcagctcaaggaatt 22435372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 332 - 464
Target Start/End: Complemental strand, 17041777 - 17041645
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| ||||||||||| || || ||||||||| |||| | ||| ||||| || || ||||||||||| ||||| ||||||||||||||||| || |    
T  17041777 ccattctcgaacttgatgcatttcgagaactcagcattctcagcagtatagtgtgggtagaactttgccaactccacgaacttggcagcatactctgtca 17041678  T
Q  432 cagacatgtatccttgcttcagctcaaggaatt 464  Q
    ||||||||| |||||||||||||||||||||||    
T  17041677 cagacatgtttccttgcttcagctcaaggaatt 17041645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 332 - 464
Target Start/End: Original strand, 21842807 - 21842939
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| |||||||||||  | || ||||||||| |||| | ||| |||||||| |||||||| ||||| || ||||||||||||||||||||||| |    
T  21842807 ccattctcgaacttgatgcatctcgagaactcagcattctcagcagtatagtgcgggtaaaacttcgccaactcaacaaacttggcagcatactcagtca 21842906  T
Q  432 cagacatgtatccttgcttcagctcaaggaatt 464  Q
    ||||||||| ||||||||||| |||||||||||    
T  21842907 cagacatgtttccttgcttcaactcaaggaatt 21842939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 332 - 464
Target Start/End: Original strand, 22400915 - 22401047
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| ||| ||||||| || || ||||||||| |||| | ||| |||||||| |||||||| ||||| || ||||||||||||||||||||||| |    
T  22400915 ccattctcgaacctgatgcatttcgagaactcagcattctcagtagtatagtgcgggtaaaacttcgccaactcaacaaacttggcagcatactcagtca 22401014  T
Q  432 cagacatgtatccttgcttcagctcaaggaatt 464  Q
    ||||||||| ||||||||||| |||||||||||    
T  22401015 cagacatgtttccttgcttcaactcaaggaatt 22401047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 303 - 462
Target Start/End: Complemental strand, 21044944 - 21044785
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||| | |||||| |||||||  || ||||||||||| ||||||||||| ||||||||||||||||  | ||||||||||||||||||||| || |     
T  21044944 caattgctcgcttgatctcagcacgcaagccattctcaaatttgatgcacttagaaaactcagcagtcttggcagtgtagtgcggataaaacttagctag 21044845  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     ||||||||||| |||||||| ||| | || ||||| | ||||||||||| |||||||||    
T  21044844 ctccacaaactttgcagcatattcaatcactgacatatttccttgcttcacctcaaggaa 21044785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 16379663 - 16379822
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||||||| || |||| ||  || |||||||| || ||||| ||||| |||||||||||||||||   ||| ||||| |||||||| || |||||    
T  16379663 caattgccctcttcatatcaggacacaagccattctcgaatttgatacacttggaaaactcagcagtctcaacagtatagtgtggataaaatttagccaa 16379762  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     ||||||||||| |||||||||||||| |  |||||||  ||||| ||||||||||||||    
T  16379763 ctccacaaacttagcagcatactcagtcatcgacatgttcccttgtttcagctcaaggaa 16379822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 21176965 - 21177095
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    ||||||||||| |||||||| || |||||||||  |||||| | ||  |||||  |||| ||||||||||| ||||| ||||||||||||||||| || |    
T  21176965 ccattctcaaatttgatgcatttagaaaactcaatagtctcagcagcatagtgtagatagaactttgccaactccacgaacttggcagcatactcggtca 21177064  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||| ||||||||| |||||||||||    
T  21177065 cagacatgtttccttgctttagctcaaggaa 21177095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 332 - 426
Target Start/End: Complemental strand, 21228317 - 21228223
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactc 426  Q
    |||||||| ||||||||||| || || |||||||||||||| | ||| |||||||| || ||||||||||| |||||||||||||||||||||||    
T  21228317 ccattctcgaacttgatgcatttcgagaactcagcagtctcagcagtatagtgcgggtagaactttgccaactccacaaacttggcagcatactc 21228223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 335 - 464
Target Start/End: Complemental strand, 16347355 - 16347226
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||||| ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || || |    
T  16347355 ttctcgaacttgatgcatctcgagaactcagcattctctgcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacgg 16347256  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | |||||||||||||||||||||||    
T  16347255 acatatttccttgcttcagctcaaggaatt 16347226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 335 - 464
Target Start/End: Complemental strand, 16354004 - 16353875
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||||| ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || || |    
T  16354004 ttctcgaacttgatgcatctcgagaactcagcattctctgcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacgg 16353905  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | |||||||||||||||||||||||    
T  16353904 acatatttccttgcttcagctcaaggaatt 16353875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 335 - 464
Target Start/End: Complemental strand, 51330253 - 51330124
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||||| ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || || |    
T  51330253 ttctcgaacttgatgcatctcgagaactcagcattctctgcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacgg 51330154  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | |||||||||||||||||||||||    
T  51330153 acatatttccttgcttcagctcaaggaatt 51330124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 332 - 459
Target Start/End: Original strand, 18273396 - 18273523
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    ||||| |||||||| ||||||||||| |||||||||||||| | ||| || || |||||||| ||||| |  ||||||||||| |||||||||||||| |    
T  18273396 ccattttcaaacttaatgcactttgagaactcagcagtctcagcagtataatgtggataaaattttgcaagctccacaaacttagcagcatactcagtta 18273495  T
Q  432 cagacatgtatccttgcttcagctcaag 459  Q
    | ||||| | |||||| ||||| |||||    
T  18273496 ccgacatatctccttgtttcagttcaag 18273523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 311 - 456
Target Start/End: Original strand, 19857882 - 19858027
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| |  || ||||||||||||||||| ||||| || |||||||| ||||| | ||| ||||| || || ||||| || | ||||||||    
T  19857882 ctcttgatgtcagctctcaagccattctcaaacttgatacacttggagaactcagctgtctccgcagtatagtgggggtagaacttagcaacttccacaa 19857981  T
Q  411 acttggcagcatactcagtaacagacatgtatccttgcttcagctc 456  Q
    |||| |||||||| || ||||||||||| |  || |||||||||||    
T  19857982 acttcgcagcatattctgtaacagacatatccccctgcttcagctc 19858027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 303 - 464
Target Start/End: Original strand, 20922008 - 20922169
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||| |||||| |||||||  || ||| | ||||| ||||||||||| |||||||| ||  |||| | ||||||||||||||||||||| ||||     
T  20922008 caattgcccgcttgatctcagcacgcaagccactttcaaatttgatgcacttggaaaactcggcgttctcagcagtgtagtgcggataaaacttagccag 20922107  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaatt 464  Q
     |||| |||||| |||||||| || |  || |||||||  || ||||||| ||| |||||||    
T  20922108 ctccataaactttgcagcatagtcggacactgacatgtcaccctgcttcaactccaggaatt 20922169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 303 - 438
Target Start/End: Complemental strand, 21742342 - 21742207
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||| ||||||||||| ||||| |  |  ||||| |||||||||||||| || || |||||||| ||||| | ||| ||||| |||||||| ||||| |     
T  21742342 caatagccctcttgatatcagctctcaggccattttcaaacttgatgcatttagagaactcagctgtctccgtagtatagtgtggataaaattttgcaag 21742243  T
Q  403 ttccacaaacttggcagcatactcagtaacagacat 438  Q
     ||||||||||| |||||||||||||| || |||||    
T  21742242 ctccacaaacttagcagcatactcagttaccgacat 21742207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 303 - 456
Target Start/End: Complemental strand, 20832691 - 20832538
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||| ||||||||||| ||||| |  |  ||||||||||||||||| ||||| || |||||||| ||||| | ||| || || || || ||||| || |     
T  20832691 caatagccctcttgatgtcagctctcaggccattctcaaacttgatacacttggagaactcagctgtctccgcagtataatgagggtagaacttagcaag 20832592  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctc 456  Q
    |||||||||||| ||| ||||||| || ||||||||||  || |||||||||||    
T  20832591 ttccacaaacttagcaacatactctgtgacagacatgtcaccctgcttcagctc 20832538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 303 - 440
Target Start/End: Complemental strand, 21738826 - 21738689
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||| ||||||||||| ||| | |  || ||||| |||||||| || || || || |||||||||||||| | ||| ||||| ||||| ||||| || |     
T  21738826 caatagccctcttgatatcaactctcaaaccattttcaaactttatacatttggagaactcagcagtctccgcagtatagtgaggatagaacttagcgag 21738727  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgt 440  Q
    |||||||||||| ||||||||||| || ||||||||||    
T  21738726 ttccacaaacttcgcagcatactccgtcacagacatgt 21738689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 359 - 464
Target Start/End: Complemental strand, 33387766 - 33387661
Alignment:
Q  359 aactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaa 458  Q
    ||||||||| |||| | ||| |||||||| || ||||||| ||  ||||| ||||||||||||||||| || || ||||| | |||||||||||||| ||    
T  33387766 aactcagcattctcagcagtatagtgcgggtagaactttgacagctccacgaacttggcagcatactctgtcacggacatatttccttgcttcagctaaa 33387667  T
Q  459 ggaatt 464  Q
    ||||||    
T  33387666 ggaatt 33387661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 462
Target Start/End: Original strand, 21833900 - 21834027
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||| | ||| |||||||| || ||||| |  |  ||||| ||||||||||||||||| || || |    
T  21833900 ttctcgaacttgatgcatctcgagaactcagcattctcagcagtatagtgcgggtagaacttcgatagctccacgaacttggcagcatactctgtcacgg 21833999  T
Q  435 acatgtatccttgcttcagctcaaggaa 462  Q
    |||| | |||||||||||||||||||||    
T  21834000 acatatttccttgcttcagctcaaggaa 21834027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 440
Target Start/End: Complemental strand, 20853494 - 20853413
Alignment:
Q  359 aactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacagacatgt 440  Q
    |||||||| ||||| | ||||||||| |||||||||||||| | ||||   ||||||||||||||||| || ||||||||||    
T  20853494 aactcagctgtctccgcagtgtagtgaggataaaactttgcaagttccgtgaacttggcagcatactctgtgacagacatgt 20853413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 464
Target Start/End: Complemental strand, 41350406 - 41350301
Alignment:
Q  359 aactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaa 458  Q
    ||||||| | |||| | ||| |||||||| || ||||| | ||  ||||| ||||||||||||||||| || || ||||| | |||||||||||||||||    
T  41350406 aactcagaattctcagcagtatagtgcgggtagaacttcgacagctccacgaacttggcagcatactctgtcacggacatatttccttgcttcagctcaa 41350307  T
Q  459 ggaatt 464  Q
    ||||||    
T  41350306 ggaatt 41350301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 22496046 - 22496001
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgat 348  Q
    |||||||||||||||| ||||||| |||||| ||||||||||||||    
T  22496046 caattgccctcttgatctcagcacgtaacccgttctcaaacttgat 22496001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 440
Target Start/End: Complemental strand, 20074473 - 20074362
Alignment:
Q  329 aacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcag 428  Q
    |||||||||||||| ||||| ||||| || |||||||| ||||| | | |||| || || || ||| | || | |||||||||||| ||||||||||| |    
T  20074473 aacccattctcaaatttgatacacttggagaactcagctgtctccgcactgtaatgagggtagaacgtagcaagttccacaaactttgcagcatactccg 20074374  T
Q  429 taacagacatgt 440  Q
    | || |||||||    
T  20074373 tgacggacatgt 20074362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 438
Target Start/End: Complemental strand, 38909590 - 38909481
Alignment:
Q  329 aacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcag 428  Q
    |||||||||||||| ||||| ||||| || |||||||| |||||   | | ||||| || || ||||| || | |||||||||| | ||||||||||| |    
T  38909590 aacccattctcaaatttgatacacttagagaactcagctgtctccacactatagtgagggtagaacttggcaagttccacaaacctagcagcatactccg 38909491  T
Q  429 taacagacat 438  Q
    |||| |||||    
T  38909490 taacggacat 38909481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 332 - 440
Target Start/End: Complemental strand, 16670669 - 16670561
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    ||||| || ||||||||||| || || |||||||  ||||| | ||||||||| || ||||||||||| | ||||   |||||||| |||||||| || |    
T  16670669 ccattttcgaacttgatgcatttggagaactcagttgtctccgcagtgtagtgagggtaaaactttgcaagttccgtgaacttggctgcatactccgtga 16670570  T
Q  432 cagacatgt 440  Q
    | |||||||    
T  16670569 ccgacatgt 16670561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 423
Target Start/End: Complemental strand, 22015535 - 22015415
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||| ||||||||||| ||||| |  |  |||||||||||||| || || || || |||||||| ||||| | ||| ||||| ||||| || || || |     
T  22015535 caatagccctcttgatatcagctctcattccattctcaaacttaatacatttggagaactcagctgtctccgcagtatagtgaggatagaatttagcaag 22015436  T
Q  403 ttccacaaacttggcagcata 423  Q
    |||||||||||| ||||||||    
T  22015435 ttccacaaacttagcagcata 22015415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 103; Significance: 5e-51; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 328 - 462
Target Start/End: Complemental strand, 6698 - 6564
Alignment:
Q  328 taacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactca 427  Q
    |||||| |||||||||||||| ||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6698 taacccgttctcaaacttgatacacttcgaaaactcagcagtctctagaatgtagtgcggataaaactttgccaattccacaaacttggcagcatactca 6599  T
Q  428 gtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    || || ||||||| |||||||||||||||||||||    
T  6598 gtcaccgacatgtttccttgcttcagctcaaggaa 6564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 98; Significance: 4e-48; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 303 - 464
Target Start/End: Complemental strand, 110628 - 110467
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||| ||||| || |||||||  || |||||||| || ||||| ||||||||||||||||| ||||||| ||||||||||||||||||||| |||||    
T  110628 caattgctctcttaatctcagcacgcaaaccattctcgaatttgatacactttgaaaactcagctgtctctgcagtgtagtgcggataaaacttagccaa 110529  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaatt 464  Q
    |||||||||||||||||||||||| || || ||||||| |||||||||||||||||||||||    
T  110528 ttccacaaacttggcagcatactctgtcactgacatgtttccttgcttcagctcaaggaatt 110467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 303 - 459
Target Start/End: Original strand, 18428 - 18584
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||| |||||| |||||||  || ||||||||||  ||||||||||| || |||||||||||| | | ||||||||||||||||||||| ||||     
T  18428 caattgcccgcttgatctcagcacgcaagccattctcaactttgatgcacttggagaactcagcagtcacagcagtgtagtgcggataaaacttagccag 18527  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaag 459  Q
     ||||||||||| |||||||||||||| || ||||| |  |||||||| ||||||||    
T  18528 ctccacaaactttgcagcatactcagtcactgacatattaccttgctttagctcaag 18584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 96; Significance: 7e-47; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 303 - 462
Target Start/End: Complemental strand, 16244 - 16085
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||| ||||| || ||||| |  || ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  16244 caattgctctcttaatctcagctcgcaaaccattctcaaacttgatacactttgaaaactcagcagtctctgcagtgtagtgcggataaaactttgccaa 16145  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    |||||| |||||||||||||| ||  |||| ||| ||| |||||||||||||||||||||    
T  16144 ttccacgaacttggcagcatattctataactgacgtgtttccttgcttcagctcaaggaa 16085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 96; Significance: 7e-47; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 303 - 462
Target Start/End: Complemental strand, 36541 - 36382
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||||||||||||||| ||||| |  || |||||||| |||||||| |||||| |||||||||||||||||| || ||| ||||||||||||||||||||    
T  36541 caattgccctcttgatctcagcccgcaatccattctcgaacttgatacacttttaaaactcagcagtctctgcagcgtaatgcggataaaactttgccaa 36442  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     || ||||||||||||||||||||||| || ||||||| |||||||||||||||||||||    
T  36441 ctctacaaacttggcagcatactcagttacggacatgtttccttgcttcagctcaaggaa 36382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 303 - 459
Target Start/End: Original strand, 26935 - 27091
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||| ||||||||||| ||| |||  || ||||||||||| ||||||||||| || |||||||||||||  | ||||||||||||||||||||| ||||     
T  26935 caatggccctcttgatctcaacacgcaagccattctcaaatttgatgcacttggagaactcagcagtcttagtagtgtagtgcggataaaacttagccag 27034  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaag 459  Q
     || |||||||| ||||||||||| || ||  ||||||  || ||||||||||||||    
T  27035 ctcaacaaactttgcagcatactctgtcactaacatgtcaccctgcttcagctcaag 27091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 30870 - 31029
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||| ||||| ||||| ||||| |  || |||||||| |||||||| ||||| ||||| ||||||||||||| |||||| ||||||||||||||||||||    
T  30870 caatcgcccttttgatctcagcccgcaatccattctcgaacttgatacacttcgaaaaatcagcagtctctgcagtgtaatgcggataaaactttgccaa 30969  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     |||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  30970 ctccacaaatttggcagcatactcagtcacagacatgtttccttgcttcagctcaaggaa 31029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 2e-44; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 15066244 - 15066403
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||||||| || ||||  |  || |||||||| ||||||||||||||||| |||||||||||||| | || ||| ||||||||||||||||||||    
T  15066244 caattgccctctttatatcaggccgcaatccattctcgaacttgatgcactttgagaactcagcagtctcagcagcgtaatgcggataaaactttgccaa 15066343  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     |||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||    
T  15066344 ctccacaaacttggcagcatactcagttacggacatgtttccttgcttcagctcaaggaa 15066403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 17497864 - 17498023
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||| ||||| || |||||||  || || |||||||| ||||| |||||| ||||||| |||||||||||||||||||| |||||||||||||||||    
T  17497864 caattgctctctttatctcagcacgcaaaccgttctcaaatttgatacactttaaaaactcggcagtctctggagtgtagtgtggataaaactttgccaa 17497963  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||||||||||||||||| ||| ||  |||||| |||||||||||||||||||||    
T  17497964 ttccacaaacttggcagcatacttagtcacgaacatgtttccttgcttcagctcaaggaa 17498023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 303 - 462
Target Start/End: Complemental strand, 14873542 - 14873383
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||||||||||||||| ||||| |  || |||||||| |||||||| ||||| |||||||||| |||||||| || ||| ||||||||||| ||||||||    
T  14873542 caattgccctcttgatctcagccctcaatccattctcgaacttgatacacttcgaaaactcagtagtctctgcagcgtaatgcggataaaattttgccaa 14873443  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     ||||||||||||| |||||||||||| || ||||||| |||||||||||||||||||||    
T  14873442 ctccacaaacttggaagcatactcagtcactgacatgtttccttgcttcagctcaaggaa 14873383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 19727932 - 19728091
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||| |||||| |||||||  || ||||||||||| ||||||||||| || ||||||||||||||   |||||||||||| |||||||| ||||     
T  19727932 caattgcccgcttgatctcagcacgcaagccattctcaaatttgatgcacttggagaactcagcagtctcgacagtgtagtgcgggtaaaacttagccag 19728031  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     |||||||| || |||||||||||||| || ||||| | |||||||||||||||||||||    
T  19728032 ctccacaaattttgcagcatactcagttactgacatatttccttgcttcagctcaaggaa 19728091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 12502146 - 12502276
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| ||||||||||| ||||| ||||| |||||||| | ||| || || ||||||||||||||||| || ||||||||||||||||||||||| |    
T  12502146 ccattctcgaacttgatgcattttgagaactctgcagtctcagcagtataatgtggataaaactttgccaactcgacaaacttggcagcatactcagtta 12502245  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    | ||||||| |||||||||||||||||||||    
T  12502246 cggacatgtttccttgcttcagctcaaggaa 12502276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 303 - 462
Target Start/End: Complemental strand, 15459379 - 15459224
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||| |||||||| ||||||| ||| || ||||| || |||||||| || |    |||||||||||||| ||| || |||||||||||| |||||||    
T  15459379 caattgctctcttgatctcagcacgtaaaccgttctcgaatttgatgcatttcg----ctcagcagtctctgcagtataatgcggataaaaccttgccaa 15459284  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     |||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||    
T  15459283 ctccacaaacttggcagcatactcagtcacagacatgtttccttgcttcaactcaaggaa 15459224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 304 - 426
Target Start/End: Complemental strand, 23078973 - 23078851
Alignment:
Q  304 aattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaat 403  Q
    |||||||||||| || ||||||| |||||| |||||||||||||||||||||||||||||||||||||| | |   || ||||||||||||||||||||     
T  23078973 aattgccctcttaatctcagcacgtaacccgttctcaaacttgatgcactttgaaaactcagcagtctcagcaacataatgcggataaaactttgccaac 23078874  T
Q  404 tccacaaacttggcagcatactc 426  Q
    ||||||||||||||||| |||||    
T  23078873 tccacaaacttggcagcgtactc 23078851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 332 - 464
Target Start/End: Original strand, 15359251 - 15359383
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| |||||||||||  | || ||||||||| |||| | ||| |||||||| |||||||| ||||| || ||||||||||||||||||||||| |    
T  15359251 ccattctcgaacttgatgcatctcgagaactcagcattctcagcagtatagtgcgggtaaaacttcgccaactcaacaaacttggcagcatactcagtca 15359350  T
Q  432 cagacatgtatccttgcttcagctcaaggaatt 464  Q
    ||||||||| ||||||||||| |||||||||||    
T  15359351 cagacatgtttccttgcttcaactcaaggaatt 15359383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 15262803 - 15262953
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||| | |||||| |||||||  || ||||||||||| |||||||| |||||||||||||||||         |||||||||||||||| | |||||    
T  15262803 caattgctcgcttgatctcagcacgcaagccattctcaaatttgatgcattttgaaaactcagcagt---------gtagtgcggataaaacatagccaa 15262893  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||||||||||||||| ||||| || ||||| | |||||||||||||||||||||    
T  15262894 ttccacaaacttggcagcatattcagtcactgacatatttccttgcttcagctcaaggaa 15262953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 15263615 - 15263765
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||| | |||||| |||||||  || ||||||||||| |||||||| |||||||||||||||||         |||||||||||||||| | |||||    
T  15263615 caattgctcgcttgatctcagcacgcaagccattctcaaatttgatgcattttgaaaactcagcagt---------gtagtgcggataaaacatagccaa 15263705  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||||||||||||||| ||||| || ||||| | |||||||||||||||||||||    
T  15263706 ttccacaaacttggcagcatattcagtcactgacatatttccttgcttcagctcaaggaa 15263765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 11861555 - 11861685
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| | |||||| ||||| ||||||||||||||||| | ||  || |||||||| ||||||||||| || ||||||||||||||||||| ||| |    
T  11861555 ccattctcgagcttgatacacttcgaaaactcagcagtctcagcagcataatgcggatagaactttgccaactcaacaaacttggcagcatacttagtca 11861654  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    |||||| || |||||||||||||||||||||    
T  11861655 cagacaggtttccttgcttcagctcaaggaa 11861685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 303 - 462
Target Start/End: Complemental strand, 12843060 - 12842909
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||| |||||| |||||||  || ||||||||||| ||||| ||||| ||||| ||||| |        || |||||||||||||||||||||||    
T  12843060 caattgcccgcttgatctcagcacgcaagccattctcaaatttgatacacttagaaaattcagcgg--------gtatagtgcggataaaactttgccaa 12842969  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     ||||||||||||||||||||||| || || ||||||| |||||||||||||||||||||    
T  12842968 ctccacaaacttggcagcatactctgttactgacatgtttccttgcttcagctcaaggaa 12842909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 23414718 - 23414588
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| ||||||||||| || || |||||||||||||| | ||  ||||||||||| ||||||||||| |||||||| |||||||||||||| || |    
T  23414718 ccattctcgaacttgatgcatttcgagaactcagcagtctcagcagcatagtgcggatagaactttgccaactccacaaatttggcagcatactctgtca 23414619  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    |||||||||  ||||| ||||||||||||||    
T  23414618 cagacatgttcccttgtttcagctcaaggaa 23414588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 24186389 - 24186519
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| ||||||||||| || ||||||||||||||||||| ||  || |||||||||||||| ||||| || ||||||||||||||||||||||| |    
T  24186389 ccattctcgaacttgatgcatttggaaaactcagcagtctctgcagcataatgcggataaaacttcgccaactcaacaaacttggcagcatactcagtca 24186488  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    | ||||| | ||||||||||| || ||||||    
T  24186489 cggacatatttccttgcttcaactaaaggaa 24186519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 303 - 459
Target Start/End: Complemental strand, 13028303 - 13028147
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||| |||||| || ||||  || ||||||||||| ||||||||||| ||||| ||||||||||| | ||||||||| ||||||||||| ||||     
T  13028303 caattgcccgcttgatctccgcacgcaaaccattctcaaatttgatgcacttagaaaattcagcagtctcagcagtgtagtgtggataaaacttagccag 13028204  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaag 459  Q
     ||||||||||| ||||||||||  || |||||||| |  ||||| |||||||||||    
T  13028203 ctccacaaactttgcagcatactttgtcacagacatatcgccttgtttcagctcaag 13028147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 332 - 464
Target Start/End: Complemental strand, 16803875 - 16803743
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| ||||||||||| || || |||||| ||||||| | ||  |||||||| || |||| |||||| ||||||||||||||||||||||| || |    
T  16803875 ccattctcgaacttgatgcatttcgagaactcaacagtctcagcagcatagtgcgggtagaactctgccaactccacaaacttggcagcatactctgtca 16803776  T
Q  432 cagacatgtatccttgcttcagctcaaggaatt 464  Q
    || |||||| |||||||||||||||||||||||    
T  16803775 catacatgtttccttgcttcagctcaaggaatt 16803743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 303 - 459
Target Start/End: Complemental strand, 12508511 - 12508355
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||| ||||||||||| |||||||  || ||||||||||| ||||||||||| || |||||||||||||| | ||||||||| ||||||||||| ||||     
T  12508511 caatggccctcttgatctcagcacgcaagccattctcaaatttgatgcacttggagaactcagcagtctcagcagtgtagtgtggataaaacttagccag 12508412  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaag 459  Q
     || |||||| | || |||||||| || || |||||||  || ||||||||||||||    
T  12508411 ctctacaaaccttgccgcatactcggtcactgacatgtcaccctgcttcagctcaag 12508355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 332 - 464
Target Start/End: Complemental strand, 53381950 - 53381818
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| |||||||| ||  | || ||||||||| |||| | ||| ||||||||||| ||||||| || |||||| ||||||||||||||||| || |    
T  53381950 ccattctcgaacttgatacatctcgagaactcagcactctcagcagtatagtgcggatagaactttgacagttccacgaacttggcagcatactctgtca 53381851  T
Q  432 cagacatgtatccttgcttcagctcaaggaatt 464  Q
    ||||||| | |||||||||||||||||||||||    
T  53381850 cagacatatttccttgcttcagctcaaggaatt 53381818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 16695366 - 16695496
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| ||||| ||||| || || |||||| |||| |  | |||||||||||| || ||||||||||| ||||||||| |||||||||||||||| |    
T  16695366 ccattctcgaacttaatgcatttcgagaactcatcagttttagcagtgtagtgcgggtagaactttgccaactccacaaacatggcagcatactcagtta 16695465  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    || |||| | |||||||||||||||||||||    
T  16695466 caaacatatttccttgcttcagctcaaggaa 16695496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 335 - 464
Target Start/End: Original strand, 10008802 - 10008931
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||||| ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || || |    
T  10008802 ttctcgaacttgatgcatctcgagaactcagcattctctgcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacgg 10008901  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||||| |||||||||||||||||||||||    
T  10008902 acatgtttccttgcttcagctcaaggaatt 10008931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 335 - 464
Target Start/End: Original strand, 10909412 - 10909541
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||||| ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || || |    
T  10909412 ttctcgaacttgatgcatctcgagaactcagcattctctgcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacgg 10909511  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||||| |||||||||||||||||||||||    
T  10909512 acatgtttccttgcttcagctcaaggaatt 10909541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 303 - 460
Target Start/End: Complemental strand, 14578378 - 14578221
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||| |||||||| |||||||  || |||||||| |||||||||||  | || ||||||||| |||| |  |||||||| ||||||||||| |||||    
T  14578378 caattgctctcttgatctcagcacgcaaaccattctcgaacttgatgcatctcgagaactcagcattctcagcggtgtagtgtggataaaacttagccaa 14578279  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaagg 460  Q
     |||| |||||||||||||||||| || || ||||| |  |||||||| |||||||||    
T  14578278 ctccataaacttggcagcatactctgtcaccgacatattcccttgctttagctcaagg 14578221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 335 - 464
Target Start/End: Complemental strand, 15586320 - 15586191
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||||| ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || ||||    
T  15586320 ttctcgaacttgatgcatctcgagaactcagcattctctgcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacag 15586221  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | |||||||||||||||||||||||    
T  15586220 acatatttccttgcttcagctcaaggaatt 15586191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 335 - 464
Target Start/End: Original strand, 48428649 - 48428778
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||||| ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || ||||    
T  48428649 ttctcgaacttgatgcatctcgagaactcagcattctctgcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacag 48428748  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | |||||||||||||||||||||||    
T  48428749 acatatttccttgcttcagctcaaggaatt 48428778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 332 - 464
Target Start/End: Original strand, 12889908 - 12890040
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| |||||||||||  | || ||||||||| |||||| ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || |    
T  12889908 ccattctcgaacttgatgcatctcgagaactcagcattctctgcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtca 12890007  T
Q  432 cagacatgtatccttgcttcagctcaaggaatt 464  Q
    | ||||| | |||||||||||||||||||||||    
T  12890008 cggacatatttccttgcttcagctcaaggaatt 12890040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 332 - 464
Target Start/End: Complemental strand, 15399449 - 15399317
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| ||||||| |||  | || ||||||||| |||  | ||| |||||||| |||||||| ||||| || ||||||||||||||||||||||| |    
T  15399449 ccattctcgaacttgacgcatctcgagaactcagcattcttagcagtatagtgcgggtaaaacttcgccaactcaacaaacttggcagcatactcagtca 15399350  T
Q  432 cagacatgtatccttgcttcagctcaaggaatt 464  Q
    || |||||| ||||||||||| |||||||||||    
T  15399349 caaacatgtttccttgcttcaactcaaggaatt 15399317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 335 - 464
Target Start/End: Original strand, 16638975 - 16639104
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||||| ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || || |    
T  16638975 ttctcgaacttgatgcatctcgagaactcagcattctctgcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacgg 16639074  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | |||||||||||||||||||||||    
T  16639075 acatatttccttgcttcagctcaaggaatt 16639104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 335 - 464
Target Start/End: Original strand, 43165877 - 43166006
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||||| ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || || |    
T  43165877 ttctcgaacttgatgcatctcgagaactcagcattctctgcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacgg 43165976  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | |||||||||||||||||||||||    
T  43165977 acatatttccttgcttcagctcaaggaatt 43166006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 335 - 464
Target Start/End: Original strand, 3689145 - 3689274
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||||| ||| ||||| ||||| ||||| | ||  ||||| ||||||||||||||||| || || |    
T  3689145 ttctcgaacttgatgcatctcgagaactcagcattctctgcagtatagtgtggatagaacttagacagctccacgaacttggcagcatactctgtcacgg 3689244  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | |||||||||||||||||||||||    
T  3689245 acatatttccttgcttcagctcaaggaatt 3689274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 335 - 464
Target Start/End: Complemental strand, 5108467 - 5108338
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||| | ||| |||||||| || ||||| | ||  ||||| ||||||||||||||||| || ||||    
T  5108467 ttctcgaacttgatgcatctcgagaactcagcattctcagcagtatagtgcgggtagaacttcgacagctccacgaacttggcagcatactctgtcacag 5108368  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | |||||||||||||||||||||||    
T  5108367 acatatttccttgcttcagctcaaggaatt 5108338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 335 - 464
Target Start/End: Complemental strand, 5110337 - 5110208
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||| | ||| |||||||| || ||||| | ||  ||||| ||||||||||||||||| || ||||    
T  5110337 ttctcgaacttgatgcatctcgagaactcagcattctcagcagtatagtgcgggtagaacttcgacagctccacgaacttggcagcatactctgtcacag 5110238  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | |||||||||||||||||||||||    
T  5110237 acatatttccttgcttcagctcaaggaatt 5110208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 335 - 464
Target Start/End: Original strand, 13255892 - 13256021
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||||| ||| ||||||||||| ||||| | ||  ||||| ||||||||||||| ||| || || |    
T  13255892 ttctcgaacttgatgcatctcgagaactcagcattctctgcagtatagtgcggatagaacttagacagctccacgaacttggcagcatgctctgtcacgg 13255991  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | |||||||||||||||||||||||    
T  13255992 acatatttccttgcttcagctcaaggaatt 13256021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 335 - 464
Target Start/End: Complemental strand, 20058982 - 20058853
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||| | ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || || |    
T  20058982 ttctcgaacttgatgcatctcgagaactcagcattctcagcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacgg 20058883  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | |||||||||||||||||||||||    
T  20058882 acatatttccttgcttcagctcaaggaatt 20058853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 335 - 464
Target Start/End: Complemental strand, 26790341 - 26790212
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||| | |||||| ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || || |    
T  26790341 ttctcgaacttgatgcatctcgagaactcagtattctctgcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacgg 26790242  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||| | |||||||||||||||||||||||    
T  26790241 acatatttccttgcttcagctcaaggaatt 26790212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 332 - 464
Target Start/End: Original strand, 6597254 - 6597386
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| |||||||| ||  | || ||||||||| |||| | ||| |||||||| || ||||| | ||  ||||| ||||||||||||||||| || |    
T  6597254 ccattctcgaacttgatacatctcgagaactcagcattctcagcagtatagtgcgggtagaacttcgacagctccacgaacttggcagcatactctgtca 6597353  T
Q  432 cagacatgtatccttgcttcagctcaaggaatt 464  Q
    ||||||| | |||||||||||||||||||||||    
T  6597354 cagacatatttccttgcttcagctcaaggaatt 6597386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 332 - 464
Target Start/End: Original strand, 6603934 - 6604066
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| |||||||| ||  | || ||||||||| |||| | ||| |||||||| || ||||| | ||  ||||| ||||||||||||||||| || |    
T  6603934 ccattctcgaacttgatacatctcgagaactcagcattctcagcagtatagtgcgggtagaacttcgacagctccacgaacttggcagcatactctgtca 6604033  T
Q  432 cagacatgtatccttgcttcagctcaaggaatt 464  Q
    ||||||| | |||||||||||||||||||||||    
T  6604034 cagacatatttccttgcttcagctcaaggaatt 6604066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 332 - 464
Target Start/End: Complemental strand, 16753632 - 16753500
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| |||||||| ||  | || ||||||||| |||| | ||| |||||||| || ||||| | ||  ||||| ||||||||||||||||| || |    
T  16753632 ccattctcgaacttgatacatctcgagaactcagcattctcagcagtatagtgcgggtagaacttcgacagctccacgaacttggcagcatactctgtca 16753533  T
Q  432 cagacatgtatccttgcttcagctcaaggaatt 464  Q
    ||||||| | |||||||||||||||||||||||    
T  16753532 cagacatatttccttgcttcagctcaaggaatt 16753500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 335 - 462
Target Start/End: Complemental strand, 15712984 - 15712857
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||| | ||| |||||||| || ||||||| ||  ||||| ||| ||||||||||||| || ||||    
T  15712984 ttctcgaacttgatgcatctcgagaactcagcattctcagcagtatagtgcgggtagaactttgacagctccacgaacatggcagcatactctgtcacag 15712885  T
Q  435 acatgtatccttgcttcagctcaaggaa 462  Q
    |||||| ||||||||||| |||||||||    
T  15712884 acatgtttccttgcttcaactcaaggaa 15712857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 359 - 464
Target Start/End: Complemental strand, 15345149 - 15345044
Alignment:
Q  359 aactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaa 458  Q
    ||||||||| |||| | ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || || ||||| | |||||||||||||||||    
T  15345149 aactcagcattctcagcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacggacatatttccttgcttcagctcaa 15345050  T
Q  459 ggaatt 464  Q
    ||||||    
T  15345049 ggaatt 15345044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 332 - 464
Target Start/End: Complemental strand, 5421861 - 5421729
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| |||||||| ||  | || ||||||||| |||| | ||| |||||||| || ||||| | ||  ||||| ||||||||||||||||| || |    
T  5421861 ccattctcgaacttgatacatctcgagaactcagcattctcagcagtatagtgcgggtagaacttcgacagctccacgaacttggcagcatactcggtca 5421762  T
Q  432 cagacatgtatccttgcttcagctcaaggaatt 464  Q
     |||||| | |||||||||||||||||||||||    
T  5421761 tagacatatttccttgcttcagctcaaggaatt 5421729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 303 - 459
Target Start/End: Original strand, 35983364 - 35983520
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||| ||||||||||| ||||| |  |  ||||| |||||||||||||| || || |||||||| ||||| | ||| ||||| |||||||| ||||| |     
T  35983364 caatagccctcttgatatcagctctcaggccattttcaaacttgatgcatttggagaactcagctgtctccgcagtatagtgtggataaaattttgcaag 35983463  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaag 459  Q
     ||||||||||| |||||||||||||| || ||||| |  ||||| ||||| |||||    
T  35983464 ctccacaaacttagcagcatactcagttaccgacatatcaccttgtttcagttcaag 35983520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 333 - 464
Target Start/End: Complemental strand, 13317485 - 13317354
Alignment:
Q  333 cattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaac 432  Q
    |||| ||||||||||| || || ||||||||| | ||||| | ||| ||||| || ||||| ||||| | |||||||||||| ||||||||||| || ||    
T  13317485 cattttcaaacttgatacatttggaaaactcaactgtctccgcagtatagtgagggtaaaattttgcaagttccacaaacttagcagcatactctgtgac 13317386  T
Q  433 agacatgtatccttgcttcagctcaaggaatt 464  Q
    ||||||||  || ||||||| ||| |||||||    
T  13317385 agacatgtcaccctgcttcaactccaggaatt 13317354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 303 - 438
Target Start/End: Complemental strand, 14290478 - 14290343
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||| ||||||||||| ||||| |  |  ||||| |||||||||||||| || || |||||||| ||||| | ||||||||| ||||| || ||||| |     
T  14290478 caatagccctcttgatatcagctctcaggccattttcaaacttgatgcatttggagaactcagctgtctccgcagtgtagtgtggatagaattttgcaag 14290379  T
Q  403 ttccacaaacttggcagcatactcagtaacagacat 438  Q
     ||||||||||| |||||||||||||| || |||||    
T  14290378 ctccacaaacttagcagcatactcagttaccgacat 14290343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 332 - 438
Target Start/End: Original strand, 12181556 - 12181662
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    ||||||||||||||||| || || || |||||||| ||||| | ||| ||||| || || ||||| || | |||||||||||| ||||||||||| ||||    
T  12181556 ccattctcaaacttgatacatttggagaactcagctgtctccgcagtatagtgagggtagaacttagcaagttccacaaactttgcagcatactctgtaa 12181655  T
Q  432 cagacat 438  Q
    |||||||    
T  12181656 cagacat 12181662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 305 - 423
Target Start/End: Original strand, 17739067 - 17739185
Alignment:
Q  305 attgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaatt 404  Q
    ||||||| |||||| |||||||  || ||| | ||||| ||||||||||| |||||||||||  |||| | |||||||||| |||||||||| ||||  |    
T  17739067 attgcccgcttgatctcagcacgcaagccactttcaaatttgatgcacttggaaaactcagcgttctcagcagtgtagtgcagataaaacttagccagct 17739166  T
Q  405 ccacaaacttggcagcata 423  Q
    ||| |||||| ||||||||    
T  17739167 ccataaactttgcagcata 17739185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 305 - 423
Target Start/End: Original strand, 19040387 - 19040505
Alignment:
Q  305 attgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaatt 404  Q
    ||||||| |||||| |||||||  || ||| | ||||| ||||||||||| |||||||||||  |||| | |||||||||| |||||||||| ||||  |    
T  19040387 attgcccgcttgatctcagcacgcaagccactttcaaatttgatgcacttggaaaactcagcgttctcagcagtgtagtgcagataaaacttagccagct 19040486  T
Q  405 ccacaaacttggcagcata 423  Q
    ||| |||||| ||||||||    
T  19040487 ccataaactttgcagcata 19040505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 329 - 438
Target Start/End: Complemental strand, 2036832 - 2036723
Alignment:
Q  329 aacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcag 428  Q
    ||||||||||||||||| |||||||| || ||||| || ||||||| | |||| || || || ||||| || | |||||||||||| ||||||||||| |    
T  2036832 aacccattctcaaacttaatgcacttggagaactccgctgtctctgcactgtaatgagggtagaacttagcaagttccacaaacttagcagcatactccg 2036733  T
Q  429 taacagacat 438  Q
    |||| |||||    
T  2036732 taactgacat 2036723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 329 - 438
Target Start/End: Complemental strand, 2040573 - 2040464
Alignment:
Q  329 aacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcag 428  Q
    ||||||||||||||||| |||||||| || ||||| || ||||||| | |||| || || || ||||| || | |||||||||||| ||||||||||| |    
T  2040573 aacccattctcaaacttaatgcacttggagaactccgctgtctctgcactgtaatgagggtagaacttagcaagttccacaaacttagcagcatactccg 2040474  T
Q  429 taacagacat 438  Q
    |||| |||||    
T  2040473 taactgacat 2040464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 329 - 438
Target Start/End: Original strand, 14039955 - 14040064
Alignment:
Q  329 aacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcag 428  Q
    ||||||||||||||||| |||||||| || ||||| || ||||||| | |||| || || || ||||| || | |||||||||||| ||||||||||| |    
T  14039955 aacccattctcaaacttaatgcacttggagaactccgctgtctctgcactgtaatgagggtagaacttagcaagttccacaaacttagcagcatactccg 14040054  T
Q  429 taacagacat 438  Q
    |||| |||||    
T  14040055 taactgacat 14040064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 303 - 438
Target Start/End: Complemental strand, 16825225 - 16825090
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||| ||||||||||| ||||| |  |  |||||||||| ||| || ||||| || |||||||||||||| | ||| || || |||||||||||||| |     
T  16825225 caatagccctcttgatatcagctctcaggccattctcaatctttatacacttggagaactcagcagtctccgcagtataatgaggataaaactttgcaag 16825126  T
Q  403 ttccacaaacttggcagcatactcagtaacagacat 438  Q
     ||||||||||| || |||||||| || ||||||||    
T  16825125 ctccacaaacttagctgcatactctgttacagacat 16825090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 438
Target Start/End: Original strand, 17494841 - 17494968
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| |  || |||||||||||||| || || || || |||||||| ||||| | ||| ||||| || || ||||| || | ||||||||    
T  17494841 ctcttgatatcagctctcaaaccattctcaaacttaatacatttggagaactcagctgtctccgcagtatagtgggggtagaacttagcaagttccacaa 17494940  T
Q  411 acttggcagcatactcagtaacagacat 438  Q
    |||| ||||||||||| |||||||||||    
T  17494941 actttgcagcatactctgtaacagacat 17494968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 329 - 440
Target Start/End: Original strand, 47127153 - 47127264
Alignment:
Q  329 aacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcag 428  Q
    |||||||||||||||||||| ||||| || |||||||| ||||| | | |||| || ||||||||  | || |  ||||||||||| ||||||||||| |    
T  47127153 aacccattctcaaacttgatacacttggagaactcagctgtctccgcactgtaatgaggataaaatgtggcaagctccacaaactttgcagcatactctg 47127252  T
Q  429 taacagacatgt 440  Q
    | ||||||||||    
T  47127253 tgacagacatgt 47127264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 332 - 438
Target Start/End: Original strand, 15230815 - 15230921
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    ||||| |||||||| ||||||||||| ||||||| |||||| | ||| || || ||||| || ||||| |  ||||||||||| | |||||||||||| |    
T  15230815 ccattttcaaacttaatgcactttgagaactcagtagtctcggcagtataatgtggatataattttgcaagctccacaaacttagaagcatactcagtta 15230914  T
Q  432 cagacat 438  Q
    |||||||    
T  15230915 cagacat 15230921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 332 - 438
Target Start/End: Original strand, 15236683 - 15236789
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    ||||| |||||||| ||||||||||| ||||||| |||||| | ||| || || ||||| || ||||| |  ||||||||||| | |||||||||||| |    
T  15236683 ccattttcaaacttaatgcactttgagaactcagtagtctcggcagtataatgtggatataattttgcaagctccacaaacttagaagcatactcagtta 15236782  T
Q  432 cagacat 438  Q
    |||||||    
T  15236783 cagacat 15236789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 311 - 456
Target Start/End: Complemental strand, 18131285 - 18131140
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| |  || ||||||||||||||||| || || || |||||||| ||||| |  || ||||| || || ||||| || | ||||||||    
T  18131285 ctcttgatgtcagctctcaagccattctcaaacttgatacatttggagaactcagctgtctccgtggtatagtgggggtagaacttagcaagttccacaa 18131186  T
Q  411 acttggcagcatactcagtaacagacatgtatccttgcttcagctc 456  Q
    |||| |||||||| || ||||||||||| |  || |||||||||||    
T  18131185 acttcgcagcatattctgtaacagacatatccccctgcttcagctc 18131140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 440
Target Start/End: Complemental strand, 10416962 - 10416854
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||||||||||||||| || || |||||||| ||||| | ||||||||| || ||||||||||| | ||||   ||||| || |||||||| || |    
T  10416962 ccattctcaaacttgatgcatttggagaactcagctgtctccgcagtgtagtgagggtaaaactttgcaagttccgtgaacttagctgcatactccgtga 10416863  T
Q  432 cagacatgt 440  Q
    | |||||||    
T  10416862 ctgacatgt 10416854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 380 - 464
Target Start/End: Original strand, 13249291 - 13249375
Alignment:
Q  380 tagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaatt 464  Q
    ||||||||||| ||||| | ||  ||||| ||||||||||||| ||| || || ||||| | |||||||||||||||||||||||    
T  13249291 tagtgcggatagaacttagacagctccacgaacttggcagcatgctctgtcacggacatatttccttgcttcagctcaaggaatt 13249375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 438
Target Start/End: Complemental strand, 8744328 - 8744201
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| |  || |||||||||||||| |||||||| || || ||||| ||||| ||||  || || ||||| |||||||| |  |||||||    
T  8744328 ctcttgatgtcagctctcaagccattctcaaactttatgcacttggagaattcagctgtctccggagcataatggggatagaactttgcaagctccacaa 8744229  T
Q  411 acttggcagcatactcagtaacagacat 438  Q
    | || ||||||||||||  |||||||||    
T  8744228 attttgcagcatactcaacaacagacat 8744201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 311 - 456
Target Start/End: Complemental strand, 16384310 - 16384165
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| |  || |||||||||||||| || || || || || ||||| ||||| | ||| || || || || |||||||| | ||||||||    
T  16384310 ctcttgatgtcagctctcaagccattctcaaactttatacatttggagaattcagctgtctccgcagtataatgggggtataactttgcaagttccacaa 16384211  T
Q  411 acttggcagcatactcagtaacagacatgtatccttgcttcagctc 456  Q
    |||| ||||||||||||  ||||||||| |  || |||||||||||    
T  16384210 actttgcagcatactcaacaacagacatatcaccctgcttcagctc 16384165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 464
Target Start/End: Original strand, 13945236 - 13945368
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||||||||| |||||||| || || ||||| ||||| ||||  || || || || |||||||| |  |||||||| || ||||||||||||  ||    
T  13945236 ccattctcaaactttatgcacttggagaattcagctgtctccggagcataatgggggtagaactttgcaagctccacaaattttgcagcatactcaacaa 13945335  T
Q  432 cagacatgtatccttgcttcagctcaaggaatt 464  Q
    ||||||| |  || ||||||| ||| |||||||    
T  13945336 cagacatatcaccctgcttcaactccaggaatt 13945368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 456
Target Start/End: Original strand, 31942115 - 31942239
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||||||||| || || || || || ||||| ||||| | ||| || || || || |||||||| | |||||| ||||| ||||||||||| || |    
T  31942115 ccattctcaaactttatacatttggagaattcagctgtctccgtagtataatgagggtagaactttgcaagttccacgaacttagcagcatactctgtga 31942214  T
Q  432 cagacatgtatccttgcttcagctc 456  Q
    |||||||||  || |||||||||||    
T  31942215 cagacatgtcaccctgcttcagctc 31942239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 423
Target Start/End: Complemental strand, 2245589 - 2245498
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcata 423  Q
    |||||||| ||||| |||||||| || ||||||||||||||    ||||| || ||||||||||| || |  ||||||||||| ||||||||    
T  2245589 ccattctcgaactttatgcacttagagaactcagcagtctcaacggtgtaatgtggataaaacttagcaagctccacaaactttgcagcata 2245498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 438
Target Start/End: Complemental strand, 16831466 - 16831339
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| |  || ||||| |||||||| || || || || || ||||| ||||| | ||| ||||| || || |||||||| | ||||||||    
T  16831466 ctcttgatgtcagctctcaagccattgtcaaactttatacatttggagaattcagctgtctccgcagtatagtgggggtagaactttgcaagttccacaa 16831367  T
Q  411 acttggcagcatactcagtaacagacat 438  Q
    |||| ||||||||||||  |||||||||    
T  16831366 actttgcagcatactcaacaacagacat 16831339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 455
Target Start/End: Original strand, 24190486 - 24190638
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||| ||||||||||| ||||| |  |  |||||||||||||| || || || || || ||||| ||||| | ||| ||||| || || ||||| || |     
T  24190486 caatagccctcttgatatcagctctcaggccattctcaaacttaatacatttggagaattcagctgtctccgcagtatagtgagggtagaacttagcaag 24190585  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagct 455  Q
    |||||||||||| ||||| || || || ||||||||||  || ||||||||||    
T  24190586 ttccacaaacttcgcagcgtattctgtgacagacatgtcaccctgcttcagct 24190638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 88; Significance: 4e-42; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 22187 - 22346
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||| |||||||| ||||| |  || |||||||| |||||||| ||||| ||||||||||||||||||| || ||| ||| ||||||||||||||||    
T  22187 caattgctctcttgatctcagcccgcaatccattctcgaacttgatacacttcgaaaactcagcagtctctgcagcgtaatgcagataaaactttgccaa 22286  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     |||||||||||||||||||||||||| |  ||||||| |||||||||||||||||||||    
T  22287 ctccacaaacttggcagcatactcagtcaatgacatgtttccttgcttcagctcaaggaa 22346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 37611 - 37770
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||| |||||||| ||||| |  || |||||||| |||||||| ||||| ||||||||||||||||||| || ||| ||| ||||||||||||||||    
T  37611 caattgctctcttgatctcagcccgcaatccattctcgaacttgatacacttcgaaaactcagcagtctctgcagcgtaatgcagataaaactttgccaa 37710  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     |||||||||||||||||||||||||| |  ||||||| |||||||||||||||||||||    
T  37711 ctccacaaacttggcagcatactcagtcaatgacatgtttccttgcttcagctcaaggaa 37770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 303 - 462
Target Start/End: Complemental strand, 66251 - 66092
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||||||| || ||| |||  || |||||||| ||||||||||||||||| |||||||||||||||| || ||| |||||||| |||| ||||||    
T  66251 caattgccctctttatatcaacacgcaatccattctcgaacttgatgcactttgagaactcagcagtctctgcagcgtaatgcggatagaactatgccaa 66152  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     || ||||||||||||||||||||||| || ||||||| |||||||||||||||||||||    
T  66151 ctctacaaacttggcagcatactcagttacggacatgtttccttgcttcagctcaaggaa 66092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 84; Significance: 1e-39; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 8797 - 8956
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||||||| || ||||| |  || |||||||| |||||||| |||||  ||||||||| |||||||| || ||||||||||||||||||||||||    
T  8797 caattgccctctttatatcagcccgcaatccattctcgaacttgatacacttcaaaaactcagtagtctctgcagcgtagtgcggataaaactttgccaa 8896  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     ||||||||||||||||||||||| || |  ||||||| |||||||||||||||||||||    
T  8897 ctccacaaacttggcagcatactcggtcatggacatgtttccttgcttcagctcaaggaa 8956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 335 - 464
Target Start/End: Complemental strand, 107466 - 107337
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||| | ||| |||||||| || ||||| | ||  ||||| ||||||||||||||||| || ||||    
T  107466 ttctcgaacttgatgcatctcgagaactcagcattctcagcagtatagtgcgggtagaacttcgacagctccacgaacttggcagcatactctgtcacag 107367  T
Q  435 acatgtatccttgcttcagctcaaggaatt 464  Q
    |||||| |||||||||||||||||||||||    
T  107366 acatgtttccttgcttcagctcaaggaatt 107337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 332 - 452
Target Start/End: Complemental strand, 93586 - 93466
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    ||||| || ||||||||||| || || |||||||| ||||| | ||||||||| |||||||| ||||| | ||||   || || || |||||||| || |    
T  93586 ccattttcgaacttgatgcatttggagaactcagctgtctccgcagtgtagtgtggataaaattttgcaagttccgtgaatttagctgcatactccgtga 93487  T
Q  432 cagacatgtatccttgcttca 452  Q
    | |||||||  ||||||||||    
T  93486 ccgacatgttaccttgcttca 93466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 104809 - 104968
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||| |||||| |||||||  || ||||||||||| || ||||| || ||||||||| ||||||| | ||||||||||||||||||||| || |     
T  104809 caattgcccgcttgatctcagcacgcaaaccattctcaaatttaatgcatttagaaaactcaacagtctcagcagtgtagtgcggataaaacttagctag 104908  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||||||||||||||||||||| |||||||| | || ||||||||||||||||||    
T  104909 ttccacaaacttggcagcatactcagtcacagacatatttcattgcttcagctcaaggaa 104968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1274 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold1274
Description:

Target: scaffold1274; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 200 - 359
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||| |||||| |||||||  || ||||||||||| ||||||||||| |||||||||| |||||| | ||||||||||||||||||||| ||||     
T  200 caattgcccgcttgatctcagcacgcaagccattctcaaatttgatgcacttagaaaactcagtagtctcagcagtgtagtgcggataaaacttagccag 299  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     |||||||| || |||||||| ||||| || ||||| | |||||||||||||||||||||    
T  300 ctccacaaattttgcagcatattcagtcactgacatatttccttgcttcagctcaaggaa 359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 303 - 462
Target Start/End: Complemental strand, 55192 - 55033
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||| ||||| || |||||||  || || |||||||| ||||| ||||||||||||||||||||||| | ||| ||||| ||||| |||||||||||    
T  55192 caattgctctcttaatctcagcacgcaaaccgttctcaaatttgatacactttgaaaactcagcagtctcggcagtatagtgtggatagaactttgccaa 55093  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     ||||||||||||||| ||||||| || || ||||||| |||||||||||||||||||||    
T  55092 ctccacaaacttggcaacatactctgtcactgacatgtttccttgcttcagctcaaggaa 55033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 48313 - 48472
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||| ||||| || |||||||  || || || ||||| ||||| ||||||||||||||||||||||| | ||| ||||||||||| |||||||||||    
T  48313 caattgctctcttaatctcagcacacaaaccgttatcaaatttgatacactttgaaaactcagcagtctcggcagtatagtgcggatagaactttgccaa 48412  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     |||| ||| |||||||||||||| || |  ||||||| |||||||||||| ||||||||    
T  48413 ctccataaaattggcagcatactctgtcattgacatgtttccttgcttcaggtcaaggaa 48472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 80; Significance: 2e-37; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 303 - 462
Target Start/End: Complemental strand, 30295 - 30136
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||||||| || |||||    || |||||||| |||||||| ||||| |||||||| | |||||||| || ||| ||||||||||||||||||||    
T  30295 caattgccctctttatatcagcctgcaatccattctcgaacttgatacacttcgaaaactctgaagtctctgtagcgtaatgcggataaaactttgccaa 30196  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     |||||||||||||||||||||||||| || || |||| |||||||||||||||||||||    
T  30195 ctccacaaacttggcagcatactcagttacggagatgtttccttgcttcagctcaaggaa 30136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 311 - 462
Target Start/End: Complemental strand, 43166 - 43015
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||||| ||| || ||||| || |||||||| || ||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||    
T  43166 ctcttgatctcagcacgtaaaccgttctcgaatttgatgcatttcgaaaactcagcagtctctgcagtgtagtgtggataaaactttaccaattccacaa 43067  T
Q  411 acttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    |||| ||||||||||| || || ||| |||  ||||| |||||||| |||||    
T  43066 acttagcagcatactctgtcactgacctgttcccttgtttcagctctaggaa 43015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 458
Target Start/End: Complemental strand, 164091 - 163967
Alignment:
Q  334 attctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaaca 433  Q
    |||||||||||| || || || || ||||||||  |||| |  |||||||| || || ||| |||| | |||||||||||| ||||||||||| || |||    
T  164091 attctcaaactttatacatttggagaactcagctatctccgcggtgtagtgggggtagaaccttgcaagttccacaaacttagcagcatactctgtgaca 163992  T
Q  434 gacatgtatccttgcttcagctcaa 458  Q
     ||||||  || |||||||||||||    
T  163991 aacatgtcaccctgcttcagctcaa 163967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 334 - 458
Target Start/End: Original strand, 4156 - 4280
Alignment:
Q  334 attctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaaca 433  Q
    ||||| ||| ||||| ||||||||||| ||||||||||||| ||| ||||||||||||||||||||||| ||||| ||||||||||||||||| || |||    
T  4156 attctaaaatttgatacactttgaaaattcagcagtctctgaagtatagtgcggataaaactttgccaactccacgaacttggcagcatactctgtcaca 4255  T
Q  434 gacatgtatccttgcttcagctcaa 458  Q
    ||||||| |||||| ||||||||||    
T  4256 gacatgtttccttgtttcagctcaa 4280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 332 - 459
Target Start/End: Original strand, 715 - 842
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| ||||||||||||||||| |||||||||||||| | || ||| ||||||||||| |||||||| || ||||||||||||||||||||||| |    
T  715 ccattctcgaacttgatgcactttgagaactcagcagtctcagcagcgtaatgcggataaaaatttgccaactctacaaacttggcagcatactcagtta 814  T
Q  432 cagacatgtatccttgcttcagctcaag 459  Q
    | ||||||| ||||||||| ||||||||    
T  815 cggacatgtttccttgctttagctcaag 842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 14 - 173
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||||||| || ||||  |  || |||||||| ||||||||||||||||| ||||||  |||||| | ||  || ||||||||||||||||||||    
T  14 caattgccctcttaatatcaggccgcaaaccattctcgaacttgatgcactttgagaactcaatagtctcagcagcataatgcggataaaactttgccaa 113  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     || ||||||||||||||||||||||| || ||||||| |||||||||||||||||||||    
T  114 ctcaacaaacttggcagcatactcagtcacggacatgtttccttgcttcagctcaaggaa 173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 302 - 429
Target Start/End: Original strand, 7082 - 7209
Alignment:
Q  302 tcaattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgcca 401  Q
    |||||||||||||| || ||| ||   || || |||||||| ||||| |||||||||||||||| |||||||||||||||||| ||||| ||||||||||    
T  7082 tcaattgccctcttaatctcatcatgcaaaccgttctcaaatttgatacactttgaaaactcaggagtctctggagtgtagtgtggatataactttgcca 7181  T
Q  402 attccacaaacttggcagcatactcagt 429  Q
    ||||||||||||||||||||||||||||    
T  7182 attccacaaacttggcagcatactcagt 7209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 371 - 530
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||||||| || ||||  | ||| |||||||| |||||||| ||||| ||||||||||||||||| | ||  || || ||||| |||||||||||    
T  371 caattgccctcttaatatcaggccgtaaaccattctcgaacttgatacacttcgaaaactcagcagtctcagcagcataatgtggatagaactttgccaa 470  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     || |||||||||||||||||| |||| |||||||||| |||||||||||||||||||||    
T  471 ctcaacaaacttggcagcatacccagtcacagacatgtttccttgcttcagctcaaggaa 530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 303 - 462
Target Start/End: Complemental strand, 216141 - 215982
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||| |||||| |||||||  || ||||||||||| ||||||||||| || |||||||||||||| | ||||||||||||||||||||| ||||     
T  216141 caattgcccacttgatctcagcacgcaagccattctcaaaattgatgcacttggagaactcagcagtctcggcagtgtagtgcggataaaacttagccag 216042  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     |||||||| || |||||||| ||||| || ||||| | ||||||||| |||||||||||    
T  216041 ctccacaaattttgcagcatattcagtcactgacatatttccttgctttagctcaaggaa 215982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 5610 - 5740
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| ||||||||||| ||||| |||||||||||||| | ||| ||||| || || ||||||||||| ||||| ||||||||||||||||| || |    
T  5610 ccattctcgaacttgatgcattttgagaactcagcagtctcagcagtatagtgtgggtagaactttgccaactccacgaacttggcagcatactcggtca 5709  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||| |||||||||||||||||||||    
T  5710 cagacatgtttccttgcttcagctcaaggaa 5740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 23918 - 23788
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    ||||||| |||||||||||| ||||| |||||||||||||| | | | || || ||||||||||||||||| ||||| ||||||||||||||||| || |    
T  23918 ccattcttaaacttgatgcattttgagaactcagcagtctcagcaatataatgtggataaaactttgccaactccacgaacttggcagcatactcggtca 23819  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||| |||||||||||||||||||||    
T  23818 cagacatgtttccttgcttcagctcaaggaa 23788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 356 - 462
Target Start/End: Complemental strand, 40265 - 40159
Alignment:
Q  356 gaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagct 455  Q
    |||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| || || ||||||| |||||| |||||||    
T  40265 gaaaactcagtagtctctgcagtgtaatgcggataaaactttgccaattccacaaacttggcagcatactctgtcactgacatgtttccttggttcagct 40166  T
Q  456 caaggaa 462  Q
    |||||||    
T  40165 caaggaa 40159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 314 - 462
Target Start/End: Original strand, 4145 - 4293
Alignment:
Q  314 ttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaact 413  Q
    ||||| ||||||| ||| |||||||| ||  ||||||| || ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  4145 ttgatctcagcacgtaaaccattctcgaatatgatgcatttcgaaaactcagcagtctctacagtgtagtgcggataaaactttgccaattccacaaact 4244  T
Q  414 tggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    ||| ||||||||| || || |||||||  ||||  |||||||| |||||    
T  4245 tggaagcatactctgtcactgacatgttcccttctttcagctctaggaa 4293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 311 - 462
Target Start/End: Original strand, 608 - 759
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||||| ||| || ||||| || |||||||| || ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  608 ctcttgatctcagcacgtaaaccgttctcgaatttgatgcatttcgaaaactcaacagtctctgcagtgtagtgcggataaaactttgccaattccacaa 707  T
Q  411 acttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    |||||| ||| ||||  || || |||||||  ||||| |||||||| |||||    
T  708 acttggtagcgtactttgtcactgacatgttcccttgtttcagctctaggaa 759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 311 - 462
Target Start/End: Original strand, 5025 - 5176
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||||| ||| || ||||| || |||||||| || ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  5025 ctcttgatctcagcacgtaaaccgttctcgaatttgatgcatttcgaaaactcaacagtctctgcagtgtagtgcggataaaactttgccaattccacaa 5124  T
Q  411 acttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    |||||| ||| ||||  || || |||||||  ||||| |||||||| |||||    
T  5125 acttggtagcgtactttgtcactgacatgttcccttgtttcagctctaggaa 5176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 303 - 462
Target Start/End: Complemental strand, 13986 - 13827
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||| |||||| |||||||  || ||||||||||| ||||||||||| || |||||||| |||||   ||||||||||||||||||||| ||||     
T  13986 caattgcccgcttgatctcagcacacaagccattctcaaatttgatgcacttggagaactcagctgtctcaacagtgtagtgcggataaaacttagccag 13887  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     |||||||| || |||||||| ||||| || ||||| | |||||||||||||||||||||    
T  13886 ctccacaaattttgcagcatattcagtcactgacatatttccttgcttcagctcaaggaa 13827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 303 - 462
Target Start/End: Complemental strand, 11077 - 10918
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||||||| || ||||  | ||| ||||||||||| |||||||| || |||||||||||| |||| | ||  ||||| ||||| |||||||||||    
T  11077 caattgccctcttaatatcaggccgtaatccattctcaaatttgatgcatttagaaaactcagcaatctcagcagcatagtgtggatagaactttgccaa 10978  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     ||||| ||||||||||||||||| |  |||||||||| |||||||||||||||||||||    
T  10977 ctccacgaacttggcagcatactcggacacagacatgtttccttgcttcagctcaaggaa 10918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 303 - 462
Target Start/End: Complemental strand, 14762 - 14603
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||||||| || ||||  | ||| ||||||||||| |||||||| || |||||||||||| |||| | ||  ||||| ||||| |||||||||||    
T  14762 caattgccctcttaatatcaggccgtaatccattctcaaatttgatgcatttagaaaactcagcaatctcagcagcatagtgtggatagaactttgccaa 14663  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     ||||| ||||||||||||||||| |  |||||||||| |||||||||||||||||||||    
T  14662 ctccacgaacttggcagcatactcggacacagacatgtttccttgcttcagctcaaggaa 14603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 8806 - 8965
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||| ||||| || |||||||  || || ||||| || ||||| ||||| ||||||||||||||||||| ||  || ||||||||||||||||||||    
T  8806 caattgctctctttatctcagcacacaatccgttctcgaatttgatacacttcgaaaactcagcagtctctgcagaataatgcggataaaactttgccaa 8905  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     ||||||||||||||||||||||| || || ||||| | |||||||||||||| ||||||    
T  8906 ctccacaaacttggcagcatactctgtcactgacatatttccttgcttcagcttaaggaa 8965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 37081 - 37240
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||||||| || ||||  |  || ||||||||||||||||| |||||||| |||| ||||||||| | ||  || ||||||||||||||||||||    
T  37081 caattgccctcttaatatcaggccgcaaaccattctcaaacttgattcactttgagaacttagcagtctcagcagcataatgcggataaaactttgccaa 37180  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     |  ||||||||||||||||||||||| || ||||||| |||||| ||||||||||||||    
T  37181 cttaacaaacttggcagcatactcagtcacggacatgtttccttggttcagctcaaggaa 37240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 72; Significance: 1e-32; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 5498 - 5657
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||| |||||| ||||||   || ||||||||||| ||||||||||| || |||||||||||||| | ||||||||||||||||||||| | |||    
T  5498 caattgcccgcttgatctcagcatgcaagccattctcaaatttgatgcacttggagaactcagcagtctcggcagtgtagtgcggataaaacttagtcaa 5597  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     |||||||| || ||| |||| ||||| || ||||| | |||||||||||||||||||||    
T  5598 ctccacaaattttgcaacatattcagtcactgacatatttccttgcttcagctcaaggaa 5657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 15036 - 15166
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| ||||||||||| || || |||||||||||||| | ||  || |||||||| ||||||||||| ||||||||||||||||||||||| || |    
T  15036 ccattctcgaacttgatgcatttcgagaactcagcagtctcagcagcataatgcggatagaactttgccaactccacaaacttggcagcatactctgtca 15135  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||| |||||||||| ||||||||||    
T  15136 cagacatgtttccttgcttctgctcaaggaa 15166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 456
Target Start/End: Complemental strand, 39027 - 38903
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    ||||||||||||||||| || || || |||||||| ||||| |  || ||||| || || |||||||  | |||||||||||| |||||||| ||  |||    
T  39027 ccattctcaaacttgatacatttggagaactcagctgtctccgcggtatagtgggggtagaactttgaaagttccacaaacttagcagcatattctataa 38928  T
Q  432 cagacatgtatccttgcttcagctc 456  Q
    |||||||||  || |||||||||||    
T  38927 cagacatgtcaccctgcttcagctc 38903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1881 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold1881
Description:

Target: scaffold1881; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 172 - 42
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| ||||||||| | || || |||||||||||||| | ||  |||||||| || ||||||||||| ||||||||||||||||||||||| || |    
T  172 ccattctcgaacttgatgtatttcgagaactcagcagtctcagcagcatagtgcgggtagaactttgccaactccacaaacttggcagcatactctgtca 73  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||| |||||||||||||||||||||    
T  72 cagacatgtttccttgcttcagctcaaggaa 42  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1459 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold1459
Description:

Target: scaffold1459; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 784 - 654
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||||||||||||||| ||||| |||||| ||||||| | ||| || || || |||||||||||||| ||||| |||||||||| |||||| || |    
T  784 ccattctcaaacttgatgcattttgagaactcaacagtctcagcagtataatgtgggtaaaactttgccaactccacgaacttggcagtatactcggtca 685  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||| |||||||||||||||||||||    
T  684 cagacatgtttccttgcttcagctcaaggaa 654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 10231 - 10361
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    ||||||| ||| ||||| ||||||||| | ||||||||||||| ||| |||||||||||| |||||||||| ||||| ||||||||||||||||| || |    
T  10231 ccattcttaaatttgatacactttgaatattcagcagtctctgcagtatagtgcggataagactttgccaactccacgaacttggcagcatactctgtca 10330  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    | ||||||| |||||| ||||||||||||||    
T  10331 ctgacatgtttccttgtttcagctcaaggaa 10361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 13722 - 13592
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| ||||||||| | ||  | ||||||||||| || | ||||||||| ||||| ||||||||||| ||||| |||||||||||||||||||| |    
T  13722 ccattctcgaacttgatgtatttcaagaactcagcagtttcagcagtgtagtgtggatagaactttgccaactccacgaacttggcagcatactcagtca 13623  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||| |||||||||||||||||||||    
T  13622 cagacatgtttccttgcttcagctcaaggaa 13592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 17669 - 17539
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    ||||||||||| ||||| ||||||||||| |||||| |||||| ||| |||||| | |||||||||||||| ||||| ||||||||||||||||| || |    
T  17669 ccattctcaaatttgatacactttgaaaattcagcaatctctgcagtatagtgctggtaaaactttgccaactccacgaacttggcagcatactctgtca 17570  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    | ||||||| |||||| ||||||||||||||    
T  17569 ctgacatgtttccttgtttcagctcaaggaa 17539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 3476 - 3606
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| ||||||||||| || || |||||| ||||||| | ||||||||| ||||| ||||||||||| ||||| ||||||||||||||||| || |    
T  3476 ccattctcgaacttgatgcatttcgagaactcatcagtctcagcagtgtagtgtggatagaactttgccaactccacgaacttggcagcatactcggtca 3575  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||| ||||||||| |||||||||||    
T  3576 cagacatgtttccttgctttagctcaaggaa 3606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 2812 - 2967
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||| |||||||| ||||||| ||| || ||||| || |||||||| || |    |||||||||||||| ||| || |||||||||||| |||||||    
T  2812 caattgctctcttgatctcagcacgtaaaccgttctcgaatttgatgcatttcg----ctcagcagtctctgcagtataatgcggataaaaccttgccaa 2907  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     |||||||||||||||||||||||||| |||||||| | ||||||||||| |||||||||    
T  2908 ctccacaaacttggcagcatactcagtcacagacatatttccttgcttcaactcaaggaa 2967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 369 - 462
Target Start/End: Complemental strand, 30654 - 30561
Alignment:
Q  369 tctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    |||||||||| ||||||||||||||||||||||||||||||||||   ||||||||||||| |||||||||| |||||||||||||||||||||    
T  30654 tctctggagtatagtgcggataaaactttgccaattccacaaactctacagcatactcagtcacagacatgtttccttgcttcagctcaaggaa 30561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 69; Significance: 9e-31; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 332 - 464
Target Start/End: Original strand, 41764 - 41896
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| |||||||||||  | || ||||||||| |||| ||||| |||||||| |||||||| ||||  || ||||||||||||||||||||||| |    
T  41764 ccattctcgaacttgatgcatctcgagaactcagcattctcaggagtatagtgcgggtaaaacttcgccacctcaacaaacttggcagcatactcagtca 41863  T
Q  432 cagacatgtatccttgcttcagctcaaggaatt 464  Q
    ||||||||| ||||| |||||||||||||||||    
T  41864 cagacatgtttccttacttcagctcaaggaatt 41896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 12816 - 12686
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| |||||||||||  | || |||||||||||||| | ||  ||||  || || ||||||||||| ||||| ||||||||||||||||| || |    
T  12816 ccattctcgaacttgatgcatgtcgagaactcagcagtctcagcagcatagttggggtagaactttgccaactccacgaacttggcagcatactctgtta 12717  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    |||||||||  ||||| ||||||||||||||    
T  12716 cagacatgttcccttggttcagctcaaggaa 12686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 7456 - 7615
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||| |||||| |||||||  || ||||||||||| ||||||||||  || |||||||||||||| | ||| ||||||||||||||||| ||||     
T  7456 caattgcccgcttgatctcagcacgcaagccattctcaaatttgatgcactaggagaactcagcagtctcagcagtatagtgcggataaaacttagccag 7555  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     |||||||| || |||||||| ||||| || |||||   |||||||||||||||||||||    
T  7556 ctccacaaattttgcagcatattcagtcactgacatacttccttgcttcagctcaaggaa 7615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 14586 - 14745
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||| |||||| |||||||  || ||||||||||| ||||||||||  || |||||||||||||| | ||| ||||||||||||||||| ||||     
T  14586 caattgcccgcttgatctcagcacgcaagccattctcaaatttgatgcactaggagaactcagcagtctcagcagtatagtgcggataaaacttagccag 14685  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     |||||||| || |||||||| ||||| || |||||   |||||||||||||||||||||    
T  14686 ctccacaaattttgcagcatattcagtcactgacatacttccttgcttcagctcaaggaa 14745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 303 - 462
Target Start/End: Complemental strand, 23666 - 23507
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||| ||||| |||| ||||| ||| |||||||| || | ||| |||||  |||||||||||||||||  ||| |||||||||||||||||||||||    
T  23666 caattgctctcttaatttgagcacgtaaaccattctcgaattcgatacacttcaaaaactcagcagtctctacagtatagtgcggataaaactttgccaa 23567  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     || || |||||||||||||||||  | || ||||||| |||||| ||||||||||||||    
T  23566 ctctacgaacttggcagcatactctatcactgacatgtttccttgtttcagctcaaggaa 23507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 311 - 456
Target Start/End: Complemental strand, 9487 - 9342
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| |  || ||||||||||||||||| || || || ||||||||  |||| |  || || || || || |||||||| |  |||||||    
T  9487 ctcttgatgtcagctctcaagccattctcaaacttgatacatttggagaactcagctttctccgcggtataatgggggtagaactttgcaagctccacaa 9388  T
Q  411 acttggcagcatactcagtaacagacatgtatccttgcttcagctc 456  Q
    |||| |||||||| ||||||||||||||||  || |||||||||||    
T  9387 acttagcagcatattcagtaacagacatgtcaccctgcttcagctc 9342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 311 - 426
Target Start/End: Complemental strand, 4268 - 4153
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    ||||||||  |||||| ||| || ||||  || |||||||| || ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  4268 ctcttgatcccagcacgtaaaccgttcttgaatttgatgcatttcgaaaactcagcagtctctgcagtgtagtgtggataaaactttgccaattccacaa 4169  T
Q  411 acttggcagcatactc 426  Q
    ||||||||||||||||    
T  4168 acttggcagcatactc 4153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 303 - 462
Target Start/End: Complemental strand, 23254 - 23095
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||| | |||||| |||||||  || |||||||||||  |||||||||| ||||| |||||||||||   ||| ||||||||||||||||| |||||    
T  23254 caattgctcgcttgatctcagcacgcaagccattctcaaatctgatgcacttagaaaattcagcagtctcaaaagtatagtgcggataaaacttagccaa 23155  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     ||||||||||| || ||||| ||||| || ||||| | |||||||||||||||||||||    
T  23154 ctccacaaactttgccgcatattcagtcactgacatatttccttgcttcagctcaaggaa 23095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 67; Significance: 1e-29; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 121868 - 121738
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| |||||||| ||||| ||||||||||||||||| | ||  || |||||||| ||||||||||| || |||||||||| |||||||||||| |    
T  121868 ccattctcgaacttgatacacttcgaaaactcagcagtctcagcagcataatgcggatagaactttgccaactcaacaaacttggaagcatactcagtca 121769  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    | |||| || |||||||||||||||||||||    
T  121768 cggacaggtttccttgcttcagctcaaggaa 121738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 338 - 440
Target Start/End: Original strand, 70990 - 71092
Alignment:
Q  338 tcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacagaca 437  Q
    ||||||||||| || || || |||||||| ||||| | ||||||||| |||||||||||||| | ||||   ||||| ||||||||||| || |||||||    
T  70990 tcaaacttgatacatttggagaactcagctgtctccgcagtgtagtgaggataaaactttgcaagttccgtgaacttagcagcatactctgtgacagaca 71089  T
Q  438 tgt 440  Q
    |||    
T  71090 tgt 71092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 456
Target Start/End: Complemental strand, 11553 - 11474
Alignment:
Q  377 gtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctc 456  Q
    |||||||| || || |||||||| | |||||||||||| ||||||||||| || ||||||||||   | |||||||||||    
T  11553 gtgtagtgggggtagaactttgcaagttccacaaacttagcagcatactctgtgacagacatgtcagcctgcttcagctc 11474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 229544 - 229414
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||  ||||||||||| || || |||||||||||||| | ||| ||||| ||||| ||||||||||| ||||| |||||||||||||||||  | |    
T  229544 ccattcttgaacttgatgcatttcgagaactcagcagtctcagcagtatagtgtggatagaactttgccaactccacgaacttggcagcatactcgatca 229445  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||| |||||||||||||||||||||    
T  229444 cagacatgtttccttgcttcagctcaaggaa 229414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1220 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 332 - 464
Target Start/End: Original strand, 348 - 480
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| |||||||| |||||  |||||||||||||||| | ||  || || ||||||||||||||||| || ||||| ||||||||||||||||| |    
T  348 ccattctcgaacttgatacacttcaaaaactcagcagtctcggcagcataatgtggataaaactttgccaactcaacaaatttggcagcatactcagtca 447  T
Q  432 cagacatgtatccttgcttcagctcaaggaatt 464  Q
    | ||| ||| |||||||||||||||||||||||    
T  448 cggacttgtttccttgcttcagctcaaggaatt 480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0789 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0789
Description:

Target: scaffold0789; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 332 - 464
Target Start/End: Original strand, 536 - 668
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| |||||||||||  | |||||||||||| |||| | ||  || || ||||||||||| ||||| || ||||||||||||||||||||||| |    
T  536 ccattctcgaacttgatgcatatcgaaaactcagcaatctcagaagaataatgaggataaaacttcgccaactcaacaaacttggcagcatactcagtca 635  T
Q  432 cagacatgtatccttgcttcagctcaaggaatt 464  Q
    |||||||||  ||||||||||||||||||||||    
T  636 cagacatgttaccttgcttcagctcaaggaatt 668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 303 - 459
Target Start/End: Original strand, 36366 - 36522
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||| |||||| |||||||  || ||||||||||||||||||||||| || ||||||||| |||| | |||||| |||| ||||||||| |||||    
T  36366 caattgcccgcttgatatcagcacgcaaaccattctcaaacttgatgcacttggagaactcagcaatctcagcagtgtaatgcgcataaaacttagccaa 36465  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaag 459  Q
     ||||||||||| ||| ||||||| || || |||||||  |||||  ||||||||||    
T  36466 ctccacaaacttcgcaacatactcggtcacggacatgtcaccttggctcagctcaag 36522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 65; Significance: 2e-28; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 332 - 464
Target Start/End: Original strand, 12061 - 12193
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| |||||||||||  | || |||||| || |||| | ||| |||||||| |||||||| ||||| || ||||||||||||||||||||||| |    
T  12061 ccattctcgaacttgatgcatctcgagaactcaacattctcagcagtatagtgcgggtaaaacttcgccaactcaacaaacttggcagcatactcagtca 12160  T
Q  432 cagacatgtatccttgcttcagctcaaggaatt 464  Q
    ||||||||| ||||||||||| |||||||||||    
T  12161 cagacatgtttccttgcttcatctcaaggaatt 12193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 335 - 462
Target Start/End: Original strand, 55616 - 55743
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| ||||| ||||| || ||||||||||||| ||||| ||  || ||||| |||||||||||||| || || |||||||||||||||||||| ||||    
T  55616 ttctcgaacttaatgcatttcgaaaactcagcagcctctgcagcataatgcgggtaaaactttgccaactcaacgaacttggcagcatactcagtcacag 55715  T
Q  435 acatgtatccttgcttcagctcaaggaa 462  Q
    |||||  ||||||||| |||||||||||    
T  55716 acatgcttccttgctttagctcaaggaa 55743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 332 - 464
Target Start/End: Original strand, 21589 - 21721
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| |||||||||||  | || |||||| || |||| | ||| |||||||| |||||||| |||||    ||||||||||||||||||||||| |    
T  21589 ccattctcgaacttgatgcatctcgagaactcaacattctcagcagtatagtgcgggtaaaacttcgccaacaaaacaaacttggcagcatactcagtca 21688  T
Q  432 cagacatgtatccttgcttcagctcaaggaatt 464  Q
    ||||||||  ||||||||||| |||||||||||    
T  21689 cagacatgcttccttgcttcaactcaaggaatt 21721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 64; Significance: 9e-28; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 623 - 773
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||||||| || ||||| | ||| || ||||||||||||||||||||||| |||||||||||         ||| |||||||| || ||||||||    
T  623 caattgccctcttaatctcagctcgtaagccgttctcaaacttgatgcactttgagaactcagcagt---------gtaatgcggatagaattttgccaa 713  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
     ||||||||||||||||| |||||||| || ||||||| ||||||||||||||| |||||    
T  714 ctccacaaacttggcagcgtactcagtcacggacatgtttccttgcttcagctccaggaa 773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 64; Significance: 9e-28; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 335 - 462
Target Start/End: Original strand, 49277 - 49404
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| ||||| ||||| || ||||||||||||||||||| ||  || || || |||||||||||||| || ||||||||||||||||||| | | ||||    
T  49277 ttctcgaacttaatgcatttcgaaaactcagcagtctctgcagcataatgtgggtaaaactttgccaactcaacaaacttggcagcatactaaatcacag 49376  T
Q  435 acatgtatccttgcttcagctcaaggaa 462  Q
    |||||| |||||||||||||||||||||    
T  49377 acatgtttccttgcttcagctcaaggaa 49404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 305 - 423
Target Start/End: Complemental strand, 162727 - 162609
Alignment:
Q  305 attgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaatt 404  Q
    ||||||| |||||| |||||||  || ||| | ||||| |||||||||||  ||||||| ||  ||||   ||||||||| ||||||||||| ||||  |    
T  162727 attgcccgcttgatctcagcacgcaagccactttcaaatttgatgcacttgaaaaactcggcgttctcaacagtgtagtgtggataaaacttagccagct 162628  T
Q  405 ccacaaacttggcagcata 423  Q
    ||| |||||| ||||||||    
T  162627 ccataaactttgcagcata 162609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2059 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold2059
Description:

Target: scaffold2059; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 461 - 331
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| ||||| ||||| || || |||||| |||||||   |||||| || ||||| ||||||||||| ||||||||||||||||||||||| || |    
T  461 ccattctcgaactttatgcatttcgagaactcaccagtctcaacagtgtaatgtggatagaactttgccaactccacaaacttggcagcatactctgtca 362  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    | ||||||| |||||||||||||||||||||    
T  361 ccgacatgtttccttgcttcagctcaaggaa 331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 332 - 438
Target Start/End: Original strand, 16022 - 16128
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    ||||||||||| |||||||| || ||||||||||||||||| | ||||||||||||||||||||| ||||| ||||||||||| ||| |||||||||| |    
T  16022 ccattctcaaatttgatgcatttagaaaactcagcagtctcagcagtgtagtgcggataaaacttagccaactccacaaactttgcaacatactcagtca 16121  T
Q  432 cagacat 438  Q
    | |||||    
T  16122 ctgacat 16128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 341 - 462
Target Start/End: Original strand, 8876 - 8997
Alignment:
Q  341 aacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacagacatgt 440  Q
    ||||| ||||| || ||||||||||||||||||| ||  || |||||||||||||| ||||| || ||||||||||||||||||||||| || ||||| |    
T  8876 aacttaatgcatttcgaaaactcagcagtctctgtagcataatgcggataaaacttcgccaactcaacaaacttggcagcatactcagtcacggacatat 8975  T
Q  441 atccttgcttcagctcaaggaa 462  Q
     ||||||||||| |||||||||    
T  8976 ttccttgcttcaactcaaggaa 8997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 332 - 464
Target Start/End: Original strand, 10976 - 11108
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| |||||||||||  | || |||||| || |||| | ||| || ||||| |||||||| ||||| || ||||||||||||||||||||||| |    
T  10976 ccattctcgaacttgatgcatctcgagaactcaacattctcagcagtataatgcgggtaaaacttcgccaactcgacaaacttggcagcatactcagtca 11075  T
Q  432 cagacatgtatccttgcttcagctcaaggaatt 464  Q
    ||||||||| ||||||||||| |||||||||||    
T  11076 cagacatgtttccttgcttcaactcaaggaatt 11108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 753 - 883
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| ||||||||||| || || ||||||||| |||| | ||||||||| ||||| ||||||||||| ||||| |||||||||||||||||  | |    
T  753 ccattctcgaacttgatgcatttcgagaactcagcaatctcagcagtgtagtgtggatagaactttgccaactccacgaacttggcagcatactcgatca 852  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    || |||||| ||||||||| | |||||||||    
T  853 catacatgtttccttgctttaactcaaggaa 883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 59; Significance: 8e-25; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 17772 - 17902
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| ||||||||||| || || ||||||| |||||| | |   |||||| |||| ||||||||||| |||| |||||||||||||||||| || |    
T  17772 ccattctcgaacttgatgcatttcgacaactcaggagtctcagcaacatagtgcagatagaactttgccaactccaaaaacttggcagcatactcggtca 17871  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    ||||||||| ||||||||||||||| |||||    
T  17872 cagacatgtttccttgcttcagctctaggaa 17902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 335 - 462
Target Start/End: Original strand, 4036 - 4163
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||| | ||| |||||||| || |||||||  |  ||||||||||||||||||||||| || ||||    
T  4036 ttctcgaacttgatgcatctcgagaactcagcattctcagcagtatagtgcgggtagaactttgatagctccacaaacttggcagcatactctgtcacag 4135  T
Q  435 acatgtatccttgcttcagctcaaggaa 462  Q
    |||||| ||||||||||| ||| |||||    
T  4136 acatgtttccttgcttcaactcgaggaa 4163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 332 - 429
Target Start/End: Original strand, 3561 - 3658
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagt 429  Q
    ||||||||||| ||||||||||| || |||||||||||||| | |||||| |||||||||||||| ||||  ||||||||||| ||||||||||||||    
T  3561 ccattctcaaatttgatgcacttggagaactcagcagtctcagcagtgtattgcggataaaacttagccagctccacaaactttgcagcatactcagt 3658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 313 - 426
Target Start/End: Original strand, 2344 - 2457
Alignment:
Q  313 cttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaac 412  Q
    |||||| |||||||  || |||||||||||||| |||||||| || || ||||||||||||| ||||||||| ||||||||||| ||||  |||||||||    
T  2344 cttgatctcagcacgcaagccattctcaaacttaatgcacttggagaattcagcagtctctgcagtgtagtgtggataaaacttagccagctccacaaac 2443  T
Q  413 ttggcagcatactc 426  Q
    || |||||||||||    
T  2444 ttagcagcatactc 2457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 303 - 428
Target Start/End: Original strand, 507 - 632
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||| ||||| ||||| ||||| |  || |||||||| |||||||| || || |||||||| |||||||||| |||||| ||||||||||||||  ||||    
T  507 caatcgcccttttgatctcagcccgcaatccattctcgaacttgatacaattcgaaaactcggcagtctctgcagtgtaatgcggataaaacttaaccaa 606  T
Q  403 ttccacaaacttggcagcatactcag 428  Q
    ||||||||||||||| ||||||||||    
T  607 ttccacaaacttggcggcatactcag 632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 341 - 462
Target Start/End: Complemental strand, 7462 - 7341
Alignment:
Q  341 aacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacagacatgt 440  Q
    ||||||||||| || || |||||||||||| | | ||  ||||| || || ||||||||||| ||||| ||||||||||||||||| || ||||||||||    
T  7462 aacttgatgcatttcgagaactcagcagtcccagcagcatagtgtgggtagaactttgccaactccacgaacttggcagcatactctgtcacagacatgt 7363  T
Q  441 atccttgcttcagctcaaggaa 462  Q
     |||||||||||||||||||||    
T  7362 ttccttgcttcagctcaaggaa 7341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 303 - 395
Target Start/End: Original strand, 19981 - 20073
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaact 395  Q
    ||||||||||||| || ||||||   || || |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19981 caattgccctcttaatctcagcatgcaaaccgttctcaaatttgatacactttgaaaactcagcagtctctggagtgtagtgcggataaaact 20073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 332 - 440
Target Start/End: Complemental strand, 16301 - 16193
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||||||||| || ||||| || || ||||||||||| | ||||||||| ||||||||||| ||||||||||||||||| ||||||||||| || |    
T  16301 ccattctcaaacttaatacacttggagaattcagcagtctcagcagtgtagtgtggataaaacttagccaattccacaaacttagcagcatactcggtca 16202  T
Q  432 cagacatgt 440  Q
    | |||||||    
T  16201 ccgacatgt 16193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 358 - 462
Target Start/End: Original strand, 171757 - 171861
Alignment:
Q  358 aaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctca 457  Q
    ||||||||||||||| | ||  || |||||||| ||||||||||| ||||||||||||||||||||||| || ||||||||||  |||||||||| ||||    
T  171757 aaactcagcagtctcagcagcataatgcggatagaactttgccaactccacaaacttggcagcatactctgtcacagacatgttcccttgcttcaactca 171856  T
Q  458 aggaa 462  Q
    |||||    
T  171857 aggaa 171861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 332 - 464
Target Start/End: Complemental strand, 139302 - 139170
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| |||||||||||  | || ||||||||| |||| | | | ||||| || || ||||||||||||||||| |||||| |||||||||| || |    
T  139302 ccattctcgaacttgatgcatctcgagaactcagcattctcagcaatatagtgtgggtagaactttgccaattccacgaacttgtcagcatactccgtca 139203  T
Q  432 cagacatgtatccttgcttcagctcaaggaatt 464  Q
    || |||||| |||||||||||||||||||||||    
T  139202 catacatgtttccttgcttcagctcaaggaatt 139170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 392 - 464
Target Start/End: Original strand, 521 - 593
Alignment:
Q  392 aactttgccaattccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaatt 464  Q
    ||||||| ||||||||| ||||||||| ||||||| || |||||||||| ||||||||| |||||||||||||    
T  521 aactttgtcaattccacgaacttggcaccatactccgtcacagacatgtttccttgctttagctcaaggaatt 593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 303 - 454
Target Start/End: Complemental strand, 18080 - 17929
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||| | ||| || |||||||  || ||||||||||||||||||||||| |||||  ||||||||||   | |||||||||||||||||||| ||||    
T  18080 caattgctcgcttaatctcagcacgcaagccattctcaaacttgatgcacttcgaaaatgcagcagtctcattattgtagtgcggataaaactttaccaa 17981  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagc 454  Q
     ||||||||||| |||| |||||| || || ||||| |  ||||||||||||    
T  17980 ctccacaaacttagcagtatactctgtcactgacatatcaccttgcttcagc 17929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1423 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold1423
Description:

Target: scaffold1423; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 303 - 401
Target Start/End: Complemental strand, 99 - 1
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgcca 401  Q
    ||||||||||||| |  |||||||  || || |||||||| ||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  99 caattgccctcttaaactcagcacgcaaaccgttctcaaatttgatacactttgaaaaatcagcagtctctggagtatagtgcggataaaactttgcca 1  T

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Target: scaffold0018 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 303 - 429
Target Start/End: Complemental strand, 23019 - 22893
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||| ||||||||||| |||||||  || ||||| ||||||||||||||||| || ||||||||| |||| |  ||||| || ||||||||||| |||||    
T  23019 caatggccctcttgatctcagcacgcaagccattttcaaacttgatgcacttggagaactcagcaatctcagctgtgtaatgtggataaaacttagccaa 22920  T
Q  403 ttccacaaacttggcagcatactcagt 429  Q
     ||||||||||| |||||||| |||||    
T  22919 ctccacaaactttgcagcatattcagt 22893  T

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Target: scaffold0018; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 332 - 429
Target Start/End: Complemental strand, 9043 - 8945
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcgga-taaaactttgccaattccacaaacttggcagcatactcagt 429  Q
    ||||||||||||||||||||||| || |||| ||||||||| | ||||||||| ||| |||||||| ||||  ||||||||||| |||||||| |||||    
T  9043 ccattctcaaacttgatgcacttggagaacttagcagtctcagtagtgtagtgaggattaaaacttagccagctccacaaactttgcagcatattcagt 8945  T

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Target: scaffold0266 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 303 - 440
Target Start/End: Original strand, 17220 - 17357
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||| ||||||||||| ||||| |  || ||||| |||||||||||||| || || |||||||||||||| | ||| ||||| ||||||||||| || |     
T  17220 caatagccctcttgatatcagctctcaaaccattttcaaacttgatgcatttggagaactcagcagtctccgcagtatagtgaggataaaacttagcgag 17319  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgt 440  Q
    |||||||||| | ||||||||||| || ||||||||||    
T  17320 ttccacaaacctcgcagcatactccgtcacagacatgt 17357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 54; Significance: 8e-22; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 313 - 462
Target Start/End: Original strand, 6704 - 6853
Alignment:
Q  313 cttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaac 412  Q
    |||||| ||| ||| ||| || |||||||| ||||||||||| || |||||||||||||| | ||||||||||||||||||||| || |  |||| | ||    
T  6704 cttgatatcaacacgtaagccgttctcaaatttgatgcacttggagaactcagcagtctcggtagtgtagtgcggataaaacttagctagctccatatac 6803  T
Q  413 ttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    |  |||||||||||||| || ||||| | | |||||||||| ||||||||    
T  6804 tctgcagcatactcagtcactgacatatttgcttgcttcaggtcaaggaa 6853  T

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Target: scaffold0074; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 440
Target Start/End: Original strand, 15663 - 15792
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| |  || |||||||||||||| || || || || || ||||| ||||| | ||| || || || || ||||| || | ||||||||    
T  15663 ctcttgatgtcagctctcaagccattctcaaactttatacatttggagaattcagctgtctcagcagtataatgagggtagaacttagcaagttccacaa 15762  T
Q  411 acttggcagcatactcagtaacagacatgt 440  Q
    |||| ||||||||||| || ||||||||||    
T  15763 actttgcagcatactctgtgacagacatgt 15792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 308 - 459
Target Start/End: Complemental strand, 1138 - 987
Alignment:
Q  308 gccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattcca 407  Q
    ||||||||||| || ||||  || ||||||||||| ||||||||||| || |||||||  ||||| | |||||||||||||||||| || ||||  || |    
T  1138 gccctcttgatctcggcacgcaagccattctcaaatttgatgcacttggagaactcagttgtctcagcagtgtagtgcggataaaatttagccagctcta 1039  T
Q  408 caaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaag 459  Q
    ||||||| || |||||||| || || |||||||  || ||||||||||||||    
T  1038 caaactttgccgcatactcggtcactgacatgtcaccctgcttcagctcaag 987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 383 - 462
Target Start/End: Complemental strand, 15229 - 15150
Alignment:
Q  383 tgcggataaaactttgccaattccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    |||||||||||||||||||| || ||||||||||||||||||| ||| ||  |||||| |||||||||||||||||||||    
T  15229 tgcggataaaactttgccaactcaacaaacttggcagcatactaagtcacgaacatgtttccttgcttcagctcaaggaa 15150  T

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Target: scaffold0412; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 332 - 368
Target Start/End: Complemental strand, 15271 - 15235
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcag 368  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  15271 ccattctcgaacttgatgcactttgagaactcagcag 15235  T

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Target: scaffold0055 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 335 - 462
Target Start/End: Original strand, 22859 - 22986
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||||| ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || ||||    
T  22859 ttctcgaacttgatgcatctcgagaactcagcattctctgcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacag 22958  T
Q  435 acatgtatccttgcttcagctcaaggaa 462  Q
    |||||| |||||||||||  ||||||||    
T  22959 acatgtttccttgcttcaattcaaggaa 22986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 335 - 462
Target Start/End: Original strand, 7848 - 7975
Alignment:
Q  335 ttctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacag 434  Q
    ||||| |||||||||||  | || ||||||||| |||||| ||| ||||||||||| ||||| | ||  ||||| ||||||||||||||||| || ||||    
T  7848 ttctcgaacttgatgcatctcgagaactcagcattctctgcagtatagtgcggatagaacttagacagctccacgaacttggcagcatactctgtcacag 7947  T
Q  435 acatgtatccttgcttcagctcaaggaa 462  Q
    |||||| |||||||||||  ||||||||    
T  7948 acatgtttccttgcttcaattcaaggaa 7975  T

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Target: scaffold0546 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 491 - 621
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| |||||||||||  | || |||||||||||||| | ||  ||||  || || ||||||||||| ||||| ||||||||||||||||| || |    
T  491 ccattctcgaacttgatgcatgtcgagaactcagcagtctcagcagcatagttggggtagaactttgccaactccacgaacttggcagcatactctgtta 590  T
Q  432 cagacatgtatccttgcttcagctcaaggaa 462  Q
    |||||||||  ||||| ||||||||||||||    
T  591 cagacatgttcccttggttcagctcaaggaa 621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 313 - 459
Target Start/End: Original strand, 442245 - 442391
Alignment:
Q  313 cttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaac 412  Q
    |||||| |||||||  || ||||||||||||||||||||||| || ||| ||| |||||| | ||||||||| ||||||||||| || |  || ||||||    
T  442245 cttgatctcagcacgcaaaccattctcaaacttgatgcacttggagaacccagtagtctcagcagtgtagtgtggataaaacttagctagctctacaaac 442344  T
Q  413 ttggcagcatactcagtaacagacatgtatccttgcttcagctcaag 459  Q
    || |||||||||||||| || ||| | |  || ||||||||||||||    
T  442345 tttgcagcatactcagtcactgacttatcaccctgcttcagctcaag 442391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 303 - 464
Target Start/End: Complemental strand, 9843 - 9682
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||| |||||| |||||||  || ||| | ||||| ||||||||||| |||||||| ||| |||| | ||||||||||||||||||||| ||||     
T  9843 caattgcccgcttgatctcagcacgcaagccactttcaaatttgatgcacttggaaaactcggcattctcagcagtgtagtgcggataaaacttagccag 9744  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaatt 464  Q
     |||| |||||| |||||||| || |  || |||||||  || ||||||| ||| |||||||    
T  9743 ctccataaactttgcagcatagtcggacactgacatgtcaccctgcttcaactccaggaatt 9682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 311 - 456
Target Start/End: Original strand, 6395 - 6540
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| |  || ||||||||||||||||| ||||| || |||||||| |||||||  || ||||| || || ||||| || | ||||||||    
T  6395 ctcttgatgtcagctctcaaaccattctcaaacttgatacacttggagaactcagctgtctctgaggtatagtgagggtagaacttagcaagttccacaa 6494  T
Q  411 acttggcagcatactcagtaacagacatgtatccttgcttcagctc 456  Q
    |||| ||||||||||| ||||||||||| |  || |||||||||||    
T  6495 actttgcagcatactctgtaacagacatatccccctgcttcagctc 6540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 11350 - 11508
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||| || ||||| |||| || ||| || ||||| || | ||| || || |||||||||| || ||||| ||| || || |||||||||||||||||    
T  11350 caattgctcttttgatctcagtacgtaaaccgttctcgaattggatacatttcgaaaactcagaag-ctctgcagtataatggggataaaactttgccaa 11448  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    |||||| ||||||||||||||||  || |  ||||||| |||||||||||||| ||||||    
T  11449 ttccacgaacttggcagcatactttgtcattgacatgtttccttgcttcagctaaaggaa 11508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 332 - 438
Target Start/End: Complemental strand, 30720 - 30614
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||||||||| |||||||| || |||||||||||||| | |||||| || |||||||| || || |  ||||||||||| |||||||||||||| |    
T  30720 ccattctcaaactttatgcacttggagaactcagcagtctcggcagtgtaatgtggataaaatttagcaagctccacaaactttgcagcatactcagtca 30621  T
Q  432 cagacat 438  Q
    | |||||    
T  30620 ctgacat 30614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 311 - 452
Target Start/End: Original strand, 157 - 298
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| |  || ||||||||||||||||| ||||| || |||| ||| |||||||  ||||| || || ||||||||||| | ||| ||||    
T  157 ctcttgatgtcagctctcaagccattctcaaacttgatacacttagagaactaagctgtctctgccgtgtaatgagggtaaaactttgcaagttctacaa 256  T
Q  411 acttggcagcatactcagtaacagacatgtatccttgcttca 452  Q
    |||| |||||||||||  |||||||||| |  ||||||||||    
T  257 actttgcagcatactctataacagacatatccccttgcttca 298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 389 - 462
Target Start/End: Complemental strand, 1647 - 1574
Alignment:
Q  389 taaaactttgccaattccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    |||||||| |||||||||||||||||||||||||||||| | || ||||| |  ||||||||||||||||||||    
T  1647 taaaacttagccaattccacaaacttggcagcatactcattcactgacatattcccttgcttcagctcaaggaa 1574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 389 - 462
Target Start/End: Complemental strand, 4511 - 4438
Alignment:
Q  389 taaaactttgccaattccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    |||||||| |||||||||||||||||||||||||||||| | || ||||| |  ||||||||||||||||||||    
T  4511 taaaacttagccaattccacaaacttggcagcatactcattcactgacatattcccttgcttcagctcaaggaa 4438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 332 - 429
Target Start/End: Complemental strand, 14695 - 14598
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagt 429  Q
    ||||||||||||||||||||||| || ||||||||||| || | ||| ||||| |||||||| || ||||  ||||||||||| |||||||| |||||    
T  14695 ccattctcaaacttgatgcacttggagaactcagcagtatcagcagtatagtgtggataaaatttagccagctccacaaactttgcagcatattcagt 14598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 303 - 459
Target Start/End: Original strand, 5671 - 5827
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||| |||| |||||| |||||||   | |||||| |||| ||||||||||| | |||||||||||||||   |||||||||||||||||| || ||||     
T  5671 caatggcccacttgatctcagcacgcgagccattcacaaatttgatgcacttggcaaactcagcagtctcatcagtgtagtgcggataaaatttagccag 5770  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaag 459  Q
     ||| ||||||| |  |||||||| || || |||||||  || ||||||||||||||    
T  5771 ctccccaaactttgtcgcatactcggtcaccgacatgtcaccctgcttcagctcaag 5827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 303 - 414
Target Start/End: Original strand, 11611 - 11722
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||| |||||| |||||||  || ||||| ||||| ||||||||||| || |||||| ||||||| | |||||||||| ||||||||||  |||     
T  11611 caattgcccgcttgatctcagcacacaagccattatcaaatttgatgcacttagagaactcaacagtctcagcagtgtagtgcagataaaacttaaccag 11710  T
Q  403 ttccacaaactt 414  Q
     |||||||||||    
T  11711 ctccacaaactt 11722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 320 - 419
Target Start/End: Original strand, 19247 - 19346
Alignment:
Q  320 tcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcag 419  Q
    ||||||| ||| || ||||| || ||||| ||||| ||||||||| ||||||||| ||| || |||||||||||||||| ||| ||||| ||||||||||    
T  19247 tcagcacgtaaaccgttctcgaatttgatacacttcgaaaactcaacagtctctgcagtataatgcggataaaactttgtcaactccacgaacttggcag 19346  T

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Target: scaffold0148 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 465
Target Start/End: Original strand, 2611 - 2744
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    ||||||||||| || |||||||| ||||| ||||| |||||   | | || |||| |||||||||| |||| ||||||||||| ||||||||||| || |    
T  2611 ccattctcaaatttaatgcacttagaaaattcagctgtctcatcattataatgcgaataaaacttttccaactccacaaacttagcagcatactccgtca 2710  T
Q  432 cagacatgtatccttgcttcagctcaaggaattg 465  Q
    | ||||| |  |||||||||||||| || |||||    
T  2711 ccgacatatcaccttgcttcagctctagaaattg 2744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 332 - 456
Target Start/End: Complemental strand, 4703 - 4579
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||||||||| |||||||| || |||||||||||||| |  ||||| || ||||||||||| || |  |||| |||||| |||||||| || || |    
T  4703 ccattctcaaactttatgcacttggagaactcagcagtctcagcggtgtaatgtggataaaacttagcaagctccataaactttgcagcatattctgtta 4604  T
Q  432 cagacatgtatccttgcttcagctc 456  Q
    | ||||| | ||| |||||||||||    
T  4603 ctgacatatctccctgcttcagctc 4579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 303 - 423
Target Start/End: Original strand, 512 - 632
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    ||||||||| |||||| |||||||  || ||| | ||||| ||||||||||| |||||||| ||  |||| | |||||||||||||||||| || ||||     
T  512 caattgcccgcttgatctcagcacgcaagccactttcaaatttgatgcacttggaaaactcggcgttctcagtagtgtagtgcggataaaagttagccag 611  T
Q  403 ttccacaaacttggcagcata 423  Q
     |||| |||||| ||||||||    
T  612 ctccataaactttgcagcata 632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 303 - 438
Target Start/End: Original strand, 70691 - 70826
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||| ||||||||||| ||||| |  |  ||||| |||||||||||||| || || |||||||| ||||| | ||| ||||| |||||||| ||||| |     
T  70691 caatagccctcttgatatcagctctcaggccattttcaaacttgatgcatttggagaactcagctgtctccgcagtatagtgtggataaaattttgcaag 70790  T
Q  403 ttccacaaacttggcagcatactcagtaacagacat 438  Q
     ||||||||||| ||| |||||||||| || |||||    
T  70791 ctccacaaacttagcaacatactcagttaccgacat 70826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0457 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 462
Target Start/End: Complemental strand, 13767 - 13616
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| |  |||||||||||||||||||| ||||| || |||||||| ||||| | | |||| || ||||| ||  | || |  |||||||    
T  13767 ctcttgatgtcagccctcaacccattctcaaacttgatacacttggagaactcagctgtctccgcactgtaatgaggatagaatgtggcaagctccacaa 13668  T
Q  411 acttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaa 462  Q
    |||| ||||||||||| || ||||||||||  || ||||||| ||| |||||    
T  13667 actttgcagcatactctgtgacagacatgtcaccctgcttcaactccaggaa 13616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 438
Target Start/End: Original strand, 34928 - 35055
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| | ||| |||||||||||||| || || || || |||||||| ||||| | ||| ||||| ||||| ||||| || | ||||| ||    
T  34928 ctcttgatatcagctcttaaaccattctcaaacttaatacatttggagaactcagctgtctccgcagtatagtgaggatagaacttagcaagttccataa 35027  T
Q  411 acttggcagcatactcagtaacagacat 438  Q
    |||| |||||||||||  ||||||||||    
T  35028 acttcgcagcatactctataacagacat 35055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 383 - 450
Target Start/End: Original strand, 424962 - 425029
Alignment:
Q  383 tgcggataaaactttgccaattccacaaacttggcagcatactcagtaacagacatgtatccttgctt 450  Q
    |||||||||||||| || || || |||||||||||||||||||||||  ||||||||| |||||||||    
T  424962 tgcggataaaacttcgctaactcaacaaacttggcagcatactcagtctcagacatgtttccttgctt 425029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 438
Target Start/End: Original strand, 203972 - 204099
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| |  || |||||||||||||| || || || || || ||||| ||||| | ||| ||||| || || |||||| | | ||||||||    
T  203972 ctcttgatatcagctctcaagccattctcaaactttatacatttggagaattcagctgtctccgcagtatagtgagggtagaactttacaagttccacaa 204071  T
Q  411 acttggcagcatactcagtaacagacat 438  Q
    |||| ||||||||||||  |||||||||    
T  204072 actttgcagcatactcaacaacagacat 204099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0947 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0947
Description:

Target: scaffold0947; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 311 - 456
Target Start/End: Complemental strand, 1262 - 1117
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| |  || ||||||||||||||||| ||||| || |||||||  ||||| |  || || || || || ||||| || | ||||||||    
T  1262 ctcttgatgtcagctctcaagccattctcaaacttgatacacttggagaactcagttgtctccgcggtataatgagggtagaacttagcaagttccacaa 1163  T
Q  411 acttggcagcatactcagtaacagacatgtatccttgcttcagctc 456  Q
    |||| ||||||||||| ||||||||||| |  || |||||||||||    
T  1162 actttgcagcatactctgtaacagacatatccccctgcttcagctc 1117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 311 - 464
Target Start/End: Complemental strand, 5970 - 5817
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| |  || |||||||||||||| || || || || || ||||| ||||| |  || ||||| || || |||||||| | ||||||||    
T  5970 ctcttgatatcagctctcaagccattctcaaactttattcatttggagaattcagctgtctccgcggtatagtgtgggtagaactttgcaagttccacaa 5871  T
Q  411 acttggcagcatactcagtaacagacatgtatccttgcttcagctcaaggaatt 464  Q
    |||| ||||||||||||  ||||||||| |  || ||||||||||| |||||||    
T  5870 actttgcagcatactcaacaacagacatatcaccctgcttcagctccaggaatt 5817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 303 - 440
Target Start/End: Original strand, 6020 - 6157
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||| ||||||||||| ||||| |  || ||||| |||||||| || || || || |||||||||||||| | | | ||||| ||||| ||||| || |     
T  6020 caatagccctcttgatatcagctctcaaaccattttcaaactttatacatttggagaactcagcagtctccgcaatatagtgaggatagaacttagcgag 6119  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgt 440  Q
    |||||||||| | ||||||||||| || ||||||||||    
T  6120 ttccacaaacctcgcagcatactccgtcacagacatgt 6157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 311 - 440
Target Start/End: Complemental strand, 65035 - 64906
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| |  || |||||||||||||| || || || || |||||||| ||||| | ||| ||||| ||||||||||| || | ||||||||    
T  65035 ctcttgatatcagccctcaatccattctcaaacttaatacatttggagaactcagctgtctccgcagtatagtgaggataaaacttggcgagttccacaa 64936  T
Q  411 acttggcagcatactcagtaacagacatgt 440  Q
    ||||  || ||||||| || ||||||||||    
T  64935 acttcacatcatactctgtgacagacatgt 64906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 438
Target Start/End: Complemental strand, 4025 - 3890
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaa-aactcagcagtctctggagtgtagtgcggataaaactttgcca 401  Q
    |||| ||||| ||||| ||||| | ||  ||||| ||||||||||| || |||||| |||||||||||||| | ||||||||| ||||| || ||||| |    
T  4025 caatagcccttttgatatcagctcttaggccattttcaaacttgataca-tttgaagaactcagcagtctccgtagtgtagtgtggatagaattttgcaa 3927  T
Q  402 attccacaaacttggcagcatactcagtaacagacat 438  Q
      ||||||||||| || ||||||||||| || |||||    
T  3926 gctccacaaactttgctgcatactcagtcaccgacat 3890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 452
Target Start/End: Original strand, 30138 - 30258
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    ||||| || ||||||||||  || || |||||||||||||| | ||| ||||| || ||||| ||||| |  ||| ||||||| || ||||||||||| |    
T  30138 ccattttccaacttgatgcgtttagagaactcagcagtctcagcagtatagtgtgggtaaaattttgcaagctccgcaaacttagctgcatactcagtca 30237  T
Q  432 cagacatgtatccttgcttca 452  Q
    ||||||||| ||| |||||||    
T  30238 cagacatgtctccctgcttca 30258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1032 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 438
Target Start/End: Complemental strand, 528 - 401
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| |  || |||||||| |||||||| || || || |||||||| ||||| | ||| ||||| || || |||||||| | ||||||||    
T  528 ctcttgatgtcagctctcaaaccattctcgaacttgatacatttggagaactcagctgtctccgcagtatagtgaggctagaactttgcaagttccacaa 429  T
Q  411 acttggcagcatactcagtaacagacat 438  Q
    |||| |||||||| || ||||| |||||    
T  428 acttagcagcatattctgtaactgacat 401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 303 - 438
Target Start/End: Original strand, 50688 - 50823
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||| ||||||||||| ||||| |  |  ||||||||||||||| |||| || || |||||||| ||||| | ||| || || |||||||||||||| |     
T  50688 caatagccctcttgatatcagctctcaggccattctcaaacttggtgcatttggagaactcagctgtctccgcagtataatgaggataaaactttgcaag 50787  T
Q  403 ttccacaaacttggcagcatactcagtaacagacat 438  Q
     || |||||||| || |||||||| || ||||||||    
T  50788 ctctacaaacttagctgcatactcggttacagacat 50823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 423
Target Start/End: Original strand, 26072 - 26163
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcata 423  Q
    |||||||||||||| |||||||| || ||||||||| |||| |  ||||| || ||||||||||| || |  ||||||||||| ||||||||    
T  26072 ccattctcaaactttatgcacttagagaactcagcaatctcagcggtgtaatgtggataaaacttagcaagctccacaaactttgcagcata 26163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 36; Significance: 0.00000000004; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 438
Target Start/End: Original strand, 30215 - 30342
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| |  || |||||||||||||| || || || || |||||||| ||||| | ||| || || || || ||||| || | ||||||||    
T  30215 ctcttgatatcagctctcaaaccattctcaaactttatacatttggataactcagctgtctccgcagtataatgagggtagaacttagcaagttccacaa 30314  T
Q  411 acttggcagcatactcagtaacagacat 438  Q
    |||| ||||||||||| |||||||||||    
T  30315 acttcgcagcatactctgtaacagacat 30342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 439
Target Start/End: Complemental strand, 48893 - 48765
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| |  || |||||||||||||| || ||||| || || ||||| ||||| |  || ||||| || || |||||||| | ||||||||    
T  48893 ctcttgatgtcagctctcaagccattctcaaactttatacacttggagaattcagctgtctccgcggtatagtgagggtagaactttgcaagttccacaa 48794  T
Q  411 acttggcagcatactcagtaacagacatg 439  Q
    ||||  |||||||||||  ||||||||||    
T  48793 acttcacagcatactcaacaacagacatg 48765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 439
Target Start/End: Complemental strand, 57927 - 57799
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| |  || |||||||||||||| || ||||| || || ||||| ||||| |  || ||||| || || |||||||| | ||||||||    
T  57927 ctcttgatgtcagctctcaagccattctcaaactttatacacttggagaattcagctgtctccgcggtatagtgagggtagaactttgcaagttccacaa 57828  T
Q  411 acttggcagcatactcagtaacagacatg 439  Q
    ||||  |||||||||||  ||||||||||    
T  57827 acttcacagcatactcaacaacagacatg 57799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 439
Target Start/End: Complemental strand, 64315 - 64187
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| |  || |||||||||||||| || ||||| || || ||||| ||||| |  || ||||| || || |||||||| | ||||||||    
T  64315 ctcttgatgtcagctctcaagccattctcaaactttatacacttggagaattcagctgtctccgcggtatagtgagggtagaactttgcaagttccacaa 64216  T
Q  411 acttggcagcatactcagtaacagacatg 439  Q
    ||||  |||||||||||  ||||||||||    
T  64215 acttcacagcatactcaacaacagacatg 64187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 303 - 438
Target Start/End: Original strand, 52234 - 52369
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||| |||| |||||| ||||| |  || ||||| |||||||| || || || ||  ||||||||||||| | ||| ||||| |||||||| ||||| |     
T  52234 caatagcccgcttgatatcagctctcaaaccattttcaaactttatacatttggagcactcagcagtctccgcagtatagtgtggataaaattttgcaag 52333  T
Q  403 ttccacaaacttggcagcatactcagtaacagacat 438  Q
     ||||||||||| || ||||||||||| ||||||||    
T  52334 ctccacaaacttagctgcatactcagtcacagacat 52369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 438
Target Start/End: Complemental strand, 5594 - 5488
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||||||||| || || || || |||||||| ||||| | ||| || || |||||||||||||| |  || |||||||| ||||||||||| || |    
T  5594 ccattctcaaacttaatacatttggagaactcagcggtctccgcagtataatgaggataaaactttgcaagctctacaaacttcgcagcatactctgtta 5495  T
Q  432 cagacat 438  Q
    |||||||    
T  5494 cagacat 5488  T

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Target: scaffold0405 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 438
Target Start/End: Original strand, 6214 - 6320
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    ||||| |||||||| || || || || ||||||||||||||   ||| ||||| |||||||| ||||| |  ||||||||||| || ||||||||||| |    
T  6214 ccattttcaaactttatacatttggagaactcagcagtctccacagtatagtgtggataaaattttgcaagctccacaaacttagctgcatactcagtca 6313  T
Q  432 cagacat 438  Q
    |||||||    
T  6314 cagacat 6320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 453
Target Start/End: Complemental strand, 4560 - 4418
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| |  || |||||||||||||| || || || || || ||||| ||||| |  || ||||| || || |||||||| | ||||||||    
T  4560 ctcttgatgtcagctctcaagccattctcaaactttatacatttggagaattcagctgtctccgcggtatagtgagggtagaactttgcaagttccacaa 4461  T
Q  411 acttggcagcatactcagtaacagacatgtatccttgcttcag 453  Q
    |||| ||||||||||||  |||||||||||  || ||||||||    
T  4460 actttgcagcatactcaacaacagacatgtcaccctgcttcag 4418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2062 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold2062
Description:

Target: scaffold2062; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 311 - 456
Target Start/End: Complemental strand, 585 - 440
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| | ||| |||||||||||||| || || || || |||||||| ||||| | ||| ||||| || || ||||| || | |||||| |    
T  585 ctcttgatgtcagctcttaaaccattctcaaacttaatacatttggagaactcagctgtctccgcagtatagtgtgggtagaacttagcaagttccacga 486  T
Q  411 acttggcagcatactcagtaacagacatgtatccttgcttcagctc 456  Q
    |||| ||||||||||| |||| | |||| |  || |||||||||||    
T  485 actttgcagcatactctgtaaaacacatatccccctgcttcagctc 440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 311 - 440
Target Start/End: Complemental strand, 8175 - 8046
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| |  || ||||||||||||||||| | ||| || |||||||| |||||    || ||||| || || ||||| || | ||||||||    
T  8175 ctcttgatgtcagctctcaagccattctcaaacttgatactcttggagaactcagctgtctccacggtatagtgggggtagaacttagcaagttccacaa 8076  T
Q  411 acttggcagcatactcagtaacagacatgt 440  Q
    |||| ||||||||||| || ||||||||||    
T  8075 actttgcagcatactctgtgacagacatgt 8046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 311 - 440
Target Start/End: Complemental strand, 18389 - 18260
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| |  || ||||||||||||||||| | ||| || |||||||| |||||    || ||||| || || ||||| || | ||||||||    
T  18389 ctcttgatgtcagctctcaagccattctcaaacttgatactcttggagaactcagctgtctccacggtatagtgggggtagaacttagcaagttccacaa 18290  T
Q  411 acttggcagcatactcagtaacagacatgt 440  Q
    |||| ||||||||||| || ||||||||||    
T  18289 actttgcagcatactctgtgacagacatgt 18260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 332 - 413
Target Start/End: Complemental strand, 28620 - 28539
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaact 413  Q
    |||||||| ||||||||||| || || |||||||||||||| | ||| || || ||||| ||||||||||| ||||| ||||    
T  28620 ccattctcgaacttgatgcatttcgagaactcagcagtctcagaagtataatgtggatagaactttgccaactccacgaact 28539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 311 - 440
Target Start/End: Complemental strand, 98296 - 98167
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| |  || |||||||||||||| || || || || || ||||| ||||| | ||| || || || ||||||||||| | ||||| ||    
T  98296 ctcttgatgtcagctctcaagccattctcaaactttatacatttggagaattcagctgtctccgtagtataatgagggtaaaactttgcaagttccataa 98197  T
Q  411 acttggcagcatactcagtaacagacatgt 440  Q
    |||| ||||||||||| || ||||||||||    
T  98196 acttagcagcatactctgtgacagacatgt 98167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 311 - 456
Target Start/End: Original strand, 263817 - 263962
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| |  || |||||||||||||| || || || || || ||||| ||||| |  || ||||| || || |||||||| | ||||||||    
T  263817 ctcttgatatcagctctcaagccattctcaaactttatacatttggagaattcagctgtctccgcggtatagtgagggtagaactttgcaagttccacaa 263916  T
Q  411 acttggcagcatactcagtaacagacatgtatccttgcttcagctc 456  Q
    |||| ||||||||||||  ||||||||| |  || |||||||||||    
T  263917 actttgcagcatactcaacaacagacatatcaccctgcttcagctc 263962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1600 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1600
Description:

Target: scaffold1600; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 459
Target Start/End: Original strand, 649 - 796
Alignment:
Q  303 caattgccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaa 402  Q
    |||| ||| ||||||| ||| |||  || ||||||||||| ||||||||||| || |||||||||||         |||||||| ||||||||| ||||     
T  649 caatggccatcttgatctcatcacgcaagccattctcaaatttgatgcacttggagaactcagcagt---------gtagtgcgtataaaacttagccag 739  T
Q  403 ttccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctcaag 459  Q
     ||||||||| | | |||||||||||| || ||||| |  || ||||||||||||||    
T  740 ctccacaaacattgtagcatactcagtcactgacatattaccctgcttcagctcaag 796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 452
Target Start/End: Complemental strand, 553 - 433
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    ||||| |||||||| ||||||||||| ||||||| |||||| | ||| || || || ||||| ||||| |  |||||||||||   |||||| ||||| |    
T  553 ccattttcaaacttaatgcactttgagaactcagtagtctcagcagtataatgtgggtaaaattttgcaagctccacaaacttataagcatattcagtta 454  T
Q  432 cagacatgtatccttgcttca 452  Q
    ||||||| | ||| |||||||    
T  453 cagacatatctccctgcttca 433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 456
Target Start/End: Original strand, 2443 - 2567
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||||||||| || || || || || ||||| ||||| |  || ||||| || || |||||||| |||||||||||| | ||||||||||||  ||    
T  2443 ccattctcaaactttatacatttggagaattcagctgtctccgcggtatagtgagggtagaactttgcaaattccacaaaccttgcagcatactcaacaa 2542  T
Q  432 cagacatgtatccttgcttcagctc 456  Q
    |||||||||  |  |||||||||||    
T  2543 cagacatgtcactctgcttcagctc 2567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 456
Target Start/End: Original strand, 3237 - 3361
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| |||||||| || || || |||||||| ||||| |  || ||||| || || |||||||| | |||||||||||| |||||||| || ||||    
T  3237 ccattctctaacttgatacatttggagaactcagctgtctccgcggtatagtgggggtagaactttgcaagttccacaaacttagcagcatattctgtaa 3336  T
Q  432 cagacatgtatccttgcttcagctc 456  Q
    | ||||| |  || |||||||||||    
T  3337 ctgacatatcaccctgcttcagctc 3361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 456
Target Start/End: Complemental strand, 53115 - 52991
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||| |||| ||| ||||| || |||||||| ||||| |  |||||||| || || |||||||| | |||||||||||| ||||||||  | || |    
T  53115 ccattctcgaactcgatacacttagagaactcagctgtctccgcggtgtagtgggggtagaactttgcaagttccacaaactttgcagcatatgctgtga 53016  T
Q  432 cagacatgtatccttgcttcagctc 456  Q
    || ||||||  || |||||||||||    
T  53015 caaacatgtcaccctgcttcagctc 52991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 456
Target Start/End: Original strand, 319915 - 319979
Alignment:
Q  392 aactttgccaattccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctc 456  Q
    |||||||| | |||||||||||| ||||||||||| || ||||||||||  || |||||||||||    
T  319915 aactttgcaagttccacaaacttagcagcatactctgtgacagacatgtcaccctgcttcagctc 319979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1914 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1914
Description:

Target: scaffold1914; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 946 - 827
Alignment:
Q  308 gccctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattcca 407  Q
    ||||||||||| ||||| |  || |||||||||||||| |||||||| || || ||||| ||||| ||||  || || || || |||||||| |  ||||    
T  946 gccctcttgatatcagctctcaagccattctcaaacttaatgcacttggagaattcagctgtctccggagcataatgggggtagaactttgcaagctcca 847  T
Q  408 caaacttggcagcatactca 427  Q
    |||| || ||||||||||||    
T  846 caaattttgcagcatactca 827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 423
Target Start/End: Complemental strand, 727 - 636
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcata 423  Q
    |||||||| ||||| |||||||| || |||||||||||||| |  | ||| || ||||||||||| || |  ||||||||||| ||||||||    
T  727 ccattctcgaactttatgcacttagagaactcagcagtctcagcggcgtaatgtggataaaacttagcaagctccacaaactttgcagcata 636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 438
Target Start/End: Complemental strand, 8734 - 8607
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaa 410  Q
    |||||||| ||||| |  || ||||||||||||||||| || || || ||| |||| || || |  || ||||| || || |||||||| | ||||||||    
T  8734 ctcttgatgtcagctctcaagccattctcaaacttgatacatttggagaacacagctgtgtccgcggtatagtgggggtagaactttgcaagttccacaa 8635  T
Q  411 acttggcagcatactcagtaacagacat 438  Q
    |||| |||||||| || |||||||||||    
T  8634 acttagcagcatattctgtaacagacat 8607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1530 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1530
Description:

Target: scaffold1530; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 456
Target Start/End: Original strand, 1095 - 1241
Alignment:
Q  311 ctcttgatttcagcacctaacccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcgg-ataaaactttgccaattccaca 409  Q
    |||||||| ||||| |  || ||||||||||||||||| || || || |||||||| ||||| |  || ||||| || ||| |||||||||| |||||||    
T  1095 ctcttgatgtcagctctcaagccattctcaaacttgatacatttggagaactcagctgtctccgcggtatagtggggaatagaactttgccagttccaca 1194  T
Q  410 aacttggcagcatactcagtaacagacatgtatccttgcttcagctc 456  Q
    ||||| | |||||| || ||| | ||||| |  || |||||||||||    
T  1195 aacttagtagcatattctgtagctgacatatcaccctgcttcagctc 1241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1517 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1517
Description:

Target: scaffold1517; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 426
Target Start/End: Complemental strand, 1179 - 1085
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactc 426  Q
    ||||| ||||||||||| ||||| || |||||||| ||||| | | |||| || || || ||||| || | |||||||||||| |||||||||||    
T  1179 ccattttcaaacttgatacacttggagaactcagctgtctccgcactgtaatgagggtagaacttagcaagttccacaaacttagcagcatactc 1085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 438
Target Start/End: Original strand, 8169 - 8275
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    ||||| |||||||| ||||||||||| || || |||||||| | ||| || || ||||| || ||||| |  ||||||||||| |||||||||| ||| |    
T  8169 ccattttcaaacttaatgcactttgacaattccgcagtctcagcagtataatgtggatagaattttgcaagctccacaaacttagcagcatacttagtta 8268  T
Q  432 cagacat 438  Q
    | |||||    
T  8269 ccgacat 8275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 438
Target Start/End: Original strand, 116236 - 116342
Alignment:
Q  332 ccattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaa 431  Q
    |||||||||||||| ||||| || || |||||| | ||||| | | | || || ||||| |||||||| | ||| |||||||||||||||||||  ||||    
T  116236 ccattctcaaacttaatgcatttggagaactcaactgtctccgcactataatgaggatagaactttgcaagttctacaaacttggcagcatactttgtaa 116335  T
Q  432 cagacat 438  Q
     ||||||    
T  116336 gagacat 116342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1433 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1433
Description:

Target: scaffold1433; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 438
Target Start/End: Complemental strand, 1002 - 897
Alignment:
Q  333 cattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaac 432  Q
    |||||||||||||||||||||| || |||||||| ||||| | | | || || ||||| |||||||| |  |  |||||||| |||||||| |  |||||    
T  1002 cattctcaaacttgatgcacttggagaactcagctgtctccgcactataatggggatagaactttgcaagctttacaaacttagcagcatatttggtaac 903  T
Q  433 agacat 438  Q
    ||||||    
T  902 agacat 897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 438
Target Start/End: Original strand, 8357 - 8462
Alignment:
Q  333 cattctcaaacttgatgcactttgaaaactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaac 432  Q
    |||||||||||||||||||||| || |||||||| ||||| | | | || || ||||| |||||||| |  |  |||||||| |||||||| |  |||||    
T  8357 cattctcaaacttgatgcacttggagaactcagctgtctccgcactataatggggatagaactttgcaagctttacaaacttagcagcatatttggtaac 8456  T
Q  433 agacat 438  Q
    ||||||    
T  8457 agacat 8462  T

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Target: scaffold0222 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 456
Target Start/End: Original strand, 21405 - 21502
Alignment:
Q  359 aactcagcagtctctggagtgtagtgcggataaaactttgccaattccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctc 456  Q
    |||||||| ||||| |  || ||||| || || |||||||| | |||||||||||| |||||||| || ||||| |||||||  || |||||||||||    
T  21405 aactcagctgtctccgcggtatagtgggggtagaactttgcaagttccacaaacttagcagcatattctgtaactgacatgtcaccctgcttcagctc 21502  T

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Target: scaffold0239 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 392 - 456
Target Start/End: Complemental strand, 9431 - 9367
Alignment:
Q  392 aactttgccaattccacaaacttggcagcatactcagtaacagacatgtatccttgcttcagctc 456  Q
    |||||||| | |||||||||||| ||||||||||||  ||||||||| |  || |||||||||||    
T  9431 aactttgcaagttccacaaactttgcagcatactcaacaacagacatatcaccctgcttcagctc 9367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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