View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF-Insertion-2 (Length: 692)
Name: NF-Insertion-2
Description: NF1241
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF-Insertion-2 |
 | |
|
| [»] scaffold0425 (1 HSPs) |
| |
|
| [»] chr7 (1 HSPs) |
| |
|
| [»] chr4 (1 HSPs) |
| |
|
Alignment Details
Target: chr3 (Bit Score: 631; Significance: 0; HSPs: 31)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 631; E-Value: 0
Query Start/End: Original strand, 8 - 690
Target Start/End: Complemental strand, 5299417 - 5298735
Alignment:
| Q |
8 |
aaatttgtgctagtaatgaaggtgaagtcggttggaaagctttaaaaagattgccaagtacatctttggtggatgaatcgagcatatatggcagagatgg |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5299417 |
aaatttgtgctagtaatgaaggtgaagtcggttggaaagctttaaaaagattgccaagtacatctttggtggatgaatcgagcatatatggcagagatgg |
5299318 |
T |
|
| Q |
108 |
tgacaaagaggaagtaaccaaatttttactttccgacatagatgctggcgatcgtgtaccaataatcagcatggtgggtctaggtggaatgggaaaaacc |
207 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
5299317 |
tgacaaagaggaagtaaccaaatttttactttccgacatagatgctggcgaccgtgtaccaataatcagcatagtgggtctaggtggaatgggaaaaacc |
5299218 |
T |
|
| Q |
208 |
acccttgctcaacttgtgtacaataacaacatgatgcagaaacagtttgaactaaaagcctgggtctatgtttcggaaactttcaatgttgttggactta |
307 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
5299217 |
acccttgctcaacttgtgtacaataacaacatgatacagaaacagtttgaactaaaagcctgggtctatgtttcggaaacttttaatgttgttggactta |
5299118 |
T |
|
| Q |
308 |
ccaaagcaattttgcggtcatttcactctttggctgatggtgaagacttgaatctaccccaacatcaattgcagcagagactaacaggaaagaaatatct |
407 |
Q |
| |
|
||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5299117 |
ccaaagcaattttacggtcatttcactcttcggcagatggtgaagacttgaatctactccaacatcaattgcagcagagactaacaggaaagaaatatct |
5299018 |
T |
|
| Q |
408 |
gcttgttttggatgatgtctggaacggtagtgcggaatgttgggagcgcttactacttccttttaacaatggatctaccggaagtaagattattgtgaca |
507 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5299017 |
gcttgttttggatgatgtctggaacggtagtgcggaatgttgggagcgcttactacttccttttaacaatggatctaccggaagtaagattattgtgacc |
5298918 |
T |
|
| Q |
508 |
acacgtgacaaggaggtagcatcagtcatgaagtccaccaaacttcttcatttgaagcaattggagaagagtgaatgttggagtatgtttatgagacacg |
607 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |
|
|
| T |
5298917 |
acacgtgacaaggaggtagcatcagttatgaagtccaccaaacttcttcatttgaagcaattgaagaagagtgaatgttggagtatgtttgtgagacacg |
5298818 |
T |
|
| Q |
608 |
cttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattggcaagaaaatcgtaggaaagtgtggagggttgcct |
690 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
5298817 |
cttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattggcaagaaaatcgtagaaaagtgtggagggttgcct |
5298735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 15 - 689
Target Start/End: Complemental strand, 5250848 - 5250174
Alignment:
| Q |
15 |
tgctagtaatgaaggtgaagtcggttggaaagctttaaaaagattgccaagtacatctttggtggatgaatcgagcatatatggcagagatggtgacaaa |
114 |
Q |
| |
|
|||||||| |||||||| || |||||||| | ||| | ||||| |||| |||| |||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
5250848 |
tgctagtagtgaaggtggcgttagttggaaacccttagatagatttccaactacagctttggtggatgaatcgagcatatatggtagagatggtgacaag |
5250749 |
T |
|
| Q |
115 |
gaggaagtaaccaaatttttactttccgacatagatgctggcgatcgtgtaccaataatcagcatggtgggtctaggtggaatgggaaaaaccacccttg |
214 |
Q |
| |
|
||||| ||| | |||||||| || |||||| | |||| ||| |||||||||||||||||| |||||||| ||||||||||| || ||||| |||| |
|
|
| T |
5250748 |
gaggagttaattgattttttactgtctgacataaacagtggcaatcatgtaccaataatcagcatagtgggtctcggtggaatgggtaagaccactcttg |
5250649 |
T |
|
| Q |
215 |
ctcaacttgtgtacaataacaacatgatgcagaaacagtttgaactaaaagcctgggtctatgtttcggaaactttcaatgttgttggacttaccaaagc |
314 |
Q |
| |
|
|||| |||| |||||| || ||| ||||||| | || |||||||| ||||| |||||||||||||| |||||||| ||||||||||||| |||||||| |
|
|
| T |
5250648 |
ctcagcttgcgtacaacgaccacaggatgcaggagcattttgaacttaaagcttgggtctatgtttcagaaacttttgatgttgttggactcaccaaagc |
5250549 |
T |
|
| Q |
315 |
aattttgcggtcatttcactctttggctgatggtgaagacttgaatctaccccaacatcaattgcagcagagactaacaggaaagaaatatctgcttgtt |
414 |
Q |
| |
|
|||| || | ||||||||||||| | |||| |||||| || ||||||| |||| ||||| ||| ||||||||||||||| ||||||||||| |||||| |
|
|
| T |
5250548 |
aattatgagctcatttcactcttcaacagatgctgaagagttcaatctactccaatatcaactgcggcagagactaacaggtaagaaatatcttcttgtt |
5250449 |
T |
|
| Q |
415 |
ttggatgatgtctggaacggtagtgcggaatgttgggagcgcttactacttccttttaacaatggatctaccggaagtaagattattgtgacaacacgtg |
514 |
Q |
| |
|
||||||||||||||||| || |||| ||||||||||||||||||||||||||| || | |||||||||| |||||||| |||||||| ||||||||| |
|
|
| T |
5250448 |
ttggatgatgtctggaatgggagtgtggaatgttgggagcgcttactacttcccttatgccatggatctactggaagtaaaattattgttacaacacgta |
5250349 |
T |
|
| Q |
515 |
acaaggaggtagcatcagtcatgaagtccaccaaacttcttcatttgaagcaattggagaagagtgaatgttggagtatgtttatgagacacgcttttca |
614 |
Q |
| |
|
|||||||||| ||||| |||||||||||||||| ||| |||| || ||||| || ||||||||||||||||||||||| ||||||| |||||| | |
|
|
| T |
5250348 |
acaaggaggtggcatctatcatgaagtccaccaaggagcttaatttagagaaattgaaggagagtgaatgttggagtatgtttgtgagacatgcttttta |
5250249 |
T |
|
| Q |
615 |
cggcacaaatgcaagtgaatatccaaatcttgaatcaattggcaagaaaatcgtaggaaagtgtggagggttgcc |
689 |
Q |
| |
|
||| | ||||||||||||||||||||||||||||| ||||| |||||||| |||| ||||||||||||||||| |
|
|
| T |
5250248 |
cggaaggaatgcaagtgaatatccaaatcttgaatctattggtaagaaaattataggcaagtgtggagggttgcc |
5250174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 12 - 692
Target Start/End: Complemental strand, 5268738 - 5268058
Alignment:
| Q |
12 |
ttgtgctagtaatgaaggtgaagtcggttggaaagctttaaaaagattgccaagtacatctttggtggatgaatcgagcatatatggcagagatggtgac |
111 |
Q |
| |
|
||||||||||| |||||||| ||| |||||||| | ||| | |||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
5268738 |
ttgtgctagtagtgaaggtggagttagttggaaacccttagatagattgccaactacatctttggtggatgaatccagcatatatggtagagatggtgac |
5268639 |
T |
|
| Q |
112 |
aaagaggaagtaaccaaatttttactttccgacatagatgctggcgatcgtgtaccaataatcagcatggtgggtctaggtggaatgggaaaaaccaccc |
211 |
Q |
| |
|
|| ||||| ||| ||| |||||||| || |||||||| ||| | | |||||||||||||||||| |||||||| ||||||||||| || ||||||| |
|
|
| T |
5268638 |
aaggaggagttaatcaattttttactgtctgacatagacaagggcaaccatgtaccaataatcagcatagtgggtctcggtggaatgggtaagaccaccc |
5268539 |
T |
|
| Q |
212 |
ttgctcaacttgtgtacaataacaacatgatgcagaaacagtttgaactaaaagcctgggtctatgtttcggaaactttcaatgttgttggacttaccaa |
311 |
Q |
| |
|
|||||||||| ||||||||| || | | ||| || | | ||| ||| ||||||||||||||||||||||||| ||| ||| | | |||||||| || |
|
|
| T |
5268538 |
ttgctcaactcgtgtacaatgaccaaaggatcaaggagaattttaaacataaagcctgggtctatgtttcggaaatttttgatggtctcggacttactaa |
5268439 |
T |
|
| Q |
312 |
agcaattttgcggtcatttcactctttggctgatggtgaagacttgaatctaccccaacatcaattgcagcagagactaacaggaaagaaatatctgctt |
411 |
Q |
| |
|
||||||| || |||||||| ||| || || |||||||||||||||||| ||| ||||||||| ||||||||| |||||||||| |||||||| ||||| |
|
|
| T |
5268438 |
agcaattctgaggtcatttgacttttcagcagatggtgaagacttgaatttactccaacatcagttgcagcagggactaacaggcaagaaatacttgctt |
5268339 |
T |
|
| Q |
412 |
gttttggatgatgtctggaacggtagtgcggaatgttgggagcgcttactacttccttttaacaatggatctaccggaagtaagattattgtgacaacac |
511 |
Q |
| |
|
||||||||||||||||||| || |||| |||||||||||||||||| ||||||| || | |||||||| | |||||||| |||||||||||||||| |
|
|
| T |
5268338 |
tttttggatgatgtctggaatgggagtgaagaatgttgggagcgcttattacttcccttattccatggatctgctggaagtaaaattattgtgacaacac |
5268239 |
T |
|
| Q |
512 |
gtgacaaggaggtagcatcagtcatgaagtccaccaaacttcttcatttgaagcaattggagaagagtgaatgttggagtatgtttatgagacacgcttt |
611 |
Q |
| |
|
|| ||| | |||||||| | |||||||| ||||||||| ||| |||| || || || || ||||||||||||||||||||||| || |||| ||||| |
|
|
| T |
5268238 |
gtaacatgaaggtagcaactgtcatgaactccaccaaaaaccttaatttagagaaactgaaggagagtgaatgttggagtatgtttgtgcgacatgcttt |
5268139 |
T |
|
| Q |
612 |
tcacggcacaaatgcaagtgaatatccaaatcttgaatcaattggcaagaaaatcgtaggaaagtgtggagggttgccttt |
692 |
Q |
| |
|
||| || | |||||||||||||| |||||||||||||||||||| |||||||| |||| |||||||||||||| ||||| |
|
|
| T |
5268138 |
tcatggaagcaatgcaagtgaatacccaaatcttgaatcaattggaaagaaaatagtagataagtgtggagggttaccttt |
5268058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 13 - 686
Target Start/End: Original strand, 4388285 - 4388964
Alignment:
| Q |
13 |
tgtgctagtaatgaaggtgaagtcggttggaaagctttaaaaagattgccaagtacatctttggtggatgaatcgagcatatatggcagagatggtgaca |
112 |
Q |
| |
|
|||||||||| |||||||| | || |||||||| | || | |||||| |||| ||||||||||||||||| ||||||||||||||| ||| | ||||||| |
|
|
| T |
4388285 |
tgtgctagtagtgaaggtggactcagttggaaacccttgataagatttccaactacatctttggtggatggatcgagcatatatggtagaaacggtgaca |
4388384 |
T |
|
| Q |
113 |
aagaggaagtaaccaaatttttactttccgacatagatgctggcgatcgtgtaccaataatcagcatggtgggtctaggtggaatgggaaaaaccaccct |
212 |
Q |
| |
|
||||||| || ||| |||||||| || |||||||| ||| | | ||||||||||||||||| |||||||| ||||||||||| || ||||| || |
|
|
| T |
4388385 |
aagaggagttagtcaactttttactgtctgacatagacagcggcaaccaagtaccaataatcagcatagtgggtctcggtggaatgggtaagaccactct |
4388484 |
T |
|
| Q |
213 |
tgctcaacttgtgtacaataacaacatgatgcagaaacagtttgaactaaaagcctgggtctatgtttcggaaactttcaatgttgttggacttaccaaa |
312 |
Q |
| |
|
|||||| |||||||||||| || || |||| | | || |||||||| ||||| |||||||| ||||| |||||||| |||||||||||||||||||| |
|
|
| T |
4388485 |
tgctcagcttgtgtacaatgaccgcaggatgaaagagcattttgaacttaaagcttgggtctacgtttcagaaacttttgatgttgttggacttaccaaa |
4388584 |
T |
|
| Q |
313 |
gcaattttgcggtcatttcactctttggctgatggtgaagacttgaatctaccccaacatcaattgcagcagagactaacaggaaagaaatatctgcttg |
412 |
Q |
| |
|
|||||| || ||||||||||||||| | ||| |||||| || ||||| | |||||||||||||||||| | |||||| || ||||||||| |||||| |
|
|
| T |
4388585 |
gcaattctgaggtcatttcactcttcaacacatgctgaagagtttaatctgctccaacatcaattgcagcacaaactaactggtaagaaatatttgcttg |
4388684 |
T |
|
| Q |
413 |
ttttggatgatgtctggaacggtagtgcggaatgttgggagcgcttactacttccttttaacaatggatctac------cggaagtaagattattgtgac |
506 |
Q |
| |
|
|||| |||||||||||||| || | || |||| |||||||||||||||||||||| | | |||||||||| |||||||| ||||||||||| |
|
|
| T |
4388685 |
ttttagatgatgtctggaatgggaatgaggaaggttgggagcgcttactacttcccctatgccatggatctactggaagtggaagtaaaattattgtgac |
4388784 |
T |
|
| Q |
507 |
aacacgtgacaaggaggtagcatcagtcatgaagtccaccaaacttcttcatttgaagcaattggagaagagtgaatgttggagtatgtttatgagacac |
606 |
Q |
| |
|
||| |||||||||||||||||||| |||||||||||||||| ||| |||| || || || | | |||||||||||||| |||||| ||||||| |
|
|
| T |
4388785 |
aactcgtgacaaggaggtagcatctatcatgaagtccaccaaggagcttaatttagagaaactgaatgaaagtgaatgttggagaatgtttgtgagacat |
4388884 |
T |
|
| Q |
607 |
gcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattggcaagaaaatcgtaggaaagtgtggagggtt |
686 |
Q |
| |
|
||||||||||| | ||||||||||| ||||||||||||| |||||||||||||||||| |||| ||||||| |||||| |
|
|
| T |
4388885 |
gcttttcacggaaggaatgcaagtgagtatccaaatcttgtatcaattggcaagaaaattgtagataagtgtgtagggtt |
4388964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 13 - 692
Target Start/End: Complemental strand, 8590410 - 8589728
Alignment:
| Q |
13 |
tgtgctagtaatgaaggtgaagtcggttggaaagctttaaaaagattgccaagtacatctttggtggatgaatcgagcatatatggcagagatggtgaca |
112 |
Q |
| |
|
||||||||||| ||||| |||| |||||||| ||| |||||| ||| || |||| || | |||||||| |||||||||||||| ||||||| ||| | |
|
|
| T |
8590410 |
tgtgctagtaacgaaggcttagtcagttggaaaccttcaaaaaggttgtcatctacagctcttgtggatgagtcgagcatatatggtagagatgttgata |
8590311 |
T |
|
| Q |
113 |
aagaggaagtaaccaaatttttactttccgacatagatgctggcgatcgtgtaccaataatcagcatggtgggtctaggtggaatgggaaaaaccaccct |
212 |
Q |
| |
|
| | || ||| ||| ||||||||| | | || ||| |||| | || || |||||||||||||| || ||| |||| || ||||| ||||||||||| |
|
|
| T |
8590310 |
agaaaaaactaatcaagtttttacttgcaggcaatgatagtggcaaccgcgttccaataatcagcatagtcggtttaggagggatggggaaaaccaccct |
8590211 |
T |
|
| Q |
213 |
tgctcaacttgtgtacaataacaacatgatgcagaaacagtttgaactaaaagcctgggtctatgtttcggaaactttcaatgttgttggacttaccaaa |
312 |
Q |
| |
|
|||| | ||||||||||| |||||| ||| | | || ||||| || ||||| |||||||||||||| ||| |||| ||||||||||||| |||||| |
|
|
| T |
8590210 |
tgctaagcttgtgtacaacgacaacaagatagaagagcattttgagcttaaagcatgggtctatgtttctgaatcttttgatgttgttggactcaccaaa |
8590111 |
T |
|
| Q |
313 |
gcaattttgcggtcatttcactctttggctgatggtgaagacttgaatctaccccaacatcaattgcagcagagactaacaggaaagaaatatctgcttg |
412 |
Q |
| |
|
|||||| | |||||| | |||| || |||||||||||||||||||||| |||||||||||||||||| | ||||||||| |||||||| |||||| |
|
|
| T |
8590110 |
gcaattatcaattcatttaattcttcagcagatggtgaagacttgaatctactccaacatcaattgcagcacatactaacaggcaagaaatacttgcttg |
8590011 |
T |
|
| Q |
413 |
ttttggatgatgtctggaacggtagtgcggaatgttgggagcgcttactacttccttttaacaatggatctaccggaagtaagattattgtgacaacacg |
512 |
Q |
| |
|
|||| || ||| |||||||||| | ||| ||||||||||||| ||||||||||| |||||| |||||| | | |||||||||||| | ||||||||||| |
|
|
| T |
8590010 |
ttttagacgatatctggaacgggaatgcagaatgttgggagcagttactacttccctttaaccatggattttctggaagtaagattgtcgtgacaacacg |
8589911 |
T |
|
| Q |
513 |
tgacaaggaggtagc--atca-gtcatgaagtccaccaaacttcttcatttgaagcaattggagaagagtgaatgttggagtatgtttatgagacacgct |
609 |
Q |
| |
|
||| ||||||||||| |||| || | || |||||||| | || |||| | |||||||| || || || ||||||||| | ||| ||| ||| ||| |
|
|
| T |
8589910 |
tgaaaaggaggtagcatatcatgttcttaaatccaccaagttatttgatttacaacaattggacaaaagcgattgttggagtttatttgtgacacatgct |
8589811 |
T |
|
| Q |
610 |
tttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattggcaagaaaatcgtaggaaagtgtggagggttgccttt |
692 |
Q |
| |
|
||||| || | |||| |||||||||||||||||||||||| |||||||||||| | | |||||||||||||||||||| |
|
|
| T |
8589810 |
tttcaaggaaagaatgtgtgtgaatatccaaatcttgaatcaactggcaagaaaatactggataagtgtggagggttgccttt |
8589728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 51 - 692
Target Start/End: Original strand, 8568334 - 8568975
Alignment:
| Q |
51 |
aaaaagattgccaagtacatctttggtggatgaatcgagcatatatggcagagatggtgacaaagaggaagtaaccaaatttttactttccgacatagat |
150 |
Q |
| |
|
|||||||||||||| | | ||||||||||||||||| |||||||||| ||||||| ||| ||| | || ||| ||| | ||| |||| |||| ||| |
|
|
| T |
8568334 |
aaaaagattgccaactgcgtctttggtggatgaatcttgcatatatggtagagatgatgataaaaataaaataatcaattatttgcttttagacaatgat |
8568433 |
T |
|
| Q |
151 |
gctggcgatcgtgtaccaataatcagcatggtgggtctaggtggaatgggaaaaaccacccttgctcaacttgtgtacaataacaacatgatgcagaaac |
250 |
Q |
| |
|
| |||| | | ||| |||| || || |||||||||||||| ||||| || ||||||||||||| |||||| |||||| || ||| ||| |||| | |
|
|
| T |
8568434 |
ggtggcaaccatgtgagcgtaataagtattgtgggtctaggtgggatgggtaagaccacccttgctcgacttgtctacaatgaccacaagatagagaagc |
8568533 |
T |
|
| Q |
251 |
agtttgaactaaaagcctgggtctatgtttcggaaactttcaatgttgttggacttaccaaagcaattttgcggtcatttcactctttggctgatggtga |
350 |
Q |
| |
|
| |||||||| ||||| |||||| ||||||| ||| |||| ||||||||||||| |||||| ||||| | |||||||||| || | |||| ||||| |
|
|
| T |
8568534 |
aatttgaacttaaagcttgggtccatgtttcagaatcttttgatgttgttggactcaccaaaacaattctcaggtcatttcattcctcatctgacggtga |
8568633 |
T |
|
| Q |
351 |
agacttgaatctaccccaacatcaattgcagcagagactaacaggaaagaaatatctgcttgttttggatgatgtctggaacggtagtgcggaatgttgg |
450 |
Q |
| |
|
||||||| ||| || | || |||| | || |||| | ||||||| || || | | |||||||| | |||||| ||||||| || | || ||||| |||| |
|
|
| T |
8568634 |
agacttggatccactcaaatgtcaactacaacagatattaacaggcaaaaagtttttgcttgttctagatgatatctggaatgggaatgaggaattttgg |
8568733 |
T |
|
| Q |
451 |
gagcgcttactacttccttttaacaatggatctaccggaagtaagattattgtgacaacacgtgacaaggaggtagcatcagtcatgaagtccaccaaac |
550 |
Q |
| |
|
|||| ||||||||||| ||||| |||||||| | ||||||||||||||||||||||||||||||||| | || |||| ||||||||| || | | |
|
|
| T |
8568734 |
gagcagttactacttccatttaatcatggatcttcaggaagtaagattattgtgacaacacgtgacaagcatgttgcattagtcatgaaatctgagcagc |
8568833 |
T |
|
| Q |
551 |
ttcttcatttgaagcaattggagaagagtgaatgttggagtatgtttatgagacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatc |
650 |
Q |
| |
|
|||||||| |||||||||||| ||| || ||||||||| | ||| ||| ||| |||||||| || | |||| ||||||||||||||||||||| |
|
|
| T |
8568834 |
aacttcatttaaagcaattggaggagaaagattgttggagtttatttgtgaaacatgcttttcaaggaaagaatgtgtttgaatatccaaatcttgaatc |
8568933 |
T |
|
| Q |
651 |
aattggcaagaaaatcgtaggaaagtgtggagggttgccttt |
692 |
Q |
| |
|
||||| ||||| || |||| ||||||||||||||||||||| |
|
|
| T |
8568934 |
gattggaaagaagattgtagaaaagtgtggagggttgccttt |
8568975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 169 - 529
Target Start/End: Original strand, 6448286 - 6448646
Alignment:
| Q |
169 |
ataatcagcatggtgggtctaggtggaatgggaaaaaccacccttgctcaacttgtgtacaataacaacatgatgcagaaacagtttgaactaaaagcct |
268 |
Q |
| |
|
||||||||||| |||||||| ||||| ||||| || ||||| ||||| | |||||||||||| |||||||||| || | || |||||||| ||| | | |
|
|
| T |
6448286 |
ataatcagcatagtgggtctgggtgggatgggtaagaccacttttgctaagcttgtgtacaatcacaacatgataaaggagcattttgaacttaaatctt |
6448385 |
T |
|
| Q |
269 |
gggtctatgtttcggaaactttcaatgttgttggacttaccaaagcaattttgcggtcatttcactctttggctgatggtgaagacttgaatctacccca |
368 |
Q |
| |
|
||||||||||||| ||| ||| ||||||||||||| ||||||||||| | ||||||| | |||| || |||||||||||||||||||||| ||| |
|
|
| T |
6448386 |
gggtctatgtttcagaatattttgatgttgttggactcaccaaagcaatcctaaagtcatttaattcttcagcagatggtgaagacttgaatctactcca |
6448485 |
T |
|
| Q |
369 |
acatcaattgcagcagagactaacaggaaagaaatatctgcttgttttggatgatgtctggaacggtagtgcggaatgttgggagcgcttactacttcct |
468 |
Q |
| |
|
|||| || |||| || | ||||||| |||||||||| | |||||||| || || |||||||||| | ||| ||| ||||||||| |||| ||||| |
|
|
| T |
6448486 |
acatgaactgcaacacatactaacaagaaagaaatactttcttgttttagacgacatctggaacgggaatgcagaacgttgggagcaggtactgcttccg |
6448585 |
T |
|
| Q |
469 |
tttaacaatggatctaccggaagtaagattattgtgacaacacgtgacaaggaggtagcat |
529 |
Q |
| |
|
|||||| |||||||| | ||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
6448586 |
tttaaccatggatcttctggaagtaagattattgtgacaacacgtgaaaaggaggtagcat |
6448646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 166 - 529
Target Start/End: Complemental strand, 6736518 - 6736155
Alignment:
| Q |
166 |
ccaataatcagcatggtgggtctaggtggaatgggaaaaaccacccttgctcaacttgtgtacaataacaacatgatgcagaaacagtttgaactaaaag |
265 |
Q |
| |
|
|||||||| ||||| |||||| |||| || ||||| ||||||||||||||| | ||||||||||| |||||| ||| |||| || |||||||| |||| |
|
|
| T |
6736518 |
ccaataattagcatagtgggtttaggagggatggggaaaaccacccttgctaagcttgtgtacaacgacaacaagataaagaagcattttgaacttaaag |
6736419 |
T |
|
| Q |
266 |
cctgggtctatgtttcggaaactttcaatgttgttggacttaccaaagcaattttgcggtcatttcactctttggctgatggtgaagacttgaatctacc |
365 |
Q |
| |
|
| |||||||||||||| ||| ||||| ||||| ||||||| |||||||||||| | ||||||| | ||| || ||||||||||||||||||| || |
|
|
| T |
6736418 |
catgggtctatgtttcagaatctttcgatgtttttggactcaccaaagcaattctcaagtcatttaatccttcagcagatggtgaagacttgaatcaact |
6736319 |
T |
|
| Q |
366 |
ccaacatcaattgcagcagagactaacaggaaagaaatatctgcttgttttggatgatgtctggaacggtagtgcggaatgttgggagcgcttactactt |
465 |
Q |
| |
|
|||||||||| | || || | ||| ||||||||||| |||||||||| |||||| ||||||| || |||| |||| |||||||| |||||||| |
|
|
| T |
6736318 |
ccaacatcaactccaacacatgttaatgggaaagaaatacttgcttgttttagatgatatctggaatgggagtgtagaatattgggagcagctactactt |
6736219 |
T |
|
| Q |
466 |
ccttttaacaatggatctaccggaagtaagattattgtgacaacacgtgacaaggaggtagcat |
529 |
Q |
| |
|
|| |||||| |||||||| | |||||||| ||||| |||||||||||||| ||||||||||||| |
|
|
| T |
6736218 |
ccgtttaaccatggatcttctggaagtaaaattatcgtgacaacacgtgaaaaggaggtagcat |
6736155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 166 - 529
Target Start/End: Complemental strand, 6947797 - 6947434
Alignment:
| Q |
166 |
ccaataatcagcatggtgggtctaggtggaatgggaaaaaccacccttgctcaacttgtgtacaataacaacatgatgcagaaacagtttgaactaaaag |
265 |
Q |
| |
|
|||||||||||||| |||||| |||| || ||||| ||||||||||||||| | |||||||||||| |||||| ||| || | || ||||| || ||| |
|
|
| T |
6947797 |
ccaataatcagcatagtgggtttaggagggatggggaaaaccacccttgctaagcttgtgtacaatgacaacaagatagaggagcattttgaccttaaaa |
6947698 |
T |
|
| Q |
266 |
cctgggtctatgtttcggaaactttcaatgttgttggacttaccaaagcaattttgcggtcatttcactctttggctgatggtgaagacttgaatctacc |
365 |
Q |
| |
|
| |||||||| ||||| ||| |||| ||||||||||||| |||||||||||| | ||||||| | |||| || |||||||||||||||||||||| |
|
|
| T |
6947697 |
catgggtctacgtttcagaatcttttgatgttgttggactcaccaaagcaattctcaagtcatttaattcttcagcagatggtgaagacttgaatctact |
6947598 |
T |
|
| Q |
366 |
ccaacatcaattgcagcagagactaacaggaaagaaatatctgcttgttttggatgatgtctggaacggtagtgcggaatgttgggagcgcttactactt |
465 |
Q |
| |
|
|||||||||| | || || | ||| ||||||||||| |||||||||| |||||| |||||||||| ||| ||||||||||||| ||||| ||| |
|
|
| T |
6947597 |
ccaacatcaactccaacacatgttaatgggaaagaaatacttgcttgttttagatgatatctggaacggggatgcagaatgttgggagctgttacttctt |
6947498 |
T |
|
| Q |
466 |
ccttttaacaatggatctaccggaagtaagattattgtgacaacacgtgacaaggaggtagcat |
529 |
Q |
| |
|
|| |||||| |||||||| | |||||||||||||| |||||||| ||||| ||||||| ||||| |
|
|
| T |
6947497 |
ccctttaaccatggatcttctggaagtaagattatcgtgacaactcgtgaaaaggaggcagcat |
6947434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 12 - 524
Target Start/End: Complemental strand, 8455336 - 8454824
Alignment:
| Q |
12 |
ttgtgctagtaatgaaggtgaagtcggttggaaagctttaaaaagattgccaagtacatctttggtggatgaatcgagcatatatggcagagatggtgac |
111 |
Q |
| |
|
||||||||| |||||||| |||| |||||||| ||| |||||| ||| || |||| || | |||||||| |||||||||||||| |||||| ||| |
|
|
| T |
8455336 |
ttgtgctaggaatgaaggcttagtcagttggaaaccttcaaaaaggttgtcatctacagctctcgtggatgagtcgagcatatatggtcgagatgttgat |
8455237 |
T |
|
| Q |
112 |
aaagaggaagtaaccaaatttttactttccgacatagatgctggcgatcgtgtaccaataatcagcatggtgggtctaggtggaatgggaaaaaccaccc |
211 |
Q |
| |
|
|| || || ||| ||| ||||||||| | | || ||| |||| | | || |||||||||||||| || ||| |||| || ||||| |||||||||| |
|
|
| T |
8455236 |
aaggaaaaattaatcaagtttttacttgcaggcaatgatagtggcaaccaggttccaataatcagcatagtcggtttaggagggatgggtaaaaccaccc |
8455137 |
T |
|
| Q |
212 |
ttgctcaacttgtgtacaataacaacatgatgcagaaacagtttgaactaaaagcctgggtctatgtttcggaaactttcaatgttgttggacttaccaa |
311 |
Q |
| |
|
||||| | |||||||||||| |||||| ||| || | || |||||||| ||||| |||||||||||||| ||| |||| ||||||||||||| ||||| |
|
|
| T |
8455136 |
ttgctaagcttgtgtacaatgacaacaagataaaggagcattttgaacttaaagcatgggtctatgtttcagaatcttttgatgttgttggactcaccaa |
8455037 |
T |
|
| Q |
312 |
agcaattttgcggtcatttcactctttggctgatggtgaagacttgaatctaccccaacatcaattgcagcagagactaacaggaaagaaatatctgctt |
411 |
Q |
| |
|
||||||| | ||| ||| | |||| || |||||||||||||| ||||||| |||||||||| | || | | |||| || ||||||||| ||||| |
|
|
| T |
8455036 |
agcaattctcaagtcgtttaattcttcagcagatggtgaagacttaaatctactccaacatcaactccaatacatgctaatgggcaagaaatatttgctt |
8454937 |
T |
|
| Q |
412 |
gttttggatgatgtctggaacggtagtgcggaatgttgggagcgcttactacttccttttaacaatggatctaccggaagtaagattattgtgacaacac |
511 |
Q |
| |
|
||||| || ||| |||||||||| ||||||| |||||||| ||||||||||| |||||| |||||||| |||||||||||| | |||||||||| |
|
|
| T |
8454936 |
gttttagacgatatctggaacggggatgcggaacgttgggagttgttactacttccctttaaccatggatcttttggaagtaagattgtcgtgacaacac |
8454837 |
T |
|
| Q |
512 |
gtgacaaggaggt |
524 |
Q |
| |
|
|||| |||||||| |
|
|
| T |
8454836 |
gtgagaaggaggt |
8454824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 166 - 692
Target Start/End: Original strand, 6553939 - 6554468
Alignment:
| Q |
166 |
ccaataatcagcatggtgggtctaggtggaatgggaaaaaccacccttgctcaacttgtgtacaataacaacatgatgcagaaacagtttgaactaaaag |
265 |
Q |
| |
|
|||||||||||||| |||||| |||| || ||||| ||||||||||||||| | ||||||||||| |||||| ||| |||| || |||||||| |||| |
|
|
| T |
6553939 |
ccaataatcagcatagtgggtttaggagggatggggaaaaccacccttgctaagcttgtgtacaacgacaacaagataaagaagcattttgaacttaaag |
6554038 |
T |
|
| Q |
266 |
cctgggtctatgtttcggaaactttcaatgttgttggacttaccaaagcaattttgcggtcatttcactctttggctgatggtgaagacttgaatctacc |
365 |
Q |
| |
|
| |||||||||||||| ||| ||||| ||||| ||||||| |||||||||||| | ||||||| | ||| || ||||||||| ||||| ||| || |
|
|
| T |
6554039 |
catgggtctatgtttcagaatctttcgatgtttttggactcaccaaagcaattctcaagtcatttaatccttcagcagatggtgaatacttggatcaact |
6554138 |
T |
|
| Q |
366 |
ccaacatcaattgcagcagagactaacaggaaagaaatatctgcttgttttggatgatgtctggaacggtagtgcggaatgttgggagcgcttactactt |
465 |
Q |
| |
|
|||||||||| | || | | |||| ||||||||||| |||||||||| |||||| | ||||| || |||| |||| |||||||| |||||||| |
|
|
| T |
6554139 |
ccaacatcaactccaagacatgctaatgggaaagaaatacttgcttgttttagatgatatatggaatgggagtgtagaatattgggagcagctactactt |
6554238 |
T |
|
| Q |
466 |
ccttttaacaatggatctaccggaagtaagattattgtgacaacacgtgacaaggaggtagcatcagtcatg-----aagtccaccaaacttcttcattt |
560 |
Q |
| |
|
|| |||||| |||||||| | ||||||| |||||| |||||||||||||| ||||||||||||| |||||| || || |||||| | || |||| |
|
|
| T |
6554239 |
ccgtttaaccatggatcttctggaagtatgattatcgtgacaacacgtgaaaaggaggtagcat--gtcatgttctaaaatcaaccaaattatttgattt |
6554336 |
T |
|
| Q |
561 |
gaagcaattggagaagagtgaatgttggagtatgtttatgagacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattggcaag |
660 |
Q |
| |
|
| |||||||| || || | |||||||| | ||| ||| ||| |||||||| || | || || |||||||||||||||||||| ||||||| | | |
|
|
| T |
6554337 |
acaacaattggaaaaaagcaattgttggagattatttgtgacacatgcttttcaaggaaaaagtgtgtgtgaatatccaaatcttgaaacaattgggagg |
6554436 |
T |
|
| Q |
661 |
aaaatcgtaggaaagtgtggagggttgccttt |
692 |
Q |
| |
|
||||| || | |||||||||||||||||||| |
|
|
| T |
6554437 |
aaaatagtggacaagtgtggagggttgccttt |
6554468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 352 - 684
Target Start/End: Complemental strand, 5281023 - 5280691
Alignment:
| Q |
352 |
gacttgaatctaccccaacatcaattgcagcagagactaacaggaaagaaatatctgcttgttttggatgatgtctggaacggtagtgcggaatgttggg |
451 |
Q |
| |
|
||||||||||||| |||||| || |||| || ||| ||||||| | || |||| |||||||| | || || || ||| || |||| ||||||||||| |
|
|
| T |
5281023 |
gacttgaatctactccaacaacagctgcatcaaagaataacaggcacgagatatttgcttgttatagaggacgttcagaatggcagtggggaatgttggg |
5280924 |
T |
|
| Q |
452 |
agcgcttactacttccttttaacaatggatctaccggaagtaagattattgtgacaacacgtgacaaggaggtagcatcagtcatgaagtccaccaaact |
551 |
Q |
| |
|
| | ||||||||||| ||||| |||||||| |||||||||||||||||||| ||||||||||| ||||||||| |||| ||||| ||| || || | |
|
|
| T |
5280923 |
aacagttactacttccctttaatcatggatcttttggaagtaagattattgtgaccacacgtgacaaagaggtagcagcagtaatgaaatcctcccaaat |
5280824 |
T |
|
| Q |
552 |
tcttcatttgaagcaattggagaagagtgaatgttggagtatgtttatgagacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatca |
651 |
Q |
| |
|
|||||||||||||||||||| | || || |||||| | | ||| ||||||| ||||||||||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
5280823 |
agttcatttgaagcaattggaggaaagcgatggttggaatttatttgtgagacatgcttttcacggaaaaaatgcaagtgaatatccaaatcttgaatca |
5280724 |
T |
|
| Q |
652 |
attggcaagaaaatcgtaggaaagtgtggaggg |
684 |
Q |
| |
|
||||| |||||||| ||| |||||||||||| |
|
|
| T |
5280723 |
attgggaagaaaattgtaaacaagtgtggaggg |
5280691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 14 - 529
Target Start/End: Original strand, 6479331 - 6479846
Alignment:
| Q |
14 |
gtgctagtaatgaaggtgaagtcggttggaaagctttaaaaagattgccaagtacatctttggtggatgaatcgagcatatatggcagagatggtgacaa |
113 |
Q |
| |
|
|||||||||||||||| |||| |||||||| ||| |||||||||| || ||| || | |||||||| || ||||||||||||||||||| |||||| |
|
|
| T |
6479331 |
gtgctagtaatgaaggcttagtcagttggaaaccttcaaaaagattgtcatctacggctctcgtggatgagtccagcatatatggcagagatgttgacaa |
6479430 |
T |
|
| Q |
114 |
agaggaagtaaccaaatttttactttccgacatagatgctggcgatcgtgtaccaataatcagcatggtgggtctaggtggaatgggaaaaaccaccctt |
213 |
Q |
| |
|
|| ||| | | ||||||||||||| | | || || ||| | || || ||||||||||| || ||| |||| || ||||| |||||||||||| |
|
|
| T |
6479431 |
ggaagaacttatcaaatttttacttgcaggcaatgacagtggaacccaggttccgataatcagcatagttggtttaggagggatggggaaaaccaccctt |
6479530 |
T |
|
| Q |
214 |
gctcaacttgtgtacaataacaacatgatgcagaaacagtttgaactaaaagcctgggtctatgtttcggaaactttcaatgttgttggacttaccaaag |
313 |
Q |
| |
|
||| | ||||||||||| ||||||| ||| || |||| |||||||| ||||| |||||||||||||| ||| ||| ||||||||||||| ||||||| |
|
|
| T |
6479531 |
gctaagcttgtgtacaacaacaacaagatagaggaacattttgaacttaaagcatgggtctatgtttcagaatcttatgatgttgttggactcaccaaag |
6479630 |
T |
|
| Q |
314 |
caattttgcggtcatttcactctttggctgatggtgaagacttgaatctaccccaacatcaattgcagcagagactaacaggaaagaaatatctgcttgt |
413 |
Q |
| |
|
||||| | ||||||| | ||| || ||||||||| ||||| ||| || |||||||||| | || || | ||| ||||||||||| ||||||| |
|
|
| T |
6479631 |
caattctcaagtcatttaatccttcagcagatggtgaatacttggatcaactccaacatcaactccaacacatgttaatgggaaagaaatacttgcttgt |
6479730 |
T |
|
| Q |
414 |
tttggatgatgtctggaacggtagtgcggaatgttgggagcgcttactacttccttttaacaatggatctaccggaagtaagattattgtgacaacacgt |
513 |
Q |
| |
|
||| |||||| ||||||| || | || || | |||||||| ||||||||||| |||||| |||||||| |||||||||||||| |||||||||||| |
|
|
| T |
6479731 |
tttagatgatatctggaatgggaatgtagagtattgggagcagttactacttccatttaaccatggatcttttggaagtaagattatcgtgacaacacgt |
6479830 |
T |
|
| Q |
514 |
gacaaggaggtagcat |
529 |
Q |
| |
|
|| |||||||| |||| |
|
|
| T |
6479831 |
gaaaaggaggtggcat |
6479846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 166 - 528
Target Start/End: Original strand, 6519663 - 6520025
Alignment:
| Q |
166 |
ccaataatcagcatggtgggtctaggtggaatgggaaaaaccacccttgctcaacttgtgtacaataacaacatgatgcagaaacagtttgaactaaaag |
265 |
Q |
| |
|
|||||||||||||| |||||| |||| |||||||| ||||||||||||||||||| ||| |||||| ||||||||| |||| || |||||||| |||| |
|
|
| T |
6519663 |
ccaataatcagcatagtgggtttaggaggaatgggtaaaaccacccttgctcaacatgtctacaatgacaacatgacaaagaagcattttgaacttaaag |
6519762 |
T |
|
| Q |
266 |
cctgggtctatgtttcggaaactttcaatgttgttggacttaccaaagcaattttgcggtcatttcactctttggctgatggtgaagacttgaatctacc |
365 |
Q |
| |
|
| |||||||||||||| ||| |||| ||| ||||||||| |||||||||||| | ||||||| | ||| || ||||||||| ||||| ||| || |
|
|
| T |
6519763 |
catgggtctatgtttcagaatcttttgatgatgttggactcaccaaagcaattctcaagtcatttaatccttcagcagatggtgaatacttggatcaact |
6519862 |
T |
|
| Q |
366 |
ccaacatcaattgcagcagagactaacaggaaagaaatatctgcttgttttggatgatgtctggaacggtagtgcggaatgttgggagcgcttactactt |
465 |
Q |
| |
|
|||||||||| | || || |||| | ||||||||| |||||||||| |||||| ||||||| || | | |||| ||||| ||||||||| |
|
|
| T |
6519863 |
ccaacatcaactccaacacctgctaatggcaaagaaatacttgcttgttttagatgatatctggaatgggaaggtagaatactgggataagttactactt |
6519962 |
T |
|
| Q |
466 |
ccttttaacaatggatctaccggaagtaagattattgtgacaacacgtgacaaggaggtagca |
528 |
Q |
| |
|
|| ||||| |||||||| | |||||||||||||| |||||||||||||| ||| |||||||| |
|
|
| T |
6519963 |
ccgcttaaccatggatcttctggaagtaagattatcgtgacaacacgtgaaaagaaggtagca |
6520025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 397 - 692
Target Start/End: Original strand, 6838633 - 6838928
Alignment:
| Q |
397 |
aagaaatatctgcttgttttggatgatgtctggaacggtagtgcggaatgttgggagcgcttactacttccttttaacaatggatctaccggaagtaaga |
496 |
Q |
| |
|
||||| ||||| |||||| |||||||||||||||| | || |||| |||||||| |||||||||||||||||| | |||||| | ||||||| |
|
|
| T |
6838633 |
aagaactatctacttgttgtggatgatgtctggaaactgaatgaggaaagttgggagacgttactacttccttttaaccaaggatcttctacgagtaaga |
6838732 |
T |
|
| Q |
497 |
ttattgtgacaacacgtgacaaggaggtagcatcagtcatgaagtccaccaaacttcttcatttgaagcaattggagaagagtgaatgttggagtatgtt |
596 |
Q |
| |
|
|||||||||||||||| || || | ||||||||| | |||| || || || | || ||||||| ||||||||||||||||| |||||||| | || |
|
|
| T |
6838733 |
ttattgtgacaacacgcgataaaaatgtagcatcaattgtgaaatctacaaagttatttgatttgaaacaattggagaagagtgacagttggagtttatt |
6838832 |
T |
|
| Q |
597 |
tatgagacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattggcaagaaaatcgtaggaaagtgtggagggttgccttt |
692 |
Q |
| |
|
| | || ||||||||||||| ||||||||| ||||| ||||| ||||||||||||||||| || || |||| |||||||||||||||||||| |
|
|
| T |
6838833 |
ttccacacttgcttttcacggcaaaaatgcaagcgaatacccaaaacttgaatcaattggcaaaaagattgtagataagtgtggagggttgccttt |
6838928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 477 - 692
Target Start/End: Complemental strand, 6882746 - 6882531
Alignment:
| Q |
477 |
tggatctaccggaagtaagattattgtgacaacacgtgacaaggaggtagcatcagtcatgaagtccaccaaacttcttcatttgaagcaattggagaag |
576 |
Q |
| |
|
||||||| | ||||||||||| ||||||||||||| ||||||||| ||||||||| |||||| |||||| || | || || |||||||||||| || |
|
|
| T |
6882746 |
tggatcttcaggaagtaagatgattgtgacaacacatgacaaggaagtagcatcaatcatgagatccacccggctaatacacttaaagcaattggaggag |
6882647 |
T |
|
| Q |
577 |
agtgaatgttggagtatgtttatgagacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattggcaagaaaatcgtaggaaagt |
676 |
Q |
| |
|
||||| | ||||||| | ||| ||||| | |||||||| || | |||| | |||||||||||||||||||| || ||||||||||| |||| ||||| |
|
|
| T |
6882646 |
agtgattcttggagtttatttgtgagatatgcttttcaaggtaggaatgtatttgaatatccaaatcttgaattgataggcaagaaaatagtagaaaagt |
6882547 |
T |
|
| Q |
677 |
gtggagggttgccttt |
692 |
Q |
| |
|
|||| ||||||||||| |
|
|
| T |
6882546 |
gtggggggttgccttt |
6882531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 457 - 692
Target Start/End: Complemental strand, 6265953 - 6265718
Alignment:
| Q |
457 |
ttactacttccttttaacaatggatctaccggaagtaagattattgtgacaacacgtgacaaggaggtagcatcagtcatgaagtccaccaaacttcttc |
556 |
Q |
| |
|
|||||||||||| ||||| ||||||| | || ||||||| || |||||||||| ||||| |||||||| | ||| |||| ||||| ||| |||| |
|
|
| T |
6265953 |
ttactacttcctcttaaccgtggatcttctcgaggtaagatgatcgtgacaacacatgacagtgaggtagcgttagttatgagatccacacgactacttc |
6265854 |
T |
|
| Q |
557 |
atttgaagcaattggagaagagtgaatgttggagtatgtttatgagacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattgg |
656 |
Q |
| |
|
|||| |||||||||||| ||||||| | ||||||| | ||| ||||| | |||||||| |||| |||| |||||||||||||||||||| ||||| |
|
|
| T |
6265853 |
atttaaagcaattggaggagagtgactcttggagtttatttgtgagatatgcttttcaaggcaagaatgtgtttgaatatccaaatcttgaattgattgg |
6265754 |
T |
|
| Q |
657 |
caagaaaatcgtaggaaagtgtggagggttgccttt |
692 |
Q |
| |
|
||||||||| |||| ||| ||||| ||||||||||| |
|
|
| T |
6265753 |
caagaaaatagtagcaaaatgtggggggttgccttt |
6265718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 397 - 692
Target Start/End: Complemental strand, 8471858 - 8471563
Alignment:
| Q |
397 |
aagaaatatctgcttgttttggatgatgtctggaacggtagtgcggaatgttgggagcgcttactacttccttttaacaatggatctaccggaagtaaga |
496 |
Q |
| |
|
||||| ||||| |||||| |||||||||||||||| | || |||| |||||||| ||||||||||| |||||| |||||||| | ||||||| |
|
|
| T |
8471858 |
aagaactatctacttgttgtggatgatgtctggaaactgaatgaggaaagttgggagaagttactacttccctttaaccatggatcttctacgagtaaga |
8471759 |
T |
|
| Q |
497 |
ttattgtgacaacacgtgacaaggaggtagcatcagtcatgaagtccaccaaacttcttcatttgaagcaattggagaagagtgaatgttggagtatgtt |
596 |
Q |
| |
|
|||||||||||||||| ||||| |||||||||| | | |||| || || || | || ||||||| ||||||||||||||||| ||||||||| | || |
|
|
| T |
8471758 |
ttattgtgacaacacgcgacaaagaggtagcattaattgtgaaatctacaaagttatttgatttgaaacaattggagaagagtgactgttggagtttatt |
8471659 |
T |
|
| Q |
597 |
tatgagacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattggcaagaaaatcgtaggaaagtgtggagggttgccttt |
692 |
Q |
| |
|
| || | ||||||| |||| ||| || ||||| ||||||||||||||||||||||| || || |||| |||||||||||| ||||||| |
|
|
| T |
8471658 |
ttccagtcttgcttttcctggcaaaaaattgagcgaatacccaaatcttgaatcaattggcaaaaatattgtagataagtgtggagggctgccttt |
8471563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 487 - 689
Target Start/End: Complemental strand, 6142518 - 6142316
Alignment:
| Q |
487 |
ggaagtaagattattgtgacaacacgtgacaaggaggtagcatcagtcatgaagtccaccaaacttcttcatttgaagcaattggagaagagtgaatgtt |
586 |
Q |
| |
|
||||||||||| ||||||||||||| ||||||||| ||||||||| ||||| ||| | | ||||||||||||||||||||| ||||| | | || |
|
|
| T |
6142518 |
ggaagtaagatgattgtgacaacacatgacaaggaagtagcatcaagcatgagttccgctcggatacttcatttgaagcaattggaggagagtaactctt |
6142419 |
T |
|
| Q |
587 |
ggagtatgtttatgagacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattggcaagaaaatcgtaggaaagtgtggagggtt |
686 |
Q |
| |
|
||||| | ||| ||||| | ||||||| || | |||| || ||||||||||||||||| || ||||||||||| |||| ||||||||| ||||| |
|
|
| T |
6142418 |
ggagtttatttgtgagatatgcttttccaggtaggaatgtgtttggatatccaaatcttgaattgataggcaagaaaatagtagaaaagtgtggggggtt |
6142319 |
T |
|
| Q |
687 |
gcc |
689 |
Q |
| |
|
||| |
|
|
| T |
6142318 |
gcc |
6142316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 366 - 613
Target Start/End: Original strand, 6591032 - 6591279
Alignment:
| Q |
366 |
ccaacatcaattgcagcagagactaacaggaaagaaatatctgcttgttttggatgatgtctggaacggtagtgcggaatgttgggagcgcttactactt |
465 |
Q |
| |
|
||||| |||||| || |||| | |||| || |||||||| |||||||||| || || |||| | ||| | ||||||||||||||| |||||||| |
|
|
| T |
6591032 |
ccaacgtcaattacaacagatagtaactggcaagaaatacttgcttgttttagacaatatctgtagcggaaaagcggaatgttgggagatgctactactt |
6591131 |
T |
|
| Q |
466 |
ccttttaacaatggatctaccggaagtaagattattgtgacaacacgtgacaaggaggtagcatcagtcatgaagtccaccaaacttcttcatttgaagc |
565 |
Q |
| |
|
|| |||| | |||||||| | ||||||||||| || |||||||| | ||||||||| ||||||||| ||||| |||||| | || || |||| || | |
|
|
| T |
6591132 |
ccgtttagccatggatcttctggaagtaagatgatggtgacaacgcatgacaaggaagtagcatcaatcatgggatccacccagctagttgatttaaatc |
6591231 |
T |
|
| Q |
566 |
aattggagaagagtgaatgttggagtatgtttatgagacacgcttttc |
613 |
Q |
| |
|
|||||||| ||||||| | ||||||| | ||| ||||| | ||||||| |
|
|
| T |
6591232 |
aattggaggagagtgactcttggagtttatttgtgagatatgcttttc |
6591279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 629 - 690
Target Start/End: Complemental strand, 6736052 - 6735991
Alignment:
| Q |
629 |
gtgaatatccaaatcttgaatcaattggcaagaaaatcgtaggaaagtgtggagggttgcct |
690 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| || | |||||||||||||||||| |
|
|
| T |
6736052 |
gtgaatatccaaatcttgaatcaattgggaagaaaatagtggagaagtgtggagggttgcct |
6735991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 502 - 692
Target Start/End: Complemental strand, 6169108 - 6168918
Alignment:
| Q |
502 |
gtgacaacacgtgacaaggaggtagcatcagtcatgaagtccaccaaacttcttcatttgaagcaattggagaagagtgaatgttggagtatgtttatga |
601 |
Q |
| |
|
|||||||||| ||| || || || ||||||||||||| |||||| | | |||||||| | |||||||||| ||||||| | ||||||| | ||| | | |
|
|
| T |
6169108 |
gtgacaacacatgataaagaagttgcatcagtcatgagatccacccagatacttcatttaaggcaattggaggagagtgactcttggagtttatttgtaa |
6169009 |
T |
|
| Q |
602 |
gacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattggcaagaaaatcgtaggaaagtgtggagggttgccttt |
692 |
Q |
| |
|
|||| |||||| | |||| ||| ||||||||||||||||||||| ||||| | |||||| |||| ||| ||||| |||| |||||| |
|
|
| T |
6169008 |
gacatgcttttgaaggcaggaatatgtttgaatatccaaatcttgaatcgattggtatgaaaatagtagaaaaatgtggggggtcgccttt |
6168918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 448 - 538
Target Start/End: Original strand, 6721852 - 6721942
Alignment:
| Q |
448 |
tgggagcgcttactacttccttttaacaatggatctaccggaagtaagattattgtgacaacacgtgacaaggaggtagcatcagtcatga |
538 |
Q |
| |
|
||||||| |||||||||| |||||| ||||||| | ||||||||||| || ||||||||||| |||||||| ||||||||| |||||| |
|
|
| T |
6721852 |
tgggagcagttactacttctttttaaatgtggatcttcaggaagtaagatgatcgtgacaacacgggacaaggaagtagcatcaatcatga |
6721942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 630 - 691
Target Start/End: Complemental strand, 6259288 - 6259227
Alignment:
| Q |
630 |
tgaatatccaaatcttgaatcaattggcaagaaaatcgtaggaaagtgtggagggttgcctt |
691 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||| |||| ||| ||||| |||||||||| |
|
|
| T |
6259288 |
tgaatatccaaatcttgaatcgatcggcaagaaaatagtagaaaaatgtggggggttgcctt |
6259227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 503 - 692
Target Start/End: Complemental strand, 6917317 - 6917128
Alignment:
| Q |
503 |
tgacaacacgtgacaaggaggtagcatcagtcatgaagtccaccaaacttcttcatttgaagcaattggagaagagtgaatgttggagtatgtttatgag |
602 |
Q |
| |
|
|||||||| ||||||||| ||||||||| |||||| |||||| || ||| |||| |||||||| || |||||| ||| ||||| | ||| |||| |
|
|
| T |
6917317 |
tgacaacatatgacaaggaagtagcatcaatcatgagatccacccggctacttgatttaaagcaattagaagagagtggttgtaggagtttatttgtgag |
6917218 |
T |
|
| Q |
603 |
acacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattggcaagaaaatcgtaggaaagtgtggagggttgccttt |
692 |
Q |
| |
|
|| |||||||| | | ||||| ||| || |||||||||||||| |||||||||||||| |||| || ||||||||||||||||| |
|
|
| T |
6917217 |
tcatgcttttcatgataggaatgcgagtcaacatccaaatcttgaaattattggcaagaaaatagtagacaaatgtggagggttgccttt |
6917128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 502 - 692
Target Start/End: Complemental strand, 6245504 - 6245314
Alignment:
| Q |
502 |
gtgacaacacgtgacaaggaggtagcatcagtcatgaagtccaccaaacttcttcatttgaagcaattggagaagagtgaatgttggagtatgtttatga |
601 |
Q |
| |
|
|||||||||| ||| || || || ||||||||||||| | |||| | | |||||||| | |||||||||| ||||||| | ||||||| | ||| | | |
|
|
| T |
6245504 |
gtgacaacacatgataaagaagttgcatcagtcatgagatacacccagatacttcatttaaggcaattggaggagagtgactcttggagtttatttgtaa |
6245405 |
T |
|
| Q |
602 |
gacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattggcaagaaaatcgtaggaaagtgtggagggttgccttt |
692 |
Q |
| |
|
|||| |||||| | |||| ||| ||||||||||||||||||||| ||||| | |||||| |||| ||| ||||| |||| |||||| |
|
|
| T |
6245404 |
gacatgcttttgaaggcaggaatatgtttgaatatccaaatcttgaatcgattggtatgaaaatagtagaaaaatgtggggggtcgccttt |
6245314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 630 - 692
Target Start/End: Complemental strand, 7750088 - 7750026
Alignment:
| Q |
630 |
tgaatatccaaatcttgaatcaattggcaagaaaatcgtaggaaagtgtggagggttgccttt |
692 |
Q |
| |
|
||||||||||||||| || || || ||||||||||| |||| ||||||||| ||||||||||| |
|
|
| T |
7750088 |
tgaatatccaaatctcgagtcgatcggcaagaaaatagtagaaaagtgtggggggttgccttt |
7750026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 630 - 692
Target Start/End: Complemental strand, 8454715 - 8454653
Alignment:
| Q |
630 |
tgaatatccaaatcttgaatcaattggcaagaaaatcgtaggaaagtgtggagggttgccttt |
692 |
Q |
| |
|
|||||||||||||||||||||| |||| | ||||| || | ||||||||||||||||||||| |
|
|
| T |
8454715 |
tgaatatccaaatcttgaatcagttggtagaaaaatagtggaaaagtgtggagggttgccttt |
8454653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 491 - 692
Target Start/End: Complemental strand, 6900316 - 6900115
Alignment:
| Q |
491 |
gtaagattattgtgacaacacgtgacaaggaggtagcatcagtcatgaagtccaccaaacttcttcatttgaagcaattggagaagagtgaatgttggag |
590 |
Q |
| |
|
||||||| ||||||||||||| ||| | ||| ||||||||| |||| | || || |||| |||||||| || |||||| || ||||||| |||||||| |
|
|
| T |
6900316 |
gtaagatgattgtgacaacacatgatatggaagtagcatcaatcataagatctacgcaactacttcatttaaaacaattgaaggagagtgattgttggag |
6900217 |
T |
|
| Q |
591 |
tatgtttatgagacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattggcaagaaaatcgtaggaaagtgtggagggttgcct |
690 |
Q |
| |
|
| | ||| ||| ||| || |||| || | ||| | | ||||||||||||||| |||| || ||||| |||| ||| |||||||| |||||||||| |
|
|
| T |
6900216 |
tttatttgtgaaacatgcctttctaggaagaaaagtatttgaatatccaaatctggaattgataggcaaacaaatagtacaaaagtgtgaagggttgcct |
6900117 |
T |
|
| Q |
691 |
tt |
692 |
Q |
| |
|
|| |
|
|
| T |
6900116 |
tt |
6900115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 635 - 692
Target Start/End: Complemental strand, 6947325 - 6947268
Alignment:
| Q |
635 |
atccaaatcttgaatcaattggcaagaaaatcgtaggaaagtgtggagggttgccttt |
692 |
Q |
| |
|
||||||| |||||||||||||| | |||||| || | |||||||||||||||||||| |
|
|
| T |
6947325 |
atccaaaacttgaatcaattgggaggaaaatagtggacaagtgtggagggttgccttt |
6947268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 81 - 145
Target Start/End: Complemental strand, 6259795 - 6259731
Alignment:
| Q |
81 |
tgaatcgagcatatatggcagagatggtgacaaagaggaagtaaccaaatttttactttccgaca |
145 |
Q |
| |
|
|||||| | ||||||||| ||||| |||| ||||||||| ||| ||||||||||||||| |||| |
|
|
| T |
6259795 |
tgaatctatcatatatggtagagaacgtgaaaaagaggaaataatcaaatttttactttcagaca |
6259731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425 (Bit Score: 121; Significance: 1e-61; HSPs: 1)
Name: scaffold0425
Description:
Target: scaffold0425; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 166 - 692
Target Start/End: Original strand, 6978 - 7507
Alignment:
| Q |
166 |
ccaataatcagcatggtgggtctaggtggaatgggaaaaaccacccttgctcaacttgtgtacaataacaacatgatgcagaaacagtttgaactaaaag |
265 |
Q |
| |
|
|||||||||||||| |||||| |||| || ||||| ||||||||||||||| | ||||||||||| |||||| ||| |||| || |||||||| |||| |
|
|
| T |
6978 |
ccaataatcagcatagtgggtttaggagggatggggaaaaccacccttgctaagcttgtgtacaaagacaacaagataaagaagcattttgaacttaaag |
7077 |
T |
|
| Q |
266 |
cctgggtctatgtttcggaaactttcaatgttgttggacttaccaaagcaattttgcggtcatttcactctttggctgatggtgaagacttgaatctacc |
365 |
Q |
| |
|
| |||||||||||||| ||| ||||| ||||| ||||||| |||||||||||| | ||||||| | ||| || ||||||||||||||||||| || |
|
|
| T |
7078 |
catgggtctatgtttcagaatctttcgatgtttttggactcaccaaagcaattctcaagtcatttaatccttcagcagatggtgaagacttgaatcaact |
7177 |
T |
|
| Q |
366 |
ccaacatcaattgcagcagagactaacaggaaagaaatatctgcttgttttggatgatgtctggaacggtagtgcggaatgttgggagcgcttactactt |
465 |
Q |
| |
|
|||||||||| | || || | ||| ||||||||||| |||||||||| |||||| | ||||| || |||| |||| |||||||| |||||||| |
|
|
| T |
7178 |
ccaacatcaactccaacacatgttaatgggaaagaaatacttgcttgttttagatgatatatggaatgggagtgtagaatattgggagcagctactactt |
7277 |
T |
|
| Q |
466 |
ccttttaacaatggatctaccggaagtaagattattgtgacaacacgtgacaaggaggtagcatcagtcatg-----aagtccaccaaacttcttcattt |
560 |
Q |
| |
|
|| |||||| |||||||| | |||||||| ||||| |||||||||||||| ||||||||||||| |||||| || || |||||| | || |||| |
|
|
| T |
7278 |
ccgtttaaccatggatcttctggaagtaaaattatcgtgacaacacgtgaaaaggaggtagcat--gtcatgttctaaaatcaaccaaattatttgattt |
7375 |
T |
|
| Q |
561 |
gaagcaattggagaagagtgaatgttggagtatgtttatgagacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattggcaag |
660 |
Q |
| |
|
| |||||||| || || | |||||||| | ||| ||| ||| |||||||| || | || || |||||||||||||||||||| ||||||| ||| |
|
|
| T |
7376 |
acaacaattggaaaaaagcaattgttggagattatttgtgacacatgcttttcaaggaaaaagtgtgtgtgaatatccaaatcttgaaacaattgggaag |
7475 |
T |
|
| Q |
661 |
aaaatcgtaggaaagtgtggagggttgccttt |
692 |
Q |
| |
|
||||| || | |||||||||||||||||||| |
|
|
| T |
7476 |
aaaatagtggacaagtgtggagggttgccttt |
7507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 167 - 692
Target Start/End: Original strand, 6572800 - 6573325
Alignment:
| Q |
167 |
caataatcagcatggtgggtctaggtggaatgggaaaaaccacccttgctcaacttgtgtacaataacaacatgatgcagaaacagtttgaactaaaagc |
266 |
Q |
| |
|
||||||||||||| |||||| | ||||| ||||| || |||||||||||||| ||||| |||||| || | | |||| ||||||||||||| || ||||| |
|
|
| T |
6572800 |
caataatcagcatagtgggtttgggtgggatggggaagaccacccttgctcagcttgtctacaatgaccagaggatggagaaacagtttgaccttaaagc |
6572899 |
T |
|
| Q |
267 |
ctgggtctatgtttcggaaactttcaatgttgttggacttaccaaagcaattttgcggtcatttcactctttggctgatggtgaagacttgaatctaccc |
366 |
Q |
| |
|
|||||| |||| || || | || ||| ||||||||| |||||| ||||| | ||||||| || ||||| || || |||||||||||| ||| || | |
|
|
| T |
6572900 |
ttgggtccatgtctcaaaatcatttgatgctgttggactcaccaaaacaattcttaggtcattccattcttttgcagacggtgaagacttggatccactc |
6572999 |
T |
|
| Q |
367 |
caacatcaattgcagcagagactaacaggaaagaaatatctgcttgttttggatgatgtctggaacggtagtgcggaatgttgggagcgcttactacttc |
466 |
Q |
| |
|
|||| | || ||| |||| | | |||| || |||||||||| | |||||||| ||||| || | || ||| |||| ||||| ||||||||| |
|
|
| T |
6573000 |
atttgtcaactacaaaagacactatccgtcaagagatttctgcttgttctagatgatgtgtggaaagggaatgaggagtgtttggagcaattactacttt |
6573099 |
T |
|
| Q |
467 |
cttttaacaatggatctaccggaagtaagattattgtgacaacacgtgacaaggaggtagcatcagtcatgaagtccaccaaacttcttcatttgaagca |
566 |
Q |
| |
|
|||| ||| |||||| | ||||| |||||||||||||||||||||||||| | || |||| |||||||| || | | | |||| ||| ||| | |
|
|
| T |
6573100 |
ctttcaaccatggatttttaggaagcaagattattgtgacaacacgtgacaaaaacgttgcattggtcatgaaatctgaccatcaacttcttttaaagaa |
6573199 |
T |
|
| Q |
567 |
attggagaagagtgaatgttggagtatgtttatgagacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattggcaagaaaatc |
666 |
Q |
| |
|
|||||| ||| || ||||||||| | ||| ||| ||| ||||||| || | ||||| ||| ||||||||||||||||| ||||||||| | || |
|
|
| T |
6573200 |
tttggaggagaaagattgttggagtttatttgtgaaacatgcttttcgaggaaaaaatgtgtttgactatccaaatcttgaatcgattggcaaggagatt |
6573299 |
T |
|
| Q |
667 |
gtaggaaagtgtggagggttgccttt |
692 |
Q |
| |
|
|||| || ||||||||||||||||| |
|
|
| T |
6573300 |
gtagacaaatgtggagggttgccttt |
6573325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 575 - 692
Target Start/End: Original strand, 25242067 - 25242187
Alignment:
| Q |
575 |
agagtgaatgttggagtatgtttatgagacacgcttttcacggcacaaatgcaagtgaatatccaaatcttgaatcaattggcaagaa---aatcgtagg |
671 |
Q |
| |
|
||||||| ||||||||| ||||| ||| || ||||||||||| | ||||||||||||||||||||||||| ||||||||||||||| ||| |||| |
|
|
| T |
25242067 |
agagtgattgttggagtgtgtttgagaggcatgcttttcacggaaggaatgcaagtgaatatccaaatcttgcatcaattggcaagaaaataatagtaga |
25242166 |
T |
|
| Q |
672 |
aaagtgtggagggttgccttt |
692 |
Q |
| |
|
||||||||||| ||||||||| |
|
|
| T |
25242167 |
aaagtgtggagcgttgccttt |
25242187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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