View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0024_low_5 (Length: 282)

Name: NF0024_low_5
Description: NF0024
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0024_low_5
NF0024_low_5
[»] chr2 (40 HSPs)
chr2 (51-249)||(27397005-27397211)
chr2 (49-249)||(21696553-21696761)
chr2 (49-229)||(34268287-34268475)
chr2 (49-249)||(19449776-19449985)
chr2 (49-221)||(23117472-23117652)
chr2 (49-221)||(20844591-20844771)
chr2 (57-272)||(34297797-34298019)
chr2 (49-221)||(28888930-28889110)
chr2 (49-221)||(27427837-27428018)
chr2 (49-221)||(31868173-31868353)
chr2 (57-221)||(37384353-37384525)
chr2 (57-195)||(11628557-11628703)
chr2 (50-221)||(12662166-12662346)
chr2 (57-272)||(19409856-19410078)
chr2 (57-272)||(39896717-39896939)
chr2 (57-195)||(3789167-3789313)
chr2 (57-195)||(13929983-13930129)
chr2 (57-272)||(16168126-16168348)
chr2 (57-272)||(27810351-27810573)
chr2 (57-272)||(37945237-37945459)
chr2 (57-195)||(16822710-16822856)
chr2 (57-195)||(16898624-16898770)
chr2 (57-195)||(21670545-21670691)
chr2 (57-195)||(37932101-37932247)
chr2 (57-272)||(9343359-9343581)
chr2 (57-221)||(12709996-12710168)
chr2 (57-221)||(31882969-31883141)
chr2 (57-272)||(37679270-37679492)
chr2 (57-272)||(37694535-37694757)
chr2 (57-195)||(254024-254170)
chr2 (57-195)||(22921516-22921662)
chr2 (57-195)||(32056476-32056622)
chr2 (57-195)||(34161565-34161711)
chr2 (57-221)||(27123198-27123370)
chr2 (57-272)||(12593462-12593684)
chr2 (57-195)||(39045254-39045401)
chr2 (57-195)||(27782947-27783093)
chr2 (110-214)||(34868339-34868443)
chr2 (57-191)||(40240251-40240393)
chr2 (57-98)||(3790473-3790514)
[»] chr1 (15 HSPs)
chr1 (49-249)||(20333793-20334001)
chr1 (51-249)||(20467458-20467664)
chr1 (49-221)||(14692293-14692473)
chr1 (49-221)||(14694975-14695155)
chr1 (49-221)||(14697659-14697839)
chr1 (49-228)||(16201407-16201594)
chr1 (49-227)||(21891126-21891312)
chr1 (49-221)||(14700340-14700520)
chr1 (57-214)||(51644931-51645096)
chr1 (57-221)||(10969345-10969517)
chr1 (57-221)||(41786718-41786890)
chr1 (57-195)||(10951820-10951966)
chr1 (57-191)||(3647879-3648021)
chr1 (57-221)||(28156407-28156579)
chr1 (57-191)||(28591813-28591955)
[»] chr7 (34 HSPs)
chr7 (49-249)||(16047981-16048189)
chr7 (49-249)||(16443264-16443472)
chr7 (49-272)||(26508968-26509198)
chr7 (49-249)||(10848253-10848461)
chr7 (49-221)||(5154759-5154939)
chr7 (49-272)||(16511708-16511939)
chr7 (49-221)||(2161248-2161427)
chr7 (48-221)||(10910208-10910389)
chr7 (49-221)||(5165060-5165240)
chr7 (49-221)||(11418062-11418242)
chr7 (57-221)||(2779920-2780092)
chr7 (57-221)||(22148564-22148736)
chr7 (57-221)||(22152791-22152963)
chr7 (57-221)||(22208706-22208878)
chr7 (57-272)||(26663179-26663401)
chr7 (57-272)||(26678371-26678593)
chr7 (57-272)||(31083890-31084113)
chr7 (110-221)||(3451927-3452038)
chr7 (57-195)||(31130618-31130765)
chr7 (57-195)||(26441967-26442113)
chr7 (110-214)||(45393923-45394027)
chr7 (57-195)||(26313130-26313277)
chr7 (57-195)||(4138512-4138658)
chr7 (57-195)||(4206098-4206244)
chr7 (57-195)||(16744787-16744933)
chr7 (57-221)||(39206431-39206603)
chr7 (57-221)||(45737977-45738149)
chr7 (57-195)||(24585802-24585949)
chr7 (57-195)||(26596378-26596525)
chr7 (57-214)||(31557671-31557837)
chr7 (110-214)||(11447592-11447696)
chr7 (110-214)||(26519511-26519615)
chr7 (57-214)||(26268353-26268517)
chr7 (57-189)||(5140604-5140744)
[»] chr4 (28 HSPs)
chr4 (49-249)||(15234500-15234708)
chr4 (49-272)||(24585747-24585978)
chr4 (49-249)||(1906949-1907157)
chr4 (49-249)||(15379614-15379822)
chr4 (49-245)||(15276002-15276206)
chr4 (49-221)||(14671699-14671879)
chr4 (50-221)||(17019738-17019917)
chr4 (57-221)||(14752900-14753072)
chr4 (57-221)||(6576545-6576718)
chr4 (57-221)||(36323721-36323893)
chr4 (57-221)||(36337930-36338102)
chr4 (57-221)||(39857324-39857496)
chr4 (57-195)||(54840126-54840272)
chr4 (57-272)||(20331819-20332041)
chr4 (57-221)||(24119350-24119523)
chr4 (57-195)||(27156710-27156856)
chr4 (57-195)||(31119894-31120040)
chr4 (57-195)||(40099017-40099163)
chr4 (57-272)||(5012540-5012763)
chr4 (57-221)||(5701238-5701410)
chr4 (57-229)||(34182341-34182521)
chr4 (57-191)||(18794027-18794169)
chr4 (57-195)||(21976439-21976585)
chr4 (110-214)||(33667246-33667350)
chr4 (57-191)||(14105283-14105425)
chr4 (110-214)||(30760480-30760584)
chr4 (57-98)||(24814685-24814726)
chr4 (57-98)||(24813781-24813822)
[»] chr8 (25 HSPs)
chr8 (49-249)||(22074267-22074475)
chr8 (49-221)||(15774251-15774431)
chr8 (49-272)||(16260564-16260795)
chr8 (49-243)||(19694771-19694973)
chr8 (49-221)||(2130623-2130803)
chr8 (49-272)||(19654681-19654912)
chr8 (49-219)||(14569834-14570012)
chr8 (49-219)||(22139593-22139771)
chr8 (49-220)||(21341525-21341705)
chr8 (49-221)||(18797386-18797566)
chr8 (49-221)||(33249040-33249220)
chr8 (49-221)||(19910522-19910702)
chr8 (57-221)||(18716159-18716331)
chr8 (49-221)||(27602268-27602448)
chr8 (57-272)||(12086075-12086297)
chr8 (57-272)||(29835976-29836198)
chr8 (57-195)||(33265449-33265595)
chr8 (57-186)||(31361267-31361404)
chr8 (57-272)||(28355299-28355521)
chr8 (57-214)||(31483218-31483383)
chr8 (110-214)||(44567690-44567794)
chr8 (110-214)||(19681166-19681270)
chr8 (57-195)||(19201730-19201877)
chr8 (57-191)||(9361337-9361478)
chr8 (57-98)||(15775288-15775329)
[»] chr3 (60 HSPs)
chr3 (50-249)||(15367877-15368085)
chr3 (49-249)||(16617907-16618116)
chr3 (49-221)||(5658774-5658954)
chr3 (49-229)||(15886157-15886345)
chr3 (49-229)||(16422839-16423027)
chr3 (49-221)||(18057908-18058088)
chr3 (49-221)||(22381020-22381200)
chr3 (49-221)||(29142194-29142374)
chr3 (49-243)||(4690293-4690495)
chr3 (49-249)||(22041041-22041250)
chr3 (49-221)||(4728266-4728446)
chr3 (49-221)||(6208535-6208715)
chr3 (53-229)||(19701049-19701233)
chr3 (57-221)||(11103809-11103981)
chr3 (49-219)||(8282900-8283078)
chr3 (51-221)||(15734558-15734736)
chr3 (57-221)||(31029691-31029863)
chr3 (49-219)||(18337266-18337444)
chr3 (49-221)||(4790071-4790251)
chr3 (57-221)||(5473629-5473801)
chr3 (57-221)||(18285804-18285976)
chr3 (57-221)||(18301105-18301277)
chr3 (49-221)||(35887400-35887580)
chr3 (57-221)||(4630421-4630593)
chr3 (57-221)||(4340124-4340296)
chr3 (57-272)||(24334788-24335010)
chr3 (57-221)||(32445792-32445964)
chr3 (57-195)||(5020399-5020545)
chr3 (57-221)||(4423558-4423730)
chr3 (57-204)||(10649749-10649904)
chr3 (57-195)||(28109388-28109534)
chr3 (57-214)||(6536168-6536333)
chr3 (121-221)||(7079868-7079968)
chr3 (57-195)||(18231880-18232026)
chr3 (57-195)||(22864289-22864435)
chr3 (57-195)||(22879348-22879494)
chr3 (57-195)||(28345859-28346005)
chr3 (59-195)||(17978378-17978522)
chr3 (60-195)||(5717743-5717886)
chr3 (60-195)||(5728653-5728796)
chr3 (60-195)||(5763572-5763715)
chr3 (57-272)||(29658392-29658614)
chr3 (57-195)||(5602738-5602884)
chr3 (57-221)||(20072675-20072847)
chr3 (57-221)||(48472572-48472744)
chr3 (57-195)||(5589781-5589927)
chr3 (57-195)||(16404217-16404363)
chr3 (57-195)||(20570281-20570427)
chr3 (57-195)||(31957881-31958027)
chr3 (57-214)||(47030124-47030290)
chr3 (57-195)||(17970305-17970452)
chr3 (57-191)||(18249410-18249552)
chr3 (57-191)||(21681412-21681554)
chr3 (57-195)||(32297319-32297465)
chr3 (110-214)||(51788691-51788795)
chr3 (57-195)||(28027959-28028105)
chr3 (57-191)||(10402844-10402986)
chr3 (110-191)||(8218317-8218398)
chr3 (57-98)||(7080022-7080063)
chr3 (57-98)||(16599406-16599447)
[»] scaffold0109 (1 HSPs)
scaffold0109 (52-249)||(27966-28169)
[»] chr5 (51 HSPs)
chr5 (49-249)||(22895084-22895292)
chr5 (49-243)||(23898558-23898761)
chr5 (49-221)||(23726922-23727102)
chr5 (49-218)||(22992417-22992594)
chr5 (49-221)||(24608930-24609110)
chr5 (49-221)||(24976529-24976709)
chr5 (50-219)||(25206996-25207173)
chr5 (50-219)||(25271152-25271329)
chr5 (57-221)||(9544012-9544184)
chr5 (57-221)||(37351948-37352120)
chr5 (57-217)||(6881002-6881170)
chr5 (50-220)||(23632656-23632834)
chr5 (52-221)||(30941315-30941492)
chr5 (57-214)||(28953079-28953244)
chr5 (49-221)||(33299221-33299401)
chr5 (49-221)||(33784167-33784347)
chr5 (57-219)||(18121717-18121888)
chr5 (49-219)||(11556041-11556219)
chr5 (57-221)||(15652045-15652217)
chr5 (57-195)||(15752142-15752288)
chr5 (49-189)||(13180093-13180241)
chr5 (59-195)||(37745635-37745779)
chr5 (57-221)||(41681390-41681564)
chr5 (57-195)||(30036157-30036303)
chr5 (57-221)||(31438142-31438314)
chr5 (57-272)||(40466833-40467055)
chr5 (57-191)||(43084989-43085124)
chr5 (57-204)||(8658777-8658932)
chr5 (57-195)||(33523115-33523261)
chr5 (57-214)||(12138874-12139039)
chr5 (57-195)||(18494052-18494198)
chr5 (57-221)||(2517750-2517922)
chr5 (57-221)||(24730654-24730826)
chr5 (57-195)||(9324194-9324341)
chr5 (57-195)||(26487104-26487251)
chr5 (110-272)||(37761629-37761790)
chr5 (57-195)||(30175199-30175345)
chr5 (110-195)||(31819766-31819851)
chr5 (57-195)||(32589559-32589705)
chr5 (57-195)||(34623230-34623376)
chr5 (57-214)||(3796245-3796410)
chr5 (57-221)||(30158725-30158897)
chr5 (57-183)||(5644543-5644677)
chr5 (57-191)||(11330369-11330511)
chr5 (57-195)||(33881837-33881983)
chr5 (57-195)||(28655976-28656122)
chr5 (57-272)||(13318110-13318332)
chr5 (57-195)||(13435953-13436099)
chr5 (57-191)||(18368814-18368956)
chr5 (57-195)||(37664788-37664934)
chr5 (57-98)||(13178783-13178824)
[»] scaffold0322 (2 HSPs)
scaffold0322 (49-249)||(12722-12931)
scaffold0322 (57-195)||(2383-2529)
[»] chr6 (46 HSPs)
chr6 (57-272)||(27623058-27623272)
chr6 (51-269)||(27283707-27283924)
chr6 (49-221)||(16756497-16756677)
chr6 (49-221)||(27209575-27209755)
chr6 (49-221)||(27239473-27239653)
chr6 (49-243)||(22928198-22928400)
chr6 (49-221)||(24870384-24870564)
chr6 (50-221)||(24299105-24299284)
chr6 (57-221)||(33369781-33369953)
chr6 (49-219)||(15405874-15406052)
chr6 (49-219)||(15417661-15417839)
chr6 (49-220)||(27031698-27031877)
chr6 (57-221)||(4539110-4539282)
chr6 (57-221)||(14138752-14138924)
chr6 (49-221)||(27025818-27025998)
chr6 (57-217)||(29508101-29508269)
chr6 (49-221)||(13292288-13292469)
chr6 (49-221)||(26927428-26927608)
chr6 (57-221)||(27014400-27014572)
chr6 (57-195)||(27200899-27201045)
chr6 (57-195)||(27248188-27248334)
chr6 (57-221)||(26109752-26109925)
chr6 (57-221)||(29556232-29556404)
chr6 (57-272)||(28214094-28214316)
chr6 (57-195)||(4764464-4764610)
chr6 (57-221)||(26792492-26792664)
chr6 (57-272)||(34457837-34458059)
chr6 (57-195)||(30551331-30551477)
chr6 (57-272)||(27064127-27064349)
chr6 (57-195)||(13517545-13517691)
chr6 (57-195)||(27355434-27355580)
chr6 (57-221)||(4531970-4532142)
chr6 (56-187)||(20131229-20131369)
chr6 (56-187)||(22201501-22201641)
chr6 (57-221)||(28167170-28167342)
chr6 (57-272)||(29579660-29579882)
chr6 (57-191)||(8899028-8899170)
chr6 (57-214)||(26665988-26666153)
chr6 (57-214)||(26771959-26772124)
chr6 (57-195)||(27491840-27491987)
chr6 (110-191)||(16680865-16680946)
chr6 (57-191)||(16937357-16937499)
chr6 (110-214)||(4779594-4779698)
chr6 (56-99)||(20175368-20175411)
chr6 (56-99)||(22160580-22160623)
chr6 (57-98)||(16680966-16681007)
[»] scaffold0093 (1 HSPs)
scaffold0093 (49-221)||(472-652)
[»] scaffold0241 (1 HSPs)
scaffold0241 (49-249)||(25946-26154)
[»] scaffold0240 (1 HSPs)
scaffold0240 (52-221)||(24353-24530)
[»] scaffold0792 (1 HSPs)
scaffold0792 (49-221)||(3992-4172)
[»] scaffold0547 (1 HSPs)
scaffold0547 (49-220)||(9037-9217)
[»] scaffold0143 (2 HSPs)
scaffold0143 (50-221)||(33972-34151)
scaffold0143 (57-214)||(10625-10791)
[»] scaffold0038 (1 HSPs)
scaffold0038 (57-272)||(14592-14814)
[»] scaffold0099 (1 HSPs)
scaffold0099 (110-221)||(40067-40180)
[»] scaffold0418 (1 HSPs)
scaffold0418 (57-221)||(12716-12888)
[»] scaffold0237 (1 HSPs)
scaffold0237 (57-221)||(8325-8497)
[»] scaffold0159 (2 HSPs)
scaffold0159 (57-195)||(2561-2707)
scaffold0159 (147-195)||(18534-18582)
[»] scaffold0336 (1 HSPs)
scaffold0336 (110-191)||(16306-16387)
[»] scaffold0089 (1 HSPs)
scaffold0089 (156-221)||(6742-6807)


Alignment Details
Target: chr2 (Bit Score: 142; Significance: 1e-74; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 51 - 249
Target Start/End: Complemental strand, 27397211 - 27397005
Alignment:
Q  51 agagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgta 142  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| |        ||| |||||||||||||||||||||||||||||||||    
T  27397211 agagacagacaagacattggagtattgggcacgtagtggctcgtgctatatcacacattcttggaaatcctctttggagataacgtcgttgggagacgta 27397112  T
Q  143 tcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtcagt 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||| ||| ||||| |||||    
T  27397111 tcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactccgctggggataatgccgtcatcgctgggcatttcagt 27397012  T
Q  243 gttgggt 249  Q
    |||||||    
T  27397011 gttgggt 27397005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 49 - 249
Target Start/End: Original strand, 21696553 - 21696761
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgc-----taca---tcatagaagtcctctttggagataacgtcgttgggagacg 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||     ||||   || | ||| |||||||||||||||||| ||||||||||||    
T  21696553 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgcaatattacacattcctggaaatcctctttggagataacgccgttgggagacg 21696652  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtca 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||| |||||||| ||||| |||    
T  21696653 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaaggctctactggggataatgccgtcattgctgggcatttca 21696752  T
Q  241 gtgttgggt 249  Q
    ||| |||||    
T  21696753 gtgctgggt 21696761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 49 - 229
Target Start/End: Original strand, 34268287 - 34268475
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgcta-------cat-catagaagtcctctttggagataacgtcgttgggagacg 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||       ||| | | ||| |||||||||||||||||||||||||||||||    
T  34268287 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatgttacacattcctggaaatcctctttggagataacgtcgttgggagacg 34268386  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgc 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||  |||||||    
T  34268387 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactggggataatgctgtcattgc 34268475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 49 - 249
Target Start/End: Original strand, 19449776 - 19449985
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatca--------tagaagtcctctttggagataacgtcgttgggagacg 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||        ||||| |||||||||||||||||||||||||||||||    
T  19449776 gcagagacagacaagacattggagtattgggcacgtagtggctcgcgctatatcacacattcttagaaatcctctttggagataacgtcgttgggagacg 19449875  T
Q  141 tatcggaaccatggctgagggcaggtagc-tatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtc 239  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||| ||||| |||||| || |||| ||| ||||| ||    
T  19449876 tatcggaaccatggctgagggcgggtagcatatgcaacttgctggggatagaatctcggaagactccgctggagataataccgtcatcgctgggcatttc 19449975  T
Q  240 agtgttgggt 249  Q
    ||||||||||    
T  19449976 agtgttgggt 19449985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 23117652 - 23117472
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||| ||    
T  23117652 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggaggcg 23117553  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||| ||||| ||||||||    
T  23117552 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgggagactctactgggaataatgcc 23117472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 20844771 - 20844591
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||| ||||||||| |||||||| |||||||||||| || | |        ||| || ||||||||||| ||||||||||||||||    
T  20844771 gcagagacagacaagacactggagtattaggcacgtaatggctcgtgctatattacacattcctggaaatcatctttggagatgacgtcgttgggagacg 20844672  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||    
T  20844671 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactgggaataatgcc 20844591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 57 - 272
Target Start/End: Complemental strand, 34298019 - 34297797
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  34298019 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 34297920  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtcagtgttggg 248  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||| | |||||| |   |||| ||||| |||||| ||||    
T  34297919 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctactgggaaaaatgccgt-tgtgctgggcatttcagtgctggg 34297821  T
Q  249 tatgtcatagatatcgcatctgtg 272  Q
    |||||  |||| || |||||||||    
T  34297820 tatgttgtagacattgcatctgtg 34297797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 28889110 - 28888930
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    ||||||||||||||||  ||||||||||||||| |||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||    
T  28889110 gcagagacagacaagatgttggagtattgggcatgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 28889011  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||| ||||||||    
T  28889010 tatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgcc 28888930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 27427837 - 27428018
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||| || | |        ||| ||||| |||||||| ||||||||||||||||    
T  27427837 gcagagacagacaagacactggagtattgggcacgtaatggctcgtgctatattacacattcctggaaatcctccttggagatgacgtcgttgggagacg 27427936  T
Q  141 tatcggaaccatggctgagggcaggtagc-tatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||| | ||||| ||||||||    
T  27427937 tatcggaaccatggctgagggcaggtagcttatgcaacttgctggggacagaatctcggaagactatactgggaataatgcc 27428018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 31868173 - 31868353
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||    
T  31868173 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 31868272  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||| |||  |||||||||| ||||| |||| |||||| ||||||||||||||| ||||||||| ||||| ||||||||    
T  31868273 tatcgggacctaggctgagggccggtaggtatgaaacttgatggggatagaatctcggaagactctactgggaataatgcc 31868353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 37384525 - 37384353
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| || ||| ||||||| ||||||||||||||||||||||||    
T  37384525 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaattcttctgtggagatgacgtcgttgggagacgtatcggaa 37384426  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||| | ||||||||    
T  37384425 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctactgagaataatgcc 37384353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 11628557 - 11628703
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| ||||||    
T  11628557 agacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 11628656  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  11628657 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatct 11628703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 50 - 221
Target Start/End: Complemental strand, 12662346 - 12662166
Alignment:
Q  50 cagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgt 141  Q
    ||||||||||||||||| |||||| ||||||||| |||||||||||||| || | |        ||| |||||||||||||| |||||||||||||||||    
T  12662346 cagagacagacaagacactggagtgttgggcacgcagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgt 12662247  T
Q  142 atcggaaccatggctgagggcaggtagctatgcaacttgc-tggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||||| ||||||||||||||||||||| |||||||||||| || |||||||||||| ||||||||| ||||| ||||||||    
T  12662246 atcgggaccatggctgagggcaggtaggtatgcaacttgcttgaggatagaatctcggaagactctactgggaataatgcc 12662166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 57 - 272
Target Start/End: Original strand, 19409856 - 19410078
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||| ||| ||||||||||||||||||||||||    
T  19409856 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggggatgacgtcgttgggagacgtatcggaa 19409955  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtcagtgttggg 248  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||  |||||| |  ||||||| || ||| |   |||| ||||| |||||| ||||    
T  19409956 ccatggctgagggcaggtagctatgcatcttgctggggatagaatcttggaagaccccactggggaaaacgccgt-tgtgctgggcatttcagtgctggg 19410054  T
Q  249 tatgtcatagatatcgcatctgtg 272  Q
    |||||  |||| || |||||||||    
T  19410055 tatgttgtagacattgcatctgtg 19410078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 57 - 272
Target Start/End: Complemental strand, 39896939 - 39896717
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  || |||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  39896939 agacaagacatcagaatattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 39896840  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtcagtgttggg 248  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||  ||||||| | ||||||| || ||| |   |||| ||||| |||||| ||||    
T  39896839 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatcttggaagactttactggggaaaacgccgt-tgtgctgggcatttcagtgctggg 39896741  T
Q  249 tatgtcatagatatcgcatctgtg 272  Q
    || ||  | |||||||||||||||    
T  39896740 tacgttgtggatatcgcatctgtg 39896717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 3789313 - 3789167
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| ||||||    
T  3789313 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggaa 3789214  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  3789213 ccatggctgagggcaggtagctatgcatcttgctggggatagaatct 3789167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 13929983 - 13930129
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  13929983 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 13930082  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||    
T  13930083 ccatggctgagggcaggtagctaaacaacttgctggagatagaatct 13930129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 57 - 272
Target Start/End: Complemental strand, 16168348 - 16168126
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| ||||||    
T  16168348 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 16168249  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctg-ctggggataatgccctcattgctaggcatgtcagtgttgg 247  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||||||  |||||| ||| ||||||| |||||| |   |||| ||||| |||||| |||    
T  16168248 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagac-ctgactggggaaaatgccgt-tgtgctgggcatttcagtgctgg 16168151  T
Q  248 gtatgtcatagatatcgcatctgtg 272  Q
    ||||||  |||| || |||||||||    
T  16168150 gtatgttgtagacattgcatctgtg 16168126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 57 - 272
Target Start/End: Complemental strand, 27810573 - 27810351
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| ||||||    
T  27810573 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 27810474  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctg-ctggggataatgccctcattgctaggcatgtcagtgttgg 247  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||||||  |||||| ||| ||||||| |||||| |   |||| ||||| |||||| |||    
T  27810473 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagac-ctgactggggaaaatgccgt-tgtgctgggcatttcagtgctgg 27810376  T
Q  248 gtatgtcatagatatcgcatctgtg 272  Q
    ||||||  |||| || |||||||||    
T  27810375 gtatgttgtagacattgcatctgtg 27810351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 57 - 272
Target Start/End: Original strand, 37945237 - 37945459
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| |||||||||||||| || ||||||    
T  37945237 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagatgtgtcggaa 37945336  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctg-ctggggataatgccctcattgctaggcatgtcagtgttgg 247  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||||||  |||||| ||| ||||||| |||||| |   |||| ||||| ||||||||||    
T  37945337 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagac-ctgactggggaaaatgccgt-tgtgctgggcatttcagtgttgg 37945434  T
Q  248 gtatgtcatagatatcgcatctgtg 272  Q
    ||||||  |||| || |||||||||    
T  37945435 gtatgttgtagacattgcatctgtg 37945459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 16822710 - 16822856
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| ||||||    
T  16822710 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 16822809  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||    
T  16822810 ccatagctgagggcaggtagctatgcatcttgctggggatagaatct 16822856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 16898770 - 16898624
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| ||||||    
T  16898770 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 16898671  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||    
T  16898670 ccatagctgagggcaggtagctatgcatcttgctggggatagaatct 16898624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 21670545 - 21670691
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| ||||||    
T  21670545 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 21670644  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||||||    
T  21670645 ccatagctgagggcaggtagatatgcaacttgctggagatagaatct 21670691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 37932247 - 37932101
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||| ||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| ||||||    
T  37932247 agacaagacatcagagcattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggaa 37932148  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  37932147 ccatggctgagggcaggtagctatgcatcttgctggggatagaatct 37932101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 57 - 272
Target Start/End: Original strand, 9343359 - 9343581
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||| ||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| ||||||    
T  9343359 agacaagacattagagtattgggcacgtagtgactcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 9343458  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctg-ctggggataatgccctcattgctaggcatgtcagtgttgg 247  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||||||  |||||| ||| ||||||| |||||| |   |||| ||||| |||||| |||    
T  9343459 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagac-ctgactggggaaaatgccgt-tgtgctgggcatttcagtgctgg 9343556  T
Q  248 gtatgtcatagatatcgcatctgtg 272  Q
    ||||||  |||| || |||||||||    
T  9343557 gtatgttgtagacattgcatctgtg 9343581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 57 - 221
Target Start/End: Original strand, 12709996 - 12710168
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||| ||||||| || | |        ||| |||||||||||||| ||||||||||||||||||| ||||    
T  12709996 agacaagacatcagagtattgggcacgtagtggcccgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtattggaa 12710095  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||    ||||| | ||||||||||||||    
T  12710096 ccatggctgagggcaggtaggtatgccacttgctggggatagaatcttgagagactttactggggataatgcc 12710168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 31883141 - 31882969
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| |||||||||||||||||||| |||    
T  31883141 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcagaa 31883042  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||| |||||||||||||||| ||||||||||||||| ||||||||||  ||||||| | | ||||| ||||||    
T  31883041 ccaaggctgagggcaggtaggtatgcaacttgctggagatagaatcttggaagactttaccggggacaatgcc 31882969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 57 - 272
Target Start/End: Original strand, 37679270 - 37679492
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||  |||||| ||||||| ||||||||||||||||||||||||    
T  37679270 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaa 37679369  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctg-ctggggataatgccctcattgctaggcatgtcagtgttgg 247  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||||||  |||||| ||| ||||||| |||||| |   |||| ||||| |||||| |||    
T  37679370 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagac-ctgactggggaaaatgccgt-tgtgctgggcatttcagtgctgg 37679467  T
Q  248 gtatgtcatagatatcgcatctgtg 272  Q
    ||||||  |||| || |||||||||    
T  37679468 gtatgttgtagacattgcatctgtg 37679492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 57 - 272
Target Start/End: Original strand, 37694535 - 37694757
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||  |||||| ||||||| ||||||||||||||||||||||||    
T  37694535 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaa 37694634  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctg-ctggggataatgccctcattgctaggcatgtcagtgttgg 247  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||||||  |||||| ||| ||||||| |||||| |   |||| ||||| |||||| |||    
T  37694635 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagac-ctgactggggaaaatgccgt-tgtgctgggcatttcagtgctgg 37694732  T
Q  248 gtatgtcatagatatcgcatctgtg 272  Q
    ||||||  |||| || |||||||||    
T  37694733 gtatgttgtagacattgcatctgtg 37694757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 254024 - 254170
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| ||||||    
T  254024 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 254123  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    |||| ||||||||||||||| ||| ||||||||||| ||||||||||    
T  254124 ccatagctgagggcaggtagatatacaacttgctggagatagaatct 254170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 22921516 - 22921662
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| ||||||    
T  22921516 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 22921615  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||||||    
T  22921616 ccatagctgagggcaggtagatatgcaacttgctggagatagaatct 22921662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 32056622 - 32056476
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| |||||||||||||| || ||||||    
T  32056622 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagatgtgtcggaa 32056523  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||    
T  32056522 ccatagctgagggcaggtagctatgcatcttgctggggatagaatct 32056476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 34161711 - 34161565
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgcta-------cat-catagaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| |||||||||||||||||||||||||||||       ||| | | ||| |||||||||||||| |||||||||||||||||||| ||     
T  34161711 agacaagacattagagtattgggcacgtagtggctcgtgctatgttacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcagag 34161612  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    ||| |||||||||| ||||| ||||||||||||||||||||||||||    
T  34161611 ccaaggctgagggctggtaggtatgcaacttgctggggatagaatct 34161565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 27123370 - 27123198
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| |||| |    
T  27123370 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggga 27123271  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||  |||||||||| ||||||||||||||||||||||||||||||||  | ||||||| ||||  ||||||||    
T  27123270 cctaggctgagggccggtagctatgcaacttgctggggatagaatcttgggagactctactggaaataatgcc 27123198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 57 - 272
Target Start/End: Complemental strand, 12593684 - 12593462
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgcta-------catcatagaag-tcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| |||||||||||||||||||||||||||||       |||  | | || |||||| ||||||| ||||||||||||||||||||||||    
T  12593684 agacaagacattagagtattgggcacgtagtggctcgtgctatgttacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaa 12593585  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctg-ctggggataatgccctcattgctaggcatgtcagtgttgg 247  Q
    ||||||| |||||| ||||| ||||||||||||||| ||||||||||  |||||| ||| ||||||| |||||| |   |||| ||||| |||||| |||    
T  12593584 ccatggccgagggccggtaggtatgcaacttgctggagatagaatcttggaagac-ctgactggggaaaatgccgt-tgtgctgggcatttcagtgctgg 12593487  T
Q  248 gtatgtcatagatatcgcatctgtg 272  Q
    ||||||  |||| || |||||||||    
T  12593486 gtatgttgtagacattgcatctgtg 12593462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 39045254 - 39045401
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgcta-------cat-catagaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| |||||||||||||||||||||||||||||       ||| | | ||| |||||||||||||| ||||||||||||||||| ||||||    
T  39045254 agacaagacattagagtattgggcacgtagtggctcgtgctatgttacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 39045353  T
Q  149 ccatggctgagggcaggtagctatgcaac-ttgctggggatagaatct 195  Q
    |||| ||||||||||||||| |||||||| ||||||| ||||||||||    
T  39045354 ccatagctgagggcaggtagatatgcaactttgctggagatagaatct 39045401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 27783093 - 27782947
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||| ||||||| | |||||||| |||||||||||||    
T  27783093 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctatggagatgatgtcgttggtagacgtatcggaa 27782994  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    ||||||| |||||| ||||| |||| |||||||||||||||||||||    
T  27782993 ccatggccgagggccggtaggtatgtaacttgctggggatagaatct 27782947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 34868443 - 34868339
Alignment:
Q  110 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 209  Q
    |||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||| || ||||||||||||||| ||||||||||  ||||||| | ||    
T  34868443 tcctctttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttact 34868344  T
Q  210 gggga 214  Q
    |||||    
T  34868343 gggga 34868339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 57 - 191
Target Start/End: Complemental strand, 40240393 - 40240251
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgcta-------catcatagaag-tcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    ||||||||| || |||||||||||||||||||||||||||||       |||  | | || |||||| ||||||| ||||||||||||||||||||||||    
T  40240393 agacaagacgttagagtattgggcacgtagtggctcgtgctatgttacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaa 40240294  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggataga 191  Q
    ||||||| |||||| ||||| |||| |||||||||||||||||    
T  40240293 ccatggccgagggccggtaggtatgtaacttgctggggataga 40240251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 3790514 - 3790473
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgcta 98  Q
    |||||||||||| ||||||||||||||| |||||||||||||    
T  3790514 agacaagacattagagtattgggcacgtggtggctcgtgcta 3790473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 140; Significance: 2e-73; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 49 - 249
Target Start/End: Original strand, 20333793 - 20334001
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||||||||||||||||||||    
T  20333793 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagataacgtcgttgggagacg 20333892  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtca 240  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||| |||    
T  20333893 tatcggaaccatggccgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccatcactgctgggcatttca 20333992  T
Q  241 gtgttgggt 249  Q
    ||| |||||    
T  20333993 gtgctgggt 20334001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 51 - 249
Target Start/End: Complemental strand, 20467664 - 20467458
Alignment:
Q  51 agagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgta 142  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||| || | |        ||| |||||||||||||||||||||||||||||| ||    
T  20467664 agagacagacaaggcattggagtattggccacgtagtggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagacata 20467565  T
Q  143 tcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtcagt 242  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||| ||| ||||| |||||    
T  20467564 tcggaaccatggctgagggtaggtagctatgtaacttgctggggatagaatctcggaagactctgctggggataatgccgtcatcgctgggcatttcagt 20467465  T
Q  243 gttgggt 249  Q
    |||||||    
T  20467464 gttgggt 20467458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 14692293 - 14692473
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||    
T  14692293 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 14692392  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    | ||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||| ||||| ||||||||    
T  14692393 tgtcggaaccatggctgagagcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgcc 14692473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 14694975 - 14695155
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||    
T  14694975 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 14695074  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    | ||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||| ||||| ||||||||    
T  14695075 tgtcggaaccatggctgagagcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgcc 14695155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 14697659 - 14697839
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||    
T  14697659 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 14697758  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    | ||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||| ||||| ||||||||    
T  14697759 tgtcggaaccatggctgagagcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgcc 14697839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 49 - 228
Target Start/End: Original strand, 16201407 - 16201594
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| || | |        ||| |||||||||||||||||  ||||||||||||    
T  16201407 gcagagacagacaagacattggagtattgggcacgtagtggctcatgctatattacacattcctggaaatcctctttggagataacaccgttgggagacg 16201506  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattg 228  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||| | ||||||    
T  16201507 tatcggaaccatgactgagggcaggtagctatgcaacttgctgggggtagaatctcggaagactctactggggataatgtcgtcattg 16201594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 49 - 227
Target Start/End: Original strand, 21891126 - 21891312
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    ||||||||| |||||||| |||||||||||||||||| |||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||    
T  21891126 gcagagacatacaagacactggagtattgggcacgtaatggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 21891225  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcatt 227  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||| |||||||| |||||    
T  21891226 tatcggaaccatggctgagggcaggtagctatgcatcttgctggggatagaatctcggaagactctactgggaataatgccgtcatt 21891312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 14700340 - 14700520
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||    
T  14700340 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 14700439  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    | ||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||| ||||| ||| ||||    
T  14700440 tgtcggaaccatggctgagagcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaatactgcc 14700520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 57 - 214
Target Start/End: Complemental strand, 51645096 - 51644931
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| ||||||||| |||| ||||||||||||||||||||||||    
T  51645096 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttgaagatgacgtcgttgggagacgtatcggaa 51644997  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctgggga 214  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||  ||||||| | |||||||    
T  51644996 ccatggctgagggcaggtagctatgcaacttgctggagatagaatcttggaagactttactgggga 51644931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 10969517 - 10969345
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||| ||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  10969517 agacaagacattagagtattgggcacgtagtgactcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 10969418  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||    ||||| | ||||||||||||||    
T  10969417 ccatggctgagggcaggtaggtatgccacttgctggggatagaatcttgagagactttactggggataatgcc 10969345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 57 - 221
Target Start/End: Original strand, 41786718 - 41786890
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    ||||||||| |  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  41786718 agacaagacgtcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 41786817  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||| ||||||||||||| || ||||||||||||||| ||||||||||   |||||| | ||||||||||||||    
T  41786818 ccacggctgagggcaggcaggtatgcaacttgctggagatagaatcttgaaagactttactggggataatgcc 41786890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 10951966 - 10951820
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| ||||||    
T  10951966 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 10951867  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    ||| |||||||||||||||||||  ||||||||||| ||||||||||    
T  10951866 ccacggctgagggcaggtagctaaacaacttgctggagatagaatct 10951820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 57 - 191
Target Start/End: Complemental strand, 3648021 - 3647879
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgcta-------catcatagaag-tcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| |||||||||||||||||||||||||||||       |||  | | || |||||| ||||||| ||||||||||||||||||||||||    
T  3648021 agacaagacattagagtattgggcacgtagtggctcgtgctatgttacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaa 3647922  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggataga 191  Q
    |||||||||||||||||||| |||| |||||||||||||||||    
T  3647921 ccatggctgagggcaggtaggtatgtaacttgctggggataga 3647879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 28156579 - 28156407
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| |||| |    
T  28156579 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggga 28156480  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||  |||||||||| ||||||||||||||||||||||||||||||||  | ||||||| ||||  ||||||||    
T  28156479 cctaggctgagggccggtagctatgcaacttgctggggatagaatcttgggagactctactggaaataatgcc 28156407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 57 - 191
Target Start/End: Complemental strand, 28591955 - 28591813
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| || |||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  28591955 agacaagacattagaatattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 28591856  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggataga 191  Q
    ||||||| |||||| ||||| |||| |||||||| ||||||||    
T  28591855 ccatggccgagggctggtaggtatgtaacttgctagggataga 28591813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 136; Significance: 5e-71; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 49 - 249
Target Start/End: Complemental strand, 16048189 - 16047981
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||||| ||||||||||||||    
T  16048189 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagataaagtcgttgggagacg 16048090  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtca 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||| ||| ||||| |||    
T  16048089 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctgttggggataatgccgtcatcgctgggcatttca 16047990  T
Q  241 gtgttgggt 249  Q
    |||||||||    
T  16047989 gtgttgggt 16047981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 49 - 249
Target Start/End: Original strand, 16443264 - 16443472
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||| || | |        ||| |||||||||||||||||||||||||||||||    
T  16443264 gcagagacagacaagacattgaagtattgggcatgtagtggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagacg 16443363  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtca 240  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||| |||    
T  16443364 tatcggagccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctgctggggataatgccgtcattgctgggcatttca 16443463  T
Q  241 gtgttgggt 249  Q
    ||| |||||    
T  16443464 gtgctgggt 16443472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 49 - 272
Target Start/End: Original strand, 26508968 - 26509198
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |        ||| |||||||||||||||||||||||||||||||    
T  26508968 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacattacacattcctggaaatcctctttggagataacgtcgttgggagacg 26509067  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtca 240  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| ||||||||  |||||| |  |||||||||| ||| | | |||| ||||| |||    
T  26509068 tatcggaaccatggctgagggcaggtagctaatcaacttgctgggggtagaatcttggaagacccgactggggataacgccgtta-tgctgggcatttca 26509166  T
Q  241 gtgttgggtatgtcatagatatcgcatctgtg 272  Q
    ||| |||||||||  |||||||||||||||||    
T  26509167 gtgctgggtatgttgtagatatcgcatctgtg 26509198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 49 - 249
Target Start/End: Complemental strand, 10848461 - 10848253
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |        ||| |||||||||||||||||||| ||||||||||    
T  10848461 gcagagacagacaagacattggagtattgggcacgtagtggctcgcgctatatcacacattcttggaaatcctctttggagataacgtcattgggagacg 10848362  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtca 240  Q
    |||||||||||||||||||||| ||| |||| || |||||||||||| |||||||| |||||||||||||| ||||||||| |||| ||| ||||| |||    
T  10848361 tatcggaaccatggctgagggcgggttgctacgcgacttgctggggacagaatctcggaagactctgctggagataatgccgtcatcgctgggcatttca 10848262  T
Q  241 gtgttgggt 249  Q
    |||||||||    
T  10848261 gtgttgggt 10848253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 5154939 - 5154759
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||    
T  5154939 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 5154840  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||| ||||||||    
T  5154839 tgtcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgcc 5154759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 49 - 272
Target Start/End: Original strand, 16511708 - 16511939
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||| |||||||||||||||||| || ||||||||| || | |        ||| |||||||||||||| ||||||||||||||||    
T  16511708 gcagagacagacaagacactggagtattgggcacgtaatgactcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 16511807  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtca 240  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||| |||||||| |||||||  ||||| |||    
T  16511808 tatcggaaccatggctgagggcaggtagttatgcaacttgctggggatagaatctcggaagactctactgggaataatgccgtcattgccgggcatttca 16511907  T
Q  241 gtgttgggtatgtcatagatatcgcatctgtg 272  Q
    ||| ||| | | || | ||| |||||||||||    
T  16511908 gtgctggatgtatcgtggatgtcgcatctgtg 16511939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 2161427 - 2161248
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||  ||||||||||||||||    
T  2161427 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagacgacgtcgttgggagacg 2161328  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    | ||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||| ||||| ||||||||    
T  2161327 tgtcggaaccatggctgagggca-gtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgcc 2161248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 48 - 221
Target Start/End: Original strand, 10910208 - 10910389
Alignment:
Q  48 agcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagac 139  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||| || | |        ||| |||||||||||||| |||| ||||||||||    
T  10910208 agcagagacagacaagacactggagtattgggcacgtaatggctcgtgctatattacacattcctggaaatcctctttggagatgacgttgttgggagac 10910307  T
Q  140 gtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||| ||||| ||||||||    
T  10910308 gtatcgggaccatggctgagggcaggtagctatgcaacttgctgaggatagaatctcgggagactctactgggaataatgcc 10910389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 5165240 - 5165060
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||    
T  5165240 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 5165141  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||| |||  |||||||||| |||||||||||||||||||||||||||| |||  | ||||||| || |||||||||||    
T  5165140 tatcgggacctaggctgagggccggtagctatgcaacttgctggggatagagtcttgggagactctactagggataatgcc 5165060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 11418062 - 11418242
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatca--------tagaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| || |        | ||| |||||||||||||| ||||||||||||||||    
T  11418062 gcagagacagacaagacattagagtattgggcacgtagtggctcgtgctatattacgcattcctggaaatcctctttggagatgacgtcgttgggagacg 11418161  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||| |||  |||||||||| ||||||||||||||||||||||||||||||||  | ||||||| ||||| ||||||||    
T  11418162 tatcgggacctaggctgagggccggtagctatgcaacttgctggggatagaatcttgggagactctactgggaataatgcc 11418242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 2780092 - 2779920
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| ||||||||| |||| ||| ||||||||||||||||||||    
T  2780092 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttgaagatgacgccgttgggagacgtatcggaa 2779993  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||| ||||| ||||||||    
T  2779992 ccatggctgagggcaggtaggcatgcaacttgctggggatagaatctcggaagactctactgggaataatgcc 2779920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 22148736 - 22148564
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  22148736 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 22148637  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    || |||||||||||||||||  |||||||| ||||||||||| ||||| ||||||||| ||||| ||||||||    
T  22148636 ccctggctgagggcaggtaggcatgcaactggctggggataggatctcggaagactctactgggaataatgcc 22148564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 22152963 - 22152791
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  22152963 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 22152864  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    || |||||||||||||||||  |||||||| ||||||||||| ||||| ||||||||| ||||| ||||||||    
T  22152863 ccctggctgagggcaggtaggcatgcaactggctggggataggatctcggaagactctactgggaataatgcc 22152791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 22208878 - 22208706
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  22208878 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 22208779  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    || |||||||||||||||||  |||||||| ||||||||||| ||||| ||||||||| ||||| ||||||||    
T  22208778 ccctggctgagggcaggtaggcatgcaactggctggggataggatctcggaagactctactgggaataatgcc 22208706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 57 - 272
Target Start/End: Original strand, 26663179 - 26663401
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  26663179 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 26663278  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctg-ctggggataatgccctcattgctaggcatgtcagtgttgg 247  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||  |||||| ||| ||||||| |||||| |   |||| ||||| |||||| |||    
T  26663279 ccatggctgagggcaggtaggtatgcaacttgctggagatagaatcttggaagac-ctgactggggaaaatgccgt-tgtgctgggcatttcagtgctgg 26663376  T
Q  248 gtatgtcatagatatcgcatctgtg 272  Q
    ||||||  |||| || |||||||||    
T  26663377 gtatgttgtagacattgcatctgtg 26663401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 57 - 272
Target Start/End: Original strand, 26678371 - 26678593
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  26678371 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 26678470  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctg-ctggggataatgccctcattgctaggcatgtcagtgttgg 247  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||  |||||| ||| ||||||| |||||| |   |||| ||||| |||||| |||    
T  26678471 ccatggctgagggcaggtaggtatgcaacttgctggagatagaatcttggaagac-ctgactggggaaaatgccgt-tgtgctgggcatttcagtgctgg 26678568  T
Q  248 gtatgtcatagatatcgcatctgtg 272  Q
    ||||||  |||| || |||||||||    
T  26678569 gtatgttgtagacattgcatctgtg 26678593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 57 - 272
Target Start/End: Original strand, 31083890 - 31084113
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  31083890 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 31083989  T
Q  149 ccatggctgagggcaggtagctatgcaacttgc-tggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtcagtgttgg 247  Q
    |||||||||||||||||||||||  |||||||| ||||||||||||||    ||||||  | ||||| || ||| |   |||| |||||||||| | |||    
T  31083990 ccatggctgagggcaggtagctaaacaacttgcttggggatagaatcttgagagactccaccggggaaaacgccgt-tgtgctgggcatgtcagcgctgg 31084088  T
Q  248 gtatgtcatagatatcgcatctgtg 272  Q
    ||||||| |||||||||||||||||    
T  31084089 gtatgtcgtagatatcgcatctgtg 31084113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 110 - 221
Target Start/End: Complemental strand, 3452038 - 3451927
Alignment:
Q  110 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 209  Q
    |||||||||||||| |||||||||||||||||| |||| ||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||    
T  3452038 tcctctttggagatgacgtcgttgggagacgtaccggagccaaggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctact 3451939  T
Q  210 ggggataatgcc 221  Q
    ||| ||||||||    
T  3451938 gggaataatgcc 3451927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 31130765 - 31130618
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||| ||||    
T  31130765 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtattggaa 31130666  T
Q  149 cca-tggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  31130665 ccaatggctgagggcaggtagctatgcaacttgctggggatagaatct 31130618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 26442113 - 26441967
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||| ||||||| ||||||||||||||||||||||||    
T  26442113 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctatggagatgacgtcgttgggagacgtatcggaa 26442014  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    ||||||| |||||| ||||| ||||||||||||||||||||||||||    
T  26442013 ccatggccgagggccggtaggtatgcaacttgctggggatagaatct 26441967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 45394027 - 45393923
Alignment:
Q  110 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 209  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||| | ||    
T  45394027 tcctctttggagatgacgtcgttgagagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggagatagaatcttggaagactttact 45393928  T
Q  210 gggga 214  Q
    |||||    
T  45393927 gggga 45393923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 26313130 - 26313277
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  26313130 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 26313229  T
Q  149 ccatggctgagggcaggtagctatgcaacttgc-tggggatagaatct 195  Q
    ||||||||||||||||||| |||  |||||||| ||||||||||||||    
T  26313230 ccatggctgagggcaggtaactaaacaacttgcttggggatagaatct 26313277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 4138512 - 4138658
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| ||||||    
T  4138512 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 4138611  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    |||| |||||||||||| || ||||||||||||||| ||||||||||    
T  4138612 ccatagctgagggcaggcaggtatgcaacttgctggagatagaatct 4138658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 4206244 - 4206098
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| |||| |||||||||||||||||||||||| || | |        ||| |||||||||||||| |||||||||||||||||  |||||    
T  4206244 agacaagacattagagtgttgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtgccggaa 4206145  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  4206144 ccatggccgagggcaggtaggtatgcaacttgctggggatagaatct 4206098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 16744787 - 16744933
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| |||||||||||||||||  |||||    
T  16744787 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgacggaa 16744886  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||||||    
T  16744887 ccatagctgagggcaggtagatatgcaacttgctggagatagaatct 16744933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 57 - 221
Target Start/End: Original strand, 39206431 - 39206603
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| |||| |    
T  39206431 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggga 39206530  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||  |||||||||| |||||||||||||||||||| |||||||||||  | ||||||| ||||  ||||||||    
T  39206531 cctaggctgagggccggtagctatgcaacttgctgaggatagaatcttgggagactctactggaaataatgcc 39206603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 45738149 - 45737977
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| |||| |    
T  45738149 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggga 45738050  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||  |||||||||| ||||||||||||| ||||||||||||||||||  | ||||||| ||||  ||||||||    
T  45738049 cctaggctgagggccggtagctatgcaatttgctggggatagaatcttgggagactctactggaaataatgcc 45737977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 24585802 - 24585949
Alignment:
Q  57 agacaagacattg-gagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcgga 147  Q
    ||||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| |||||    
T  24585802 agacaagacatttagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcgga 24585901  T
Q  148 accatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    ||||| ||||| ||||||||| ||||||||||||||| ||||||||||    
T  24585902 accatagctgaaggcaggtagatatgcaacttgctggagatagaatct 24585949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 26596525 - 26596378
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||| ||||| || | |        ||| |||||||||||||| ||||||||||||||||| ||||||    
T  26596525 agacaagacattagagtattgggcacgtagtggctcatgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 26596426  T
Q  149 cca-tggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    ||| | ||||||||||||||| ||||||||||||||| ||||||||||    
T  26596425 ccaatagctgagggcaggtagatatgcaacttgctggagatagaatct 26596378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 57 - 214
Target Start/End: Original strand, 31557671 - 31557837
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  |||||||||||||||||| |||||||||| || | |        ||| ||||||||||||||  |||||||||||||||||||||||    
T  31557671 agacaagacatcagagtattgggcacgtagtagctcgtgctatattacaccttcttggaaatcctctttggagatggcgtcgttgggagacgtatcggaa 31557770  T
Q  149 ccatggctgagggcaggtagctatgcaacttgc-tggggatagaatctcagaagactctgctgggga 214  Q
    |||||||||||||||||||| ||  |||||||| ||||||||||||||  ||||||| | |||||||    
T  31557771 ccatggctgagggcaggtaggtaaacaacttgcttggggatagaatcttggaagactttactgggga 31557837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 11447696 - 11447592
Alignment:
Q  110 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 209  Q
    |||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||| || ||||||||||||||| ||||||||||  ||||||| | ||    
T  11447696 tcctctttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttact 11447597  T
Q  210 gggga 214  Q
    |||||    
T  11447596 gggga 11447592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 26519615 - 26519511
Alignment:
Q  110 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 209  Q
    |||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||| || ||||||||||||||| ||||||||||  ||||||| | ||    
T  26519615 tcctctttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttact 26519516  T
Q  210 gggga 214  Q
    |||||    
T  26519515 gggga 26519511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 57 - 214
Target Start/End: Original strand, 26268353 - 26268517
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| |||||     
T  26268353 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggac 26268452  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctgggga 214  Q
    | | ||||||||||||| || ||||||||||||||| ||||||||||  ||||||| | |||||||    
T  26268453 cta-ggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttactgggga 26268517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 57 - 189
Target Start/End: Original strand, 5140604 - 5140744
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgcta-------catcatagaag-tcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| |||||||||||||||||||||||||||||       |||  | | || |||||| ||||||| ||||| ||||||||||||||||||    
T  5140604 agacaagacattagagtattgggcacgtagtggctcgtgctatgttacacattctcggagatcctctatggagatgacgtcattgggagacgtatcggaa 5140703  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggata 189  Q
    ||||||| |||||| ||||| |||| |||||||||||||||    
T  5140704 ccatggccgagggccggtaggtatgtaacttgctggggata 5140744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 132; Significance: 1e-68; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 49 - 249
Target Start/End: Complemental strand, 15234708 - 15234500
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||||||||||||||||||||    
T  15234708 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagacg 15234609  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtca 240  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||| ||||| | |    
T  15234608 tatcggaaccatgactgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctgctggggataatgccgtcatcgctgggcatttta 15234509  T
Q  241 gtgttgggt 249  Q
    ||| |||||    
T  15234508 gtgctgggt 15234500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 49 - 272
Target Start/End: Original strand, 24585747 - 24585978
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||    
T  24585747 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 24585846  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtca 240  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||| ||||| |||||||| |||||||  ||||| |||    
T  24585847 tatcgggaccatggctgagggcagatagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgccgtcattgccgggcatttca 24585946  T
Q  241 gtgttgggtatgtcatagatatcgcatctgtg 272  Q
    ||| |||||||||  |||||||||||||||||    
T  24585947 gtgctgggtatgttgtagatatcgcatctgtg 24585978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 49 - 249
Target Start/End: Complemental strand, 1907157 - 1906949
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||||||||| ||||||||||    
T  1907157 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagataacgtcattgggagacg 1907058  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtca 240  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||| |||||||| ||||| |||    
T  1907057 tatcggaaccatgactgagggcaggtagctatgcaacttgctggggatagaatctcggaaggctctactggggataatgccgtcattgctgggcatttca 1906958  T
Q  241 gtgttgggt 249  Q
    ||| |||||    
T  1906957 gtgctgggt 1906949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 49 - 249
Target Start/End: Original strand, 15379614 - 15379822
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |        ||| ||||||||||| |||||||||||||||||||    
T  15379614 gcagagacagacaagacattggaatattgggcacgtagtggctcgtgctatatcacacattcttggaaatcctctttggatataacgtcgttgggagacg 15379713  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtca 240  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||| ||| ||||| | |    
T  15379714 tatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctgctggagataatgccgtcatcgctgggcatttta 15379813  T
Q  241 gtgttgggt 249  Q
    |||||||||    
T  15379814 gtgttgggt 15379822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 49 - 245
Target Start/End: Original strand, 15276002 - 15276206
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |        ||| ||||||||||||||||||| |||||||||||    
T  15276002 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatatcacacattcttggaaatcctctttggagataacgttgttgggagacg 15276101  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtca 240  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||| | |||||| || |||| ||||||||| |||    
T  15276102 tatcggaaccatggctgagggcaggtagctatgcgacttgctggggacagaatctcggaagactccgctagagataataccgtcatcgctaggcatttca 15276201  T
Q  241 gtgtt 245  Q
    |||||    
T  15276202 gtgtt 15276206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 14671879 - 14671699
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||    
T  14671879 gcagagacagacaagacactggagtattgggcacgtaatggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 14671780  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || || ||||||||    
T  14671779 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactaggaataatgcc 14671699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 50 - 221
Target Start/End: Complemental strand, 17019917 - 17019738
Alignment:
Q  50 cagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgt 141  Q
    ||||||||||||||||| |||||| ||||||||| |||||||||||||| || | |        ||| |||||||||||||| |||||||||||||||||    
T  17019917 cagagacagacaagacactggagtgttgggcacgcagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgt 17019818  T
Q  142 atcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||| ||||||||    
T  17019817 atcggaaccatggctgagggcaggtagttatgcaacttgctggggatagaatctcggaagactctactgggaataatgcc 17019738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 57 - 221
Target Start/End: Original strand, 14752900 - 14753072
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||| ||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  14752900 agacgagacatcagagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 14752999  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||| ||||||||    
T  14753000 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctactgggaataatgcc 14753072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 6576718 - 6576545
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctcttt-ggagataacgtcgttgggagacgtatcgga 147  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||| |||||| |||||||||||||||||||||||    
T  6576718 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctcttttggagatgacgtcgttgggagacgtatcgga 6576619  T
Q  148 accatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||  ||||||||||||||    
T  6576618 accatggctgagggcaggtaagtatgcaacttgctggggatagaatctcggaagactccactggggataatgcc 6576545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 57 - 221
Target Start/End: Original strand, 36323721 - 36323893
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| || |||||||||||||||||||||||||| || | |        ||| ||||| |||||||| ||||||||||||||||||||||||    
T  36323721 agacaagacattagaatattgggcacgtagtggctcgtgctatattacacattcttggaaatcctccttggagatgacgtcgttgggagacgtatcggaa 36323820  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||| ||||| ||||||||    
T  36323821 ccatggctgagggcaggtaggcatgcaacttgctggggatagaatctcggaagactctactgggaataatgcc 36323893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 57 - 221
Target Start/End: Original strand, 36337930 - 36338102
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| || |||||||||||||||||||||||||| || | |        ||| ||||| |||||||| ||||||||||||||||||||||||    
T  36337930 agacaagacattagaatattgggcacgtagtggctcgtgctatattacacattcttggaaatcctccttggagatgacgtcgttgggagacgtatcggaa 36338029  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||| ||||| ||||||||    
T  36338030 ccatggctgagggcaggtaggcatgcaacttgctggggatagaatctcggaagactctactgggaataatgcc 36338102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 39857496 - 39857324
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| || ||| ||||||| ||||||||||||||||||||||||    
T  39857496 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaattcttctgtggagatgacgtcgttgggagacgtatcggaa 39857397  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||| | ||||||||    
T  39857396 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctactgagaataatgcc 39857324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 54840272 - 54840126
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    ||||||||||||||| |||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| ||||||    
T  54840272 agacaagacattggattattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtttcggaa 54840173  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||    
T  54840172 ccatggctgagggcaggtaggtatgcaacttgctggagatagaatct 54840126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 57 - 272
Target Start/End: Original strand, 20331819 - 20332041
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| ||||||    
T  20331819 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 20331918  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctg-ctggggataatgccctcattgctaggcatgtcagtgttgg 247  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||||||  |||||| ||| ||||||| |||||| |   |||| ||||| |||||| |||    
T  20331919 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagac-ctgactggggaaaatgccgt-tgtgctgggcatttcagtgctgg 20332016  T
Q  248 gtatgtcatagatatcgcatctgtg 272  Q
    ||||||  |||| || |||||||||    
T  20332017 gtatgttgtagacattgcatctgtg 20332041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 24119523 - 24119350
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcataga---------agtcctctttggagataacgtcgttgggagacgtatcgga 147  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | | |         | |||||||||||||| || |||||||||||||||||||     
T  24119523 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggaaaatcctctttggagatgacatcgttgggagacgtatcggg 24119424  T
Q  148 accatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||| ||||||||||  |||| ||||||||||||||||||||||||||| ||||||||| ||||| ||||||||    
T  24119423 accaaggctgagggccagtagatatgcaacttgctggggatagaatctcggaagactctactgggaataatgcc 24119350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 27156710 - 27156856
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| ||||||    
T  27156710 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 27156809  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||||||    
T  27156810 ccatagctgagggcaggtagatatgcaacttgctggagatagaatct 27156856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 31119894 - 31120040
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| ||||||    
T  31119894 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 31119993  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||    
T  31119994 ccatagctgagggcaggtagctatgcatcttgctggggatagaatct 31120040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 40099017 - 40099163
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| ||||||    
T  40099017 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 40099116  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||||||    
T  40099117 ccatagctgagggcaggtagatatgcaacttgctggagatagaatct 40099163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 57 - 272
Target Start/End: Complemental strand, 5012763 - 5012540
Alignment:
Q  57 agacaagacattggagtattggg-cacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcgga 147  Q
    |||||||||||| |||| ||||| ||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| |||||    
T  5012763 agacaagacattagagtgttggggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcgga 5012664  T
Q  148 accatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtcagtgttgg 247  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||    |||| |  ||||||||||  || |   |||| |||||||||| | |||    
T  5012663 accacggctgagggcaggtaggtatgcaacttgctggggatagaatcttgagagacccgactggggataacaccat-tgtgctgggcatgtcagcgctgg 5012565  T
Q  248 gtatgtcatagatatcgcatctgtg 272  Q
    ||||||| |||||||||||||||||    
T  5012564 gtatgtcgtagatatcgcatctgtg 5012540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 5701410 - 5701238
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| |||||||||||||||||||| |||    
T  5701410 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcagaa 5701311  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||| |||||||||||||||| ||||||||||||||| ||||||||||  ||||||| | | ||||| ||||||    
T  5701310 ccaaggctgagggcaggtaggtatgcaacttgctggagatagaatcttggaagactttaccggggacaatgcc 5701238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 57 - 229
Target Start/End: Original strand, 34182341 - 34182521
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||| ||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| |||| |    
T  34182341 agacaagacattagagtattgggcacatagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggga 34182440  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgc 229  Q
    ||  |||||||||| |||||||||||||||||||||||||||| |||  | ||||||| ||||| |||||||| |||||||    
T  34182441 cctaggctgagggccggtagctatgcaacttgctggggatagagtcttgggagactctactgggaataatgccgtcattgc 34182521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 57 - 191
Target Start/End: Original strand, 18794027 - 18794169
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  18794027 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 18794126  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggataga 191  Q
    ||||||| |||||| ||||| |||| |||||||||||||||||    
T  18794127 ccatggccgagggccggtaggtatgtaacttgctggggataga 18794169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 21976585 - 21976439
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||| ||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| ||||||    
T  21976585 agacaagatatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 21976486  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||    
T  21976485 ccatagctgagggcaggtagctatgcatcttgctggggatagaatct 21976439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 110 - 214
Target Start/End: Original strand, 33667246 - 33667350
Alignment:
Q  110 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 209  Q
    |||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||| || ||||||||||||||| ||||||||||  ||||||| | ||    
T  33667246 tcctctttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttact 33667345  T
Q  210 gggga 214  Q
    |||||    
T  33667346 gggga 33667350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 57 - 191
Target Start/End: Complemental strand, 14105425 - 14105283
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||  |||||| ||||||| ||||||||||||||||||||||||    
T  14105425 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaa 14105326  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggataga 191  Q
    ||||||| |||||  ||||| |||| |||||||||||||||||    
T  14105325 ccatggccgagggtcggtaggtatgtaacttgctggggataga 14105283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 30760584 - 30760480
Alignment:
Q  110 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 209  Q
    |||| ||||||||| ||||||||||||||||||||||| ||| ||||||||||||| || ||||||||||||||| ||||||||||  ||||||| | ||    
T  30760584 tcctttttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttact 30760485  T
Q  210 gggga 214  Q
    |||||    
T  30760484 gggga 30760480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 98
Target Start/End: Original strand, 24814685 - 24814726
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgcta 98  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  24814685 agacaagacattagagtattgggcacgtagtggctcgtgcta 24814726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 98
Target Start/End: Original strand, 24813781 - 24813822
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgcta 98  Q
    |||||||||||| ||||||||||||||| |||||||||||||    
T  24813781 agacaagacattagagtattgggcacgtggtggctcgtgcta 24813822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 128; Significance: 3e-66; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 49 - 249
Target Start/End: Original strand, 22074267 - 22074475
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |        ||| ||||||||||| |||||||||||||||||||    
T  22074267 gcagagacagacaagacattggaatattgggcacgtagtggctcgtgctatatcacacattcttggaaatcctctttggatataacgtcgttgggagacg 22074366  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtca 240  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||| ||| ||||| | |    
T  22074367 tatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctgctggagataatgccgtcatcgctgggcatttaa 22074466  T
Q  241 gtgttgggt 249  Q
    |||||||||    
T  22074467 gtgttgggt 22074475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 15774431 - 15774251
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |        ||| |||||||||||||| ||||||||||||||||    
T  15774431 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 15774332  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||| ||||||||    
T  15774331 tatcgggaccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctactgggaataatgcc 15774251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 49 - 272
Target Start/End: Complemental strand, 16260795 - 16260564
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||| || | |        ||| ||||||||||||||||||||||||||||||     
T  16260795 gcagagacagacaagacactggagtattgggcacgtaatggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagact 16260696  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtca 240  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||| |||||||| ||||| |  ||||| |||    
T  16260695 tatcggaaccatgactgagggcaggtagctatgcaacttgctggggatagaatctcggaaggctctactgggaataatgccgtcattaccgggcatttca 16260596  T
Q  241 gtgttgggtatgtcatagatatcgcatctgtg 272  Q
    |||| |||| | || | ||| |||||||||||    
T  16260595 gtgtcgggtgtatcgtggatgtcgcatctgtg 16260564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 49 - 243
Target Start/End: Complemental strand, 19694973 - 19694771
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||| || || | |        ||| |||||||||||||| ||||||||| ||||||    
T  19694973 gcagagacagacaagacactggagtattgggcacgtaatggctcgtgttatattacacattcctggaaatcctctttggagatgacgtcgttgagagacg 19694874  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtca 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||| |||||||  ||||| |||    
T  19694873 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactgggaataatgccgtcattgccgggcatttca 19694774  T
Q  241 gtg 243  Q
    |||    
T  19694773 gtg 19694771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 2130623 - 2130803
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||    
T  2130623 gcagagacagacaagacactggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 2130722  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||    
T  2130723 tatcgggaccatggctgagggcagatagctatgcaacttgctggggatagaatctcggaagactctactgggaataatgcc 2130803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 49 - 272
Target Start/End: Original strand, 19654681 - 19654912
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||| || | |        ||| ||||||||||||||||||||||||||||||     
T  19654681 gcagagacagacaagacactggagtattgggcacgtaatggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagact 19654780  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtca 240  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||| |||||||| ||||| |  ||||| |||    
T  19654781 tatcggaaccatgactgagggcaggtagctatgcaacttgctggggatagaatctcggaaggctctactgggaataatgccgtcattaccgggcatttca 19654880  T
Q  241 gtgttgggtatgtcatagatatcgcatctgtg 272  Q
    |||  |||| | || | ||| |||||||||||    
T  19654881 gtgccgggtgtatcgtggatgtcgcatctgtg 19654912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 49 - 219
Target Start/End: Complemental strand, 14570012 - 14569834
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctaca--------tcatagaagtcctctttggagataacgtcgttgggagacg 140  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||| |        || | ||| |||||||||||||| ||||||||||||||||    
T  14570012 gcagagacagacaagacattggagtattgggcacacagtggctcgtgctatactacacattcttggaaatcctctttggagatgacgtcgttgggagacg 14569913  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatg 219  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||| ||||||    
T  14569912 tatcggaaccatggctgagggcaggtagctatgcaactcgctggggatagaatctcggaagactctactgggaataatg 14569834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 49 - 219
Target Start/End: Complemental strand, 22139771 - 22139593
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| || | |        ||| ||||||||||||||||||||||||||||||     
T  22139771 gcagagacagacaagacactggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagact 22139672  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatg 219  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||| |||||||| ||||||||| ||||||||||||    
T  22139671 tatcggaaccatgactgagggcaggtagctatacaacttgctggggacagaatctcggaagactctactggggataatg 22139593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 49 - 220
Target Start/End: Original strand, 21341525 - 21341705
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||    
T  21341525 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 21341624  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgc-tggggatagaatctcagaagactctgctggggataatgc 220  Q
    | ||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||| ||||| |||||||    
T  21341625 tgtcggaaccatggctgagggcaggtagctatgcaacttgcttgaggatagaatctcggaagactctactgggaataatgc 21341705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 18797566 - 18797386
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||    
T  18797566 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 18797467  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||  | ||||| | ||||| ||||||||    
T  18797466 tatcggaaccatggctgagggcaggtagctatgcaacttgctaaggatagaatcttgggagactttactgggaataatgcc 18797386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 33249220 - 33249040
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||    
T  33249220 gcagagacaaacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 33249121  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||| |||| |||||||||| ||||||||||||||||||||||||||||||||  ||||||||| ||||| ||||||||    
T  33249120 tatcgggaccaaggctgagggccggtagctatgcaacttgctggggatagaatcttggaagactctactgggaataatgcc 33249040  T

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Target: chr8; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 19910522 - 19910702
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||| |||||||||||||||  |||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||    
T  19910522 gcagagacagacaagacactggagtattgggcacacagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 19910621  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||||||| | | ||||| ||||| ||||||||    
T  19910622 tatcgggaccatggctgagggcaggtagctatgcaacttgctgaggatagaatctcgggaaactctactgggaataatgcc 19910702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 18716331 - 18716159
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| ||||||    
T  18716331 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 18716232  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  | ||||||| ||||  ||||||||    
T  18716231 ccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgggagactctactggaaataatgcc 18716159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 27602268 - 27602448
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||| |||||| |||||||||  ||||||||||||| || | |        ||| |||||||||||| | ||||||||||||||||    
T  27602268 gcagagacagacaagacactggagtgttgggcacgcggtggctcgtgctatattacacattcttggaaatcctctttggagctgacgtcgttgggagacg 27602367  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||  | ||||||| ||||| ||||||||    
T  27602368 tatcggaaccatggctgagggcaggtagctatgcaacttgctaaggatagaatcttgggagactctactgggaataatgcc 27602448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 57 - 272
Target Start/End: Original strand, 12086075 - 12086297
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  12086075 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 12086174  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtcagtgttggg 248  Q
    |||||||||||||||||||||||| |||||||||||  || ||||||| |||| || | ||||||| || ||| | | |||| ||||| |||||| ||||    
T  12086175 ccatggctgagggcaggtagctatacaacttgctggaaattgaatctcggaaggctttactggggaaaacgccgtta-tgctgggcatttcagtgctggg 12086273  T
Q  249 tatgtcatagatatcgcatctgtg 272  Q
    || ||  |||| ||||||||||||    
T  12086274 tacgttgtagacatcgcatctgtg 12086297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 57 - 272
Target Start/End: Complemental strand, 29836198 - 29835976
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  29836198 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 29836099  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtcagtgttggg 248  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||  |||||| |  ||||||| || ||| |   |||| ||||| |||||| ||||    
T  29836098 ccatggctgagggcaggtaggtatgcaacttgctggagatagaatcttggaagacccgactggggaaaacgccgt-tgtgctgggcatttcagtgctggg 29836000  T
Q  249 tatgtcatagatatcgcatctgtg 272  Q
    |||||  |||| || |||||||||    
T  29835999 tatgttgtagacattgcatctgtg 29835976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 33265595 - 33265449
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| ||||||||||| || ||||||||||||||||||| ||||    
T  33265595 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaaatgacgtcgttgggagacgtattggaa 33265496  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  33265495 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatct 33265449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 57 - 186
Target Start/End: Complemental strand, 31361404 - 31361267
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  31361404 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 31361305  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctgggg 186  Q
    |||||||||||||||||||| |||||||||||||||||    
T  31361304 ccatggctgagggcaggtaggtatgcaacttgctgggg 31361267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 57 - 272
Target Start/End: Original strand, 28355299 - 28355521
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| ||||||    
T  28355299 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 28355398  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctg-ctggggataatgccctcattgctaggcatgtcagtgttgg 247  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||||||  |||||| ||| ||||||| |||||| |   |||| ||||| |||||| |||    
T  28355399 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagac-ctgactggggaaaatgccgt-tgtgctgggcatttcagtgctgg 28355496  T
Q  248 gtatgtcatagatatcgcatctgtg 272  Q
    ||||||  |||| || |||||||||    
T  28355497 gtatgttgtagacattgcatctgtg 28355521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 57 - 214
Target Start/End: Original strand, 31483218 - 31483383
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| ||||||    
T  31483218 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 31483317  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctgggga 214  Q
    |||| ||||||||||||||| ||||||| ||||||| ||||||||||  ||||||| | |||||||    
T  31483318 ccatagctgagggcaggtagatatgcaatttgctggagatagaatcttggaagactttactgggga 31483383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 44567794 - 44567690
Alignment:
Q  110 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 209  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||  |||||||||  ||||||| | ||    
T  44567794 tcctctttggagatgacgtcgttgggagacgtttcggaaccatggctgaggacaggtagctatgcaacttgctggaaatagaatcttggaagactttact 44567695  T
Q  210 gggga 214  Q
    |||||    
T  44567694 gggga 44567690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 19681270 - 19681166
Alignment:
Q  110 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 209  Q
    |||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||| || ||||||||||||||| ||||||||||  ||||||| | ||    
T  19681270 tcctctttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttact 19681171  T
Q  210 gggga 214  Q
    |||||    
T  19681170 gggga 19681166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 19201730 - 19201877
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| ||||||    
T  19201730 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 19201829  T
Q  149 ccatggctgagggcaggtagctatgcaacttgc-tggggatagaatct 195  Q
    |||  |||||||||||||| |||  |||||||| ||||||||||||||    
T  19201830 ccacagctgagggcaggtaactaaacaacttgcttggggatagaatct 19201877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 57 - 191
Target Start/End: Complemental strand, 9361478 - 9361337
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcataga--------agtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | | |        | |||||||||||||| ||||||||||| |||||||||| |    
T  9361478 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttgaaaatcctctttggagatgacgtcgttgggggacgtatcgg-a 9361380  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggataga 191  Q
    |||| ||||||||| ||||| |||| |||| ||||||||||||    
T  9361379 ccatagctgagggccggtaggtatgtaactggctggggataga 9361337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 15775329 - 15775288
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgcta 98  Q
    |||||||||||| ||||||||||||||| |||||||||||||    
T  15775329 agacaagacattagagtattgggcacgtggtggctcgtgcta 15775288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 128; Significance: 3e-66; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 50 - 249
Target Start/End: Complemental strand, 15368085 - 15367877
Alignment:
Q  50 cagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgt 141  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |        ||| |||||||||||||||||||| |||||||||||    
T  15368085 cagagacagacaagacattggagtattgggcacgtagtggctcgcgctacatcacacattcttggaaatcctctttggagataacgtcattgggagacgt 15367986  T
Q  142 atcggaaccatggctgagggcaggtagc-tatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtca 240  Q
    ||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||| ||||| |||    
T  15367985 atcggaaccatggttgagggcgggtagcatatgcaacttgctggggatagaatctcggaagactctgctggggataatgccgtcatcgctgggcatttca 15367886  T
Q  241 gtgttgggt 249  Q
    |||||||||    
T  15367885 gtgttgggt 15367877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 49 - 249
Target Start/End: Original strand, 16617907 - 16618116
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |        ||| ||||||||||||||| |||||||||||||||    
T  16617907 gcagagacagacaagacattggagtattgggcacgtagtagctcgtgctatatcacacattcttggaaatcctctttggagatatcgtcgttgggagacg 16618006  T
Q  141 tatcggaaccatggctgagggcaggtagc-tatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtc 239  Q
     ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||  |||| ||| ||||| ||    
T  16618007 catcggaaccatggctgagggcgggtagcatatgcaacttgctggggatagaatctcggaagactccgctggggataatgctgtcatcgctgggcatttc 16618106  T
Q  240 agtgttgggt 249  Q
    ||||||||||    
T  16618107 agtgttgggt 16618116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 5658954 - 5658774
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||    
T  5658954 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacaccttcctggaaatcctctttggagatgacgtcgttgggagacg 5658855  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||| ||||||||    
T  5658854 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgcc 5658774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 49 - 229
Target Start/End: Original strand, 15886157 - 15886345
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||| || | |        ||| |||||||||||||||||||||||||||||||    
T  15886157 gcagagacagacaagacactggagtattgggcacgtaatggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagacg 15886256  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgc 229  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||| |||||||| |||||||    
T  15886257 tatcggaaccatggctgagggcaggtagctatgcatcttgctggggatagaatctcggaagactctactgggaataatgccgtcattgc 15886345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 49 - 229
Target Start/End: Complemental strand, 16423027 - 16422839
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    ||||||||||||||| || |||||||||||| |||||||||||||||||| || | |        ||| |||||||||||||||||||||||||||||||    
T  16423027 gcagagacagacaaggcactggagtattgggtacgtagtggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagacg 16422928  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgc 229  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||| |||||||||||||| |||||||    
T  16422927 tatcggaaccatggctgagggcaggtagttatgcaacttgcaggggatagaatctcggaagactctactggggataatgccgtcattgc 16422839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 18058088 - 18057908
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||    
T  18058088 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 18057989  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||| ||||||||    
T  18057988 tatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgcc 18057908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 22381020 - 22381200
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| || |||        ||| |||||||||||||| ||||||||||||||||    
T  22381020 gcagagacagacaggacattggagtattgggcacgtagtggctcgtgctatattatactttcctggaaatcctctttggagatgacgtcgttgggagacg 22381119  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||| ||||||||    
T  22381120 tgtcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgcc 22381200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 29142194 - 29142374
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| ||||||| |||||| ||||||||||||||||    
T  29142194 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctcttcggagatgacgtcgttgggagacg 29142293  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||| ||||||||    
T  29142294 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgcc 29142374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 49 - 243
Target Start/End: Complemental strand, 4690495 - 4690293
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||| |||||| ||||||||| |||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||    
T  4690495 gcagagacagacaagacactggagtgttgggcacgcagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 4690396  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtca 240  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||| |||||||| |||||||| ||||| |||    
T  4690395 tatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgccgtcattgctgggcatttca 4690296  T
Q  241 gtg 243  Q
    |||    
T  4690295 gtg 4690293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 49 - 249
Target Start/End: Complemental strand, 22041250 - 22041041
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |        ||| ||||||||||||||| |||||||||||||||    
T  22041250 gcagagacagacaagacattggagtattgggcacgtagtagctcgtgctatatcacacattcttggaaatcctctttggagatatcgtcgttgggagacg 22041151  T
Q  141 tatcggaaccatggctgagggcaggtagc-tatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtc 239  Q
     ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||| ||||| |||||| |  |||| ||| ||||| ||    
T  22041150 catcggaaccatggctgagggcgggtagcatatgcaacttgctggggatagaatctcggaagactccgctggagataatacagtcatcgctgggcatttc 22041051  T
Q  240 agtgttgggt 249  Q
    ||||||||||    
T  22041050 agtgttgggt 22041041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 4728446 - 4728266
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||    
T  4728446 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 4728347  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||| ||||| ||||||||    
T  4728346 tgtcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgggagactctactgggaataatgcc 4728266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 6208715 - 6208535
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||    
T  6208715 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 6208616  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||| ||||| ||||||||    
T  6208615 tgtcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgggagactctactgggaataatgcc 6208535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 53 - 229
Target Start/End: Complemental strand, 19701233 - 19701049
Alignment:
Q  53 agacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| || ||||||||||||||| | ||||||||||||||    
T  19701233 agacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcttctttggagataacgccattgggagacgtatc 19701134  T
Q  145 ggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgc 229  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||    
T  19701133 ggaaccatgactgagggcaggtagctatacaacttgctggggatagaatctcggaagactctactggggataatgccgtcattgc 19701049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 57 - 221
Target Start/End: Original strand, 11103809 - 11103981
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  11103809 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 11103908  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||| ||||||||    
T  11103909 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctactgggaataatgcc 11103981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 49 - 219
Target Start/End: Original strand, 8282900 - 8283078
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||| |||||| ||||||||| |||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||    
T  8282900 gcagagacagacaagacactggagtgttgggcacgcagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 8282999  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatg 219  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||    
T  8283000 tatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactgggtataatg 8283078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 51 - 221
Target Start/End: Original strand, 15734558 - 15734736
Alignment:
Q  51 agagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgta 142  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||    
T  15734558 agagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgta 15734657  T
Q  143 tcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||  ||||||||    
T  15734658 tcgggaccatggttgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactggaaataatgcc 15734736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 57 - 221
Target Start/End: Original strand, 31029691 - 31029863
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  31029691 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 31029790  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||    
T  31029791 ccacggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactgggaataatgcc 31029863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 49 - 219
Target Start/End: Complemental strand, 18337444 - 18337266
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| || |||        ||| |||||||||||||| ||||||||||||||||    
T  18337444 gcagagacagacaggacattggagtattgggcacgtagtggctcgtgctatattatactttcctggaaatcctctttggagatgacgtcgttgggagacg 18337345  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatg 219  Q
    | |||||||| |||||||||||||||||||| |||||||||||||||||||||||  | ||||||| ||||| ||||||    
T  18337344 tgtcggaaccctggctgagggcaggtagctacgcaacttgctggggatagaatcttgggagactctactgggaataatg 18337266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 4790071 - 4790251
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| || | |        ||| ||||||| |||||| ||||||||||||||||    
T  4790071 gcagagacagacaagacattggagtattgggcacgtaatggctcgtgctatattacacattcctggaaatcctcttcggagatgacgtcgttgggagacg 4790170  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||  | ||||||| ||||| ||||||||    
T  4790171 tatcggaaccatggctgagggcaggtagctatgcaacttgctaaggatagaatcttgggagactctactgggaataatgcc 4790251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 5473801 - 5473629
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  5473801 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 5473702  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||| ||||| ||||||||    
T  5473701 ccatggctgagggcaggtaggtatgcaactcgctggggatagaatctcggaagactctactgggaataatgcc 5473629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 57 - 221
Target Start/End: Original strand, 18285804 - 18285976
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||| ||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  18285804 agacgagacatcagagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 18285903  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||| ||||||||    
T  18285904 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctactgggaataatgcc 18285976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 57 - 221
Target Start/End: Original strand, 18301105 - 18301277
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||| ||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  18301105 agacgagacatcagagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 18301204  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||| ||||||||    
T  18301205 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctactgggaataatgcc 18301277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 35887580 - 35887400
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcataga--------agtcctctttggagataacgtcgttgggagacg 140  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| || | | |        | |||||||||||||| ||||||||||||||||    
T  35887580 gcagagacagacaagacattgaagtattgggcacgtagtggctcgtgctatattacacattcctgaaaatcctctttggagatgacgtcgttgggagacg 35887481  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||| |||  | ||||||| ||||| ||||||||    
T  35887480 tgtcggaaccatggctgagggcaggtagctatgcaacttgctggggatagagtcttgggagactctactgggaataatgcc 35887400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 4630593 - 4630421
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgcta-------cat-catagaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  |||||||||||||||||||||||||||||       ||| | | ||| |||||||||| ||| ||||||||||||||||| ||||||    
T  4630593 agacaagacatcagagtattgggcacgtagtggctcgtgctatgttacacattcttggaaatcctctttggtgatgacgtcgttgggagacgtgtcggaa 4630494  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||    
T  4630493 ccatggctgagggcatgtagctatgcaacttgctggggatagaatctcggaagactctactgggaataatgcc 4630421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 57 - 221
Target Start/End: Original strand, 4340124 - 4340296
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| |||||||||||||||||||||||     
T  4340124 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggag 4340223  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||| |||||||||||||||| ||||||||||||||||||||||||||  | ||||||| ||||||||||||||    
T  4340224 ccaaggctgagggcaggtaggtatgcaacttgctggggatagaatcttgggagactctactggggataatgcc 4340296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 57 - 272
Target Start/End: Complemental strand, 24335010 - 24334788
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||| ||| ||||||||||||||||||||||||    
T  24335010 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggggatgacgtcgttgggagacgtatcggaa 24334911  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtcagtgttggg 248  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||  |||||| |  ||||||| || ||| |   |||| ||||| |||||| ||||    
T  24334910 ccatggctgagggcaggtagctatgcatcttgctggggatagaatcttggaagaccccactggggaaaacgccgt-tgtgctgggcatttcagtgctggg 24334812  T
Q  249 tatgtcatagatatcgcatctgtg 272  Q
    |||||  |||| || |||||||||    
T  24334811 tatgttgtagacattgcatctgtg 24334788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 32445964 - 32445792
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgcta-------cat-catagaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  |||||||||||||||||||||||||||||       ||| | | ||| |||||||||| ||| ||||||||||||||||| ||||||    
T  32445964 agacaagacatcagagtattgggcacgtagtggctcgtgctatgttacacattcttggaaatcctctttggtgatgacgtcgttgggagacgtgtcggaa 32445865  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  | ||||||| ||||| ||||||||    
T  32445864 ccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgggagactctactgggaataatgcc 32445792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 5020545 - 5020399
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  5020545 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 5020446  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||    
T  5020445 ccatagctgagggcaggtagatatgcaacttgctggggatagaatct 5020399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 4423730 - 4423558
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||| ||||    
T  4423730 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtattggaa 4423631  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    ||||| | ||||||||||||||    
T  4423630 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatcttgagagactttactggggataatgcc 4423558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 57 - 204
Target Start/End: Complemental strand, 10649904 - 10649749
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| ||||||    
T  10649904 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggaa 10649805  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagact 204  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||  |||||||    
T  10649804 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatcttggaagact 10649749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 28109388 - 28109534
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  28109388 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 28109487  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||    
T  28109488 ccatggctgagggcaggtagctaaacaacttgctggagatagaatct 28109534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 57 - 214
Target Start/End: Original strand, 6536168 - 6536333
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  || |||||||||||||||||||||||||| || | |        ||| ||||||||| |||| ||||||||||||||||||||||||    
T  6536168 agacaagacatcagaatattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttgaagatgacgtcgttgggagacgtatcggaa 6536267  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctgggga 214  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||  ||||||| | |||||||    
T  6536268 ccatggctgagggcaggtagctatgcaacttgctggagatagaatcttggaagactttactgggga 6536333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 121 - 221
Target Start/End: Complemental strand, 7079968 - 7079868
Alignment:
Q  121 gataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgc 220  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||    
T  7079968 gataacgtcgttgggagacgtgtcggaaccaaggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactgggaataatgc 7079869  T
Q  221 c 221  Q
    |    
T  7079868 c 7079868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 18232026 - 18231880
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| ||||||    
T  18232026 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 18231927  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||    
T  18231926 ccatagctgagggcaggtagctatgcatcttgctggggatagaatct 18231880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 22864289 - 22864435
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    ||||||||| |  ||||||||||||||||||||||||||||| || | |        ||| ||||||||| |||| ||||||||||||||||||||||||    
T  22864289 agacaagacgtcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttgaagatgacgtcgttgggagacgtatcggaa 22864388  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  22864389 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatct 22864435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 22879348 - 22879494
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    ||||||||| |  ||||||||||||||||||||||||||||| || | |        ||| ||||||||| |||| ||||||||||||||||||||||||    
T  22879348 agacaagacgtcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttgaagatgacgtcgttgggagacgtatcggaa 22879447  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  22879448 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatct 22879494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 28346005 - 28345859
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| ||||||    
T  28346005 agacaagacattagagtattgggcacgtagtggctcgtgctatattacaccttcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 28345906  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||||||    
T  28345905 ccatagctgagggcaggtagatatgcaacttgctggagatagaatct 28345859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 59 - 195
Target Start/End: Original strand, 17978378 - 17978522
Alignment:
Q  59 acaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaacc 150  Q
    |||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| ||||||||    
T  17978378 acaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaacc 17978477  T
Q  151 atggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    || |||||||||||||||||||||| |||||||||||||||||||    
T  17978478 atagctgagggcaggtagctatgcatcttgctggggatagaatct 17978522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 60 - 195
Target Start/End: Complemental strand, 5717886 - 5717743
Alignment:
Q  60 caagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaacca 151  Q
    ||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| |||||||||    
T  5717886 caagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaacca 5717787  T
Q  152 tggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    | ||||||||||||||| ||||||||||||||| ||||||||||    
T  5717786 tagctgagggcaggtagatatgcaacttgctggagatagaatct 5717743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 60 - 195
Target Start/End: Complemental strand, 5728796 - 5728653
Alignment:
Q  60 caagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaacca 151  Q
    ||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| |||||||||    
T  5728796 caagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaacca 5728697  T
Q  152 tggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    | ||||||||||||||| ||||||||||||||| ||||||||||    
T  5728696 tagctgagggcaggtagatatgcaacttgctggagatagaatct 5728653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 60 - 195
Target Start/End: Original strand, 5763572 - 5763715
Alignment:
Q  60 caagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaacca 151  Q
    ||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| |||||||||    
T  5763572 caagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaacca 5763671  T
Q  152 tggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    | ||||||||||||||| ||||||||||||||| ||||||||||    
T  5763672 tagctgagggcaggtagatatgcaacttgctggagatagaatct 5763715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 57 - 272
Target Start/End: Original strand, 29658392 - 29658614
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgcta-------cat-catagaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| |||||||||||||||||||||||||||||       ||| | | ||| |||||||||||||| ||||||||||||||||| | ||||    
T  29658392 agacaagacattagagtattgggcacgtagtggctcgtgctatgttacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgttggaa 29658491  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctg-ctggggataatgccctcattgctaggcatgtcagtgttgg 247  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||||||  |||||| ||| ||||||| |||||| |   |||| ||||| |||||| |||    
T  29658492 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagac-ctgactggggaaaatgccgt-tgtgctgggcatttcagtgctgg 29658589  T
Q  248 gtatgtcatagatatcgcatctgtg 272  Q
    ||||||  |||| || |||||||||    
T  29658590 gtatgttgtagacattgcatctgtg 29658614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 5602738 - 5602884
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| ||||||    
T  5602738 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 5602837  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||||||    
T  5602838 ccatagctgagggcaggtagatatgcaacttgctggagatagaatct 5602884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 20072847 - 20072675
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| |||| |    
T  20072847 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggga 20072748  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||  |||||||||| ||||||||||||||||||||||||||||||||  | ||||||| ||||  ||||||||    
T  20072747 cctaggctgagggccggtagctatgcaacttgctggggatagaatcttgggagactctactggaaataatgcc 20072675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 48472744 - 48472572
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| |||| |    
T  48472744 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggga 48472645  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||  |||||||||| ||||||||||||||||||||||||||||||||  | ||||||| ||||  ||||||||    
T  48472644 cctaggctgagggccggtagctatgcaacttgctggggatagaatcttgggagactctactggaaataatgcc 48472572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 5589781 - 5589927
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||| ||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| ||||||    
T  5589781 agacaagacattagagtattgggcacgtagtgactcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 5589880  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    |||| ||||||||||||||| ||||||||||||| | ||||||||||    
T  5589881 ccatagctgagggcaggtaggtatgcaacttgctagagatagaatct 5589927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 16404217 - 16404363
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||| ||||||| ||||||||||| |||||||||||     
T  16404217 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctatggagatgacgtcgttgggggacgtatcggag 16404316  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    ||| |||||||||||||||| ||||||||||||||||||||||||||    
T  16404317 ccaaggctgagggcaggtaggtatgcaacttgctggggatagaatct 16404363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 20570281 - 20570427
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||| ||||||| ||||||||||||||||||||||||    
T  20570281 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctatggagatgacgtcgttgggagacgtatcggaa 20570380  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    ||||||| |||| | ||||| |||| |||||||||||||||||||||    
T  20570381 ccatggccgaggaccggtaggtatgtaacttgctggggatagaatct 20570427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 31957881 - 31958027
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| |||| |||||||||||| ||||||    
T  31957881 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgttgttgggagacgtgtcggaa 31957980  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||||||    
T  31957981 ccatagctgagggcaggtagatatgcaacttgctggagatagaatct 31958027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 57 - 214
Target Start/End: Complemental strand, 47030290 - 47030124
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  || |||||||||||||||||||||||||| || | |        ||| ||||||||| |||| |||||||||||||||| |||||||    
T  47030290 agacaagacatcagaatattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttgaagatgacgtcgttgggagacgcatcggaa 47030191  T
Q  149 ccatggctgagggcaggtagctatgcaac-ttgctggggatagaatctcagaagactctgctgggga 214  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||  ||||||||  |||||||    
T  47030190 ccatggctgagggcaggtagctatgcaactttgctggagatagaatcttggaagactccactgggga 47030124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 17970305 - 17970452
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||| ||| ||||    
T  17970305 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacatattggaa 17970404  T
Q  149 ccatggctgagggcaggtagctatgcaacttgc-tggggatagaatct 195  Q
    ||||||||||||||||||| |||  |||||||| ||||||||||||||    
T  17970405 ccatggctgagggcaggtaactaaacaacttgcttggggatagaatct 17970452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 57 - 191
Target Start/End: Complemental strand, 18249552 - 18249410
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||| ||||||| ||||||||||| ||||||||||||    
T  18249552 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctatggagatgacgtcgttgggggacgtatcggaa 18249453  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggataga 191  Q
    ||||||| |||||| ||||| |||| |||||||||||||||||    
T  18249452 ccatggccgagggccggtaggtatgtaacttgctggggataga 18249410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 57 - 191
Target Start/End: Complemental strand, 21681554 - 21681412
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||  |||||| ||||||| ||||||||||||||||||||||||    
T  21681554 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaa 21681455  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggataga 191  Q
    ||||||| |||||| ||||| |||| |||||||||||||||||    
T  21681454 ccatggccgagggccggtaggtatgtaacttgctggggataga 21681412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 32297465 - 32297319
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||  |||||| ||||||| ||||||||||||||||||||||||    
T  32297465 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaa 32297366  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    ||||||| |||||| ||||| ||||||||| ||||| ||||||||||    
T  32297365 ccatggccgagggccggtaggtatgcaactcgctggagatagaatct 32297319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 51788795 - 51788691
Alignment:
Q  110 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 209  Q
    |||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||| || ||||||||||||||| ||||||||||  ||||||| | ||    
T  51788795 tcctctttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttact 51788696  T
Q  210 gggga 214  Q
    |||||    
T  51788695 gggga 51788691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 28028105 - 28027959
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||| |||||| ||||||||||||||||||| | |        ||| ||||||| |||||| ||||||||||||||||| |||| |    
T  28028105 agacaagacattagagtaatgggcaagtagtggctcgtgctacattacacattcttggaaatcctcttcggagatgacgtcgttgggagacgtgtcggga 28028006  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    ||  |||||||||| ||||| ||||||||||||||||||||||||||    
T  28028005 cctaggctgagggccggtaggtatgcaacttgctggggatagaatct 28027959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 57 - 191
Target Start/End: Complemental strand, 10402986 - 10402844
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgcta-------catcatagaag-tcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| |||||||||||||||||||||||||||||       |||  | | || |||||| ||||||| ||||||||||||||||||||||||    
T  10402986 agacaagacattagagtattgggcacgtagtggctcgtgctatgttacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaa 10402887  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggataga 191  Q
    ||||||| | |||| ||||| |||| |||||||||||||||||    
T  10402886 ccatggccgggggccggtaggtatgtaacttgctggggataga 10402844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 110 - 191
Target Start/End: Complemental strand, 8218398 - 8218317
Alignment:
Q  110 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggataga 191  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||| |||||| ||||| |||| |||||||||| ||||||    
T  8218398 tcctctatggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggtatgtaacttgctggagataga 8218317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 7080063 - 7080022
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgcta 98  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  7080063 agacaagacattagagtattgggcacgtagtggctcgtgcta 7080022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 16599447 - 16599406
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgcta 98  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  16599447 agacaagacattagagtattgggcacgtagtggctcgtgcta 16599406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 124; Significance: 8e-64; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 52 - 249
Target Start/End: Complemental strand, 28169 - 27966
Alignment:
Q  52 gagacagacaagacattggagtattgggcacgtagtggctcgtgcta-----cat-catagaagtcctctttggagataacgtcgttgggagacgtatcg 145  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||     ||| | | ||| ||||||||||||||||||||||||||||||||||||    
T  28169 gagacagacaagacattggagtattgggcacgtagtggctcgttatatcacacattcttggaaatcctctttggagataacgtcgttgggagacgtatcg 28070  T
Q  146 gaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtcagtgtt 245  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||| ||||||||||||||| |||| ||| ||||| ||||||||    
T  28069 gaaccatggctgagggcaggtagctatataacttgctggggatagaatctcggaagactccgctggggataatgccgtcatcgctgggcatttcagtgtt 27970  T
Q  246 gggt 249  Q
    ||||    
T  27969 gggt 27966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 124; Significance: 8e-64; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 49 - 249
Target Start/End: Complemental strand, 22895292 - 22895084
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||||||||||||||||||||    
T  22895292 gcagagacagacaagtcattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagacg 22895193  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtca 240  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||| |||||| | ||||| |||    
T  22895192 tatcggaaccatggctgagggcagatagctatgcaacttgctggggatagaatctcggaagactctactggggatgatgccatcattgttgggcatttca 22895093  T
Q  241 gtgttgggt 249  Q
    ||| |||||    
T  22895092 gtgctgggt 22895084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 49 - 243
Target Start/End: Complemental strand, 23898761 - 23898558
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| || | |        ||| |||||||||||||||||||||||||||||||    
T  23898761 gcagagacagacaagacattggagtattgggcacgtaatggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagacg 23898662  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgc-tggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtc 239  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||| |||||||  ||||| ||    
T  23898661 tatcggaaccatggctgagggcaggtagctatgcaacttgcttggggatagaatctcggaagactctactggggataatgccgtcattgccgggcatttc 23898562  T
Q  240 agtg 243  Q
    ||||    
T  23898561 agtg 23898558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 23727102 - 23726922
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||    
T  23727102 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 23727003  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||| ||||||||    
T  23727002 tatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgcc 23726922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 22992417 - 22992594
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||    
T  22992417 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 22992516  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataat 218  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||| |||||    
T  22992517 tgtcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataat 22992594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 24609110 - 24608930
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||| || | |        ||| |||||||||||||| ||||||||| ||||||    
T  24609110 gcagagacagacaagacactggagtattgggcacgtaatggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgagagacg 24609011  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||| ||||||||    
T  24609010 tatcggaaccatggctgagggcaggtagttatgcaacttgctggggatagaatctcggaagactctactgggaataatgcc 24608930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 24976709 - 24976529
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||| |||||| ||||||||| |||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||    
T  24976709 gcagagacagacaagacactggagtgttgggcacgcagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 24976610  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||| ||||||||    
T  24976609 tatcggaaccatggctgagggcaggtagttatgcaacttgctggggatagaatctcggaagactctactgggaataatgcc 24976529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 50 - 219
Target Start/End: Complemental strand, 25207173 - 25206996
Alignment:
Q  50 cagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcataga--------agtcctctttggagataacgtcgttgggagacgt 141  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||| | | |        | |||||||||||||||||||||| |||||||||    
T  25207173 cagagatagtcaagacattggagtattgggcacgtagtggctcgtgctacattacacattcctgggaatcctctttggagataacgtcgtcgggagacgt 25207074  T
Q  142 atcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatg 219  Q
    ||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||    
T  25207073 atcagaaccagggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactgaggataatg 25206996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 50 - 219
Target Start/End: Complemental strand, 25271329 - 25271152
Alignment:
Q  50 cagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcataga--------agtcctctttggagataacgtcgttgggagacgt 141  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||| | | |        | |||||||||||||||||||||| |||||||||    
T  25271329 cagagatagtcaagacattggagtattgggcacgtagtggctcgtgctacattacacattcctgggaatcctctttggagataacgtcgtcgggagacgt 25271230  T
Q  142 atcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatg 219  Q
    ||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||    
T  25271229 atcagaaccagggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactgaggataatg 25271152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 57 - 221
Target Start/End: Original strand, 9544012 - 9544184
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  9544012 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 9544111  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||| ||||| ||||||||    
T  9544112 ccatggctgagggcaggtaggtatgcaactcgctggggatagaatctcggaagactctactgggaataatgcc 9544184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 57 - 221
Target Start/End: Original strand, 37351948 - 37352120
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  37351948 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 37352047  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||   ||||| | ||||||||||||||    
T  37352048 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgagagactttactggggataatgcc 37352120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 57 - 217
Target Start/End: Complemental strand, 6881170 - 6881002
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  6881170 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 6881071  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataa 217  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||| ||||    
T  6881070 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctactgggaataa 6881002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 50 - 220
Target Start/End: Complemental strand, 23632834 - 23632656
Alignment:
Q  50 cagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgt 141  Q
    ||||||||||||||||| |||||| |||||||||  ||||||||||||| || | |        ||| |||||||||||||| |||||||||||||||||    
T  23632834 cagagacagacaagacactggagtgttgggcacgcggtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgt 23632735  T
Q  142 atcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgc 220  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||    
T  23632734 atcgggaccatggctgagggcagatagctatgcaacttgctggggatagaatctcggaagactctactgggaataatgc 23632656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 52 - 221
Target Start/End: Complemental strand, 30941492 - 30941315
Alignment:
Q  52 gagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtat 143  Q
    ||||||||||||||| |||||||||||||||  |||||||||||||| || | |        ||| |||||||||||||| |||||||||||||||||||    
T  30941492 gagacagacaagacactggagtattgggcacacagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtat 30941393  T
Q  144 cggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||| |||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||| ||||| ||||||||    
T  30941392 cgggaccatggctgagggcaggtagctatgcaacttgctgaggatagaatctcgggagactctactgggaataatgcc 30941315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 57 - 214
Target Start/End: Original strand, 28953079 - 28953244
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacat--catag------aagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||||||||||||||||||||||||||||||||| ||  ||||       || |||||||||||||| |||||||||||||||||||||| |    
T  28953079 agacaagacattggagtattgggcacgtagtggctcgtgctatattacatattcttgaaaatcctctttggagatgacgtcgttgggagacgtatcggga 28953178  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctgggga 214  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| | |||||||    
T  28953179 ccatggctgagggcaggtagctatgcatcttgctggggacagaatctcggaagactttactgggga 28953244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 33299401 - 33299221
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||    
T  33299401 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 33299302  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||| |||  ||| |||||| |||||||||||||||||||||||||||||| || | ||||||| ||||| ||||||||    
T  33299301 tatcgggacctaggcggagggccggtagctatgcaacttgctggggatagaatatcgggagactctactgggaataatgcc 33299221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 33784347 - 33784167
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatca--------tagaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || |        | ||| |||||||||||||| ||||||||||||||||    
T  33784347 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacgcattcctggaaatcctctttggagatgacgtcgttgggagacg 33784248  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||| |||   | ||||||| ||||||||||||||||||||||||||||||||| | ||||||| ||||| ||||||||    
T  33784247 tatcgggacctaagttgagggccggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgcc 33784167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 57 - 219
Target Start/End: Original strand, 18121717 - 18121888
Alignment:
Q  57 agacaagacattg-gagtattgggcacgtagtggctcgtgctacatca--------tagaagtcctctttggagataacgtcgttgggagacgtatcgga 147  Q
    ||||||||||||  ||||||||||||||||||||||||||||| ||||        | ||| |||||||||||||| ||||||||||||||||| |||||    
T  18121717 agacaagacatttagagtattgggcacgtagtggctcgtgctatatcacgcattcctggaaatcctctttggagatgacgtcgttgggagacgtgtcgga 18121816  T
Q  148 accatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatg 219  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||| ||||||    
T  18121817 accaaggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatg 18121888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 49 - 219
Target Start/End: Complemental strand, 11556219 - 11556041
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatca--------tagaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || |        | ||| |||||||||||||| ||||||||||||||||    
T  11556219 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacgcattcctggaaatcctctttggagatgacgtcgttgggagacg 11556120  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatg 219  Q
    |||||| |||  |||||||||| |||||||||||||||||||||||||||| |||  | ||||||| ||||| ||||||    
T  11556119 tatcgggacctaggctgagggccggtagctatgcaacttgctggggatagagtcttgggagactctactgggaataatg 11556041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 57 - 221
Target Start/End: Original strand, 15652045 - 15652217
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| | ||||||||||||||| ||| ||    
T  15652045 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgatgtcgttgggagacgtgtcgaaa 15652144  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||| ||||||||    
T  15652145 ccaaggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgcc 15652217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 15752142 - 15752288
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||| ||| ||||||||||||||||||||||||    
T  15752142 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggggatgacgtcgttgggagacgtatcggaa 15752241  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  15752242 ccatggctgagggcaggtagctatgcatcttgctggggatagaatct 15752288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 49 - 189
Target Start/End: Original strand, 13180093 - 13180241
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||    
T  13180093 gcagagacagacaagacactggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 13180192  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggata 189  Q
    |||||| ||||||||||||||||||||| ||||||||| ||||||||||    
T  13180193 tatcgggaccatggctgagggcaggtaggtatgcaactcgctggggata 13180241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 59 - 195
Target Start/End: Original strand, 37745635 - 37745779
Alignment:
Q  59 acaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaacc 150  Q
    |||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||||    
T  37745635 acaagacatcagagtattgggcacgtagtggctcgtgctatattacaccttcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaacc 37745734  T
Q  151 atggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  37745735 atggctgagggcaggtagctatgcaactcgctggggatagaatct 37745779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 41681564 - 41681390
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacat----cat------agaagtcctctttggagataacgtcgttgggagacgtatcgg 146  Q
    ||||||| |||| ||||||||||||||||||||||||||||| ||    |||      | || |||||||||||||| ||||||||||||||||| ||||    
T  41681564 agacaagtcattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaaaatcctctttggagatgacgtcgttgggagacgtgtcgg 41681465  T
Q  147 aaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||| | ||||||||    
T  41681464 aaccatgactgagggcaggtaactatgcaacttgctggggatagaatctcggaagactctactgagaataatgcc 41681390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 30036303 - 30036157
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||| ||| ||||||||||||||||||||||||    
T  30036303 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggggatgacgtcgttgggagacgtatcggaa 30036204  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  30036203 ccatggctgagggcaggtagctatgcatcttgctggggatagaatct 30036157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 31438314 - 31438142
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||| ||||    
T  31438314 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtattggaa 31438215  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||    ||||| | ||||||||||||||    
T  31438214 ccatggctgagggcaggtaagtatgcaacttgctggggatagaatcttgagagactttactggggataatgcc 31438142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 57 - 272
Target Start/End: Original strand, 40466833 - 40467055
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| ||||||    
T  40466833 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 40466932  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctg-ctggggataatgccctcattgctaggcatgtcagtgttgg 247  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||||||  |||||| ||| ||||||| |||||| |   |||| ||||| |||||| |||    
T  40466933 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagac-ctgactggggaaaatgccgt-tgtgctgggcatttcagtgctgg 40467030  T
Q  248 gtatgtcatagatatcgcatctgtg 272  Q
    ||||||  |||| || |||||||||    
T  40467031 gtatgttgtagacattgcatctgtg 40467055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 57 - 191
Target Start/End: Complemental strand, 43085124 - 43084989
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacat-catagaagtcctctttggagataacgtcgttgggagacgtatcggaaccatggc 155  Q
    |||||||||||| |||||||||||||||| |||||||||||| || | | ||| |||||| ||||||| |||||||||||||||||||||||||||||||    
T  43085124 agacaagacattagagtattgggcacgtaatggctcgtgctatattcttggaaatcctctctggagatgacgtcgttgggagacgtatcggaaccatggc 43085025  T
Q  156 tgagggcaggtagctatgcaacttgctggggataga 191  Q
     |||||| ||||| |||| |||||||||||||||||    
T  43085024 cgagggccggtaggtatgtaacttgctggggataga 43084989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 57 - 204
Target Start/End: Original strand, 8658777 - 8658932
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  |||| |||||||||||||||||||||||| || | |        ||| |||||||||||||| |||||| |||||||||||||||||    
T  8658777 agacaagacatcagagtgttgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgctgggagacgtatcggaa 8658876  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagact 204  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||| |||||||    
T  8658877 ccatggctgagggcaggtagctatgcaacttgctggaaatagaatctcggaagact 8658932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 33523261 - 33523115
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| ||||||    
T  33523261 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 33523162  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||    
T  33523161 ccatagctgagggcaggtagctatgcatcttgctggggatagaatct 33523115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 57 - 214
Target Start/End: Complemental strand, 12139039 - 12138874
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| |||||||||||||||||||||||     
T  12139039 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggag 12138940  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctgggga 214  Q
    ||| ||||||||||||| || ||||||||||||||| ||||||||||  ||||||| | |||||||    
T  12138939 ccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttactgggga 12138874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 18494052 - 18494198
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgcta-------cat-catagaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||| |||||||||||||||       ||| | | ||| |||||||||||||| ||||||||||||||||||||||||    
T  18494052 agacaagacatcagagtattgggcacatagtggctcgtgctatgttacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 18494151  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||    
T  18494152 ccatggctgagggccagtagctatgcaacttgctggggatagaatct 18494198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 2517922 - 2517750
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| |||||||||||||||||| ||||     
T  2517922 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtaccggag 2517823  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||| ||||||||||||| || ||||||||||||||| ||||||||||   |||||| | ||||||||||||||    
T  2517822 ccacggctgagggcaggcaggtatgcaacttgctggagatagaatcttgaaagactttactggggataatgcc 2517750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 24730826 - 24730654
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||| ||||||| || | |        ||| |||||||||||||| ||||||||||||||||||| ||||    
T  24730826 agacaagacatcagagtattgggcacgtagtggcccgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtattggaa 24730727  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||    ||||| | ||||||||||||||    
T  24730726 ccatggctgagggcaggtaggtatgccacttgctggggatagaatcttgagagactttactggggataatgcc 24730654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 9324341 - 9324194
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  9324341 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 9324242  T
Q  149 ccatggctgagggcaggtagctatgcaacttgc-tggggatagaatct 195  Q
    ||||||||||||||||||| |||  |||||||| ||||||||||||||    
T  9324241 ccatggctgagggcaggtaactaaacaacttgcttggggatagaatct 9324194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 26487251 - 26487104
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  26487251 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 26487152  T
Q  149 ccatggctgagggcaggtagctatgcaacttgc-tggggatagaatct 195  Q
    ||||||||||||||||||| |||  |||||||| ||||||||||||||    
T  26487151 ccatggctgagggcaggtaactaaacaacttgcttggggatagaatct 26487104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 110 - 272
Target Start/End: Complemental strand, 37761790 - 37761629
Alignment:
Q  110 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 209  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||  ||||||| | ||    
T  37761790 tcctctttgaagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctgtgcaacttgctggagatagaatcttggaagactttact 37761691  T
Q  210 ggggataatgccctcattgctaggcatgtcagtgttgggtatgtcatagatatcgcatctgtg 272  Q
    ||||| || ||| |   |||| ||||| |||||| |||||||||  |||| || |||||||||    
T  37761690 ggggaaaacgccgt-tgtgctgggcatttcagtgctgggtatgttgtagacattgcatctgtg 37761629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 30175345 - 30175199
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| || ||||||||||| ||||||||||||||||| ||||||    
T  30175345 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcttctttggagatgacgtcgttgggagacgtgtcggaa 30175246  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||||||    
T  30175245 ccatagctgagggcaggtagatatgcaacttgctggagatagaatct 30175199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 110 - 195
Target Start/End: Original strand, 31819766 - 31819851
Alignment:
Q  110 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  31819766 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaacttgctggagatagaatct 31819851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 32589559 - 32589705
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||| ||| ||||||||||||||||| ||||||    
T  32589559 agacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggggatgacgtcgttgggagacgtgtcggaa 32589658  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    |||| ||||||||||||||| ||| ||||||||||| ||||||||||    
T  32589659 ccatagctgagggcaggtagatatacaacttgctggagatagaatct 32589705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 34623376 - 34623230
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| |||||||||||||||||||||||     
T  34623376 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggag 34623277  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    ||| ||||| |||||||||| ||||||||||||||||||||||||||    
T  34623276 ccaaggctgggggcaggtaggtatgcaacttgctggggatagaatct 34623230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 57 - 214
Target Start/End: Complemental strand, 3796410 - 3796245
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||| ||||||||||||||||||||||||| || | |        ||| |||||||||||||| |||||||||||||||||||||||     
T  3796410 agacaagacattagagcattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggag 3796311  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctgggga 214  Q
    ||| ||||||||||||| || ||||||||||||||| ||||||||||  ||||||| | |||||||    
T  3796310 ccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttactgggga 3796245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 30158897 - 30158725
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| |||||||||||||||||||| |||    
T  30158897 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcagaa 30158798  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||| ||||||||  |||||| ||||||||||||||| ||||||||||  |||||||   ||||||| ||||||    
T  30158797 ccaaggctgaggataggtaggtatgcaacttgctggagatagaatcttggaagacttgactggggaaaatgcc 30158725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 57 - 183
Target Start/End: Complemental strand, 5644677 - 5644543
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| ||||||    
T  5644677 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 5644578  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctg 183  Q
    |||| ||||||||||||||| ||||||||||||||    
T  5644577 ccatagctgagggcaggtagatatgcaacttgctg 5644543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 57 - 191
Target Start/End: Complemental strand, 11330511 - 11330369
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||| ||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  11330511 agacaagacattagagtattgggcacgtagcggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 11330412  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggataga 191  Q
    ||||||| |||||| ||||| |||| |||||||||||||||||    
T  11330411 ccatggccgagggccggtaggtatgtaacttgctggggataga 11330369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 33881983 - 33881837
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    ||||||||| || ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| |||||||||||||||||||||| |    
T  33881983 agacaagacgttagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggga 33881884  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    ||  |||||||||||||||| ||||||||||||||| ||||||||||    
T  33881883 cctaggctgagggcaggtagatatgcaacttgctggagatagaatct 33881837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 28656122 - 28655976
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgcta-------cat-catagaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| |||||||||||||||||||||||||||||       ||| | | ||| || ||||||||||| |||||||||||||||||||||||     
T  28656122 agacaagacattagagtattgggcacgtagtggctcgtgctatgttacacattcttggaaatcttctttggagatgacgtcgttgggagacgtatcggag 28656023  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
     || |||||||||||||||| |||||| |||||||||||||||||||    
T  28656022 tcaaggctgagggcaggtaggtatgcaccttgctggggatagaatct 28655976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 57 - 272
Target Start/End: Original strand, 13318110 - 13318332
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  || |||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| |||| |    
T  13318110 agacaagacatcagaatattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggga 13318209  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtcagtgttggg 248  Q
    ||  ||||||||||||| || ||||||||||||||| ||||||||||  ||||||| | ||||||| || ||| |   |||| ||||| |||||| ||||    
T  13318210 cctaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgt-tgtgctgggcatttcagtgctggg 13318308  T
Q  249 tatgtcatagatatcgcatctgtg 272  Q
    || ||  |||||||||||||||||    
T  13318309 tacgttgtagatatcgcatctgtg 13318332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 13435953 - 13436099
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||| |||||||||||||| ||     
T  13435953 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcattgggagacgtatcagag 13436052  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    ||| |||||||||| ||||| ||||||||||||||||||||||||||    
T  13436053 ccaaggctgagggctggtaggtatgcaacttgctggggatagaatct 13436099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 57 - 191
Target Start/End: Original strand, 18368814 - 18368956
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||  | |||| ||||||| ||||||||||||||||||||||||    
T  18368814 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggagattctctatggagatgacgtcgttgggagacgtatcggaa 18368913  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggataga 191  Q
    ||||||| |||||| ||||| |||| |||||||||||||||||    
T  18368914 ccatggccgagggccggtaggtatgtaacttgctggggataga 18368956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 37664788 - 37664934
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    ||||||||| || ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| ||||||    
T  37664788 agacaagacgttagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggaa 37664887  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    ||| |||||||||  || || ||||||||||||||| ||||||||||    
T  37664888 ccaaggctgagggtgggcaggtatgcaacttgctggagatagaatct 37664934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 98
Target Start/End: Original strand, 13178783 - 13178824
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgcta 98  Q
    |||||||||||| ||||||||||||||| |||||||||||||    
T  13178783 agacaagacattagagtattgggcacgtggtggctcgtgcta 13178824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 121; Significance: 5e-62; HSPs: 2)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 49 - 249
Target Start/End: Complemental strand, 12931 - 12722
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |        ||| |||||||||||||||||||||||||||||||    
T  12931 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacattacacatccctggaaatcctctttggagataacgtcgttgggagacg 12832  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct-ggggataatgccctcattgctaggcatgtc 239  Q
    ||||||||||| ||| ||||||||||||||||| |||||| || |||||||||||| |||||||||||| |||||||||||| |||||||| ||||| ||    
T  12831 tatcggaaccacggccgagggcaggtagctatgaaacttgttgcggatagaatctcggaagactctgctgggggataatgccgtcattgctgggcatttc 12732  T
Q  240 agtgttgggt 249  Q
    |||| |||||    
T  12731 agtgctgggt 12722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 2529 - 2383
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||| ||||||||||||||||||||||||| || | |        ||| |||||||||||||| |||| |||||||||||| ||||||    
T  2529 agacaagacattagagcattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgttgttgggagacgtgtcggaa 2430  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    |||  ||||||||||||||| ||| ||||||||||| ||||||||||    
T  2429 ccaaagctgagggcaggtagatatacaacttgctggagatagaatct 2383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 120; Significance: 2e-61; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 57 - 272
Target Start/End: Original strand, 27623058 - 27623272
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcatagaagtcctctttggagataacgtcgttgggagacgtatcggaaccatggct 156  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| | |||||||||||    
T  27623058 agacaagacattagagtattgggcacgtagtggctcgtgctacatcatagaaatcctctttggagataacgccgttgggagacgtaccagaaccatggct 27623157  T
Q  157 gagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtcagtgttgggtatgtcat 256  Q
    ||||| || ||||||  ||||||||||||||||||||||  |||||| |  |||||||||| ||| | | |||| ||||| |||||| |||||||||  |    
T  27623158 gagggtagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtta-tgctgggcatttcagtgctgggtatgttgt 27623256  T
Q  257 agatatcgcatctgtg 272  Q
    ||||||||||||||||    
T  27623257 agatatcgcatctgtg 27623272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 51 - 269
Target Start/End: Original strand, 27283707 - 27283924
Alignment:
Q  51 agagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcatagaagtcctctttggagataacgtcgttgggagacgtatcggaacc 150  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||    
T  27283707 agagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcatagaaatcctctttggagataacgccgttgggagacgtaccggaacc 27283806  T
Q  151 atggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtcagtgttgggta 250  Q
    ||||||||||| || ||||||  |||||| |||||||||||||    |||||| |  |||||||||| ||| | | |||| ||||| |||||| ||||||    
T  27283807 atggctgagggtagatagctaatcaacttactggggatagaattctggaagacccgactggggataacgccgtta-tgctgggcatttcagtgctgggta 27283905  T
Q  251 tgtcatagatatcgcatct 269  Q
     ||| ||||||||||||||    
T  27283906 cgtcgtagatatcgcatct 27283924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 16756677 - 16756497
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||    
T  16756677 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 16756578  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||    
T  16756577 tgtcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactgggaataatgcc 16756497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 27209755 - 27209575
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacat--catag------aagtcctctttggagataacgtcgttgggagacg 140  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||  ||||       || |||||||||||||||||||||||||||||||    
T  27209755 gcagagatagacaagacattggagtattgggcacgtagtggctcgtgctagattacatattccagtaaatcctctttggagataacgtcgttgggagacg 27209656  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||| ||||| ||||||||    
T  27209655 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgggagactctactgggaataatgcc 27209575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 27239473 - 27239653
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacat--catag------aagtcctctttggagataacgtcgttgggagacg 140  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||  ||||       || |||||||||||||||||||||||||||||||    
T  27239473 gcagagatagacaagacattggagtattgggcacgtagtggctcgtgctagattacatattccagtaaatcctctttggagataacgtcgttgggagacg 27239572  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||| ||||| ||||||||    
T  27239573 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgggagactctactgggaataatgcc 27239653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 49 - 243
Target Start/End: Original strand, 22928198 - 22928400
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||| || | |        ||| ||||||||||||||||| ||||||||||| |    
T  22928198 gcagagacagacaagacactggagtattgggcacgtaatggctcgtgctatattacacattcctggaaatcctctttggagataacatcgttgggagatg 22928297  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtca 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||| || ||||  ||||| |||    
T  22928298 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactagggataatgccgtcgttgccgggcatttca 22928397  T
Q  241 gtg 243  Q
    |||    
T  22928398 gtg 22928400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 24870564 - 24870384
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||    
T  24870564 gcagagacagacaagacactggagtattgggcacgtaatggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 24870465  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| | ||||||||    
T  24870464 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactgagaataatgcc 24870384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 50 - 221
Target Start/End: Original strand, 24299105 - 24299284
Alignment:
Q  50 cagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgt 141  Q
    ||||||||||||||||| |||||| ||||||||| |||||||||||||| || | |        ||| |||||||||||||| |||||||||||||||||    
T  24299105 cagagacagacaagacactggagtgttgggcacgcagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgt 24299204  T
Q  142 atcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||    
T  24299205 atcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactgggaataatgcc 24299284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 57 - 221
Target Start/End: Original strand, 33369781 - 33369953
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  33369781 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 33369880  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||| ||||||||    
T  33369881 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctactgggaataatgcc 33369953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 49 - 219
Target Start/End: Original strand, 15405874 - 15406052
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcataga--------agtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | | |        | |||||||||||||| ||||||||||||||||    
T  15405874 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctgaaaatcctctttggagatgacgtcgttgggagacg 15405973  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatg 219  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||| ||||| ||||||    
T  15405974 tatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggaaactctactgggaataatg 15406052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 49 - 219
Target Start/End: Original strand, 15417661 - 15417839
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcataga--------agtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | | |        | |||||||||||||| ||||||||||||||||    
T  15417661 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctgaaaatcctctttggagatgacgtcgttgggagacg 15417760  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatg 219  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||| ||||| ||||||    
T  15417761 tatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggaaactctactgggaataatg 15417839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 49 - 220
Target Start/End: Complemental strand, 27031877 - 27031698
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||| ||||| |||||||||||| |||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||    
T  27031877 gcagagacagacaagacactggagcattgggcacgtaatggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 27031778  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgc 220  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||| ||||| |||||||    
T  27031777 tatcggaaccatggctgagggcaggtagttatgcaacttgctggggataggatctcggaagactctactgggaataatgc 27031698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 57 - 221
Target Start/End: Original strand, 4539110 - 4539282
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  4539110 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 4539209  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||   ||||| | ||||||||||||||    
T  4539210 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgagagactttactggggataatgcc 4539282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 57 - 221
Target Start/End: Original strand, 14138752 - 14138924
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  14138752 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 14138851  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||| ||||| ||||||||    
T  14138852 ccatggctgagggcaggtaggtatgcaactcgctggggatagaatctcggaagactctactgggaataatgcc 14138924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 27025998 - 27025818
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcataga--------agtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | | |        | |||||||||||||| ||||||||||||||||    
T  27025998 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctgaaaatcctctttggagatgacgtcgttgggagacg 27025899  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||| |||| |||||||||| ||||| ||||||||||||||||||||||||||  | ||||||| ||||| ||||||||    
T  27025898 tatcgggaccaaggctgagggccggtagttatgcaacttgctggggatagaatcttgggagactctactgggaataatgcc 27025818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 57 - 217
Target Start/End: Complemental strand, 29508269 - 29508101
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  29508269 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 29508170  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataa 217  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||| ||||| ||||    
T  29508169 ccatggctgagggcaggtaggtatgtaacttgctggggatagaatctcggaagactctactgggaataa 29508101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 13292288 - 13292469
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||| ||||    
T  13292288 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggggacg 13292387  T
Q  141 tatcggaaccatggctgagggcaggtag-ctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||| |||| |||||||||| ||||| |||||||||||||||||||||||||||  | ||||||| ||||| ||||||||    
T  13292388 tatcgggaccaaggctgagggccggtagtctatgcaacttgctggggatagaatcttgggagactctactgggaataatgcc 13292469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 26927608 - 26927428
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||||||| ||||||||||||    
T  26927608 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagataacgccgttgggagacg 26927509  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||||||||||| ||||||||  || ||||||  ||||| ||||||||||||||||| | ||||||| ||||| ||||||||    
T  26927508 tatcggaaccaaggctgaggatagatagctaatcaactcgctggggatagaatctcgggagactctactgggaataatgcc 26927428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 27014572 - 27014400
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||| ||||    
T  27014572 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtattggaa 27014473  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||||||||||||||||| ||||| ||| ||||||||||||||||| ||||||||| ||||| ||||||||    
T  27014472 ccatggctgagggcaggtaggtatgcgactcgctggggatagaatctcggaagactctactgggaataatgcc 27014400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 27201045 - 27200899
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  |||||||||||||||||||||||| |||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  27201045 agacaagacatcagagtattgggcacgtagtggctcgagctatattacaccttcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 27200946  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  27200945 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 27200899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 27248188 - 27248334
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  |||||||||||||||||||||||| |||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  27248188 agacaagacatcagagtattgggcacgtagtggctcgagctatattacaccttcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 27248287  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  27248288 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 27248334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 57 - 221
Target Start/End: Original strand, 26109752 - 26109925
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgcta--------catcatagaagtcctctttggagataacgtcgtt-gggagacgtatcgga 147  Q
    |||| ||||||  |||||||||||||||||||||||||||||        | || | ||| |||||||||||||| |||||||| |||||||||||||||    
T  26109752 agacgagacatcagagtattgggcacgtagtggctcgtgctatgttacaccttcttggaaatcctctttggagatgacgtcgtttgggagacgtatcgga 26109851  T
Q  148 accatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||   ||||| | ||||||||||||||    
T  26109852 accatggctgagggcaggtagctatgcaacttgctggggatagaatctcgagagactttactggggataatgcc 26109925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 29556404 - 29556232
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||| |||| |||| ||| ||||||||||||||||||||    
T  29556404 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctttttgaagatgacgccgttgggagacgtatcggaa 29556305  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||||||||||||| |||  |||||||||||||||||||||||||| ||||||||| ||||| ||||||||    
T  29556304 ccatggctgagggcagataggcatgcaacttgctggggatagaatctcggaagactctactgggaataatgcc 29556232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 57 - 272
Target Start/End: Complemental strand, 28214316 - 28214094
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  28214316 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 28214217  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtcagtgttggg 248  Q
    |||||||||||||||||||||||| |||||||||||  || ||||||| |||| || | ||||||| || ||| | | |||| ||||| |||||| ||||    
T  28214216 ccatggctgagggcaggtagctatacaacttgctggaaattgaatctcggaaggctttactggggaaaacgccgtta-tgctgggcatttcagtgctggg 28214118  T
Q  249 tatgtcatagatatcgcatctgtg 272  Q
    || ||  |||| ||||||||||||    
T  28214117 tacgttgtagacatcgcatctgtg 28214094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 4764610 - 4764464
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||| ||||    
T  4764610 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtattggaa 4764511  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  4764510 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatct 4764464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 26792664 - 26792492
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||  ||||||||||||||||||| ||||    
T  26792664 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagacgacgtcgttgggagacgtattggaa 26792565  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    ||||| | ||||||||||||||    
T  26792564 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatcttgagagactttactggggataatgcc 26792492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 57 - 272
Target Start/End: Original strand, 34457837 - 34458059
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||| ||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| ||||||    
T  34457837 agacaagacattagagtattgggcacatagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 34457936  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctg-ctggggataatgccctcattgctaggcatgtcagtgttgg 247  Q
    |||| ||||||||||||||| ||||||||||||||| |||||| |||  |||||| ||| ||||||| |||||| |   |||| ||||| |||||| |||    
T  34457937 ccatagctgagggcaggtagatatgcaacttgctggagatagagtcttggaagac-ctgactggggaaaatgccgt-tgtgctgggcatttcagtgctgg 34458034  T
Q  248 gtatgtcatagatatcgcatctgtg 272  Q
    ||||||  |||| ||||||||||||    
T  34458035 gtatgttgtagacatcgcatctgtg 34458059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 30551331 - 30551477
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||| ||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| ||||||    
T  30551331 agacaagatatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 30551430  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||    
T  30551431 ccatagctgagggcaggtagctatgcatcttgctggggatagaatct 30551477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 57 - 272
Target Start/End: Complemental strand, 27064349 - 27064127
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| |||||||||||||||||||| |||    
T  27064349 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcagaa 27064250  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtcagtgttggg 248  Q
    ||||||||||||||||| |  ||||| ||||||||| ||||||||||  |||||| |  ||||||| || ||| |   |||| ||||| |||| | ||||    
T  27064249 ccatggctgagggcaggcaagtatgcgacttgctggagatagaatcttggaagacccgactggggaaaacgccgt-tgtgctgggcatttcagcgctggg 27064151  T
Q  249 tatgtcatagatatcgcatctgtg 272  Q
    ||||| ||||| || |||||||||    
T  27064150 tatgttatagacattgcatctgtg 27064127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 13517545 - 13517691
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    ||||||||| || ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| |||||||||||||||||||||| |    
T  13517545 agacaagacgttagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggga 13517644  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    ||  |||||||||||||||| ||||||||||||||| ||||||||||    
T  13517645 cctaggctgagggcaggtagatatgcaacttgctggagatagaatct 13517691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 27355434 - 27355580
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||| ||||||| ||||||||||| |||||||||||     
T  27355434 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctatggagatgacgtcgttgggggacgtatcggag 27355533  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    ||| |||||||||||||||| ||||||||||||||||||||||||||    
T  27355534 ccaaggctgagggcaggtaggtatgcaacttgctggggatagaatct 27355580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 4532142 - 4531970
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  |||||||||||||||||||||||| |||| || | |        ||| |||||||||||||| ||||||||||||||||| |||| |    
T  4532142 agacaagacatcagagtattgggcacgtagtggctcgagctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggga 4532043  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||  |||||||||| ||||||||||||||||||||||||||||||||    ||||| | ||||||||||||||    
T  4532042 cctaggctgagggctggtagctatgcaacttgctggggatagaatcttgagagactttactggggataatgcc 4531970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 56 - 187
Target Start/End: Complemental strand, 20131369 - 20131229
Alignment:
Q  56 cagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcgga 147  Q
    |||||||||||| ||||| |||||||||||||||||||||||| |||| |        ||| ||||||||||||||| |||||||||||||||||||| |    
T  20131369 cagacaagacatcggagtgttgggcacgtagtggctcgtgctatatcacacattcctggaaatcctctttggagatatcgtcgttgggagacgtatcgaa 20131270  T
Q  148 accatggctgagggca-ggtagctatgcaacttgctgggga 187  Q
    |||||||||||||||| ||||| |||||||||| |||||||    
T  20131269 accatggctgagggcagggtagttatgcaacttactgggga 20131229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 56 - 187
Target Start/End: Original strand, 22201501 - 22201641
Alignment:
Q  56 cagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcgga 147  Q
    |||||||||||| ||||| |||||||||||||||||||||||| |||| |        ||| ||||||||||||||| |||||||||||||||||||| |    
T  22201501 cagacaagacatcggagtgttgggcacgtagtggctcgtgctatatcacacattcctggaaatcctctttggagatatcgtcgttgggagacgtatcgaa 22201600  T
Q  148 accatggctgagggca-ggtagctatgcaacttgctgggga 187  Q
    |||||||||||||||| ||||| |||||||||| |||||||    
T  22201601 accatggctgagggcagggtagttatgcaacttactgggga 22201641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 28167342 - 28167170
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| |||| |    
T  28167342 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggga 28167243  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||  |||||||||| |||||||||||||||||||||||||||| |||  | ||||||| | ||| ||||||||    
T  28167242 cctaggctgagggccggtagctatgcaacttgctggggatagagtcttgggagactctaccgggaataatgcc 28167170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 57 - 272
Target Start/End: Complemental strand, 29579882 - 29579660
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||| ||||||| || | |        ||| |||||| ||||||| ||||||||||||||||||||||||    
T  29579882 agacaagacattagagtattgggcacgtagtggcccgtgctatattacacattcttggaaatcctctatggagatgacgtcgttgggagacgtatcggaa 29579783  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctg-ctggggataatgccctcattgctaggcatgtcagtgttgg 247  Q
    ||||||| |||||| ||||| | ||||||||||||| ||||||||||  |||||| ||| ||||||| |||||| |   |||| ||||| |||||| |||    
T  29579782 ccatggccgagggccggtaggtgtgcaacttgctggagatagaatcttggaagac-ctgactggggagaatgccgt-tgtgctgggcatttcagtgctgg 29579685  T
Q  248 gtatgtcatagatatcgcatctgtg 272  Q
    ||||||  |||| || |||||||||    
T  29579684 gtatgttgtagacattgcatctgtg 29579660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 57 - 191
Target Start/End: Original strand, 8899028 - 8899170
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgcta-------catcatagaag-tcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| |||||||||||||||||||||||||||||       |||  | | || |||||| ||||||| ||||||||||||||||||||||||    
T  8899028 agacaagacattagagtattgggcacgtagtggctcgtgctatgttacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaa 8899127  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggataga 191  Q
    ||||||| |||||| ||||| |||| |||||||||||||||||    
T  8899128 ccatggccgagggccggtaggtatgtaacttgctggggataga 8899170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 57 - 214
Target Start/End: Original strand, 26665988 - 26666153
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| |||| |    
T  26665988 agacaagacattagagtattgggcacgtagtggctcgtgctatatgacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggga 26666087  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctgggga 214  Q
    ||  |||||||||  || || ||||||||||||||| ||||||||||  ||||||| | |||||||    
T  26666088 cctaggctgagggtgggcaggtatgcaacttgctggagatagaatcttggaagactttactgggga 26666153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 57 - 214
Target Start/End: Original strand, 26771959 - 26772124
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| |||| |    
T  26771959 agacaagacattagagtattgggcacgtagtggctcgtgctatatgacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggga 26772058  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctgggga 214  Q
    ||  |||||||||  || || ||||||||||||||| ||||||||||  ||||||| | |||||||    
T  26772059 cctaggctgagggtgggcaggtatgcaacttgctggagatagaatcttggaagactttactgggga 26772124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 27491987 - 27491840
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  |||||||||||||||||| |||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| |||| |    
T  27491987 agacaagacatcagagtattgggcacgtagtagctcgtgctatattacaccttcttggaaatcctctttggagatgacgtcgttgggagacgtttcggga 27491888  T
Q  149 ccatggctgagggcaggtagctatgcaacttgc-tggggatagaatct 195  Q
    |||||||||||||||||||| ||  |||||||| ||||||||||||||    
T  27491887 ccatggctgagggcaggtaggtaaacaacttgcttggggatagaatct 27491840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 110 - 191
Target Start/End: Complemental strand, 16680946 - 16680865
Alignment:
Q  110 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggataga 191  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||| |||||| ||||| |||| |||||||||||||||||    
T  16680946 tcctctatggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggtatgtaacttgctggggataga 16680865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 57 - 191
Target Start/End: Original strand, 16937357 - 16937499
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||  | |||| ||||||| ||||||||||||||||||||||||    
T  16937357 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggagattctctatggagatgacgtcgttgggagacgtatcggaa 16937456  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggataga 191  Q
    ||||||| |||||| ||||| ||||  ||||||||||||||||    
T  16937457 ccatggccgagggccggtaggtatgtgacttgctggggataga 16937499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 4779698 - 4779594
Alignment:
Q  110 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgct 209  Q
    |||||||||||||| ||||||||||||||||| |||| |||  ||||||||||||| || ||||||||||||||| ||||||||||  ||||||| | ||    
T  4779698 tcctctttggagatgacgtcgttgggagacgtttcgggacctaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttact 4779599  T
Q  210 gggga 214  Q
    |||||    
T  4779598 gggga 4779594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 99
Target Start/End: Complemental strand, 20175411 - 20175368
Alignment:
Q  56 cagacaagacattggagtattgggcacgtagtggctcgtgctac 99  Q
    ||||| |||||| ||||||||| |||||||||||||||||||||    
T  20175411 cagacgagacatcggagtattgagcacgtagtggctcgtgctac 20175368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 99
Target Start/End: Original strand, 22160580 - 22160623
Alignment:
Q  56 cagacaagacattggagtattgggcacgtagtggctcgtgctac 99  Q
    ||||| |||||| ||||||||| |||||||||||||||||||||    
T  22160580 cagacgagacatcggagtattgagcacgtagtggctcgtgctac 22160623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 16681007 - 16680966
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgcta 98  Q
    |||||||||||  ||||||||||||| |||||||||||||||    
T  16681007 agacaagacatcagagtattgggcacatagtggctcgtgcta 16680966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 116; Significance: 5e-59; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 652 - 472
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| || | |        ||| |||||||||||||||||||||||||||||||    
T  652 gcagagacagacaagacattggagtattgggcacgtagtgtctcgtgctatattacacattcccggaaatcctctttggagataacgtcgttgggagacg 553  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||| ||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  552 tatcagaaccatggttgagggcaggtagctatgcaacctgctggggatagaatctcggaagactctgctggggataatgcc 472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 49 - 249
Target Start/End: Original strand, 25946 - 26154
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    ||||||||| |||| |||||||| |||||||||||||||||||| ||||| |||| |        ||| |||||||||||||||||||||||||||||||    
T  25946 gcagagacacacaaaacattggactattgggcacgtagtggctcatgctatatcacacattcttggaaatcctctttggagataacgtcgttgggagacg 26045  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtca 240  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||| ||||| |||||| || |||| ||| ||||| |||    
T  26046 tatcggaaccatggctgagggcaggtagctaagcaacttgctggggaaagaatctcggaagactccgctggagataataccgtcatcgctgggcatttca 26145  T
Q  241 gtgttgggt 249  Q
    |||||||||    
T  26146 gtgttgggt 26154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 52 - 221
Target Start/End: Original strand, 24353 - 24530
Alignment:
Q  52 gagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtat 143  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||| || | |        ||| | |||||||||||| |||||||||||||||||||    
T  24353 gagacagacaagacactggagtattgggcacgtaatggctcgtgctatattacacattcctggaaattctctttggagatgacgtcgttgggagacgtat 24452  T
Q  144 cggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||    
T  24453 cggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactgggaataatgcc 24530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0792 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0792
Description:

Target: scaffold0792; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 3992 - 4172
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| || | |        ||  |||||||||||||| ||||||||||||||||    
T  3992 gcagagacagacaagacattggagtattgggcacgcagtggctcgtgctatattacacattcttggacatcctctttggagatgacgtcgttgggagacg 4091  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||| ||||| ||||||||    
T  4092 tatcgggaccatggctaagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgcc 4172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0547 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0547
Description:

Target: scaffold0547; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 49 - 220
Target Start/End: Original strand, 9037 - 9217
Alignment:
Q  49 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacg 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||  |||||||||||||| ||||||||||||||||    
T  9037 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggacatcctctttggagatgacgtcgttgggagacg 9136  T
Q  141 tatcggaaccatggctgagggcaggtagctatgcaacttgc-tggggatagaatctcagaagactctgctggggataatgc 220  Q
    | ||||||||||||||||||||||||||| ||||||||||| || |||||||||||| ||||||||| ||||| |||||||    
T  9137 tgtcggaaccatggctgagggcaggtagccatgcaacttgcttgaggatagaatctcggaagactctactgggaataatgc 9217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 50 - 221
Target Start/End: Complemental strand, 34151 - 33972
Alignment:
Q  50 cagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgt 141  Q
    ||||||||||||||||| |||||| ||||||||| |||||||||||||| || | |        ||| |||||||||||||| |||||||||||||||||    
T  34151 cagagacagacaagacactggagtgttgggcacgcagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgt 34052  T
Q  142 atcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||| ||||| ||||||||    
T  34051 atcgggaccatggctgagggcaggtagctatgcaacttgctgaggatagaatctcgggagactctactgggaataatgcc 33972  T

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Target: scaffold0143; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 57 - 214
Target Start/End: Complemental strand, 10791 - 10625
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata---------gaagtcctctttggagataacgtcgttgggagacgtatcgga 147  Q
    |||||||||||| || |||||||||||||||||||||||||| || | |         ||| |||||||||||||| ||||||||||||||||| |||||    
T  10791 agacaagacattagaatattgggcacgtagtggctcgtgctatattacacatttcttggaaatcctctttggagatgacgtcgttgggagacgtttcgga 10692  T
Q  148 accatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctgggga 214  Q
    ||||||||||||| |||||||||||||||||||||||  |||||||||  ||||||| | |||||||    
T  10691 accatggctgaggacaggtagctatgcaacttgctggaaatagaatcttggaagactttactgggga 10625  T

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Target: scaffold0038 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 57 - 272
Target Start/End: Complemental strand, 14814 - 14592
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||||||||||    
T  14814 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 14715  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgccctcattgctaggcatgtcagtgttggg 248  Q
    |||||||||||||||||||||||| |||||||||||  || ||||||| |||| || | ||||||| || ||| | | |||| ||||| |||||| ||||    
T  14714 ccatggctgagggcaggtagctatacaacttgctggaaattgaatctcggaaggctttactggggaaaacgccgtta-tgctgggcatttcagtgctggg 14616  T
Q  249 tatgtcatagatatcgcatctgtg 272  Q
    || ||  |||| ||||||||||||    
T  14615 tacgttgtagacatcgcatctgtg 14592  T

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Target: scaffold0099 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 110 - 221
Target Start/End: Original strand, 40067 - 40180
Alignment:
Q  110 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctga-gggcaggtagct-atgcaacttgctggggatagaatctcagaagactctg 207  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||| |||||||||     
T  40067 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgaggggcaggtagttaatgcaacttgctggggatagaatctcggaagactcta 40166  T
Q  208 ctggggataatgcc 221  Q
    ||||| ||||||||    
T  40167 ctgggaataatgcc 40180  T

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Target: scaffold0418 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 12888 - 12716
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| |||| |    
T  12888 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggga 12789  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||  |||||||||| |||||||||||||||||||||||||||| |||  | ||||||| ||||| ||||||||    
T  12788 cctaggctgagggccggtagctatgcaacttgctggggatagagtcttgggagactctactgggaataatgcc 12716  T

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Target: scaffold0237 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 57 - 221
Target Start/End: Original strand, 8325 - 8497
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| |||||||||||||||||||| |||    
T  8325 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcagaa 8424  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||| |||||||||||||||| ||||||||||||||| ||||||||||  ||||||| | | ||||| ||||||    
T  8425 ccaaggctgagggcaggtaggtatgcaacttgctggagatagaatcttggaagactttaccggggacaatgcc 8497  T

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Target: scaffold0159 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 2561 - 2707
Alignment:
Q  57 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgtcgttgggagacgtatcggaa 148  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||||||||||||||||| ||||||    
T  2561 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 2660  T
Q  149 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||||||    
T  2661 ccatagctgagggcaggtagatatgcaacttgctggagatagaatct 2707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 18582 - 18534
Alignment:
Q  147 aaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 195  Q
    |||||| ||||||||||||||| ||||||||||||||| ||||||||||    
T  18582 aaccatagctgagggcaggtagatatgcaacttgctggagatagaatct 18534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 110 - 191
Target Start/End: Complemental strand, 16387 - 16306
Alignment:
Q  110 tcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggataga 191  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||| |||| |||| ||||||||||||    
T  16387 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggtatgtaactggctggggataga 16306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 6807 - 6742
Alignment:
Q  156 tgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataatgcc 221  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||    
T  6807 tgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactgggaataatgcc 6742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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