View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0025-Insertion-11 (Length: 1001)

Name: NF0025-Insertion-11
Description: NF0025
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0025-Insertion-11
NF0025-Insertion-11
[»] chr3 (19 HSPs)
chr3 (248-822)||(1830904-1831475)
chr3 (7-207)||(1830201-1830401)
chr3 (907-996)||(1831561-1831656)
chr3 (156-203)||(25892467-25892514)
chr3 (202-246)||(1830838-1830882)
chr3 (155-203)||(3730170-3730218)
chr3 (156-202)||(20691326-20691372)
chr3 (140-197)||(25074780-25074837)
chr3 (156-203)||(12704662-12704709)
chr3 (156-203)||(21149074-21149121)
chr3 (156-203)||(34189434-34189481)
chr3 (156-203)||(52369782-52369829)
chr3 (141-203)||(15864825-15864887)
chr3 (144-190)||(16789668-16789714)
chr3 (113-191)||(20503429-20503507)
chr3 (141-203)||(24205046-24205108)
chr3 (141-202)||(8039198-8039259)
chr3 (156-203)||(25365469-25365516)
chr3 (112-202)||(40993341-40993432)
[»] chr4 (21 HSPs)
chr4 (148-201)||(31243555-31243608)
chr4 (141-200)||(20743286-20743345)
chr4 (112-200)||(5654599-5654687)
chr4 (141-203)||(24343499-24343561)
chr4 (141-198)||(7012058-7012115)
chr4 (156-201)||(34515881-34515926)
chr4 (156-203)||(3144657-3144704)
chr4 (141-200)||(32910543-32910602)
chr4 (156-203)||(53968553-53968600)
chr4 (141-195)||(10546140-10546194)
chr4 (156-201)||(18513248-18513293)
chr4 (156-200)||(30520444-30520489)
chr4 (156-200)||(39507127-39507171)
chr4 (156-203)||(19230314-19230361)
chr4 (146-193)||(51673457-51673504)
chr4 (156-202)||(14465300-14465346)
chr4 (141-203)||(16402216-16402278)
chr4 (144-194)||(17446066-17446116)
chr4 (141-191)||(21945495-21945545)
chr4 (158-200)||(46180944-46180986)
chr4 (141-202)||(17734964-17735024)
[»] chr2 (26 HSPs)
chr2 (147-203)||(25544479-25544535)
chr2 (146-203)||(10535764-10535821)
chr2 (146-202)||(24011033-24011089)
chr2 (156-202)||(4229414-4229460)
chr2 (141-199)||(19573970-19574028)
chr2 (141-203)||(23354657-23354719)
chr2 (156-202)||(34006997-34007043)
chr2 (131-200)||(12748666-12748735)
chr2 (149-194)||(22085004-22085049)
chr2 (159-203)||(11308009-11308053)
chr2 (156-195)||(31026702-31026741)
chr2 (149-191)||(12933753-12933795)
chr2 (156-194)||(30298461-30298499)
chr2 (156-201)||(18570979-18571024)
chr2 (156-201)||(23406875-23406920)
chr2 (159-195)||(17520083-17520119)
chr2 (141-201)||(23355002-23355062)
chr2 (141-191)||(21782835-21782885)
chr2 (167-201)||(30394475-30394509)
chr2 (142-191)||(4332919-4332968)
chr2 (157-202)||(12668429-12668474)
chr2 (156-193)||(16630802-16630839)
chr2 (157-202)||(18889597-18889642)
chr2 (135-200)||(21616748-21616813)
chr2 (141-202)||(37411250-37411311)
chr2 (158-195)||(44776608-44776645)
[»] chr6 (27 HSPs)
chr6 (156-203)||(34446572-34446619)
chr6 (156-203)||(12235524-12235571)
chr6 (146-203)||(6389740-6389797)
chr6 (150-198)||(19602191-19602239)
chr6 (112-202)||(10842494-10842585)
chr6 (156-203)||(12086350-12086397)
chr6 (141-203)||(17168468-17168530)
chr6 (141-202)||(2153893-2153954)
chr6 (141-202)||(13364711-13364772)
chr6 (156-200)||(7569176-7569220)
chr6 (112-202)||(28862083-28862175)
chr6 (157-201)||(30781301-30781345)
chr6 (156-203)||(6299519-6299566)
chr6 (156-203)||(6306329-6306376)
chr6 (156-203)||(26247433-26247480)
chr6 (157-200)||(32511674-32511717)
chr6 (150-201)||(34895041-34895092)
chr6 (141-191)||(7996395-7996445)
chr6 (141-191)||(8022356-8022406)
chr6 (159-201)||(9024183-9024225)
chr6 (148-202)||(9195760-9195814)
chr6 (157-191)||(9658887-9658921)
chr6 (128-202)||(18252757-18252831)
chr6 (140-202)||(26562680-26562742)
chr6 (157-202)||(7265599-7265644)
chr6 (157-202)||(9025500-9025545)
chr6 (141-202)||(26178687-26178748)
[»] chr7 (20 HSPs)
chr7 (150-203)||(12278836-12278889)
chr7 (124-203)||(29812669-29812746)
chr7 (141-203)||(38804560-38804622)
chr7 (159-199)||(7133287-7133327)
chr7 (160-200)||(23930230-23930270)
chr7 (156-203)||(17780089-17780136)
chr7 (135-202)||(38134412-38134479)
chr7 (160-202)||(18233604-18233646)
chr7 (141-203)||(43249985-43250047)
chr7 (124-201)||(4909126-4909203)
chr7 (157-202)||(27732245-27732290)
chr7 (129-200)||(3801213-3801284)
chr7 (156-203)||(22683760-22683807)
chr7 (156-203)||(23751907-23751954)
chr7 (120-202)||(3554512-3554594)
chr7 (141-203)||(4017799-4017861)
chr7 (150-200)||(36314635-36314685)
chr7 (141-202)||(15902814-15902875)
chr7 (157-202)||(21140988-21141033)
chr7 (156-193)||(44172905-44172942)
[»] scaffold0022 (1 HSPs)
scaffold0022 (124-200)||(99868-99944)
[»] chr8 (23 HSPs)
chr8 (141-201)||(28883885-28883945)
chr8 (128-202)||(4786344-4786418)
chr8 (131-203)||(40063935-40064005)
chr8 (155-203)||(39820435-39820483)
chr8 (156-203)||(35431145-35431192)
chr8 (156-202)||(33382025-33382071)
chr8 (141-203)||(44067508-44067570)
chr8 (158-203)||(16869720-16869765)
chr8 (157-202)||(31580133-31580178)
chr8 (157-201)||(3025559-3025603)
chr8 (147-203)||(13845232-13845288)
chr8 (112-191)||(14134661-14134741)
chr8 (156-203)||(1676719-1676766)
chr8 (157-200)||(11803267-11803310)
chr8 (144-195)||(12985387-12985438)
chr8 (156-199)||(30068037-30068080)
chr8 (147-205)||(2035737-2035795)
chr8 (157-195)||(12559119-12559157)
chr8 (150-196)||(26507441-26507487)
chr8 (157-195)||(29198492-29198530)
chr8 (149-191)||(34201063-34201105)
chr8 (149-182)||(24758546-24758579)
chr8 (157-202)||(34897093-34897138)
[»] chr5 (25 HSPs)
chr5 (148-203)||(43554520-43554575)
chr5 (157-203)||(31264446-31264492)
chr5 (167-203)||(26205765-26205801)
chr5 (156-191)||(18162062-18162097)
chr5 (156-203)||(18607102-18607149)
chr5 (115-202)||(3966467-3966556)
chr5 (131-200)||(28296310-28296379)
chr5 (157-202)||(28588680-28588725)
chr5 (158-203)||(39696004-39696049)
chr5 (141-198)||(42469213-42469270)
chr5 (147-195)||(2577193-2577241)
chr5 (156-200)||(19293431-19293475)
chr5 (155-203)||(25863210-25863258)
chr5 (112-191)||(43001762-43001842)
chr5 (156-203)||(5467983-5468030)
chr5 (156-202)||(2548394-2548440)
chr5 (156-194)||(4344749-4344787)
chr5 (156-194)||(11596469-11596507)
chr5 (156-202)||(17925178-17925224)
chr5 (157-203)||(21137697-21137743)
chr5 (149-194)||(2419857-2419902)
chr5 (121-202)||(11685911-11685992)
chr5 (156-201)||(18288058-18288103)
chr5 (113-190)||(19429396-19429473)
chr5 (157-202)||(23015995-23016040)
[»] chr1 (28 HSPs)
chr1 (148-200)||(7988459-7988511)
chr1 (147-203)||(39101187-39101243)
chr1 (156-200)||(42004955-42004999)
chr1 (156-203)||(6936405-6936452)
chr1 (156-202)||(19637775-19637821)
chr1 (157-195)||(21038091-21038129)
chr1 (147-201)||(40747780-40747834)
chr1 (141-190)||(15641048-15641097)
chr1 (131-200)||(25098563-25098632)
chr1 (157-202)||(36878469-36878514)
chr1 (156-203)||(21145473-21145521)
chr1 (141-201)||(30847727-30847787)
chr1 (156-203)||(22794083-22794130)
chr1 (131-202)||(38075976-38076047)
chr1 (121-191)||(51409996-51410067)
chr1 (156-194)||(3921674-3921712)
chr1 (157-191)||(5376517-5376551)
chr1 (156-202)||(11412774-11412820)
chr1 (157-202)||(12040688-12040734)
chr1 (146-200)||(13436455-13436509)
chr1 (157-203)||(17831536-17831582)
chr1 (156-202)||(24176373-24176419)
chr1 (148-202)||(26462651-26462705)
chr1 (156-190)||(42325567-42325601)
chr1 (157-202)||(1864886-1864931)
chr1 (157-202)||(20157356-20157401)
chr1 (156-185)||(29415755-29415784)
chr1 (135-203)||(48415730-48415799)
[»] scaffold0598 (1 HSPs)
scaffold0598 (156-203)||(8058-8105)
[»] scaffold0778 (1 HSPs)
scaffold0778 (156-203)||(4413-4460)
[»] scaffold0199 (1 HSPs)
scaffold0199 (156-203)||(1956-2003)
[»] scaffold0049 (1 HSPs)
scaffold0049 (159-201)||(56932-56974)
[»] scaffold0007 (1 HSPs)
scaffold0007 (141-203)||(225273-225335)
[»] scaffold0085 (1 HSPs)
scaffold0085 (156-201)||(26005-26050)


Alignment Details
Target: chr3 (Bit Score: 480; Significance: 0; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 480; E-Value: 0
Query Start/End: Original strand, 248 - 822
Target Start/End: Original strand, 1830904 - 1831475
Alignment:
Q  248 ctggagtgcgatccctacttaaattgggtcgtatcacactttaaagaaaagtctttacagtgcaagtttatatgtctgaaaaacagnnnnnnnnaagctt 347  Q
    |||||||| ||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||        ||||||    
T  1830904 ctggagtgtgatccctacttgaattgggtcgtatcatactttaaagaaaagtctgtacagtgcaagtttatatgtctgaagaacagttttttttaagctt 1831003  T
Q  348 aaagtagattaaaataaaggaaaataaccaaaatatggaggacatggacctagcaaaagtccacataacagttacataagagagcttgaaaaaatattgg 447  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||     
T  1831004 aaagtagattaaaataaaggaaaataaccaaaatatggaggacatggacctagcaaaagtccacataacagttacataagaaagcttgaaaaaatattga 1831103  T
Q  448 catgtagaagaagttaatggttgatgaaaattcttttaatagttatttttctataagcnnnnnnnatatgtgtatccaaagtgactcttgtaagttggtt 547  Q
    ||||||||||   |||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||    
T  1831104 catgtagaag---ttaatggttgatgaaaattcttttaatagttatttttctataagctttttttatatgtgtatccaaagtgactcttgtaagttggtt 1831200  T
Q  548 aatagatggaaaagaaaatacaggacacaaaagctaagcttcaaatctaaatattacttgtataaccattaaataaacctagcagttcttccacttttat 647  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1831201 aatagatggaaaagaaaatacaggacacaaaagctaagcttcaaatccaaatattacttgtataaccattaaataaacctagcagttcttccacttttat 1831300  T
Q  648 atcactattgaataagccttgtgattcagcctatttaaattattcttgcagctttgtttaatttctactttatagcaattgatttaataatcagatgata 747  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1831301 atcactattgaataagccttgtgattcagcctatttaaattattcttgcagctttgtttaatttctactttatagcaattgatttaataatcagatgata 1831400  T
Q  748 aagtgtgtaaaaacaaaatgaacattggtaaaaacaagaaatagcatcattgcttaatttacaccacatgtacca 822  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1831401 aagtgtgtaaaaacaaaatgaacattggtaaaaacaagaattagcatcattgcttaatttacaccacatgtacca 1831475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 185; E-Value: 1e-99
Query Start/End: Original strand, 7 - 207
Target Start/End: Original strand, 1830201 - 1830401
Alignment:
Q  7 attattttctacagacatatctatgcgtttcattttatgattattttgatagtagtgttgcttgttccaaacccatttggttgacctagtgtgttggctt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1830201 attattttctacagacatatctatgcgtttcattttatgattattttgatagtagtgttgcttgttccaaacccatttggttgacctagtgtgttggctt 1830300  T
Q  107 gagacctatgaagcacggacacgaacacgacaaggacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcgtatt 206  Q
    | ||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1830301 gggacctatgaagcacggacacggacatgacaaggacatgccgacacttttaataatttaagaaaatgacataattcagtgtaatcataggtgtcgtatt 1830400  T
Q  207 g 207  Q
    |    
T  1830401 g 1830401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 907 - 996
Target Start/End: Original strand, 1831561 - 1831656
Alignment:
Q  907 accaaaacctgaaaatgatggtc-aagag-tccagacttctttctgtcgat-gaagttgc-attag-aatcatccactttgggc-actgccactga 996  Q
    ||||||||||||||||||||||| ||||| || |||||||||||||||||| |||||||| ||||| ||||||||||||||||| |||||||||||    
T  1831561 accaaaacctgaaaatgatggtcgaagagttcaagacttctttctgtcgatggaagttgcaattagaaatcatccactttgggcaactgccactga 1831656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 25892467 - 25892514
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  25892467 ataataatttaagaaaatgatataattcagtgtaatcataggtgtcgt 25892514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 246
Target Start/End: Original strand, 1830838 - 1830882
Alignment:
Q  202 gtattgcctcgtgattagaatcaatgaaaaatgatcaatttcctt 246  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  1830838 gtattgcctcgtgattagaatcaatgaaaaataatcaatttcctt 1830882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 203
Target Start/End: Complemental strand, 3730218 - 3730170
Alignment:
Q  155 tataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  3730218 tataataatttgagataatgacataattcagtgtaatcataggtgtcgt 3730170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 202
Target Start/End: Original strand, 20691326 - 20691372
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||    
T  20691326 ataataatttgagaaaatgacataattcagtgtaatcatatgtgtcg 20691372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 25074780 - 25074837
Alignment:
Q  140 ggacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcatagg 197  Q
    ||||| ||||||||  |||||||||| |||||||||||||||| ||||||||||||||    
T  25074780 ggacacgccgacaccgataataatttgagaaaatgacataattgagtgtaatcatagg 25074837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 12704709 - 12704662
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||||||||| | |||||||||||||||| ||||||||||||||||||    
T  12704709 ataataatttgaaaaaatgacataattcaatgtaatcataggtgtcgt 12704662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 21149074 - 21149121
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||||||||| ||||||||||||||||||||||||||| || ||||||    
T  21149074 ataataatttgagaaaatgacataattcagtgtaatcaaagatgtcgt 21149121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 34189434 - 34189481
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||||||||| ||||||||||||| |||||||||||| ||||||||||    
T  34189434 ataataatttgagaaaatgacatatttcagtgtaatcgtaggtgtcgt 34189481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 52369782 - 52369829
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||||||||| ||||||| |||||||||| ||||||||||||||||||    
T  52369782 ataataatttgagaaaattacataattcaatgtaatcataggtgtcgt 52369829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 203
Target Start/End: Original strand, 15864825 - 15864887
Alignment:
Q  141 gacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||| ||||||||  |||||||||| | ||||||| |||||| ||||||||||||||||||||    
T  15864825 gacacgccgacacggataataatttgaaaaaatgatataatttagtgtaatcataggtgtcgt 15864887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 16789714 - 16789668
Alignment:
Q  144 atgccgacacttataataatttaagaaaatgacataattcagtgtaa 190  Q
    ||||||||||  |||||||||| ||||||||||||||||||||||||    
T  16789714 atgccgacacagataataatttgagaaaatgacataattcagtgtaa 16789668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 191
Target Start/End: Original strand, 20503429 - 20503507
Alignment:
Q  113 tatgaagcacggacacgaacacgacaaggacatgccgacacttataataatttaagaaaatgacataattcagtgtaat 191  Q
    ||||||||||||| ||| ||||||||  |||| ||||||||    |||||||| | |||||||||||||||||||||||    
T  20503429 tatgaagcacggatacggacacgacactgacacgccgacacaacaaataatttgaaaaaatgacataattcagtgtaat 20503507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 203
Target Start/End: Complemental strand, 24205108 - 24205046
Alignment:
Q  141 gacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||| ||||||||  |||||||||| ||||||||||||||| ||||||||| ||| |||||||    
T  24205108 gacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgt 24205046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 8039198 - 8039259
Alignment:
Q  141 gacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    |||| ||||||||| || ||||||| |||||||| ||| ||||| |||||||||||||||||    
T  8039198 gacacgccgacactgatgataatttgagaaaatggcatgattcaatgtaatcataggtgtcg 8039259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 25365469 - 25365516
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||||||||| |||| |||||||||||| ||||||||||| |||||||    
T  25365469 ataataatttgagaatatgacataattcggtgtaatcataagtgtcgt 25365516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 202
Target Start/End: Complemental strand, 40993432 - 40993341
Alignment:
Q  112 ctatgaagcacggacacgaacacgacaaggacatgccgacacttataataatttaagaaaa-tgacataattcagtgtaatcataggtgtcg 202  Q
    |||||||||||||| ||| |||||||| |||||   ||||||   ||||||||||| |||| | ||||||||||||||||| ||| ||||||    
T  40993432 ctatgaagcacggatacggacacgacacggacacctcgacaccgctaataatttaaaaaaaatcacataattcagtgtaattatatgtgtcg 40993341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 4e-19; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 148 - 201
Target Start/End: Complemental strand, 31243608 - 31243555
Alignment:
Q  148 cgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtc 201  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  31243608 cgacacttataataatttgagaaaatgacataattcagtgtaatcataggtgtc 31243555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 200
Target Start/End: Complemental strand, 20743345 - 20743286
Alignment:
Q  141 gacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgt 200  Q
    |||| ||||||||  |||||||||| ||||||||||||||||||||||||||||||||||    
T  20743345 gacacgccgacacggataataatttgagaaaatgacataattcagtgtaatcataggtgt 20743286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 200
Target Start/End: Complemental strand, 5654687 - 5654599
Alignment:
Q  112 ctatgaagcacggacacgaacacgacaaggacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgt 200  Q
    ||||||||||| |||||| |||   ||  |||||| ||||||| |||||||||| |||||||||||||||||| |||||||||| ||||    
T  5654687 ctatgaagcacagacacggacaaagcacagacatgtcgacactgataataatttgagaaaatgacataattcaatgtaatcatacgtgt 5654599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 203
Target Start/End: Original strand, 24343499 - 24343561
Alignment:
Q  141 gacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||| ||||||||  |||||||||| ||||||| ||||||||||||||||| |||||||||||    
T  24343499 gacacgccgacacggataataatttgagaaaattacataattcagtgtaattataggtgtcgt 24343561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 7012058 - 7012115
Alignment:
Q  141 gacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggt 198  Q
    |||| ||||||||  |||||||||| |||||||||||||||||||||| |||||||||    
T  7012058 gacacgccgacaccgataataatttgagaaaatgacataattcagtgtgatcataggt 7012115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 34515926 - 34515881
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtc 201  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||    
T  34515926 ataataattcaagaaaatgacataattcagtgtaaacataggtgtc 34515881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 3144704 - 3144657
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||||||||| ||||||||| |||||| ||||||||||||||||||||    
T  3144704 ataataatttcagaaaatgatataatttagtgtaatcataggtgtcgt 3144657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 200
Target Start/End: Original strand, 32910543 - 32910602
Alignment:
Q  141 gacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgt 200  Q
    ||||| |||||||  |||||||||| ||||||||||||||||||||||||| || |||||    
T  32910543 gacataccgacacggataataatttgagaaaatgacataattcagtgtaattatgggtgt 32910602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 53968553 - 53968600
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    ||||||||||||||||||||||||||||||||  ||||||| ||||||    
T  53968553 ataataatttaagaaaatgacataattcagtgatatcatagatgtcgt 53968600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 10546140 - 10546194
Alignment:
Q  141 gacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcata 195  Q
    |||||| ||||| | |||||||||| |||||||||||||||||| ||||||||||    
T  10546140 gacatgtcgacaatgataataatttgagaaaatgacataattcaatgtaatcata 10546194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 18513293 - 18513248
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtc 201  Q
    |||||||||| |||||||||||||||||| |||||||||| |||||    
T  18513293 ataataatttgagaaaatgacataattcaatgtaatcatatgtgtc 18513248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 200
Target Start/End: Complemental strand, 30520489 - 30520444
Alignment:
Q  156 ataataattt-aagaaaatgacataattcagtgtaatcataggtgt 200  Q
    |||||||||| || ||||||||||||||||||||||||||||||||    
T  30520489 ataataatttgaaaaaaatgacataattcagtgtaatcataggtgt 30520444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 200
Target Start/End: Complemental strand, 39507171 - 39507127
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgt 200  Q
    ||||||||||| |||||||| |||||| |||||||||||||||||    
T  39507171 ataataatttatgaaaatgatataattaagtgtaatcataggtgt 39507127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 19230361 - 19230314
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||||||||| ||||||| |||||||||| |||||| |||||||||||    
T  19230361 ataataatttgagaaaataacataattcaatgtaattataggtgtcgt 19230314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 193
Target Start/End: Complemental strand, 51673504 - 51673457
Alignment:
Q  146 gccgacacttataataatttaagaaaatgacataattcagtgtaatca 193  Q
    ||||||||| |||||||||  |||||||||||||||||| ||||||||    
T  51673504 gccgacactgataataattggagaaaatgacataattcattgtaatca 51673457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 14465346 - 14465300
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    |||||||||| |||||||||||||||||| | |||||||| ||||||    
T  14465346 ataataatttgagaaaatgacataattcaatttaatcatatgtgtcg 14465300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 203
Target Start/End: Complemental strand, 16402278 - 16402216
Alignment:
Q  141 gacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||||||||||||  |||||||||| ||||||| |||| || ||||||||| |||| ||||||    
T  16402278 gacatgccgacacggataataatttgagaaaataacatgatacagtgtaattatagctgtcgt 16402216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 17446066 - 17446116
Alignment:
Q  144 atgccgacacttataataatttaagaaaatgacataattcagtgtaatcat 194  Q
    ||||||||||   ||||||||||||||||| |||||||| |||||||||||    
T  17446066 atgccgacaccactaataatttaagaaaatcacataatttagtgtaatcat 17446116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 191
Target Start/End: Original strand, 21945495 - 21945545
Alignment:
Q  141 gacatgccgacacttataataatttaagaaaatgacataattcagtgtaat 191  Q
    |||||||||||||   ||||||||| | |||||||||||||||||||||||    
T  21945495 gacatgccgacacagctaataatttgaaaaaatgacataattcagtgtaat 21945545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 200
Target Start/End: Complemental strand, 46180986 - 46180944
Alignment:
Q  158 aataatttaagaaaatgacataattcagtgtaatcataggtgt 200  Q
    |||||||| ||||||| ||||||||||||||||||||| ||||    
T  46180986 aataatttgagaaaataacataattcagtgtaatcatatgtgt 46180944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 17734964 - 17735024
Alignment:
Q  141 gacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    ||||||||||| |  |||| ||||||| |||||||||||||||| |||||||||| ||||||    
T  17734964 gacatgccgacgcccataacaatttaaaaaaatgacataattca-tgtaatcatatgtgtcg 17735024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 4e-16; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 25544479 - 25544535
Alignment:
Q  147 ccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    ||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  25544479 ccgacacgtataataatttgagaaaatgatataattcagtgtaatcataggtgtcgt 25544535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 10535821 - 10535764
Alignment:
Q  146 gccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    ||||||||  |||||||||| ||||||||||||||||||||||||||||| |||||||    
T  10535821 gccgacaccgataataatttgagaaaatgacataattcagtgtaatcataagtgtcgt 10535764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 24011033 - 24011089
Alignment:
Q  146 gccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    ||||||| | |||||||||| |||||||||||||||| |||||||||||||||||||    
T  24011033 gccgacattgataataatttgagaaaatgacataatttagtgtaatcataggtgtcg 24011089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 4229460 - 4229414
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||    
T  4229460 ataataatttaagagaatgacataattcagtgtaatcatatgtgtcg 4229414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 199
Target Start/End: Original strand, 19573970 - 19574028
Alignment:
Q  141 gacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtg 199  Q
    |||| ||||||||  |||||||||||||||||| ||||||||||||||||| |||||||    
T  19573970 gacacgccgacaccgataataatttaagaaaataacataattcagtgtaattataggtg 19574028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 203
Target Start/End: Complemental strand, 23354719 - 23354657
Alignment:
Q  141 gacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    ||||||| |||||  |||||||||| ||||||||| |||||| ||||||||||||||||||||    
T  23354719 gacatgctgacacagataataatttgagaaaatgatataatttagtgtaatcataggtgtcgt 23354657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 34007043 - 34006997
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||    
T  34007043 ataataatttgagaaattgacataattcagtgtaatcataggtgtcg 34006997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 200
Target Start/End: Original strand, 12748666 - 12748735
Alignment:
Q  131 acacgacaaggacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgt 200  Q
    |||||||| ||||| || ||||   |||||||||| ||||||||||||| ||||||||||||||||||||    
T  12748666 acacgacacggacacgctgacatggataataatttgagaaaatgacatagttcagtgtaatcataggtgt 12748735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 194
Target Start/End: Original strand, 22085004 - 22085049
Alignment:
Q  149 gacacttataataatttaagaaaatgacataattcagtgtaatcat 194  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||    
T  22085004 gacacgtataataatttaagaaaatgacataatttagtgtaatcat 22085049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 11308053 - 11308009
Alignment:
Q  159 ataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    ||||||| | |||||||||||||||||||||||||||||||||||    
T  11308053 ataatttgaaaaaatgacataattcagtgtaatcataggtgtcgt 11308009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 195
Target Start/End: Original strand, 31026702 - 31026741
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcata 195  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  31026702 ataataatttaagaaaatgacataattcaatgtaatcata 31026741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 191
Target Start/End: Complemental strand, 12933795 - 12933753
Alignment:
Q  149 gacacttataataatttaagaaaatgacataattcagtgtaat 191  Q
    |||||| ||||||||||||||||||||||||||||| ||||||    
T  12933795 gacactcataataatttaagaaaatgacataattcaatgtaat 12933753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 194
Target Start/End: Complemental strand, 30298499 - 30298461
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcat 194  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  30298499 ataataatttaataaaatgacataattcagtgtaatcat 30298461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 18570979 - 18571024
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtc 201  Q
    |||||||||| |||||||||||||||||| |||||||||| |||||    
T  18570979 ataataatttgagaaaatgacataattcaatgtaatcatatgtgtc 18571024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 23406875 - 23406920
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtc 201  Q
    |||||||||||||||||| |||||||||||  ||||||||||||||    
T  23406875 ataataatttaagaaaattacataattcagaataatcataggtgtc 23406920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 195
Target Start/End: Complemental strand, 17520119 - 17520083
Alignment:
Q  159 ataatttaagaaaatgacataattcagtgtaatcata 195  Q
    ||||||||||||||| |||||||||||||||||||||    
T  17520119 ataatttaagaaaatcacataattcagtgtaatcata 17520083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 23355062 - 23355002
Alignment:
Q  141 gacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtc 201  Q
    ||||||| |||||  |||||||||| ||||||||| |||||| |||| |||||||||||||    
T  23355062 gacatgctgacacagataataatttgagaaaatgatataatttagtgcaatcataggtgtc 23355002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 191
Target Start/End: Complemental strand, 21782885 - 21782835
Alignment:
Q  141 gacatgccgacacttataataatttaagaaaatgacataattcagtgtaat 191  Q
    |||| |||||||||  ||||||||| ||||||| |||||||||||||||||    
T  21782885 gacacgccgacactgctaataatttgagaaaatcacataattcagtgtaat 21782835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 201
Target Start/End: Original strand, 30394475 - 30394509
Alignment:
Q  167 agaaaatgacataattcagtgtaatcataggtgtc 201  Q
    |||||||||||||||||||| ||||||||||||||    
T  30394475 agaaaatgacataattcagtataatcataggtgtc 30394509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 4332919 - 4332968
Alignment:
Q  142 acatgccgacacttataataatttaagaaaatgacataattcagtgtaat 191  Q
    ||||||||||||| ||||||||||  |||||| |||||||||| ||||||    
T  4332919 acatgccgacactgataataatttgggaaaatcacataattcaatgtaat 4332968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 12668474 - 12668429
Alignment:
Q  157 taataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    ||||||||| | ||||||||||||||||||||||| ||| ||||||    
T  12668474 taataatttgaaaaaatgacataattcagtgtaattataagtgtcg 12668429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 16630802 - 16630839
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatca 193  Q
    ||||||||||||||||||||||||||||| | ||||||    
T  16630802 ataataatttaagaaaatgacataattcaatttaatca 16630839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 18889642 - 18889597
Alignment:
Q  157 taataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    |||||| || ||||||| ||||||||||||||||||||| ||||||    
T  18889642 taataaattgagaaaatcacataattcagtgtaatcatatgtgtcg 18889597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 21616748 - 21616813
Alignment:
Q  135 gacaaggacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgt 200  Q
    |||| ||||| ||||||||   ||||||||| ||||||| ||||||||||||||||| ||| ||||    
T  21616748 gacacggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgt 21616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 37411311 - 37411250
Alignment:
Q  141 gacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    |||||||||||||   ||||||||| ||||||| |||||||||||||| || ||| ||||||    
T  37411311 gacatgccgacaccgctaataatttgagaaaatcacataattcagtgtgattatatgtgtcg 37411250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 44776608 - 44776645
Alignment:
Q  158 aataatttaagaaaatgacataattcagtgtaatcata 195  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  44776608 aataatttatgaaaatgacataactcagtgtaatcata 44776645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 34446572 - 34446619
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||    
T  34446572 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcgt 34446619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 12235571 - 12235524
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||    
T  12235571 ataataattagagaaaatgacataattcagtgtaatcataggtgtcgt 12235524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 6389740 - 6389797
Alignment:
Q  146 gccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    ||||||||  |||||||||| ||||||||| |||||| ||||||||||||||||||||    
T  6389740 gccgacacggataataatttgagaaaatgatataatttagtgtaatcataggtgtcgt 6389797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 19602239 - 19602191
Alignment:
Q  150 acacttataataatttaagaaaatgacataattcagtgtaatcataggt 198  Q
    ||||| |||||||||| ||||||||| ||||||||||||||||||||||    
T  19602239 acactgataataatttgagaaaatgatataattcagtgtaatcataggt 19602191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 112 - 202
Target Start/End: Original strand, 10842494 - 10842585
Alignment:
Q  112 ctatgaagcacggacacgaacac-gacaaggacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    |||||||||||||||||| |||  |||| ||||| ||||||||   ||||||||| | ||||| |||||||| |||||||||||| ||||||    
T  10842494 ctatgaagcacggacacggacattgacacggacacgccgacaccgctaataatttgaaaaaatcacataatttagtgtaatcatatgtgtcg 10842585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 12086397 - 12086350
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||||||    
T  12086397 ataataatttgagataatgacataattcagtttaatcataggtgtcgt 12086350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 203
Target Start/End: Complemental strand, 17168530 - 17168468
Alignment:
Q  141 gacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||| ||| ||||| |||||||||| ||||||||| |||||| |||||||| |||||||||||    
T  17168530 gacacgccaacactgataataatttgagaaaatgatataatttagtgtaataataggtgtcgt 17168468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 2153954 - 2153893
Alignment:
Q  141 gacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    |||| ||||||||  | |||||||||||||||||| |||||| |||||||| ||||||||||    
T  2153954 gacacgccgacacgaacaataatttaagaaaatgatataatttagtgtaattataggtgtcg 2153893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 13364772 - 13364711
Alignment:
Q  141 gacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    ||||||||||||||  | ||||||| ||||||| | ||||||||||||||||||| ||||||    
T  13364772 gacatgccgacactgcttataatttgagaaaatcatataattcagtgtaatcatatgtgtcg 13364711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 200
Target Start/End: Complemental strand, 7569220 - 7569176
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgt 200  Q
    |||||||||| ||||||| ||||||||||||||||| ||||||||    
T  7569220 ataataatttgagaaaattacataattcagtgtaattataggtgt 7569176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 202
Target Start/End: Original strand, 28862083 - 28862175
Alignment:
Q  112 ctatgaagcacggacacgaacac-gacaaggacatgccgacacttataataatttaagaaaatgacat-aattcagtgtaatcataggtgtcg 202  Q
    |||||||||||||||||| |||| ||||  | || |||||||   |||||||||| | |||||||||| ||||||||||||||||| ||||||    
T  28862083 ctatgaagcacggacacggacacagacaccggcacgccgacatcgataataatttgataaaatgacattaattcagtgtaatcatatgtgtcg 28862175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 30781345 - 30781301
Alignment:
Q  157 taataatttaagaaaatgacataattcagtgtaatcataggtgtc 201  Q
    ||||||||| |||||||||||||||| | ||||||||||||||||    
T  30781345 taataatttgagaaaatgacataattaattgtaatcataggtgtc 30781301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 6299519 - 6299566
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||||||||| ||||||||| |||||||| |||||| |||||||||||    
T  6299519 ataataatttgagaaaatgatataattcaatgtaatgataggtgtcgt 6299566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 6306329 - 6306376
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||||||||| ||||||||| |||||||| |||||| |||||||||||    
T  6306329 ataataatttgagaaaatgatataattcaatgtaatgataggtgtcgt 6306376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 26247433 - 26247480
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||||||||||||||||||||||| || ||| ||||||||||| ||||    
T  26247433 ataataatttaagaaaatgacatattttagtataatcataggtttcgt 26247480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 200
Target Start/End: Complemental strand, 32511717 - 32511674
Alignment:
Q  157 taataatttaagaaaatgacataattcagtgtaatcataggtgt 200  Q
    ||||||||||||||||| ||||||||||||||||| ||| ||||    
T  32511717 taataatttaagaaaatcacataattcagtgtaattataagtgt 32511674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 34895092 - 34895041
Alignment:
Q  150 acacttataataatttaagaaaatgacataattcagtgtaatcataggtgtc 201  Q
    |||| ||||||||||| ||||||| | | |||||||||||||||||||||||    
T  34895092 acacctataataatttgagaaaattatacaattcagtgtaatcataggtgtc 34895041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 191
Target Start/End: Complemental strand, 7996445 - 7996395
Alignment:
Q  141 gacatgccgacacttataataatttaagaaaatgacataattcagtgtaat 191  Q
    ||||||||||||||  ||||||||| ||||||| | |||||||||||||||    
T  7996445 gacatgccgacactgctaataatttgagaaaatcatataattcagtgtaat 7996395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 191
Target Start/End: Original strand, 8022356 - 8022406
Alignment:
Q  141 gacatgccgacacttataataatttaagaaaatgacataattcagtgtaat 191  Q
    ||||||||||||||  ||||||||| ||||||| | |||||||||||||||    
T  8022356 gacatgccgacactgctaataatttgagaaaatcatataattcagtgtaat 8022406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 201
Target Start/End: Complemental strand, 9024225 - 9024183
Alignment:
Q  159 ataatttaagaaaatgacataattcagtgtaatcataggtgtc 201  Q
    ||||||| |||||||||||||||||| |||||||||| |||||    
T  9024225 ataatttgagaaaatgacataattcaatgtaatcatatgtgtc 9024183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 9195814 - 9195760
Alignment:
Q  148 cgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    |||||||  ||||||||| |||||||||||||||| |||||||| ||| ||||||    
T  9195814 cgacactcctaataatttgagaaaatgacataatttagtgtaattatatgtgtcg 9195760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 191
Target Start/End: Original strand, 9658887 - 9658921
Alignment:
Q  157 taataatttaagaaaatgacataattcagtgtaat 191  Q
    ||||||||||||||||| |||||||||||||||||    
T  9658887 taataatttaagaaaatcacataattcagtgtaat 9658921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 18252831 - 18252757
Alignment:
Q  128 cgaacacgacaaggacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    |||||||||||  ||||  |||| ||  |||||||||||| |||||||||||||| |||||||| | ||||||||    
T  18252831 cgaacacgacacagacactccgataccgataataatttaaaaaaatgacataatttagtgtaattacaggtgtcg 18252757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 26562680 - 26562742
Alignment:
Q  140 ggacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    ||||| |||||||||  ||| ||||| ||||||| ||||||||||||||||| ||| ||||||    
T  26562680 ggacacgccgacactgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcg 26562742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 7265644 - 7265599
Alignment:
Q  157 taataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    ||||||||| ||||||| ||||||||||||||||| ||| ||||||    
T  7265644 taataatttgagaaaatcacataattcagtgtaattatatgtgtcg 7265599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 9025545 - 9025500
Alignment:
Q  157 taataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    ||||||||| ||||||| ||||||||||||||||| ||| ||||||    
T  9025545 taataatttgagaaaatcacataattcagtgtaattatatgtgtcg 9025500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 26178748 - 26178687
Alignment:
Q  141 gacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    |||| |||| ||||| ||||||||| | ||||| |||||||| |||||||||||| ||||||    
T  26178748 gacaagccgtcacttctaataatttgataaaatcacataatttagtgtaatcatatgtgtcg 26178687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 12278836 - 12278889
Alignment:
Q  150 acacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||| |||||||    
T  12278836 acactgataataatttaagaaaatgacataattcagtgtaattatatgtgtcgt 12278889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 124 - 203
Target Start/End: Complemental strand, 29812746 - 29812669
Alignment:
Q  124 gacacgaacacgacaaggacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||||| |||||||| |||||  ||||| | ||||||||||| ||||||||| |||||| ||||||||||||||||||||    
T  29812746 gacacggacacgacacggaca--ccgacccgtataataatttgagaaaatgatataatttagtgtaatcataggtgtcgt 29812669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 203
Target Start/End: Complemental strand, 38804622 - 38804560
Alignment:
Q  141 gacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||| ||||||||  |||||||||| ||||||||||||||| ||| |||||||||||||||||    
T  38804622 gacacgccgacacggataataatttcagaaaatgacataatccagggtaatcataggtgtcgt 38804560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 7133327 - 7133287
Alignment:
Q  159 ataatttaagaaaatgacataattcagtgtaatcataggtg 199  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  7133327 ataatttgagaaaatgacataattcagtgtaatcataggtg 7133287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 200
Target Start/End: Original strand, 23930230 - 23930270
Alignment:
Q  160 taatttaagaaaatgacataattcagtgtaatcataggtgt 200  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  23930230 taatttgagaaaatgacataattcagtgtaatcataggtgt 23930270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 17780136 - 17780089
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    ||||||||||||||||||||||||||||  |||||| |||||||||||    
T  17780136 ataataatttaagaaaatgacataattctatgtaataataggtgtcgt 17780089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 38134479 - 38134412
Alignment:
Q  135 gacaaggacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    |||| |||||||  |||||  |||||||||| |||||||||||||||||| |||||||||| ||||||    
T  38134479 gacatggacatgttgacaccgataataatttgagaaaatgacataattcaatgtaatcatatgtgtcg 38134412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 202
Target Start/End: Complemental strand, 18233646 - 18233604
Alignment:
Q  160 taatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    |||||| ||||||||||||||||||||||||| ||||||||||    
T  18233646 taatttgagaaaatgacataattcagtgtaattataggtgtcg 18233604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 203
Target Start/End: Original strand, 43249985 - 43250047
Alignment:
Q  141 gacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||| ||||||||  |||||||||| ||||||||||||||| ||||||||| ||| |||||||    
T  43249985 gacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgt 43250047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 201
Target Start/End: Original strand, 4909126 - 4909203
Alignment:
Q  124 gacacgaacacgacaaggacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtc 201  Q
    ||||||||||| ||| ||||| |  |||||  |||||||||| ||||||| |||||||||| |||||||||| |||||    
T  4909126 gacacgaacacaacacggacaggttgacaccaataataatttgagaaaattacataattcattgtaatcatatgtgtc 4909203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 27732290 - 27732245
Alignment:
Q  157 taataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    ||||||||||||||||| ||||||||||||||||| ||| ||||||    
T  27732290 taataatttaagaaaattacataattcagtgtaattatatgtgtcg 27732245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 3801284 - 3801213
Alignment:
Q  129 gaacacgacaaggacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgt 200  Q
    |||||| ||| |||||  |||||||  |||||||||||||||||| ||||||||||  ||||||||| ||||    
T  3801284 gaacacaacagggacacaccgacacaaataataatttaagaaaataacataattcaaggtaatcataagtgt 3801213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 22683807 - 22683760
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||||||||| |||| |||| ||||||||||| |||||||||||||||    
T  22683807 ataataatttgagaatatgatataattcagtgcaatcataggtgtcgt 22683760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 23751907 - 23751954
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||||||||| | ||||||| |||||| ||||||||||||||||||||    
T  23751907 ataataatttgataaaatgatataatttagtgtaatcataggtgtcgt 23751954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 202
Target Start/End: Complemental strand, 3554594 - 3554512
Alignment:
Q  120 cacggacacgaacacgacaaggacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    |||||||||  ||||||||  |||| ||||||||  || ||||||||||||||| |||||||| | |||||| |||| |||||    
T  3554594 cacggacaccgacacgacacagacacgccgacaccaatgataatttaagaaaattacataatttaatgtaattatagatgtcg 3554512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 203
Target Start/End: Complemental strand, 4017861 - 4017799
Alignment:
Q  141 gacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||| ||||||||  |||||||||| |||||| || |||||| |||||||||||| |||||||    
T  4017861 gacacgccgacacggataataatttgagaaaacgatataatttagtgtaatcataagtgtcgt 4017799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 200
Target Start/End: Complemental strand, 36314685 - 36314635
Alignment:
Q  150 acacttataataatttaagaaaatgacataattcagtgtaatcataggtgt 200  Q
    ||||| |||||||||| ||||||||||||| |||| |||||||||| ||||    
T  36314685 acactcataataatttgagaaaatgacatatttcaatgtaatcatatgtgt 36314635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 15902814 - 15902875
Alignment:
Q  141 gacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    |||||||||||||  |||||||||| | ||||| |||||||| |||||||| ||| ||||||    
T  15902814 gacatgccgacaccaataataatttgataaaatcacataatttagtgtaattatatgtgtcg 15902875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 21141033 - 21140988
Alignment:
Q  157 taataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    ||||||||||||||||| | |||||||||||| || ||||||||||    
T  21141033 taataatttaagaaaatcatataattcagtgtgattataggtgtcg 21140988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 44172942 - 44172905
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatca 193  Q
    |||||||||| |||||||||||||||||| ||||||||    
T  44172942 ataataatttgagaaaatgacataattcaatgtaatca 44172905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 124 - 200
Target Start/End: Original strand, 99868 - 99944
Alignment:
Q  124 gacacgaacacgacaaggacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgt 200  Q
    ||||||||||||||| ||||||| ||||||  |||||||||| ||||||| |||||||||| |||||| ||| ||||    
T  99868 gacacgaacacgacacggacatgtcgacaccgataataattttagaaaataacataattcaatgtaattatatgtgt 99944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 28883945 - 28883885
Alignment:
Q  141 gacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtc 201  Q
    ||||||||| |||  |||||||||| ||||||||||||||||||||| |||||||||||||    
T  28883945 gacatgccgccacgaataataatttgagaaaatgacataattcagtggaatcataggtgtc 28883885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 4786418 - 4786344
Alignment:
Q  128 cgaacacgacaaggacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    |||||||||||  |||| ||||||||   ||||||||||||||||| ||||||||||||||||| ||| ||||||    
T  4786418 cgaacacgacactgacacgccgacaccattaataatttaagaaaatcacataattcagtgtaattatatgtgtcg 4786344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 203
Target Start/End: Original strand, 40063935 - 40064005
Alignment:
Q  131 acacgacaaggacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||||||| |||||  |||||||  |||||||||| |||||||||||||||||| |||||||||||| |||||    
T  40063935 acacgacacggaca--ccgacaccaataataatttgagaaaatgacataattcattgtaatcataggcgtcgt 40064005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 203
Target Start/End: Original strand, 39820435 - 39820483
Alignment:
Q  155 tataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    ||||||||||| ||||||||| |||||| ||||||||||||||||||||    
T  39820435 tataataatttgagaaaatgatataatttagtgtaatcataggtgtcgt 39820483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 35431192 - 35431145
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||||||||| ||||||||||||| || ||||||||||||||||||||    
T  35431192 ataataatttgagaaaatgacatattttagtgtaatcataggtgtcgt 35431145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 33382071 - 33382025
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    |||||||||||||||||||||||||||||| ||||| ||| ||||||    
T  33382071 ataataatttaagaaaatgacataattcagagtaattatatgtgtcg 33382025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 203
Target Start/End: Original strand, 44067508 - 44067570
Alignment:
Q  141 gacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||| ||||||||  |||||||||| ||||||||||||||| ||||||||| ||| |||||||    
T  44067508 gacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgt 44067570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 16869765 - 16869720
Alignment:
Q  158 aataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    ||||||||||||||||||||||||||| | ||||||| ||||||||    
T  16869765 aataatttaagaaaatgacataattcactataatcattggtgtcgt 16869720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 31580178 - 31580133
Alignment:
Q  157 taataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    ||||||||||||||||| |||||||| |||||||| ||||||||||    
T  31580178 taataatttaagaaaatcacataattgagtgtaattataggtgtcg 31580133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 3025559 - 3025603
Alignment:
Q  157 taataatttaagaaaatgacataattcagtgtaatcataggtgtc 201  Q
    ||||||||| ||||||| ||||||||||||||||| |||||||||    
T  3025559 taataatttgagaaaatcacataattcagtgtaattataggtgtc 3025603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 13845232 - 13845288
Alignment:
Q  147 ccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||||||  |||||||||| ||||||||| |||||| || |||||||||||||||||    
T  13845232 ccgacacaaataataatttgagaaaatgatataatttagagtaatcataggtgtcgt 13845288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 191
Target Start/End: Original strand, 14134661 - 14134741
Alignment:
Q  112 ctatgaagcacggacacgaacac-gacaaggacatgccgacacttataataatttaagaaaatgacataattcagtgtaat 191  Q
    |||||||||||||| ||| |||| |||| ||||| | ||||| |  ||||||||| ||||||| |||||||||||||||||    
T  14134661 ctatgaagcacggatacggacaccgacacggacacgtcgacaatactaataatttgagaaaatcacataattcagtgtaat 14134741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 1676719 - 1676766
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    ||||||||||  |||||||||||| || ||||||||||||||||||||    
T  1676719 ataataatttgtgaaaatgacatattttagtgtaatcataggtgtcgt 1676766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 200
Target Start/End: Original strand, 11803267 - 11803310
Alignment:
Q  157 taataatttaagaaaatgacataattcagtgtaatcataggtgt 200  Q
    ||||||||||||||||| ||||||||||||||||| ||| ||||    
T  11803267 taataatttaagaaaatcacataattcagtgtaattatatgtgt 11803310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 12985387 - 12985438
Alignment:
Q  144 atgccgacacttataataatttaagaaaatgacataattcagtgtaatcata 195  Q
    |||| ||||| ||||||||||| ||||||| |||||||||| ||||||||||    
T  12985387 atgcagacacctataataatttgagaaaatcacataattcaatgtaatcata 12985438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 199
Target Start/End: Complemental strand, 30068080 - 30068037
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtg 199  Q
    |||||||||| |||||||||||||||||||| ||||| ||||||    
T  30068080 ataataatttgagaaaatgacataattcagtataatcgtaggtg 30068037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 2035737 - 2035795
Alignment:
Q  147 ccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcgtat 205  Q
    |||||||  |||| |||||| |||||| |||| |||||||||||| |||||||||||||    
T  2035737 ccgacaccgataacaatttaggaaaataacattattcagtgtaattataggtgtcgtat 2035795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 12559157 - 12559119
Alignment:
Q  157 taataatttaagaaaatgacataattcagtgtaatcata 195  Q
    ||||||||| ||||||||| |||||||||||||||||||    
T  12559157 taataatttgagaaaatgatataattcagtgtaatcata 12559119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 196
Target Start/End: Original strand, 26507441 - 26507487
Alignment:
Q  150 acacttataataatttaagaaaatgacataattcagtgtaatcatag 196  Q
    |||||||| ||||||||||||||| | |||||| |||||||||||||    
T  26507441 acacttatgataatttaagaaaataatataattaagtgtaatcatag 26507487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 29198530 - 29198492
Alignment:
Q  157 taataatttaagaaaatgacataattcagtgtaatcata 195  Q
    ||||||||| |||||||||||||||||| ||||||||||    
T  29198530 taataatttgagaaaatgacataattcaatgtaatcata 29198492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 191
Target Start/End: Complemental strand, 34201105 - 34201063
Alignment:
Q  149 gacacttataataatttaagaaaatgacataattcagtgtaat 191  Q
    |||||| |||||||||| |||||||||||||||||| ||||||    
T  34201105 gacactaataataatttgagaaaatgacataattcaatgtaat 34201063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 182
Target Start/End: Complemental strand, 24758579 - 24758546
Alignment:
Q  149 gacacttataataatttaagaaaatgacataatt 182  Q
    |||||||||| |||||||||||||||||||||||    
T  24758579 gacacttatagtaatttaagaaaatgacataatt 24758546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 202
Target Start/End: Original strand, 34897093 - 34897138
Alignment:
Q  157 taataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    ||||||||| ||||||| ||||||||||||||||| ||| ||||||    
T  34897093 taataatttgagaaaatcacataattcagtgtaattatatgtgtcg 34897138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 43554520 - 43554575
Alignment:
Q  148 cgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||||| ||||||||||| ||||||||| |||||| ||||||||||||||||||||    
T  43554520 cgacacgtataataatttgagaaaatgatataatttagtgtaatcataggtgtcgt 43554575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 203
Target Start/End: Original strand, 31264446 - 31264492
Alignment:
Q  157 taataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||    
T  31264446 taataatttgagaaaatgacataattcagtgtaatcataagtgtcgt 31264492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 203
Target Start/End: Complemental strand, 26205801 - 26205765
Alignment:
Q  167 agaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||||||||||||||||||||||||||||||||||||    
T  26205801 agaaaatgacataattcagtgtaatcataggtgtcgt 26205765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 191
Target Start/End: Original strand, 18162062 - 18162097
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaat 191  Q
    ||||||||||||||||||||||||||||||||||||    
T  18162062 ataataatttaagaaaatgacataattcagtgtaat 18162097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 18607149 - 18607102
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||||||||| ||||||| |||||||||| ||||||||||||||||||    
T  18607149 ataataatttgagaaaataacataattcaatgtaatcataggtgtcgt 18607102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 202
Target Start/End: Original strand, 3966467 - 3966556
Alignment:
Q  115 tgaagcacggacacgaacac--gacaaggacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    ||||||||||||||| ||||  ||||  |||||||||||||   ||||||||| ||||||| ||| ||||||||||||| ||| ||||||    
T  3966467 tgaagcacggacacggacactggacactgacatgccgacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcg 3966556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 200
Target Start/End: Original strand, 28296310 - 28296379
Alignment:
Q  131 acacgacaaggacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgt 200  Q
    |||||||| ||||| | ||||||  |||||||||| |||||||||||||||||| |||| ||||| ||||    
T  28296310 acacgacatggacaagtcgacaccgataataatttgagaaaatgacataattcaatgtactcatatgtgt 28296379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 28588725 - 28588680
Alignment:
Q  157 taataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    ||||||||| ||||||| ||||||||||||||||| ||||||||||    
T  28588725 taataatttgagaaaatcacataattcagtgtaattataggtgtcg 28588680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 39696049 - 39696004
Alignment:
Q  158 aataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||||||| ||||||||| |||||| ||||||||||||||||||||    
T  39696049 aataatttgagaaaatgatataatttagtgtaatcataggtgtcgt 39696004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 42469213 - 42469270
Alignment:
Q  141 gacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggt 198  Q
    |||| ||||||||  |||||||||| ||||||||||||| || |||||||||||||||    
T  42469213 gacacgccgacacggataataatttgagaaaatgacatattttagtgtaatcataggt 42469270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 2577241 - 2577193
Alignment:
Q  147 ccgacacttataataatttaagaaaatgacataattcagtgtaatcata 195  Q
    |||||||  |||||||||| |||||||||||||||| ||||||||||||    
T  2577241 ccgacaccgataataatttgagaaaatgacataatttagtgtaatcata 2577193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 200
Target Start/End: Complemental strand, 19293475 - 19293431
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgt 200  Q
    |||||||||||||||||| |||||||| |||||||||||| ||||    
T  19293475 ataataatttaagaaaataacataattaagtgtaatcatatgtgt 19293431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 203
Target Start/End: Original strand, 25863210 - 25863258
Alignment:
Q  155 tataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    ||||||||||| ||||||||| ||||||||||||||| ||| |||||||    
T  25863210 tataataatttgagaaaatgatataattcagtgtaattataagtgtcgt 25863258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 191
Target Start/End: Original strand, 43001762 - 43001842
Alignment:
Q  112 ctatgaagcacggacacgaacacg-acaaggacatgccgacacttataataatttaagaaaatgacataattcagtgtaat 191  Q
    |||||||||||||| ||| ||||| |||  |||||| |||||||  ||||||||| | ||||| |||||||||||||||||    
T  43001762 ctatgaagcacggatacggacacggacactgacatgtcgacactgctaataatttgaaaaaattacataattcagtgtaat 43001842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 5468030 - 5467983
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||||||||| | ||||| ||||||||||||||||| |||||||||||    
T  5468030 ataataatttgataaaatcacataattcagtgtaattataggtgtcgt 5467983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 202
Target Start/End: Original strand, 2548394 - 2548440
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    |||||||||  ||||||| ||||||||||||||||||||| ||||||    
T  2548394 ataataattagagaaaattacataattcagtgtaatcataagtgtcg 2548440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 194
Target Start/End: Original strand, 4344749 - 4344787
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcat 194  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  4344749 ataataatttgaaaaaatgacataattcagtgtaatcat 4344787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 194
Target Start/End: Complemental strand, 11596507 - 11596469
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcat 194  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  11596507 ataataatttgagaaaatgacataattcaatgtaatcat 11596469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 17925224 - 17925178
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    |||||||||||||||||| |||||||||| |||||| ||| ||||||    
T  17925224 ataataatttaagaaaatcacataattcaatgtaataatatgtgtcg 17925178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 203
Target Start/End: Original strand, 21137697 - 21137743
Alignment:
Q  157 taataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    ||||||| | |||||||||| |||||||||| |||||||||||||||    
T  21137697 taataatctgagaaaatgacgtaattcagtgaaatcataggtgtcgt 21137743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 194
Target Start/End: Original strand, 2419857 - 2419902
Alignment:
Q  149 gacacttataataatttaagaaaatgacataattcagtgtaatcat 194  Q
    |||||| |||||||||| ||||||| ||| ||||||||||||||||    
T  2419857 gacactgataataatttgagaaaattacacaattcagtgtaatcat 2419902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 202
Target Start/End: Original strand, 11685911 - 11685992
Alignment:
Q  121 acggacacgaacacgacaaggacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    ||||||||| ||||||||  |||||||||||||   ||||||||| ||||| |  ||||||| |||||||| ||| ||||||    
T  11685911 acggacacggacacgacactgacatgccgacaccgctaataatttgagaaagtcgcataatttagtgtaattatatgtgtcg 11685992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 18288103 - 18288058
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtc 201  Q
    |||||||||| |||||||||| ||| ||||| ||||||||||||||    
T  18288103 ataataatttgagaaaatgacttaactcagtataatcataggtgtc 18288058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 190
Target Start/End: Original strand, 19429396 - 19429473
Alignment:
Q  113 tatgaagcacggacacgaacacgacaaggacatgccgacacttataataatttaagaaaatgacataattcagtgtaa 190  Q
    ||||||||||  ||||| ||||||||  |||||||||||| |  ||||||||| ||||||| |||||| | |||||||    
T  19429396 tatgaagcacatacacggacacgacattgacatgccgacaatgttaataatttgagaaaatcacataacttagtgtaa 19429473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 23016040 - 23015995
Alignment:
Q  157 taataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    |||| |||| ||||||| ||||||||||||||||| ||||||||||    
T  23016040 taatcatttgagaaaatcacataattcagtgtaattataggtgtcg 23015995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000002; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 7988511 - 7988459
Alignment:
Q  148 cgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgt 200  Q
    ||||||| |||||||||||||||| |||||||||||| |||||||||| ||||    
T  7988511 cgacactgataataatttaagaaagtgacataattcaatgtaatcataagtgt 7988459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 39101243 - 39101187
Alignment:
Q  147 ccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    ||||||| ||||||||||| ||||||| |||||||| |||||||| |||||||||||    
T  39101243 ccgacacatataataatttgagaaaataacataattaagtgtaattataggtgtcgt 39101187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 200
Target Start/End: Complemental strand, 42004999 - 42004955
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgt 200  Q
    |||||||||| |||||||||||||||| |||||||||||||||||    
T  42004999 ataataatttgagaaaatgacataatttagtgtaatcataggtgt 42004955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 6936452 - 6936405
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||||||| | |||||||||||||||| ||||||||||||||||||||    
T  6936452 ataataatctgagaaaatgacataattaagtgtaatcataggtgtcgt 6936405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 202
Target Start/End: Original strand, 19637775 - 19637821
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    ||||||||||||||||||||||| ||||| |||||||||| ||||||    
T  19637775 ataataatttaagaaaatgacattattcaatgtaatcatatgtgtcg 19637821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 21038091 - 21038129
Alignment:
Q  157 taataatttaagaaaatgacataattcagtgtaatcata 195  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  21038091 taataatttaagaaaattacataattcagtgtaatcata 21038129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 201
Target Start/End: Complemental strand, 40747834 - 40747780
Alignment:
Q  147 ccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtc 201  Q
    |||||||  |||||||||| |||||||||||||||||| |||||| |||||||||    
T  40747834 ccgacacggataataatttgagaaaatgacataattcaatgtaattataggtgtc 40747780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 15641097 - 15641048
Alignment:
Q  141 gacatgccgacacttataataatttaagaaaatgacataattcagtgtaa 190  Q
    ||||||||||||||  ||||||||||||||||| |||| |||||||||||    
T  15641097 gacatgccgacactgctaataatttaagaaaatcacatgattcagtgtaa 15641048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 200
Target Start/End: Complemental strand, 25098632 - 25098563
Alignment:
Q  131 acacgacaaggacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgt 200  Q
    |||||||||||||| ||||||||   | ||||||| ||||||| ||||||||||||||||| ||| ||||    
T  25098632 acacgacaaggacaagccgacaccgctgataatttgagaaaatcacataattcagtgtaattatatgtgt 25098563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 202
Target Start/End: Original strand, 36878469 - 36878514
Alignment:
Q  157 taataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    ||||||||| ||||||| ||||||||||||||||| ||||||||||    
T  36878469 taataatttgagaaaatcacataattcagtgtaattataggtgtcg 36878514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 21145473 - 21145521
Alignment:
Q  156 ataataattt-aagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||||||||| || ||||||||||||||||||||||||||||| |||||    
T  21145473 ataataatttgaaaaaaatgacataattcagtgtaatcataggcgtcgt 21145521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 30847787 - 30847727
Alignment:
Q  141 gacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtc 201  Q
    ||||||| ||||||  ||||||||| | |||||||||||||||| |||||||||| |||||    
T  30847787 gacatgctgacactgctaataatttgaaaaaatgacataattcaatgtaatcatatgtgtc 30847727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 22794130 - 22794083
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||||||||| | ||||||||||||| ||||||||| |||||||||||    
T  22794130 ataataatttgaaaaaatgacataatacagtgtaattataggtgtcgt 22794083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 38076047 - 38075976
Alignment:
Q  131 acacgacaaggacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    |||||||| ||||| | |||||||  ||||||||| || |||| |||||| |||||||||||||| ||||||    
T  38076047 acacgacacggacacgacgacactgctaataatttgagtaaatcacataagtcagtgtaatcatatgtgtcg 38075976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 191
Target Start/End: Original strand, 51409996 - 51410067
Alignment:
Q  121 acggacacgaacacgacaaggacatgccgacacttataataattt-aagaaaatgacataattcagtgtaat 191  Q
    ||||||||| |||| | | |||||||||||||| | ||||||||| || ||||| |||||||||||||||||    
T  51409996 acggacacggacacaaaacggacatgccgacacatctaataatttgaaaaaaatcacataattcagtgtaat 51410067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 194
Target Start/End: Original strand, 3921674 - 3921712
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcat 194  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  3921674 ataataatttgagaaaatgacataattcaatgtaatcat 3921712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 191
Target Start/End: Complemental strand, 5376551 - 5376517
Alignment:
Q  157 taataatttaagaaaatgacataattcagtgtaat 191  Q
    ||||||||||||||||| |||||||||||||||||    
T  5376551 taataatttaagaaaataacataattcagtgtaat 5376517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 11412820 - 11412774
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    |||||||| | |||||||||||||||||| ||| |||||||||||||    
T  11412820 ataataatatgagaaaatgacataattcaatgtgatcataggtgtcg 11412774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 12040734 - 12040688
Alignment:
Q  157 taataatttaagaaaatgacataa-ttcagtgtaatcataggtgtcg 202  Q
    ||||||||||||||||||| |||| |||||| |||||||||||||||    
T  12040734 taataatttaagaaaatgatataatttcagtataatcataggtgtcg 12040688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 13436455 - 13436509
Alignment:
Q  146 gccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgt 200  Q
    |||||||||  |||||||||||| |||| ||||||||||||||||| ||| ||||    
T  13436455 gccgacactgctaataatttaaggaaatcacataattcagtgtaattatatgtgt 13436509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 203
Target Start/End: Complemental strand, 17831582 - 17831536
Alignment:
Q  157 taataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    ||||||||| ||||||| |||| |||||||||||||||| |||||||    
T  17831582 taataatttgagaaaatcacattattcagtgtaatcatatgtgtcgt 17831536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 24176419 - 24176373
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    |||||||||| ||||||| |||| |||||||||||| ||||||||||    
T  24176419 ataataatttgagaaaataacatcattcagtgtaattataggtgtcg 24176373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 26462705 - 26462651
Alignment:
Q  148 cgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    ||||||| |||||||||||||||||||| |||||| | |||||||| | ||||||    
T  26462705 cgacactgataataatttaagaaaatgaaataattgaatgtaatcacatgtgtcg 26462651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 190
Target Start/End: Original strand, 42325567 - 42325601
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaa 190  Q
    |||||||||| ||||||||||||||||||||||||    
T  42325567 ataataatttgagaaaatgacataattcagtgtaa 42325601  T

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Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 1864931 - 1864886
Alignment:
Q  157 taataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    ||||||||| ||||||| ||||||||||||||||| ||| ||||||    
T  1864931 taataatttgagaaaatcacataattcagtgtaattatatgtgtcg 1864886  T

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Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 20157401 - 20157356
Alignment:
Q  157 taataatttaagaaaatgacataattcagtgtaatcataggtgtcg 202  Q
    ||||||| | ||||||| ||||||||||||||||||||| ||||||    
T  20157401 taataatgtgagaaaatcacataattcagtgtaatcatatgtgtcg 20157356  T

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Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 185
Target Start/End: Original strand, 29415755 - 29415784
Alignment:
Q  156 ataataatttaagaaaatgacataattcag 185  Q
    ||||||||||||||||||||||||||||||    
T  29415755 ataataatttaagaaaatgacataattcag 29415784  T

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Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 48415799 - 48415730
Alignment:
Q  135 gacaaggacatgccgacacttataataattt-aagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    ||||| |||| ||||||||  |||||||||| || ||||||| |||||| ||||||||||||| ||||||    
T  48415799 gacaacgacacgccgacacggataataattttaaaaaaatgatataatttagtgtaatcatagatgtcgt 48415730  T

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Target: scaffold0598 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 8105 - 8058
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  8105 ataataatttgagaaaatgacataattcagtgtaaacataggtatcgt 8058  T

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Target: scaffold0778 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0778
Description:

Target: scaffold0778; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 4413 - 4460
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    ||||||||||||||| |||| |||||||||||| ||||||| ||||||    
T  4413 ataataatttaagaatatgatataattcagtgtcatcatagatgtcgt 4460  T

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Target: scaffold0199 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 1956 - 2003
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    ||||||||||  |||||||||||| || ||||||||||||||||||||    
T  1956 ataataatttgtgaaaatgacatattttagtgtaatcataggtgtcgt 2003  T

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Target: scaffold0049 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 201
Target Start/End: Original strand, 56932 - 56974
Alignment:
Q  159 ataatttaagaaaatgacataattcagtgtaatcataggtgtc 201  Q
    ||||||| ||||||||| ||||||||||||||||||| |||||    
T  56932 ataatttgagaaaatgatataattcagtgtaatcataagtgtc 56974  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 203
Target Start/End: Complemental strand, 225335 - 225273
Alignment:
Q  141 gacatgccgacacttataataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 203  Q
    |||| ||||||||  |||||||||| ||||||||||||||| || |||||| ||| |||||||    
T  225335 gacacgccgacacagataataatttgagaaaatgacataatacaatgtaattataagtgtcgt 225273  T

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Target: scaffold0085 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 26005 - 26050
Alignment:
Q  156 ataataatttaagaaaatgacataattcagtgtaatcataggtgtc 201  Q
    |||||||| | |||||||||||| |||||||| |||||||||||||    
T  26005 ataataatgtgagaaaatgacatgattcagtgcaatcataggtgtc 26050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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