View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0025-Insertion-6 (Length: 505)
Name: NF0025-Insertion-6
Description: NF0025
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0025-Insertion-6 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 474; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 474; E-Value: 0
Query Start/End: Original strand, 8 - 505
Target Start/End: Original strand, 7647557 - 7648054
Alignment:
| Q |
8 |
ggctagtcatgtgccgttgtacctaaacgccatttgattgcttaactcaaataaataaacaagtgtaattctccaaggaccaaaataataagaatatttt |
107 |
Q |
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| T |
7647557 |
ggctagtcatgtgccgttgtacctaaacgccatttgattgcttaactcaaataaataaacaagtgtaattctccaaggagcaaaataatatgaatatttt |
7647656 |
T |
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| Q |
108 |
ttgttttaacaaaagtaaaattttgatctttaaatgttgtgagccattgtcattagtcggtaaatatgtcgaaattgcaaaaatatagttaaacgactct |
207 |
Q |
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| T |
7647657 |
ttgttttaacaaaagtaaaattttgatctttaaatgttgtgagccattgtcattagtcggtaaatatgtcgaaattgcaaaaatatagttaaacgactct |
7647756 |
T |
|
| Q |
208 |
tttgtttcgttgatcaataataatgattaactaaagataaaattagatatatttttataaatattgtgatactctaatagctgtttattcgaaccaaaag |
307 |
Q |
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| T |
7647757 |
tttgtttcgttgatcaataataatgattaactaaagataaaattagatatatttttataaatattgtgataatctaatagctgtttattcgaaccaaaag |
7647856 |
T |
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| Q |
308 |
tagtaagaagtggttagcaaattctacgtgcttttctaattatgattgtgacgttttgctttcattgagatgctaatgctaccaaaaaggaaatgaggaa |
407 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7647857 |
tagtaagaagtggttagcaaattctacgtgcttttctaattatgattgtgacgttttgctttcattgagatgctaatgctaccaaaaaggaaatgaggaa |
7647956 |
T |
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| Q |
408 |
tccaatgtaagataagattacatttgatttacaaagtcgctgaattttataagttttattgaaattatgttttgaacacacgttttctctttttagaa |
505 |
Q |
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| T |
7647957 |
tccaatgtaagataagattacatttaatttacaaagtcactgaattttataagttttattgaaattatgttttgtacacacgttttctctttttagaa |
7648054 |
T |
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