View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0028-INSERTION-5 (Length: 149)
Name: NF0028-INSERTION-5
Description: NF0028
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0028-INSERTION-5 |
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Alignment Details
Target: chr5 (Bit Score: 129; Significance: 4e-67; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 129; E-Value: 4e-67
Query Start/End: Original strand, 8 - 136
Target Start/End: Original strand, 42700896 - 42701024
Alignment:
| Q |
8 |
cattattgattctacaatgcaggcatcagagcagcatagaagttcaagtatgtactatcaaccattgcagcaaatcgaagcctattgcttgccacaatat |
107 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42700896 |
cattattgattctacaatgcaggcatcagagcagcatagaagttcaagtatgtactatcaaccattgcagcaaatcgaagcctattgcttgccacaatat |
42700995 |
T |
|
| Q |
108 |
cgaaatctaaatcatcagctatacaacaa |
136 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
42700996 |
cgaaatctaaatcatcagctatacaacaa |
42701024 |
T |
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