View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0028-INSERTION-9 (Length: 268)

Name: NF0028-INSERTION-9
Description: NF0028
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0028-INSERTION-9
NF0028-INSERTION-9
[»] chr1 (41 HSPs)
chr1 (8-200)||(49273951-49274143)
chr1 (9-200)||(49268215-49268405)
chr1 (8-200)||(49255490-49255681)
chr1 (29-192)||(49273259-49273421)
chr1 (201-260)||(40257403-40257462)
chr1 (201-253)||(9165215-9165267)
chr1 (201-253)||(19528347-19528399)
chr1 (201-253)||(33700793-33700845)
chr1 (201-253)||(41508835-41508887)
chr1 (209-260)||(1690090-1690141)
chr1 (201-268)||(17745261-17745328)
chr1 (201-260)||(26232399-26232458)
chr1 (201-268)||(30689016-30689083)
chr1 (208-254)||(52336793-52336839)
chr1 (208-253)||(8177202-8177247)
chr1 (207-260)||(9879448-9879501)
chr1 (201-242)||(37310007-37310048)
chr1 (204-261)||(42983386-42983443)
chr1 (204-253)||(52116801-52116850)
chr1 (204-260)||(9117126-9117182)
chr1 (201-253)||(9964442-9964494)
chr1 (201-253)||(15786340-15786392)
chr1 (201-253)||(31794284-31794336)
chr1 (201-253)||(36371474-36371526)
chr1 (201-248)||(15581166-15581213)
chr1 (201-248)||(24730388-24730435)
chr1 (202-253)||(42412700-42412750)
chr1 (201-248)||(44126399-44126446)
chr1 (207-253)||(6650605-6650651)
chr1 (204-242)||(17410238-17410276)
chr1 (201-242)||(16170009-16170050)
chr1 (202-259)||(21547494-21547551)
chr1 (204-253)||(51703786-51703835)
chr1 (201-253)||(952515-952567)
chr1 (201-253)||(4566552-4566604)
chr1 (200-260)||(9224778-9224838)
chr1 (201-260)||(18459244-18459304)
chr1 (216-260)||(31383811-31383855)
chr1 (217-253)||(44046168-44046204)
chr1 (201-260)||(50901585-50901645)
chr1 (201-253)||(51814498-51814550)
[»] chr3 (40 HSPs)
chr3 (17-200)||(29356746-29356928)
chr3 (201-260)||(10499122-10499181)
chr3 (204-260)||(2667869-2667925)
chr3 (204-260)||(16991549-16991605)
chr3 (201-260)||(31520618-31520677)
chr3 (201-259)||(31788984-31789042)
chr3 (201-259)||(36720385-36720443)
chr3 (201-253)||(4222145-4222197)
chr3 (204-260)||(4844524-4844580)
chr3 (204-260)||(4870220-4870276)
chr3 (201-253)||(46518632-46518684)
chr3 (201-260)||(2597233-2597292)
chr3 (201-260)||(5499420-5499479)
chr3 (201-260)||(8051218-8051277)
chr3 (201-259)||(203094-203152)
chr3 (201-242)||(9832501-9832542)
chr3 (204-253)||(14339617-14339666)
chr3 (204-253)||(17554778-17554827)
chr3 (201-253)||(28928899-28928951)
chr3 (205-253)||(30311314-30311362)
chr3 (205-253)||(51903898-51903946)
chr3 (205-260)||(11612307-11612362)
chr3 (201-248)||(42799772-42799819)
chr3 (207-253)||(7975428-7975474)
chr3 (201-231)||(24459994-24460024)
chr3 (201-242)||(26871535-26871576)
chr3 (208-253)||(32651458-32651503)
chr3 (219-268)||(47279409-47279458)
chr3 (201-233)||(1360925-1360957)
chr3 (201-233)||(3054998-3055030)
chr3 (201-260)||(10445152-10445212)
chr3 (205-257)||(12761520-12761572)
chr3 (201-253)||(16354912-16354964)
chr3 (204-260)||(21960558-21960614)
chr3 (201-253)||(26989000-26989051)
chr3 (201-253)||(27093381-27093433)
chr3 (201-233)||(27923083-27923115)
chr3 (220-260)||(28531071-28531111)
chr3 (204-260)||(38550417-38550473)
chr3 (200-260)||(49494159-49494219)
[»] chr7 (40 HSPs)
chr7 (201-260)||(48771942-48772001)
chr7 (201-253)||(42836021-42836073)
chr7 (201-260)||(23301615-23301674)
chr7 (201-254)||(15905692-15905745)
chr7 (201-253)||(21854552-21854604)
chr7 (201-253)||(25021355-25021407)
chr7 (201-253)||(26459430-26459482)
chr7 (201-260)||(25590615-25590674)
chr7 (204-259)||(37085563-37085618)
chr7 (201-259)||(45976937-45976995)
chr7 (202-259)||(11720974-11721031)
chr7 (201-242)||(30579339-30579380)
chr7 (201-242)||(39631848-39631889)
chr7 (201-242)||(41487366-41487407)
chr7 (204-253)||(43590914-43590963)
chr7 (201-253)||(22760867-22760919)
chr7 (201-253)||(30442492-30442544)
chr7 (204-260)||(45709721-45709777)
chr7 (201-248)||(7801184-7801231)
chr7 (201-260)||(24513801-24513860)
chr7 (201-260)||(37233585-37233644)
chr7 (201-268)||(39499724-39499791)
chr7 (201-248)||(48039672-48039719)
chr7 (203-253)||(19553460-19553509)
chr7 (223-268)||(5934147-5934192)
chr7 (201-242)||(22932742-22932783)
chr7 (200-253)||(23595732-23595785)
chr7 (204-253)||(35119390-35119439)
chr7 (201-253)||(2446312-2446364)
chr7 (204-236)||(4161295-4161327)
chr7 (201-233)||(5273630-5273662)
chr7 (201-253)||(5579254-5579306)
chr7 (201-253)||(15137557-15137609)
chr7 (201-253)||(17041032-17041084)
chr7 (201-253)||(18363700-18363752)
chr7 (201-253)||(20952169-20952221)
chr7 (201-253)||(23552122-23552174)
chr7 (204-248)||(25956317-25956361)
chr7 (201-253)||(31835196-31835248)
chr7 (201-253)||(43215188-43215240)
[»] chr4 (25 HSPs)
chr4 (201-248)||(51250547-51250594)
chr4 (201-248)||(55427225-55427272)
chr4 (201-248)||(9241050-9241097)
chr4 (201-260)||(19238590-19238649)
chr4 (202-260)||(21660157-21660215)
chr4 (202-260)||(21668921-21668979)
chr4 (201-242)||(27965541-27965582)
chr4 (201-253)||(37109371-37109423)
chr4 (201-260)||(28635700-28635759)
chr4 (201-268)||(37720219-37720286)
chr4 (201-260)||(47044721-47044780)
chr4 (201-242)||(37443706-37443747)
chr4 (200-260)||(13901745-13901805)
chr4 (201-253)||(41346983-41347035)
chr4 (201-268)||(17618285-17618352)
chr4 (201-248)||(29195099-29195146)
chr4 (201-260)||(33619210-33619269)
chr4 (201-260)||(39509074-39509133)
chr4 (204-242)||(29312283-29312321)
chr4 (200-253)||(24234648-24234701)
chr4 (212-253)||(38869783-38869824)
chr4 (204-253)||(49576914-49576963)
chr4 (201-253)||(7292818-7292870)
chr4 (200-248)||(37980172-37980220)
chr4 (201-253)||(46545715-46545767)
[»] chr5 (19 HSPs)
chr5 (201-247)||(21589292-21589338)
chr5 (201-268)||(29075785-29075852)
chr5 (201-260)||(30109321-30109380)
chr5 (201-254)||(21549156-21549209)
chr5 (200-268)||(12883843-12883911)
chr5 (204-260)||(14495818-14495874)
chr5 (200-260)||(43241695-43241755)
chr5 (201-268)||(16457814-16457881)
chr5 (203-256)||(22020879-22020932)
chr5 (204-253)||(29692406-29692455)
chr5 (204-260)||(1410672-1410728)
chr5 (200-268)||(16436621-16436688)
chr5 (201-253)||(30883218-30883270)
chr5 (201-260)||(16773811-16773870)
chr5 (201-248)||(26598528-26598575)
chr5 (201-242)||(7918500-7918541)
chr5 (201-253)||(8278295-8278347)
chr5 (201-253)||(25627061-25627113)
chr5 (201-253)||(34984810-34984862)
[»] scaffold0299 (1 HSPs)
scaffold0299 (203-260)||(11534-11591)
[»] chr6 (16 HSPs)
chr6 (200-253)||(6776627-6776680)
chr6 (201-260)||(33549108-33549167)
chr6 (201-253)||(12188323-12188375)
chr6 (204-259)||(24641204-24641259)
chr6 (201-248)||(30127404-30127451)
chr6 (201-260)||(31623004-31623063)
chr6 (201-248)||(32613165-32613212)
chr6 (206-248)||(11597904-11597946)
chr6 (200-253)||(10338194-10338247)
chr6 (204-253)||(21418477-21418526)
chr6 (201-249)||(13441054-13441102)
chr6 (201-248)||(6758447-6758494)
chr6 (201-248)||(12234532-12234579)
chr6 (217-253)||(9433610-9433646)
chr6 (201-253)||(14557966-14558018)
chr6 (200-236)||(33931982-33932018)
[»] scaffold0258 (1 HSPs)
scaffold0258 (201-260)||(15336-15395)
[»] scaffold0009 (1 HSPs)
scaffold0009 (209-260)||(19860-19911)
[»] chr8 (28 HSPs)
chr8 (201-260)||(968366-968425)
chr8 (201-260)||(16852344-16852403)
chr8 (201-258)||(29431015-29431072)
chr8 (201-253)||(2203496-2203548)
chr8 (201-248)||(3624584-3624631)
chr8 (201-268)||(6569776-6569843)
chr8 (201-260)||(8485003-8485062)
chr8 (201-260)||(23874395-23874454)
chr8 (201-268)||(28783064-28783131)
chr8 (201-260)||(29858062-29858121)
chr8 (201-251)||(22268955-22269005)
chr8 (201-242)||(18540302-18540343)
chr8 (201-253)||(19703507-19703559)
chr8 (201-253)||(23361669-23361721)
chr8 (201-253)||(26688869-26688921)
chr8 (201-253)||(30483904-30483956)
chr8 (207-259)||(35025205-35025257)
chr8 (201-260)||(4830491-4830550)
chr8 (201-260)||(5264548-5264607)
chr8 (201-248)||(5801051-5801098)
chr8 (201-248)||(6530811-6530858)
chr8 (201-248)||(20994483-20994530)
chr8 (204-253)||(32157198-32157247)
chr8 (208-253)||(35690084-35690129)
chr8 (201-233)||(6436595-6436627)
chr8 (213-253)||(7140725-7140765)
chr8 (201-253)||(35641921-35641973)
chr8 (201-253)||(44780134-44780186)
[»] chr2 (23 HSPs)
chr2 (201-253)||(16918598-16918650)
chr2 (201-253)||(37480079-37480131)
chr2 (201-253)||(42327415-42327467)
chr2 (205-260)||(21213777-21213832)
chr2 (201-268)||(29197381-29197448)
chr2 (201-260)||(39714996-39715055)
chr2 (201-248)||(42602558-42602605)
chr2 (200-257)||(3001382-3001439)
chr2 (201-253)||(7799055-7799107)
chr2 (201-257)||(24191842-24191898)
chr2 (201-253)||(29503275-29503327)
chr2 (201-253)||(42922418-42922470)
chr2 (201-248)||(6760891-6760938)
chr2 (201-240)||(37756004-37756043)
chr2 (201-260)||(40416403-40416462)
chr2 (201-247)||(23052549-23052595)
chr2 (208-253)||(12086149-12086194)
chr2 (201-242)||(16381685-16381726)
chr2 (201-253)||(1729820-1729872)
chr2 (204-252)||(2144452-2144500)
chr2 (201-257)||(7667485-7667541)
chr2 (201-253)||(30359658-30359710)
chr2 (201-253)||(34041608-34041660)
[»] scaffold0118 (1 HSPs)
scaffold0118 (201-260)||(41646-41705)
[»] scaffold0032 (1 HSPs)
scaffold0032 (201-260)||(112286-112345)
[»] scaffold1367 (1 HSPs)
scaffold1367 (203-253)||(860-910)
[»] scaffold0417 (1 HSPs)
scaffold0417 (201-242)||(10223-10264)
[»] scaffold0194 (1 HSPs)
scaffold0194 (200-253)||(13066-13119)
[»] scaffold0021 (1 HSPs)
scaffold0021 (204-260)||(157000-157056)
[»] scaffold0002 (1 HSPs)
scaffold0002 (201-253)||(94991-95043)
[»] scaffold0070 (2 HSPs)
scaffold0070 (201-248)||(38927-38974)
scaffold0070 (204-253)||(42540-42589)
[»] scaffold0172 (2 HSPs)
scaffold0172 (201-239)||(32803-32841)
scaffold0172 (208-253)||(15797-15842)
[»] scaffold0086 (1 HSPs)
scaffold0086 (201-242)||(47386-47427)
[»] scaffold0955 (1 HSPs)
scaffold0955 (201-233)||(3467-3499)
[»] scaffold0101 (1 HSPs)
scaffold0101 (204-268)||(43337-43401)


Alignment Details
Target: chr1 (Bit Score: 193; Significance: 1e-105; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 8 - 200
Target Start/End: Complemental strand, 49274143 - 49273951
Alignment:
Q  8 ttgatttcacaagaagctgggaaatatgctatgtgcatgattcctgctctatttgcttatgcaacacttcaggcacgggtccgatactttctgatgcaaa 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49274143 ttgatttcacaagaagctgggaaatatgctatgtgcatgattcctgctctatttgcttatgcaacacttcaggcacgggtccgatactttctgatgcaaa 49274044  T
Q  108 gtttgatatttcctgttgttataggttcctctgttaccctttgacttccatgaagctttttcttggttgctagtttttaaatctggatcaggt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49274043 gtttgatatttcctgttgttataggttcctctgttaccctttgacttccatgaagctttttcttggttgctagtttttaaatctggatcaggt 49273951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 9 - 200
Target Start/End: Original strand, 49268215 - 49268405
Alignment:
Q  9 tgatttcacaagaagctgggaaatatgctatgtgcatgattcctgctctatttgcttatgcaacacttcaggcacgggtccgatactttctgatgcaaag 108  Q
    ||||||||||||||||||| |||| | | ||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||    
T  49268215 tgatttcacaagaagctggaaaattttccatgtgcatgattcctgctctatttgcttatgcaacgcttcaggcactggtcagatactttctgatgcaaag 49268314  T
Q  109 tttgatatttcctgttgttataggttcctctgttaccctttgacttccatgaagctttttcttggttgctagtttttaaatctggatcaggt 200  Q
    ||||||| ||||| |||||||| ||||| |||||||||| || |||||||| |||||||| |||| || |||||||||||||||||| ||||    
T  49268315 tttgatacttcctcttgttataagttccactgttaccctgtg-cttccatgtagctttttgttggctgttagtttttaaatctggattaggt 49268405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 8 - 200
Target Start/End: Original strand, 49255490 - 49255681
Alignment:
Q  8 ttgatttcacaagaagctgggaaatatgctatgtgcatgattcctgctctatttgcttatgcaacacttcaggcacgggtccgatactttctgatgcaaa 107  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||| |||||||||| |||| |||||||||| |||||||    
T  49255490 ttgatttcacaagaagctggaaaatttgctatgtgcatgattcctgctctttttgcttatgcaactcttcaggcactggtcagatactttcttatgcaaa 49255589  T
Q  108 gtttgatatttcctgttgttataggttcctctgttaccctttgacttccatgaagctttttcttggttgctagtttttaaatctggatcaggt 200  Q
    ||||| |  ||||| |||||||| ||||||||||||||||| || ||||||| ||| |||| ||||||  |||||||||||||||||| ||||    
T  49255590 gtttggttcttcctcttgttataagttcctctgttacccttgga-ttccatgtagcattttgttggttattagtttttaaatctggattaggt 49255681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 29 - 192
Target Start/End: Original strand, 49273259 - 49273421
Alignment:
Q  29 aaatatgctatgtgcatgattcctgctctatttgcttatgcaacacttcaggcacgggtccgatactttctgatgcaaagtttgatatttcctgttgtta 128  Q
    ||||||| |||| |||||||||||||||||||| |||||||||||||||||||||  ||| |||  ||||||||||||||| ||||| ||| | ||||||    
T  49273259 aaatatgttatgggcatgattcctgctctattttcttatgcaacacttcaggcactagtcagattgtttctgatgcaaagtatgatacttcttcttgtta 49273358  T
Q  129 taggttcctctgttaccctttgacttccatgaagctttttcttggttgctagtttttaaatctg 192  Q
    |||  |||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  49273359 tagagtcctctattacccttt-acttccatgtagctttttcttggttgctagtttttaaatctg 49273421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 40257403 - 40257462
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    |||||||||||||||||||||||||||||| || |||||||| ||||| |||| ||||||    
T  40257403 cacttgggttggcctggtggtattggcttgagacctgggagtgtgctcctcctcgaggtc 40257462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 9165267 - 9165215
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||||| ||||||||||||||||| |||||||| ||||| ||||    
T  9165267 cacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcct 9165215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 19528399 - 19528347
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||||||||||||||||||||||||||  |||| ||||| ||||    
T  19528399 cacttgggttggcctggtggtattggcttgggatctatgagtgtgctcctcct 19528347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 33700845 - 33700793
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||||| ||||||||||||||| |||||||||| ||||| ||||    
T  33700845 cacttgggttggcctagtggtattggcttggaatctgggagtgtgctcctcct 33700793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 41508835 - 41508887
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    |||||||||||||||||||||| ||| ||||||||||||||| ||||| ||||    
T  41508835 cacttgggttggcctggtggtactggtttgggatctgggagtgtgctcctcct 41508887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 260
Target Start/End: Complemental strand, 1690141 - 1690090
Alignment:
Q  209 ttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    |||| |||||||||||||||||||| ||||||||||| || |||||||||||    
T  1690141 ttggtctggtggtattggcttgggacctgggagtctgttcctccttgaggtc 1690090  T

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Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 268
Target Start/End: Complemental strand, 17745328 - 17745261
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtcccatgttc 268  Q
    ||||||||||||||| ||||||||||||||||| ||| | || ||||| |||| |||||| |||||||    
T  17745328 cacttgggttggcctagtggtattggcttgggacctgagcgtgtgctcctcctcgaggtctcatgttc 17745261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 26232458 - 26232399
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    |||||||||||| || |||||||||||||| ||||||||||| ||||| | |||||||||    
T  26232458 cacttgggttggtctagtggtattggcttgagatctgggagtgtgctcctgcttgaggtc 26232399  T

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Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 268
Target Start/End: Original strand, 30689016 - 30689083
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtcccatgttc 268  Q
    ||||| ||||| |||| |||||||||||| ||| |||||||| ||||| ||||||||||| |||||||    
T  30689016 cacttaggttgccctgatggtattggcttaggacctgggagtttgctcctccttgaggtctcatgttc 30689083  T

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Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 208 - 254
Target Start/End: Complemental strand, 52336839 - 52336793
Alignment:
Q  208 gttggcctggtggtattggcttgggatctgggagtctgctcttcctt 254  Q
    |||||||| |||||||||||||||||||||||||| ||||| |||||    
T  52336839 gttggcctagtggtattggcttgggatctgggagtgtgctcctcctt 52336793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 253
Target Start/End: Complemental strand, 8177247 - 8177202
Alignment:
Q  208 gttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    |||||||| |||||||||||||||||||||||||| ||||| ||||    
T  8177247 gttggcctagtggtattggcttgggatctgggagtgtgctcctcct 8177202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 260
Target Start/End: Original strand, 9879448 - 9879501
Alignment:
Q  207 ggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||| |||| |||||||||||||||||| |||| | |||||||||||||||    
T  9879448 ggttggcttggttgtattggcttgggatctgagagtgtactcttccttgaggtc 9879501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 37310048 - 37310007
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagt 242  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  37310048 cacttgggttggcctggtggtattagcttcggatctgggagt 37310007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 261
Target Start/End: Complemental strand, 42983443 - 42983386
Alignment:
Q  204 ttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtcc 261  Q
    |||||||||| ||||||||||| |||| ||||||||||| || || ||||||||||||    
T  42983443 ttgggttggcatggtggtattgacttgagatctgggagtgtggtcctccttgaggtcc 42983386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 52116850 - 52116801
Alignment:
Q  204 ttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||| ||||    
T  52116850 ttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcct 52116801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 260
Target Start/End: Original strand, 9117126 - 9117182
Alignment:
Q  204 ttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||||||| | |||||| |||||||||||||| ||| ||||| |||||||||||    
T  9117126 ttgggttggccggttggtatgggcttgggatctggaagtgtgctcctccttgaggtc 9117182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 9964442 - 9964494
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    |||||||||| ||||| || ||||| |||||||||||||||| ||||||||||    
T  9964442 cacttgggttagcctgatgttattgacttgggatctgggagtgtgctcttcct 9964494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 15786392 - 15786340
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    |||||||||||| || || ||||||||||||||||||||||| ||||| ||||    
T  15786392 cacttgggttggtctagtagtattggcttgggatctgggagtgtgctcctcct 15786340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 31794336 - 31794284
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||||| |||||||||||||||||  ||||||| ||||| ||||    
T  31794336 cacttgggttggcctagtggtattggcttgggacttgggagtgtgctcctcct 31794284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 36371474 - 36371526
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||||| ||||||||||||||| | |||||||| ||||| ||||    
T  36371474 cacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcct 36371526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 248
Target Start/End: Complemental strand, 15581213 - 15581166
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctc 248  Q
    ||||||||||||||||||||| ||||||||||| || ||||| |||||    
T  15581213 cacttgggttggcctggtggtgttggcttgggaccttggagtgtgctc 15581166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 248
Target Start/End: Original strand, 24730388 - 24730435
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctc 248  Q
    ||||||||||||||| ||||||||| |||| ||||||||||| |||||    
T  24730388 cacttgggttggcctagtggtattgtcttgagatctgggagtgtgctc 24730435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 253
Target Start/End: Complemental strand, 42412750 - 42412700
Alignment:
Q  202 acttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||| |||||||| |||||| ||||||||||| ||||||||||    
T  42412750 acttgggttggcccggtggtat-ggcttgagatctgggagtgtgctcttcct 42412700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 248
Target Start/End: Original strand, 44126399 - 44126446
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctc 248  Q
    ||||||||||||||||||||||||| | ||||| |||||||| |||||    
T  44126399 cacttgggttggcctggtggtattgacctgggacctgggagtgtgctc 44126446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 253
Target Start/End: Original strand, 6650605 - 6650651
Alignment:
Q  207 ggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||| ||||||||||||||||||| |||||| ||||| ||||    
T  6650605 ggttggcctagtggtattggcttgggatcggggagtatgctcctcct 6650651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Original strand, 17410238 - 17410276
Alignment:
Q  204 ttgggttggcctggtggtattggcttgggatctgggagt 242  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  17410238 ttgggttggcctagtggtattggtttgggatctgggagt 17410276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 16170050 - 16170009
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagt 242  Q
    |||||||||| |||||||||||||| ||||||| ||||||||    
T  16170050 cacttgggttagcctggtggtattgacttgggacctgggagt 16170009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 21547551 - 21547494
Alignment:
Q  202 acttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggt 259  Q
    |||||||||||||| |||||||||||||||||  ||||||  ||||| |||| |||||    
T  21547551 acttgggttggcctagtggtattggcttgggacatgggagggtgctcctcctcgaggt 21547494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 51703786 - 51703835
Alignment:
Q  204 ttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||| || ||||||||||||||| |||||||||| ||||| ||||    
T  51703786 ttgggttggtctagtggtattggcttggaatctgggagtgtgctcctcct 51703835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 952515 - 952567
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    |||||| ||||| |||||||| ||||||||||| |||||||| ||||| ||||    
T  952515 cacttgagttggtctggtggtgttggcttgggacctgggagtgtgctcatcct 952567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 4566552 - 4566604
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||||| ||| ||||||||||| | |||||||| ||||| ||||    
T  4566552 cacttgggttggcctagtgatattggcttggaacctgggagtgtgctcctcct 4566604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 260
Target Start/End: Original strand, 9224778 - 9224838
Alignment:
Q  200 tcacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||||||||| ||||||||||||  ||| |||||| |||| ||||  |||||||||||    
T  9224778 tcacttgggttggtctggtggtattgctttgagatctgagagtatgcttctccttgaggtc 9224838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 18459304 - 18459244
Alignment:
Q  201 cacttgggttggcctggtggta-ttggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    |||||||||||| || |||||| |||||||||||  ||||||| ||||| |||||||||||    
T  18459304 cacttgggttggtctagtggtaattggcttgggacttgggagtgtgctcctccttgaggtc 18459244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 260
Target Start/End: Complemental strand, 31383855 - 31383811
Alignment:
Q  216 ggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    |||||||||||||||||| |||||||| ||||| |||||| ||||    
T  31383855 ggtggtattggcttgggacctgggagtgtgctcctccttggggtc 31383811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 253
Target Start/End: Complemental strand, 44046204 - 44046168
Alignment:
Q  217 gtggtattggcttgggatctgggagtctgctcttcct 253  Q
    |||||||||||||||||||||||||| ||||| ||||    
T  44046204 gtggtattggcttgggatctgggagtgtgctcctcct 44046168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 50901585 - 50901645
Alignment:
Q  201 cacttgggttggcctggtggta-ttggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||||||||||| |||||| ||||||||||| |||| ||| ||||| |||| ||||||    
T  50901585 cacttgggttggcctagtggtaattggcttgggacctggtagtgtgctcctcctcgaggtc 50901645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 51814498 - 51814550
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    |||||||||||||||| |||||||| |||| |||||| |||| ||||| ||||    
T  51814498 cacttgggttggcctgatggtattgacttgagatctgagagtgtgctcctcct 51814550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 1e-37; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 29356746 - 29356928
Alignment:
Q  17 caagaagctgggaaatatgctatgtgcatgattcctgctctatttgcttatgcaacacttcaggcacgggtccgatactttctgatgcaaagtttgatat 116  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| | || | ||  ||||  |||||||||||||||||||||||||     
T  29356746 caagaagctggaaaatttgctatgtgcatgattcctgctctatttgcttatgcaactcctcggccaatggtcatatactttctgatgcaaagtttgatag 29356845  T
Q  117 ttcctgttgttataggttcctctgttaccctttgacttccatgaagctttttcttggttgctagtttttaaatctggatcaggt 200  Q
    ||| | ||||||||  |||| ||||||| ||||| |||||||  || ||||| ||||||||||||||| |||||| ||| ||||    
T  29356846 ttcatcttgttataacttccactgttacactttg-cttccatatagttttttattggttgctagttttcaaatctagattaggt 29356928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 10499181 - 10499122
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10499181 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 10499122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 204 - 260
Target Start/End: Original strand, 2667869 - 2667925
Alignment:
Q  204 ttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  2667869 ttgggttggcctggtggtattggcttgggatctgggagtgtgctcttcctcgaggtc 2667925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 260
Target Start/End: Original strand, 16991549 - 16991605
Alignment:
Q  204 ttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||    
T  16991549 ttgggttggcctggtggtattggcttgggatctgggagtgtactcttctttgaggtc 16991605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 31520677 - 31520618
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||| |||| ||||||    
T  31520677 cacttgggttggcctggtggcattggcttgggatctgggagtgtgctcctcctcgaggtc 31520618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 31789042 - 31788984
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggt 259  Q
    ||||||||||||||| ||| |||||||||||||||||||||| ||||| |||| |||||    
T  31789042 cacttgggttggcctagtgttattggcttgggatctgggagtgtgctcctcctcgaggt 31788984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 259
Target Start/End: Original strand, 36720385 - 36720443
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggt 259  Q
    |||||||||||| ||||||||||||||||||||| ||||||| ||||| |||| |||||    
T  36720385 cacttgggttggtctggtggtattggcttgggatatgggagtgtgctcctcctcgaggt 36720443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 4222145 - 4222197
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||| | |||||||||||||||||||||||||| ||||| ||||    
T  4222145 cacttgggttggcttagtggtattggcttgggatctgggagtgtgctcctcct 4222197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 260
Target Start/End: Complemental strand, 4844580 - 4844524
Alignment:
Q  204 ttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||||| |||||||||||| |||||||||||||||| ||||| |||| ||||||    
T  4844580 ttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtc 4844524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 260
Target Start/End: Complemental strand, 4870276 - 4870220
Alignment:
Q  204 ttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||||| |||||||||||| |||||||||||||||| ||||| |||| ||||||    
T  4870276 ttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtc 4870220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 46518632 - 46518684
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||| | |||||||||||||||||||||||||| ||||| ||||    
T  46518632 cacttgggttggcatagtggtattggcttgggatctgggagtgtgctcctcct 46518684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 2597292 - 2597233
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    |||||||||||| |||||||||||||||| |||| | ||||| ||||| |||||||||||    
T  2597292 cacttgggttggtctggtggtattggcttcggatttaggagtgtgctcctccttgaggtc 2597233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 5499479 - 5499420
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||||||||||||||||||||| |||| |||||| |||| ||||| ||||| |||||    
T  5499479 cacttgggttggcctggtggtattgacttgagatctgagagtgtgctcctccttaaggtc 5499420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 8051218 - 8051277
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||||||||||||||||||||||||||||| |||| ||| ||||  |||| ||||||    
T  8051218 cacttgggttggcctggtggtattggcttgggacctggcagtatgcttctcctcgaggtc 8051277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 259
Target Start/End: Original strand, 203094 - 203152
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggt 259  Q
    ||||||||||||||| ||||||||| ||||||||| |||||| |||| |||||| ||||    
T  203094 cacttgggttggcctagtggtattgacttgggatcagggagtgtgcttttccttaaggt 203152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 9832501 - 9832542
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagt 242  Q
    |||||||||||||| |||||||||||||||||| ||||||||    
T  9832501 cacttgggttggcccggtggtattggcttgggacctgggagt 9832542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 14339617 - 14339666
Alignment:
Q  204 ttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    |||| |||||||||||||||||||||||||| ||||||| ||||| ||||    
T  14339617 ttggattggcctggtggtattggcttgggatttgggagtgtgctcctcct 14339666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 17554778 - 17554827
Alignment:
Q  204 ttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    |||||||||  ||||||||||||||||||| |||||||| ||||||||||    
T  17554778 ttgggttggtttggtggtattggcttgggacctgggagtgtgctcttcct 17554827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 28928951 - 28928899
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||| ||||||| ||||||||||||||||||||| |||| ||||| ||||    
T  28928951 cacttggattggcctagtggtattggcttgggatctgagagtgtgctcctcct 28928899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 253
Target Start/End: Original strand, 30311314 - 30311362
Alignment:
Q  205 tgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||| ||||||| |||||||||||||||||| ||||| ||||    
T  30311314 tgggttggcctagtggtataggcttgggatctgggagtgtgctcctcct 30311362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 253
Target Start/End: Complemental strand, 51903946 - 51903898
Alignment:
Q  205 tgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||| |||| ||||||||||||||||||||||||| ||||| ||||    
T  51903946 tgggttgacctgttggtattggcttgggatctgggagtgtgctcctcct 51903898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 260
Target Start/End: Original strand, 11612307 - 11612362
Alignment:
Q  205 tgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||||||||||||||||  ||||||| |||||||| ||||| ||||| |||||    
T  11612307 tgggttggcctggtggtattcacttgggagctgggagtgtgctcctccttaaggtc 11612362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 248
Target Start/End: Complemental strand, 42799819 - 42799772
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctc 248  Q
    ||||||||||||||||||||| ||||||||||| || ||||| |||||    
T  42799819 cacttgggttggcctggtggtgttggcttgggaccttggagtgtgctc 42799772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 253
Target Start/End: Original strand, 7975428 - 7975474
Alignment:
Q  207 ggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||| ||||||| |||||||||||||||||| ||||| ||||    
T  7975428 ggttggcctagtggtataggcttgggatctgggagtgtgctcctcct 7975474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 231
Target Start/End: Original strand, 24459994 - 24460024
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgg 231  Q
    |||||||||||||||||||||||||||||||    
T  24459994 cacttgggttggcctggtggtattggcttgg 24460024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 26871576 - 26871535
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagt 242  Q
    ||||||||||||||||||||| ||||||||||| || |||||    
T  26871576 cacttgggttggcctggtggtgttggcttgggaccttggagt 26871535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 253
Target Start/End: Complemental strand, 32651503 - 32651458
Alignment:
Q  208 gttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    |||||||| ||||||||||||||||| |||||||| ||||| ||||    
T  32651503 gttggcctagtggtattggcttgggacctgggagtgtgctcctcct 32651458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 268
Target Start/End: Complemental strand, 47279458 - 47279409
Alignment:
Q  219 ggtattggcttgggatctgggagtctgctcttccttgaggtcccatgttc 268  Q
    |||||| ||||||||||||||||| ||||| ||||| ||||| |||||||    
T  47279458 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcatgttc 47279409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 1360925 - 1360957
Alignment:
Q  201 cacttgggttggcctggtggtattggcttggga 233  Q
    ||||||||||||||||||| |||||||||||||    
T  1360925 cacttgggttggcctggtgttattggcttggga 1360957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 3054998 - 3055030
Alignment:
Q  201 cacttgggttggcctggtggtattggcttggga 233  Q
    ||||||||||||||||||||| |||||||||||    
T  3054998 cacttgggttggcctggtggtgttggcttggga 3055030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 10445212 - 10445152
Alignment:
Q  201 cacttgggttggcctggtggta-ttggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||||||||||| |||| | ||||||||||| |||||||| ||||| |||| ||||||    
T  10445212 cacttgggttggcctagtggcaattggcttgggacctgggagtgtgctcctcctcgaggtc 10445152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 12761520 - 12761572
Alignment:
Q  205 tgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgag 257  Q
    |||||||| |||||||||||| ||||||| |||||||| || || ||||||||    
T  12761520 tgggttggtctggtggtattgacttgggacctgggagtgtgttcctccttgag 12761572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 16354964 - 16354912
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||||| ||||||||||||||| | ||| |||| ||||| ||||    
T  16354964 cacttgggttggcctagtggtattggcttggaacctgtgagtgtgctcctcct 16354912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 260
Target Start/End: Original strand, 21960558 - 21960614
Alignment:
Q  204 ttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||||  |||||||||||||||||||| ||| |||| ||||| |||| ||||||    
T  21960558 ttgggttgcgctggtggtattggcttgggacctgagagtgtgctcctcctcgaggtc 21960614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 26989000 - 26989051
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||||| ||||||||||||| ||||||| |||| ||||| ||||    
T  26989000 cacttgggttggcctagtggtattggctt-ggatctgagagtttgctcctcct 26989051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 27093433 - 27093381
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||||| ||||||||||||||| |  ||||||| ||||| ||||    
T  27093433 cacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcct 27093381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 27923115 - 27923083
Alignment:
Q  201 cacttgggttggcctggtggtattggcttggga 233  Q
    ||||| |||||||||||||||||||||||||||    
T  27923115 cacttaggttggcctggtggtattggcttggga 27923083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 260
Target Start/End: Complemental strand, 28531111 - 28531071
Alignment:
Q  220 gtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||||||||||||||||||| ||||| |||| ||||||    
T  28531111 gtattggcttgggatctgggagtatgctcctcctcgaggtc 28531071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 260
Target Start/End: Complemental strand, 38550473 - 38550417
Alignment:
Q  204 ttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||||||||| |||||||| ||| || | ||||||| ||||| |||||||||||    
T  38550473 ttgggttggcctgttggtattgacttagggtttgggagtgtgctcctccttgaggtc 38550417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 260
Target Start/End: Complemental strand, 49494219 - 49494159
Alignment:
Q  200 tcacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||||||| |||| ||||||||| ||||  || ||||||| |||||||||| ||||||    
T  49494219 tcacttgggttagcctagtggtattgacttgaaatttgggagtgtgctcttcctcgaggtc 49494159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 48771942 - 48772001
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||    
T  48771942 cacttgggttggcttggtggtattggcttgggatctgggagtgtgctcctccttgaggtc 48772001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 42836073 - 42836021
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||||| ||||||||||||||||| |||||||| ||||||||||    
T  42836073 cacttgggttggcctagtggtattggcttgggacctgggagtgtgctcttcct 42836021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 23301674 - 23301615
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||||||||||||||||||||| |||||||  ||||||| ||||| |||||||||||    
T  23301674 cacttgggttggcctggtggtattgacttgggacttgggagtgtgctcctccttgaggtc 23301615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 15905745 - 15905692
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcctt 254  Q
    ||||||||||||||||| ||||||||||||||| |||||||| ||||| |||||    
T  15905745 cacttgggttggcctggcggtattggcttgggacctgggagtgtgctcctcctt 15905692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 21854552 - 21854604
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    |||||||||||||||| ||||||||||| ||||||||||||| ||||| ||||    
T  21854552 cacttgggttggcctgatggtattggctagggatctgggagtgtgctcctcct 21854604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 25021407 - 25021355
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||||| ||||||||||||||||| |||||||| ||||| ||||    
T  25021407 cacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcct 25021355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 26459482 - 26459430
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||||| ||||||||||||||||| |||||||| ||||| ||||    
T  26459482 cacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcct 26459430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 25590615 - 25590674
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||||||| |||| ||||||||||||| ||||||||||| ||||| |||| ||||||    
T  25590615 cacttgggttgacctgttggtattggcttgagatctgggagtgtgctcctcctcgaggtc 25590674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 259
Target Start/End: Complemental strand, 37085618 - 37085563
Alignment:
Q  204 ttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggt 259  Q
    |||||||||| |||||||||||||||||||| ||||||| ||||| |||| |||||    
T  37085618 ttgggttggcatggtggtattggcttgggatttgggagtgtgctcatcctcgaggt 37085563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 45976995 - 45976937
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggt 259  Q
    ||||||||||||||| |||||||||||||| || |||||||| ||||| ||||| ||||    
T  45976995 cacttgggttggcctagtggtattggcttgtgacctgggagtgtgctcctccttaaggt 45976937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 11721031 - 11720974
Alignment:
Q  202 acttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggt 259  Q
    |||| ||||||||||||||||||||||||||| |||||| | ||||| ||||| ||||    
T  11721031 acttcggttggcctggtggtattggcttgggacctgggaatgtgctcctccttaaggt 11720974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 30579339 - 30579380
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagt 242  Q
    |||||||||||||||||||||||||||||| || ||||||||    
T  30579339 cacttgggttggcctggtggtattggcttgagacctgggagt 30579380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 39631848 - 39631889
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagt 242  Q
    ||||||||||||||| ||||||||||||||||| ||||||||    
T  39631848 cacttgggttggcctagtggtattggcttgggacctgggagt 39631889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 41487366 - 41487407
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagt 242  Q
    |||||||||||||||||||||||||||||||||  |||||||    
T  41487366 cacttgggttggcctggtggtattggcttgggacttgggagt 41487407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 43590914 - 43590963
Alignment:
Q  204 ttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||| ||||    
T  43590914 ttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcct 43590963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 22760867 - 22760919
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    |||||||||||| |||||||||||| ||||||| |||||||| ||||| ||||    
T  22760867 cacttgggttggtctggtggtattgacttgggacctgggagtgtgctcctcct 22760919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 30442492 - 30442544
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||||  ||||||||||||||||| |||||||| ||||| ||||    
T  30442492 cacttgggttggcccagtggtattggcttgggacctgggagtttgctcctcct 30442544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 260
Target Start/End: Complemental strand, 45709777 - 45709721
Alignment:
Q  204 ttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    |||||||||||| |||||||| |||||||||||| |||| ||||| |||| ||||||    
T  45709777 ttgggttggcctagtggtattagcttgggatctgagagtgtgctcctcctcgaggtc 45709721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 248
Target Start/End: Original strand, 7801184 - 7801231
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctc 248  Q
    ||||||| ||||||||||||||||| ||||||| |||||||| |||||    
T  7801184 cacttggtttggcctggtggtattgacttgggacctgggagtgtgctc 7801231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 24513801 - 24513860
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||||||||||| |||||||||||||| ||| ||||||| | ||  |||||||||||    
T  24513801 cacttgggttggcctagtggtattggcttgagatttgggagtgtacttctccttgaggtc 24513860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 37233644 - 37233585
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||||||| | ||||| |||||||||||||| ||||||| ||||| ||||| |||||    
T  37233644 cacttgggttgacttggtgatattggcttgggatgtgggagtgtgctcctccttaaggtc 37233585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 268
Target Start/End: Complemental strand, 39499791 - 39499724
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtcccatgttc 268  Q
    ||||||||||||||| ||||||||||||||||| ||| |||| || || || || ||||| |||||||    
T  39499791 cacttgggttggcctagtggtattggcttgggacctgtgagtgtgttcctctttaaggtctcatgttc 39499724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 248
Target Start/End: Complemental strand, 48039719 - 48039672
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctc 248  Q
    ||||||||||||||||||||| |||||||| ||||| ||||| |||||    
T  48039719 cacttgggttggcctggtggtgttggcttgcgatcttggagtatgctc 48039672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 253
Target Start/End: Original strand, 19553460 - 19553509
Alignment:
Q  203 cttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||| ||||    
T  19553460 cttgggttggcctggtggtattggctt-ggacctgggagtgtgctcctcct 19553509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 268
Target Start/End: Original strand, 5934147 - 5934192
Alignment:
Q  223 ttggcttgggatctgggagtctgctcttccttgaggtcccatgttc 268  Q
    |||||||||||||||||||| ||||| ||||||||||  |||||||    
T  5934147 ttggcttgggatctgggagtgtgctcctccttgaggtttcatgttc 5934192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 22932783 - 22932742
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagt 242  Q
    ||||||||||||  ||||||||||||||||||| ||||||||    
T  22932783 cacttgggttggtatggtggtattggcttgggacctgggagt 22932742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 23595732 - 23595785
Alignment:
Q  200 tcacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||| |||||||||||| |||| ||||| ||||| ||||| ||||    
T  23595732 tcacttgggttggtctggtggtattgacttgagatctcggagtgtgctcctcct 23595785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 35119390 - 35119439
Alignment:
Q  204 ttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    |||||||||||| ||||||||| ||||||||||||| || ||||| ||||    
T  35119390 ttgggttggcctagtggtattgacttgggatctgggtgtatgctcatcct 35119439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 2446312 - 2446364
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    |||||||||||| ||| ||||||||||||||||  ||||||| ||||| ||||    
T  2446312 cacttgggttggtctgatggtattggcttgggacttgggagtgtgctcctcct 2446364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 4161295 - 4161327
Alignment:
Q  204 ttgggttggcctggtggtattggcttgggatct 236  Q
    ||||||||| |||||||||||||||||||||||    
T  4161295 ttgggttggtctggtggtattggcttgggatct 4161327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 5273662 - 5273630
Alignment:
Q  201 cacttgggttggcctggtggtattggcttggga 233  Q
    ||||||||||||||||||||| |||||||||||    
T  5273662 cacttgggttggcctggtggtgttggcttggga 5273630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 5579306 - 5579254
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||| ||||||||| ||||||||||| || ||||| ||||| ||||    
T  5579306 cacttgggttgacctggtggtgttggcttgggaccttggagtgtgctcctcct 5579254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 15137557 - 15137609
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    |||||||||||||||||||||| || |||||||| | ||||| ||||| ||||    
T  15137557 cacttgggttggcctggtggtactgacttgggatttaggagtgtgctcctcct 15137609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 17041084 - 17041032
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    |||||||||||| || |||| ||||||||||||||||| ||| ||||| ||||    
T  17041084 cacttgggttggtctagtggcattggcttgggatctggaagtgtgctcctcct 17041032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 18363700 - 18363752
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||||| ||||||| |||||| ||| ||||||| ||||| ||||    
T  18363700 cacttgggttggcctagtggtataggcttgagatttgggagtgtgctcctcct 18363752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 20952221 - 20952169
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||| |||| ||||||||| |||||| |||||||| ||||| ||||    
T  20952221 cacttgggttgacctgatggtattggtttgggacctgggagtgtgctcctcct 20952169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 23552122 - 23552174
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||||| ||| ||||| ||||||| |||||||| ||||| ||||    
T  23552122 cacttgggttggcctagtgctattgacttgggacctgggagtgtgctcctcct 23552174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 248
Target Start/End: Complemental strand, 25956361 - 25956317
Alignment:
Q  204 ttgggttggcctggtggtattggcttgggatctgggagtctgctc 248  Q
    |||||||||||| ||||||||||||||||| || ||||| |||||    
T  25956361 ttgggttggcctagtggtattggcttgggaccttggagtgtgctc 25956317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 31835196 - 31835248
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||||||||||| ||||||||||  || ||||| ||||| ||||    
T  31835196 cacttgggttggcctggtggtgttggcttgggtgcttggagtgtgctcctcct 31835248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 43215188 - 43215240
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    |||||||||||| || ||||||||||||||||| || ||||| ||||| ||||    
T  43215188 cacttgggttggtctagtggtattggcttgggacctcggagtgtgctcctcct 43215240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 4e-16; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 248
Target Start/End: Complemental strand, 51250594 - 51250547
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctc 248  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||    
T  51250594 cacttgggttggcctggtggtattggcttgggatctgggagtgtgctc 51250547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 248
Target Start/End: Complemental strand, 55427272 - 55427225
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctc 248  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  55427272 cacttgggttggcctggtggtattggcttgggacctgggagtctgctc 55427225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 248
Target Start/End: Complemental strand, 9241097 - 9241050
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctc 248  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||    
T  9241097 cacttgggttggcctggtggtattggcttgggatctggtagtgtgctc 9241050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 19238649 - 19238590
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    |||||||||||||||||||||||||||||||||  ||||||| ||||| |||| ||||||    
T  19238649 cacttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcgaggtc 19238590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 21660215 - 21660157
Alignment:
Q  202 acttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||||||| |||||||||||| |||| ||||||||||| |||||||||| ||||||    
T  21660215 acttgggttggtctggtggtattgacttgagatctgggagtgtgctcttcctcgaggtc 21660157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 21668979 - 21668921
Alignment:
Q  202 acttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||||||| |||||||||||| |||| ||||||||||| |||||||||| ||||||    
T  21668979 acttgggttggtctggtggtattgacttgagatctgggagtgtgctcttcctcgaggtc 21668921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 27965582 - 27965541
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagt 242  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  27965582 cacttgggttggcctagtggtattggcttgggatctgggagt 27965541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 37109423 - 37109371
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||||| ||||||||||||||||| |||||||| ||||| ||||    
T  37109423 cacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcct 37109371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 28635700 - 28635759
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||||||| |||||||||| || |||||||||||||||| ||||| |||| ||||||    
T  28635700 cacttgggttgtcctggtggtactgacttgggatctgggagtgtgctcctcctggaggtc 28635759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 268
Target Start/End: Complemental strand, 37720286 - 37720219
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtcccatgttc 268  Q
    ||||||||||||||||||| ||||||||||||| |||||||| ||| | ||||  |||||||| ||||    
T  37720286 cacttgggttggcctggtgttattggcttgggacctgggagtgtgcccctcctcaaggtcccaggttc 37720219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 47044721 - 47044780
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||| ||||||||||||||||| ||||||||||| |||| ||||| |||| ||||||    
T  47044721 cacttggattggcctggtggtattgacttgggatctgagagtttgctcctcctcgaggtc 47044780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 37443706 - 37443747
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagt 242  Q
    ||||||||||| ||| ||||||||||||||||||||||||||    
T  37443706 cacttgggttgacctagtggtattggcttgggatctgggagt 37443747  T

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Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 260
Target Start/End: Original strand, 13901745 - 13901805
Alignment:
Q  200 tcacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||||||||| || |||||||||||||| || |||||||| || || |||||||||||    
T  13901745 tcacttgggttggtctagtggtattggcttgagacctgggagtgtgttcctccttgaggtc 13901805  T

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Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 41347035 - 41346983
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    |||||||||||||||| ||||||||| ||| ||||||||||| ||||| ||||    
T  41347035 cacttgggttggcctgatggtattggtttgagatctgggagtatgctcctcct 41346983  T

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Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 268
Target Start/End: Original strand, 17618285 - 17618352
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtcccatgttc 268  Q
    ||||||||  ||| |||||||||||||||| || |||||||| ||||| |||| |||||| |||||||    
T  17618285 cacttgggccggcttggtggtattggcttgagacctgggagtgtgctcctcctcgaggtctcatgttc 17618352  T

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Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 248
Target Start/End: Original strand, 29195099 - 29195146
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctc 248  Q
    ||||||||||||||||||||| ||||||||||| || ||||| |||||    
T  29195099 cacttgggttggcctggtggtgttggcttgggaccttggagtgtgctc 29195146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 33619210 - 33619269
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||||||| | ||||||||||||||| |||||||||||  || || |||||||||||    
T  33619210 cacttgggttgccttggtggtattggcttaggatctgggagcgtggtcctccttgaggtc 33619269  T

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Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 39509074 - 39509133
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    |||||||||||| ||  ||||| ||||||||||||||||||| ||||| |||| ||||||    
T  39509074 cacttgggttggtctcatggtaatggcttgggatctgggagtgtgctcctcctcgaggtc 39509133  T

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Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 29312321 - 29312283
Alignment:
Q  204 ttgggttggcctggtggtattggcttgggatctgggagt 242  Q
    |||||||||||| |||||||||||||||||| |||||||    
T  29312321 ttgggttggcctagtggtattggcttgggatgtgggagt 29312283  T

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Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 24234648 - 24234701
Alignment:
Q  200 tcacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    |||||||||||| || ||||||||||||||||||  ||||||| ||||| ||||    
T  24234648 tcacttgggttgtccaggtggtattggcttgggacttgggagtgtgctcatcct 24234701  T

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Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 38869783 - 38869824
Alignment:
Q  212 gcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    |||| |||||||||||||||||||||||||| ||||| ||||    
T  38869783 gcctagtggtattggcttgggatctgggagtgtgctcctcct 38869824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 49576963 - 49576914
Alignment:
Q  204 ttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    |||||||||||||||||||||||||| |||  ||||||| ||||| ||||    
T  49576963 ttgggttggcctggtggtattggctttggacttgggagtgtgctcctcct 49576914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 7292870 - 7292818
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    |||||||||||| || ||||||||||||||| | |||||||| ||||| ||||    
T  7292870 cacttgggttggtctagtggtattggcttggaacctgggagtgtgctcctcct 7292818  T

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Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 37980220 - 37980172
Alignment:
Q  200 tcacttgggttggcctggtggtattggcttgggatctgggagtctgctc 248  Q
    |||||||||||||||||||| | ||||||||||| || ||||| |||||    
T  37980220 tcacttgggttggcctggtgatgttggcttgggaccttggagtgtgctc 37980172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 46545715 - 46545767
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||||| |||||||||||||| || ||| |||| ||||| ||||    
T  46545715 cacttgggttggcctagtggtattggcttgagacctgagagtgtgctcctcct 46545767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 247
Target Start/End: Original strand, 21589292 - 21589338
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgct 247  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  21589292 cacttgggttggcctggtggtattggcttgggacctgggagtctgct 21589338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 268
Target Start/End: Original strand, 29075785 - 29075852
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtcccatgttc 268  Q
    |||||||||| |||| |||||||||||||||||||||||||| ||||| |||| ||| || |||||||    
T  29075785 cacttgggtttgcctagtggtattggcttgggatctgggagtgtgctcctcctcgagatctcatgttc 29075852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 30109380 - 30109321
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||||||||| |||||||||||||||| || |||||||| ||||| |||||||||||    
T  30109380 cacttgggttggcttggtggtattggcttgtgacctgggagtgtgctcctccttgaggtc 30109321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 21549209 - 21549156
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcctt 254  Q
    ||||||||||||||| ||||||||||||||||| |||||||| ||||| |||||    
T  21549209 cacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctt 21549156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 268
Target Start/End: Original strand, 12883843 - 12883911
Alignment:
Q  200 tcacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtcccatgttc 268  Q
    |||||||| ||| |||| ||||||| | ||||||||||||||| ||||| ||||||||||| |||||||    
T  12883843 tcacttggattgacctgatggtattaggttgggatctgggagtgtgctcctccttgaggtctcatgttc 12883911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 260
Target Start/End: Complemental strand, 14495874 - 14495818
Alignment:
Q  204 ttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||||| |||||||||||| |||||||||||||||| ||||| |||| ||||||    
T  14495874 ttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtc 14495818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 260
Target Start/End: Complemental strand, 43241755 - 43241695
Alignment:
Q  200 tcacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||||||||| || ||||||||| |||||||||| ||||| ||| |||||||||||||    
T  43241755 tcacttgggttggtctagtggtattgacttgggatcttggagtgtgcccttccttgaggtc 43241695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 268
Target Start/End: Original strand, 16457814 - 16457881
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtcccatgttc 268  Q
    ||||| ||||||||||||||||||||||||||| || ||||| ||||| ||||  ||||| |||||||    
T  16457814 cacttaggttggcctggtggtattggcttgggaccttggagtgtgctcctcctcaaggtctcatgttc 16457881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 22020932 - 22020879
Alignment:
Q  203 cttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttga 256  Q
    ||||||||||| | |||||||| ||||||||||||||||| ||||| |||||||    
T  22020932 cttgggttggcatagtggtattagcttgggatctgggagtgtgctcctccttga 22020879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 29692455 - 29692406
Alignment:
Q  204 ttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||| ||||||||||||| ||||||||||||||| ||||| ||||    
T  29692455 ttgggttggtctggtggtattggattgggatctgggagtgtgctcctcct 29692406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 260
Target Start/End: Complemental strand, 1410728 - 1410672
Alignment:
Q  204 ttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||||| |||||||||||| |||||||| ||||||| ||||| |||| ||||||    
T  1410728 ttgggttggtctggtggtattgacttgggatatgggagtgtgctcctcctcgaggtc 1410672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 268
Target Start/End: Original strand, 16436621 - 16436688
Alignment:
Q  200 tcacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtcccatgttc 268  Q
    |||||||||||||||| ||||||||||||||||| || ||||| ||||| ||||  ||||| |||||||    
T  16436621 tcacttgggttggcctagtggtattggcttggga-cttggagtgtgctcctcctcaaggtctcatgttc 16436688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 30883270 - 30883218
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    |||||||||||| || ||||||||||||||||| |||||||| ||||| ||||    
T  30883270 cacttgggttggtctagtggtattggcttgggacctgggagtgtgctcctcct 30883218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 16773811 - 16773870
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    |||||| ||||| |||||||||||| ||||||| |||||||| ||||| |||| ||||||    
T  16773811 cacttgagttggtctggtggtattgacttgggacctgggagtgtgctcctcctcgaggtc 16773870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 248
Target Start/End: Original strand, 26598528 - 26598575
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctc 248  Q
    ||||||| ||||||| ||||||||||||||||||||| |||| |||||    
T  26598528 cacttggattggcctagtggtattggcttgggatctgagagtgtgctc 26598575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 7918541 - 7918500
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagt 242  Q
    ||||||||||||||| ||||||||||||||| | ||||||||    
T  7918541 cacttgggttggcctagtggtattggcttggaacctgggagt 7918500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 8278347 - 8278295
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    |||||||||||| ||| ||||||||||||||||  ||||||| ||||| ||||    
T  8278347 cacttgggttggtctgatggtattggcttgggacttgggagtgtgctcctcct 8278295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 25627061 - 25627113
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||||| ||||||||||||||| |  ||||||| ||||| ||||    
T  25627061 cacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcct 25627113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 34984810 - 34984862
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    |||||||||||| || ||||||||||||||| | |||||||| ||||| ||||    
T  34984810 cacttgggttggtctagtggtattggcttggaacctgggagtgtgctcctcct 34984862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 203 - 260
Target Start/End: Original strand, 11534 - 11591
Alignment:
Q  203 cttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||| |||| ||||||    
T  11534 cttgggatggcctggtggtattggcttgggatctgggagtgtgctcctcctcgaggtc 11591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 6776680 - 6776627
Alignment:
Q  200 tcacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||| ||||    
T  6776680 tcacttgggttggcctggtggtattggcttgggatctgggggtgtgctcctcct 6776627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 33549108 - 33549167
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    |||||||||||| |||||||||||||||||||| |||||||| ||||| |||| ||||||    
T  33549108 cacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtc 33549167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 12188375 - 12188323
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||||| ||||||||||||||||| |||||||| ||||| ||||    
T  12188375 cacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcct 12188323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 259
Target Start/End: Complemental strand, 24641259 - 24641204
Alignment:
Q  204 ttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggt 259  Q
    |||||||||| ||||||||||| |||||||||||||||| ||||| |||| |||||    
T  24641259 ttgggttggcttggtggtattgacttgggatctgggagtgtgctcctcctcgaggt 24641204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 248
Target Start/End: Original strand, 30127404 - 30127451
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctc 248  Q
    |||||||||||| ||||||||||||||||||| ||||||||| |||||    
T  30127404 cacttgggttggtctggtggtattggcttggggtctgggagtgtgctc 30127451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 31623063 - 31623004
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    |||||||||||| | |||||||||||||||||| |||||||| ||||| |||| ||||||    
T  31623063 cacttgggttggtccggtggtattggcttgggacctgggagtgtgctcctcctcgaggtc 31623004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 248
Target Start/End: Complemental strand, 32613212 - 32613165
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctc 248  Q
    ||||||||||||||||||||||||| |||||| ||||||||| |||||    
T  32613212 cacttgggttggcctggtggtattgacttggggtctgggagtgtgctc 32613165  T

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Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 206 - 248
Target Start/End: Original strand, 11597904 - 11597946
Alignment:
Q  206 gggttggcctggtggtattggcttgggatctgggagtctgctc 248  Q
    |||||| |||||||||||||||||||||||||||||| |||||    
T  11597904 gggttgacctggtggtattggcttgggatctgggagtatgctc 11597946  T

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Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 10338247 - 10338194
Alignment:
Q  200 tcacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    |||||||||||||| ||||||||||||||||||| || ||||| ||||| ||||    
T  10338247 tcacttgggttggcatggtggtattggcttgggacctaggagtgtgctcctcct 10338194  T

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Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 21418477 - 21418526
Alignment:
Q  204 ttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||| ||||    
T  21418477 ttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcct 21418526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 249
Target Start/End: Original strand, 13441054 - 13441102
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctct 249  Q
    |||||||||||| | |||||||||||||||||| |||||||| ||||||    
T  13441054 cacttgggttggtcgggtggtattggcttgggacctgggagtgtgctct 13441102  T

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Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 248
Target Start/End: Complemental strand, 6758494 - 6758447
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctc 248  Q
    |||||| |||||||||||||||||||||| |||| ||||||| |||||    
T  6758494 cacttgtgttggcctggtggtattggcttaggatttgggagtgtgctc 6758447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 248
Target Start/End: Complemental strand, 12234579 - 12234532
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctc 248  Q
    ||||| ||||||||||||||||||| ||||||| |||||||| |||||    
T  12234579 cacttaggttggcctggtggtattgacttgggacctgggagtgtgctc 12234532  T

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Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 253
Target Start/End: Complemental strand, 9433646 - 9433610
Alignment:
Q  217 gtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  9433646 gtggtattgacttgggatctgggagtgtgctcttcct 9433610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 14557966 - 14558018
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    |||||||||||| |||||||| ||||||||||| |||| ||| ||||| ||||    
T  14557966 cacttgggttggtctggtggtgttggcttgggacctggaagtgtgctcctcct 14558018  T

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Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 33932018 - 33931982
Alignment:
Q  200 tcacttgggttggcctggtggtattggcttgggatct 236  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  33932018 tcacttgggttgacctggtggtattgacttgggatct 33931982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 15395 - 15336
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    |||||||||||| |||||||||||||||||||| |||||||| ||||| |||| ||||||    
T  15395 cacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtc 15336  T

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Target: scaffold0009 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 260
Target Start/End: Complemental strand, 19911 - 19860
Alignment:
Q  209 ttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||| || ||||||||||||||||||||||||||||||| |||||||||||    
T  19911 ttggcatgatggtattggcttgggatctgggagtctgctcctccttgaggtc 19860  T

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Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 968366 - 968425
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    |||||| |||||||||||||||||||||||||| |||||||| ||||| |||| ||||||    
T  968366 cacttgagttggcctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtc 968425  T

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Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 16852344 - 16852403
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||||||||||| ||||||||||||||||| |||||||| ||||| |||| ||||||    
T  16852344 cacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcgaggtc 16852403  T

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Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 258
Target Start/End: Original strand, 29431015 - 29431072
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgagg 258  Q
    ||||||||||||||||| |||||||||||||||  ||||||| ||||| |||||||||    
T  29431015 cacttgggttggcctggcggtattggcttgggacttgggagtgtgctcctccttgagg 29431072  T

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Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 2203496 - 2203548
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||||| ||||||||||||||||| |||||||| ||||| ||||    
T  2203496 cacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcct 2203548  T

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Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 248
Target Start/End: Original strand, 3624584 - 3624631
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctc 248  Q
    ||||||||||||||| ||||||||||||||||| |||||||| |||||    
T  3624584 cacttgggttggcctagtggtattggcttgggacctgggagtgtgctc 3624631  T

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Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 268
Target Start/End: Complemental strand, 6569843 - 6569776
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtcccatgttc 268  Q
    ||||| ||||||||| ||| |||||||||||||||||||||| ||||| ||||| ||||  |||||||    
T  6569843 cacttaggttggcctagtgatattggcttgggatctgggagtgtgctcctcctttaggtttcatgttc 6569776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 8485003 - 8485062
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    |||||||||||||||||||||||| |||||||| ||| |||| ||||| || ||||||||    
T  8485003 cacttgggttggcctggtggtatttgcttgggacctgtgagtgtgctcctctttgaggtc 8485062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 23874454 - 23874395
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||||||||||| ||||||||||||||||| |||||| ||||| | |||| ||||||    
T  23874454 cacttgggttggcctagtggtattggcttgggacctgggaatctgcgcctcctcgaggtc 23874395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 268
Target Start/End: Original strand, 28783064 - 28783131
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtcccatgttc 268  Q
    ||||||||||||| |||||||||||||||| || |||||||| ||||| ||||  ||||| |||||||    
T  28783064 cacttgggttggcttggtggtattggcttgagacctgggagtgtgctcctcctcaaggtctcatgttc 28783131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 29858121 - 29858062
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||| ||||||||||||||||||||||||| | |||||| ||||| |||| ||||||    
T  29858121 cacttggattggcctggtggtattggcttgggaccagggagtgtgctcctcctcgaggtc 29858062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 22269005 - 22268955
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttc 251  Q
    ||||||||||||||||||||| ||||||||||| || ||||| ||||||||    
T  22269005 cacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcttc 22268955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 18540302 - 18540343
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagt 242  Q
    ||||||||||||||| ||||||||||||||||| ||||||||    
T  18540302 cacttgggttggcctagtggtattggcttgggacctgggagt 18540343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 19703559 - 19703507
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||||| ||||||||||||||||| ||| |||| ||||| ||||    
T  19703559 cacttgggttggcctagtggtattggcttgggacctgagagtgtgctcctcct 19703507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 23361721 - 23361669
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||| ||||||||||||| |||||||| ||||||| ||||| ||||    
T  23361721 cacttgggttgacctggtggtattgacttgggatatgggagtgtgctcctcct 23361669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 26688869 - 26688921
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||||||||||| ||||||||||| || ||||| ||||| ||||    
T  26688869 cacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcctcct 26688921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 30483956 - 30483904
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||||  |||||||||||||||||| ||||||| ||||| ||||    
T  30483956 cacttgggttggcccagtggtattggcttgggatatgggagtgtgctcctcct 30483904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 259
Target Start/End: Original strand, 35025205 - 35025257
Alignment:
Q  207 ggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggt 259  Q
    |||||||||||||||||||||||||||| | | ||| ||||| ||||||||||    
T  35025205 ggttggcctggtggtattggcttgggatttagaagtatgctcctccttgaggt 35025257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 4830491 - 4830550
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    |||||||||||||||||||||||| | |||||||||| |||| || || |||| ||||||    
T  4830491 cacttgggttggcctggtggtatttgtttgggatctgagagtgtgttcctcctcgaggtc 4830550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 5264548 - 5264607
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||||||||||| ||||||||||||||| | |||||| | ||||| |||| ||||||    
T  5264548 cacttgggttggcctagtggtattggcttggaacctgggaatgtgctcctcctcgaggtc 5264607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 248
Target Start/End: Original strand, 5801051 - 5801098
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctc 248  Q
    ||||||||||| |||||||||||| ||||||||||| ||||| |||||    
T  5801051 cacttgggttgacctggtggtattagcttgggatctaggagtgtgctc 5801098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 248
Target Start/End: Original strand, 6530811 - 6530858
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctc 248  Q
    ||||||||||||||||||||| ||||||||||| || ||||| |||||    
T  6530811 cacttgggttggcctggtggtgttggcttgggacctaggagtgtgctc 6530858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 248
Target Start/End: Complemental strand, 20994530 - 20994483
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctc 248  Q
    ||||||||||||||| ||||||||| ||||||| |||||||| |||||    
T  20994530 cacttgggttggcctagtggtattgacttgggacctgggagtgtgctc 20994483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 32157198 - 32157247
Alignment:
Q  204 ttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    |||||||||||||||||||||| ||||||| || ||||| ||||| ||||    
T  32157198 ttgggttggcctggtggtattgacttgggaccttggagtatgctcctcct 32157247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 253
Target Start/End: Complemental strand, 35690129 - 35690084
Alignment:
Q  208 gttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    |||||||| ||||||||||||||||||||||| || ||||| ||||    
T  35690129 gttggcctagtggtattggcttgggatctgggtgtttgctcctcct 35690084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 6436627 - 6436595
Alignment:
Q  201 cacttgggttggcctggtggtattggcttggga 233  Q
    ||||||||||| |||||||||||||||||||||    
T  6436627 cacttgggttgccctggtggtattggcttggga 6436595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 7140725 - 7140765
Alignment:
Q  213 cctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||||||||||||||||| || ||||| ||||    
T  7140725 cctggtggtattggcttgggatctgggtgtgtgctcctcct 7140765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 35641973 - 35641921
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    |||||||||||| |||||||||| |||||| ||| ||||||| ||||| ||||    
T  35641973 cacttgggttggtctggtggtatcggcttgagatttgggagtgtgctcctcct 35641921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 44780186 - 44780134
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||||| |||| ||||||||||||  ||||||| ||||| ||||    
T  44780186 cacttgggttggcctagtggcattggcttgggacttgggagtgtgctcctcct 44780134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000006; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 16918650 - 16918598
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||||| |||||||||| ||||||||||||||| ||||| ||||    
T  16918650 cacttgggttggcctagtggtattggtttgggatctgggagtgtgctcctcct 16918598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 37480079 - 37480131
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||||||||||||||||||||||| ||| |||| ||||| ||||    
T  37480079 cacttgggttggcctggtggtattggcttgggacctgagagtgtgctcctcct 37480131  T

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Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 42327467 - 42327415
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||||| ||||||||||||||||| |||||||| ||||| ||||    
T  42327467 cacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcct 42327415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 260
Target Start/End: Original strand, 21213777 - 21213832
Alignment:
Q  205 tgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    |||||||| |||||||||||||||||||| |||||||| || || |||||||||||    
T  21213777 tgggttggtctggtggtattggcttgggacctgggagtgtgttcctccttgaggtc 21213832  T

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Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 268
Target Start/End: Complemental strand, 29197448 - 29197381
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtcccatgttc 268  Q
    ||||||||||||| ||||||||||| |||||||  ||||||| ||||| ||||||| ||| |||||||    
T  29197448 cacttgggttggcttggtggtattgacttgggacttgggagtgtgctcctccttgatgtctcatgttc 29197381  T

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Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 39714996 - 39715055
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||||||||| ||||||||||| ||||||| |||||||| ||||| |||| ||||||    
T  39714996 cacttgggttggcatggtggtattgacttgggacctgggagtgtgctcctcctcgaggtc 39715055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 248
Target Start/End: Original strand, 42602558 - 42602605
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctc 248  Q
    ||||||||||||||| ||||||||||||||||| |||||||| |||||    
T  42602558 cacttgggttggcctagtggtattggcttgggacctgggagtgtgctc 42602605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 257
Target Start/End: Original strand, 3001382 - 3001439
Alignment:
Q  200 tcacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgag 257  Q
    |||||||||||||||| ||||||||| |||| ||||| ||||| ||||| ||||||||    
T  3001382 tcacttgggttggcctagtggtattgacttgagatctaggagtgtgctcctccttgag 3001439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 7799107 - 7799055
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||| |||||||||||||||||||||  ||||||| ||||| ||||    
T  7799107 cacttgggttgtcctggtggtattggcttgggacttgggagtgtgctcctcct 7799055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 24191842 - 24191898
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgag 257  Q
    |||||| ||||||||| |||||||||||||||| ||| |||| ||||| ||||||||    
T  24191842 cacttgagttggcctgatggtattggcttgggacctgagagtgtgctcctccttgag 24191898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 29503275 - 29503327
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||||| |||||||||| |||||| |||||||| ||||| ||||    
T  29503275 cacttgggttggcctagtggtattggtttgggacctgggagtgtgctcctcct 29503327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 42922418 - 42922470
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||||| ||||||||||||||| | |||||||| ||||| ||||    
T  42922418 cacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcct 42922470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 248
Target Start/End: Original strand, 6760891 - 6760938
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctc 248  Q
    |||||||||||| ||||| ||||||| ||||||||||||||| |||||    
T  6760891 cacttgggttggtctggtagtattggtttgggatctgggagtatgctc 6760938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 240
Target Start/End: Complemental strand, 37756043 - 37756004
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctggga 240  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  37756043 cacttgggttggcttggtggtattggcttgggacctggga 37756004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 40416462 - 40416403
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||||||||||| ||||||||| ||||| | |||||||| ||||| ||||| |||||    
T  40416462 cacttgggttggcctagtggtattgacttggaacctgggagtatgctcctccttaaggtc 40416403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 247
Target Start/End: Complemental strand, 23052595 - 23052549
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgct 247  Q
    ||||| |||||||||||||||||||||||||||  ||||||| ||||    
T  23052595 cacttaggttggcctggtggtattggcttgggacttgggagtgtgct 23052549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 253
Target Start/End: Complemental strand, 12086194 - 12086149
Alignment:
Q  208 gttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    |||||||||||||||||||||||||| |||| ||| ||||| ||||    
T  12086194 gttggcctggtggtattggcttgggacctggaagtgtgctcctcct 12086149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 16381726 - 16381685
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagt 242  Q
    ||||||||||||||| ||||||| ||||||||||||| ||||    
T  16381726 cacttgggttggcctagtggtataggcttgggatctgagagt 16381685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 1729820 - 1729872
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    |||||||||||| || |||||||||||||||||  ||||||| ||||| ||||    
T  1729820 cacttgggttgggctagtggtattggcttgggacttgggagtgtgctcctcct 1729872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 252
Target Start/End: Original strand, 2144452 - 2144500
Alignment:
Q  204 ttgggttggcctggtggtattggcttgggatctgggagtctgctcttcc 252  Q
    ||||||||  ||||||||||||||||||||| ||||||| || ||||||    
T  2144452 ttgggttgatctggtggtattggcttgggatatgggagtgtgttcttcc 2144500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 7667541 - 7667485
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgag 257  Q
    |||||||||||| | |||| |||||||||||||  ||||||| ||||| ||||||||    
T  7667541 cacttgggttggtcgggtgatattggcttgggacttgggagtgtgctcctccttgag 7667485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 30359658 - 30359710
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||| ||||||| ||||||||||| || ||||| ||||| ||||    
T  30359658 cacttgggttggcttggtggtgttggcttgggaccttggagtgtgctcctcct 30359710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 34041660 - 34041608
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||||| ||||||||| ||| ||||||| |||| ||||| ||||    
T  34041660 cacttgggttggcctagtggtattgacttaggatctgagagtgtgctcctcct 34041608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 41705 - 41646
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    ||||||||||||||| |||||||||||||| |||||| |||| ||||| |||| ||||||    
T  41705 cacttgggttggcctagtggtattggcttgagatctgagagtatgctcctcctcgaggtc 41646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 112286 - 112345
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    |||||||||||||||||| |||||||||||| |||||||||| || || || ||||||||    
T  112286 cacttgggttggcctggttgtattggcttggaatctgggagtgtggtcctctttgaggtc 112345  T

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Target: scaffold1367 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 203 - 253
Target Start/End: Complemental strand, 910 - 860
Alignment:
Q  203 cttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    |||||| ||||||||||||||||||||||||||||||| | ||||| ||||    
T  910 cttggggtggcctggtggtattggcttgggatctgggaatgtgctcctcct 860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 10223 - 10264
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagt 242  Q
    |||||||||||||||| || ||||||||||||||||||||||    
T  10223 cacttgggttggcctgatgatattggcttgggatctgggagt 10264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 13119 - 13066
Alignment:
Q  200 tcacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    |||||| ||||||| |||||||||||||||| ||||||||||| ||||| ||||    
T  13119 tcacttcggttggcttggtggtattggcttgagatctgggagtgtgctcctcct 13066  T

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Target: scaffold0021 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 260
Target Start/End: Complemental strand, 157056 - 157000
Alignment:
Q  204 ttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtc 260  Q
    |||||||| |||| ||||||||||||| ||||||||||| ||||| |||| ||||||    
T  157056 ttgggttgacctgttggtattggcttgagatctgggagtgtgctcctcctcgaggtc 157000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 95043 - 94991
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||||| ||||||||||||||| | |||||||| ||||| ||||    
T  95043 cacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcct 94991  T

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Target: scaffold0070 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 248
Target Start/End: Complemental strand, 38974 - 38927
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagtctgctc 248  Q
    |||||||||||| |||||||||||||||||||| || ||||| |||||    
T  38974 cacttgggttggtctggtggtattggcttgggacctaggagtatgctc 38927  T

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Target: scaffold0070; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 42589 - 42540
Alignment:
Q  204 ttgggttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    |||||||||||| ||||||||| ||||| |||||||||| ||||| ||||    
T  42589 ttgggttggcctagtggtattgacttggaatctgggagtatgctcctcct 42540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 32841 - 32803
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctggg 239  Q
    ||||||||||||||||||||||||||||  |||||||||    
T  32841 cacttgggttggcctggtggtattggctgaggatctggg 32803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 253
Target Start/End: Complemental strand, 15842 - 15797
Alignment:
Q  208 gttggcctggtggtattggcttgggatctgggagtctgctcttcct 253  Q
    ||||||||||||||||||||||||||| | ||||| ||||| ||||    
T  15842 gttggcctggtggtattggcttgggattttggagtatgctcctcct 15797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 47386 - 47427
Alignment:
Q  201 cacttgggttggcctggtggtattggcttgggatctgggagt 242  Q
    |||||||||| |||| ||||||||||||| ||||||||||||    
T  47386 cacttgggtttgccttgtggtattggcttaggatctgggagt 47427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0955 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0955
Description:

Target: scaffold0955; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 3467 - 3499
Alignment:
Q  201 cacttgggttggcctggtggtattggcttggga 233  Q
    |||||||||||||| ||||||||||||||||||    
T  3467 cacttgggttggccgggtggtattggcttggga 3499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 268
Target Start/End: Complemental strand, 43401 - 43337
Alignment:
Q  204 ttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtcccatgttc 268  Q
    |||||||||| |||||||||||||||||||  ||||||| || || | ||| ||||| |||||||    
T  43401 ttgggttggcatggtggtattggcttgggacttgggagtgtgttccttcttaaggtctcatgttc 43337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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