View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0028Eco27 (Length: 82)
Name: NF0028Eco27
Description: NF0028-1
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0028Eco27 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 72; Significance: 2e-33; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 72; E-Value: 2e-33
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 29781348 - 29781423
Alignment:
| Q |
7 |
aaaagaggaatattcaagggtagatgccaacaaatttgttcatgaatgcaaacaaagaatgacacatctttcatgc |
82 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
29781348 |
aaaagaggaatattcaagggtagatgccaacaaatttgttcatgaatgcaaactaagaatgacacatctttcatgc |
29781423 |
T |
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