View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0028_low_2 (Length: 550)

Name: NF0028_low_2
Description: NF0028
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0028_low_2
NF0028_low_2
[»] chr4 (15 HSPs)
chr4 (1-421)||(41860443-41860863)
chr4 (1-421)||(52681467-52681887)
chr4 (47-288)||(30576448-30576688)
chr4 (264-418)||(15056967-15057124)
chr4 (161-257)||(14991327-14991423)
chr4 (239-285)||(47964110-47964156)
chr4 (415-451)||(41861939-41861975)
chr4 (415-451)||(41862030-41862066)
chr4 (415-451)||(41862121-41862157)
chr4 (415-451)||(41862212-41862248)
chr4 (415-451)||(41862403-41862439)
chr4 (415-451)||(41946638-41946674)
chr4 (415-451)||(41946729-41946765)
chr4 (415-451)||(52680359-52680395)
chr4 (415-451)||(53285696-53285732)
[»] chr8 (2 HSPs)
chr8 (1-421)||(14995050-14995470)
chr8 (415-451)||(22732207-22732243)
[»] chr7 (11 HSPs)
chr7 (1-421)||(22005714-22006134)
chr7 (1-421)||(7892490-7892910)
chr7 (30-422)||(3598843-3599241)
chr7 (164-283)||(13604144-13604262)
chr7 (415-451)||(3600149-3600185)
chr7 (415-451)||(5090967-5091003)
chr7 (415-451)||(7891382-7891418)
chr7 (415-451)||(13927440-13927476)
chr7 (415-451)||(22004323-22004359)
chr7 (415-451)||(22004514-22004550)
chr7 (415-451)||(22004605-22004641)
[»] chr6 (1 HSPs)
chr6 (1-421)||(3590335-3590755)
[»] chr5 (7 HSPs)
chr5 (1-421)||(32674006-32674426)
chr5 (225-421)||(22636691-22636891)
chr5 (190-283)||(21122329-21122422)
chr5 (415-451)||(20844506-20844542)
chr5 (415-451)||(23179540-23179576)
chr5 (415-451)||(23179631-23179667)
chr5 (415-451)||(32672891-32672927)
[»] chr3 (15 HSPs)
chr3 (1-421)||(18200483-18200903)
chr3 (1-421)||(26950254-26950674)
chr3 (1-421)||(36092373-36092793)
chr3 (197-283)||(12807577-12807663)
chr3 (190-277)||(14458470-14458557)
chr3 (415-451)||(854976-855012)
chr3 (415-451)||(6953291-6953327)
chr3 (415-451)||(6953430-6953466)
chr3 (415-451)||(6953812-6953848)
chr3 (415-451)||(18199352-18199388)
chr3 (415-451)||(36093873-36093909)
chr3 (415-451)||(36093964-36094000)
chr3 (415-451)||(36947725-36947761)
chr3 (415-451)||(36947864-36947900)
chr3 (415-451)||(36948003-36948039)
[»] chr2 (9 HSPs)
chr2 (1-421)||(13906996-13907416)
chr2 (3-421)||(26454641-26455059)
chr2 (1-421)||(40604478-40604898)
chr2 (415-451)||(32287325-32287361)
chr2 (415-451)||(13899908-13899944)
chr2 (415-451)||(13905806-13905842)
chr2 (415-451)||(26453534-26453570)
chr2 (415-451)||(35433139-35433175)
chr2 (415-451)||(40603369-40603405)
[»] chr1 (8 HSPs)
chr1 (1-421)||(35595520-35595940)
chr1 (1-421)||(2045819-2046239)
chr1 (156-223)||(52589715-52589782)
chr1 (415-451)||(2051974-2052010)
chr1 (415-451)||(39514207-39514243)
chr1 (415-451)||(45507254-45507290)
chr1 (415-451)||(45507403-45507439)
chr1 (415-451)||(49791612-49791648)
[»] scaffold0121 (3 HSPs)
scaffold0121 (415-451)||(41422-41458)
scaffold0121 (415-451)||(41240-41276)
scaffold0121 (415-451)||(41331-41367)
[»] scaffold0160 (1 HSPs)
scaffold0160 (415-451)||(36132-36168)


Alignment Details
Target: chr4 (Bit Score: 389; Significance: 0; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 389; E-Value: 0
Query Start/End: Original strand, 1 - 421
Target Start/End: Original strand, 41860443 - 41860863
Alignment:
Q  1 tgtagtttgcatagttcatgggacatctaagacacagtcacatcagtttaatcaaccaccaccgtataaattatcaccgcgagggccttcttgcaacaac 100  Q
    |||||||||||||| ||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41860443 tgtagtttgcatagctcaggggatatctaagacacagtcacatcagtataatcaaccaccaccgtataaattatcaccgcgagggccttcttgcaacaac 41860542  T
Q  101 caccaccgcataaacctccttctagaatataacaaaccgaaaaagagatgataataaattagatagcaatgcaattcaaaaagtcatcggattacaaata 200  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41860543 caccaccgcataaacctccttctagaatataacaaacaaaaaaagagatgataataaattagatagcaatgcaattcaaaaagtcatcggattacaaata 41860642  T
Q  201 accaaaaatcaaactaaacaaatgctcctactcttattccaaccccgaatttgaaaattcctgaactgcaaaatcaacaaaccaaaccccacaccaatca 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41860643 accaaaaatcaaactaaacaaatgctcctactcttattccaaccccgaatttgaaaattcctgaactgcaaaatcaacaaaccaaaccccacaccaatca 41860742  T
Q  301 tataacaattactttgattttgtaagaagcctaaaaagctattgcaagctattttgtacaatagaggaattgaatggaaagaaagatgtgtggttaacct 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41860743 tataacaattactttgattttgtaagaagcctaaaaagctattgcaagctattttgtacaatagaggaattgaatggaaagaaagatgtgtggttaacct 41860842  T
Q  401 tagtcacaaagaagaggagga 421  Q
    |||||||| | ||||||||||    
T  41860843 tagtcacagaaaagaggagga 41860863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 357; E-Value: 0
Query Start/End: Original strand, 1 - 421
Target Start/End: Complemental strand, 52681887 - 52681467
Alignment:
Q  1 tgtagtttgcatagttcatgggacatctaagacacagtcacatcagtttaatcaaccaccaccgtataaattatcaccgcgagggccttcttgcaacaac 100  Q
    |||||||||||||| ||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52681887 tgtagtttgcatagctcaggggatatctaagacacagtcacatcagtataatcaaccaccaccgtataaattatcaccgcgagggccttcttgcaacaac 52681788  T
Q  101 caccaccgcataaacctccttctagaatataacaaaccgaaaaagagatgataataaattagatagcaatgcaattcaaaaagtcatcggattacaaata 200  Q
    |||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  52681787 caccaccgcataaatctccttctagaatataacaaacaaaaaaagagatgataataaattagatagcaatccaattcaaaaagtcatcggattacaaata 52681688  T
Q  201 accaaaaatcaaactaaacaaatgctcctactcttattccaaccccgaatttgaaaattcctgaactgcaaaatcaacaaaccaaaccccacaccaatca 300  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |    
T  52681687 accaaaaatcaaactaaacaaatgctcatactcttatttcaaccccgaatttgaaaattcctgaattgcaaaatcaacaaactaaaccccacaccaatta 52681588  T
Q  301 tataacaattactttgattttgtaagaagcctaaaaagctattgcaagctattttgtacaatagaggaattgaatggaaagaaagatgtgtggttaacct 400  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52681587 tataacaattactttgattttgtaagaagcctaaaaagctgttgcaagctattttgtacaatagaggaattgaatggaaagaaagatgtgtggttaacct 52681488  T
Q  401 tagtcacaaagaagaggagga 421  Q
    |||||||| | ||||||||||    
T  52681487 tagtcacagaaaagaggagga 52681467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 47 - 288
Target Start/End: Original strand, 30576448 - 30576688
Alignment:
Q  47 tttaatcaaccaccaccgtataaattatcaccgcgagggccttcttgcaac-------aaccaccaccgcataaacctccttctagaatataacaaaccg 139  Q
    |||| |||||||||||| ||||||| |||| |||  ||||||||||||||        ||||||| ||||||||||||| |||||||| |||            
T  30576448 tttattcaaccaccaccatataaatcatcagcgcaggggccttcttgcaagttacgaaaaccaccgccgcataaacctcgttctagaaaatat------- 30576540  T
Q  140 aaaaagagatgataataaattagatagcaatgcaattcaaaaagtcatcggattacaaataaccaaaaatcaaactaaacaaatgctcctactcttattc 239  Q
     |||||||||| |||||||||||||| ||||| |||||||||| || ||| |||||||||||| ||||||| || |||||||| |||| | |||||||||    
T  30576541 -aaaagagatggtaataaattagataacaatgaaattcaaaaactcgtcgaattacaaataacaaaaaatccaattaaacaaaagctcttgctcttattc 30576639  T
Q  240 caaccccgaatttgaaaattcctgaactgcaaaatcaacaaaccaaacc 288  Q
    ||||| | | |||| ||||| ||  |||||||||| |||||||||||||    
T  30576640 caaccgccattttggaaatttctctactgcaaaatgaacaaaccaaacc 30576688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 418
Target Start/End: Complemental strand, 15057124 - 15056967
Alignment:
Q  264 aactgcaaaatcaacaaaccaaaccccacaccaatcatat----aacaattactttgattttgtaagaagcctaaaaagctattgcaagctattttgtac 359  Q
    |||| ||||||||||| ||||||||  ||| |||||||||    ||||||||| ||||||||  |||||  |||| |||||||||||| |||||||| ||    
T  15057124 aactccaaaatcaacataccaaacct-acaacaatcatatgaacaacaattacgttgattttaaaagaaatctaagaagctattgcaatctattttgaac 15057026  T
Q  360 aatagaggaattgaatggaaagaaagatgtgtggttaaccttagtcacaaagaagagga 418  Q
    || | |||||||||| |  || ||||||  |||||||| ||| ||||| ||||||||||    
T  15057025 aacaaaggaattgaaagagaataaagatacgtggttaaacttggtcacgaagaagagga 15056967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 257
Target Start/End: Complemental strand, 14991423 - 14991327
Alignment:
Q  161 agatagcaatgcaattcaaaaagtcatcggattacaaataaccaaaaatcaaactaaacaaatgctcctactcttattccaaccccgaatttgaaaa 257  Q
    |||||||||||||||||| ||  |||||  | |||||||||||||| |||||| |||||||||  |   ||||||||| ||||||| |||| |||||    
T  14991423 agatagcaatgcaattcagaatctcatcataatacaaataaccaaagatcaaattaaacaaatattttcactcttattacaacccccaattagaaaa 14991327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 239 - 285
Target Start/End: Original strand, 47964110 - 47964156
Alignment:
Q  239 ccaaccccgaatttgaaaattcctgaactgcaaaatcaacaaaccaa 285  Q
    |||||||| ||||||||||||| | ||||| ||||||||||||||||    
T  47964110 ccaacccctaatttgaaaattcataaactgtaaaatcaacaaaccaa 47964156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Original strand, 41861939 - 41861975
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  41861939 aggaggagggaaattaggaaatcatggttagggtttg 41861975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Original strand, 41862030 - 41862066
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  41862030 aggaggagggaaattaggaaatcatggttagggtttg 41862066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Original strand, 41862121 - 41862157
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  41862121 aggaggagggaaattaggaaatcatggttagggtttg 41862157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Original strand, 41862212 - 41862248
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  41862212 aggaggagggaaattaggaaatcatggttagggtttg 41862248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Original strand, 41862403 - 41862439
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  41862403 aggaggagggaaattaggaaatcatggttagggtttg 41862439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Original strand, 41946638 - 41946674
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  41946638 aggaggagggaaattaggaaatcatggttagggtttg 41946674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Original strand, 41946729 - 41946765
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  41946729 aggaggagggaaattaggaaatcatggttagggtttg 41946765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Complemental strand, 52680395 - 52680359
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  52680395 aggaggagggaaattaggaaatcatggttagggtttg 52680359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Complemental strand, 53285732 - 53285696
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  53285732 aggaggagtgaaattaggaaatcatggttagggtttg 53285696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 385; Significance: 0; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 385; E-Value: 0
Query Start/End: Original strand, 1 - 421
Target Start/End: Original strand, 14995050 - 14995470
Alignment:
Q  1 tgtagtttgcatagttcatgggacatctaagacacagtcacatcagtttaatcaaccaccaccgtataaattatcaccgcgagggccttcttgcaacaac 100  Q
    |||||||||||||| ||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14995050 tgtagtttgcatagctcaggggatatcaaagacacagtcacatcagtttaatcaaccaccaccgtataaattatcaccacgagggccttcttgcaacaac 14995149  T
Q  101 caccaccgcataaacctccttctagaatataacaaaccgaaaaagagatgataataaattagatagcaatgcaattcaaaaagtcatcggattacaaata 200  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  14995150 caccaccgcataaacctccttctagaatataacaaacaaaaaaagagatgataataaattagatagcaatgcaattcaaacagtcatcggattacaaata 14995249  T
Q  201 accaaaaatcaaactaaacaaatgctcctactcttattccaaccccgaatttgaaaattcctgaactgcaaaatcaacaaaccaaaccccacaccaatca 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14995250 accaaaaatcaaactaaacaaatgctcctactcttattccaaccccgaatttgaaaattcctgaactgcaaaatcaacaaaccaaaccccacaccaatca 14995349  T
Q  301 tataacaattactttgattttgtaagaagcctaaaaagctattgcaagctattttgtacaatagaggaattgaatggaaagaaagatgtgtggttaacct 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14995350 tataacaattactttgattttgtaagaagcctaaaaagctattgcaagctattttgtacaatagaggaattgaatggaaagaaagatgtgtggttaacct 14995449  T
Q  401 tagtcacaaagaagaggagga 421  Q
    |||||||||| ||||||||||    
T  14995450 tagtcacaaaaaagaggagga 14995470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Original strand, 22732207 - 22732243
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  22732207 aggaggagtgaaattaggaaatcatggttagggtttg 22732243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 381; Significance: 0; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 381; E-Value: 0
Query Start/End: Original strand, 1 - 421
Target Start/End: Complemental strand, 22006134 - 22005714
Alignment:
Q  1 tgtagtttgcatagttcatgggacatctaagacacagtcacatcagtttaatcaaccaccaccgtataaattatcaccgcgagggccttcttgcaacaac 100  Q
    |||||||||||||| ||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22006134 tgtagtttgcatagctcaggggatatctaagacacagtcacatcagtataatcaaccaccaccgtataaattatcaccgcgagggccttcttgcaacaac 22006035  T
Q  101 caccaccgcataaacctccttctagaatataacaaaccgaaaaagagatgataataaattagatagcaatgcaattcaaaaagtcatcggattacaaata 200  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22006034 caccaccgcataaacctccttctagaatataacaaacaaaaaaagagatgataataaattagatagcaatgcaattcaaaaagtcatcggattacaaata 22005935  T
Q  201 accaaaaatcaaactaaacaaatgctcctactcttattccaaccccgaatttgaaaattcctgaactgcaaaatcaacaaaccaaaccccacaccaatca 300  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  22005934 accaaaaatcaaactaaacaaatgctcctactcttatttcaaccccgaatttgaaaattcctgaactgcaaaatcaaaaaaccaaaccccacaccaatca 22005835  T
Q  301 tataacaattactttgattttgtaagaagcctaaaaagctattgcaagctattttgtacaatagaggaattgaatggaaagaaagatgtgtggttaacct 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22005834 tataacaattactttgattttgtaagaagcctaaaaagctattgcaagctattttgtacaatagaggaattgaatggaaagaaagatgtgtggttaacct 22005735  T
Q  401 tagtcacaaagaagaggagga 421  Q
    |||||||| | ||||||||||    
T  22005734 tagtcacagaaaagaggagga 22005714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 373; E-Value: 0
Query Start/End: Original strand, 1 - 421
Target Start/End: Complemental strand, 7892910 - 7892490
Alignment:
Q  1 tgtagtttgcatagttcatgggacatctaagacacagtcacatcagtttaatcaaccaccaccgtataaattatcaccgcgagggccttcttgcaacaac 100  Q
    |||||||||||||| ||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7892910 tgtagtttgcatagctcaggggatatctaagacacagtcacatcagtataatcaaccaccaccgtataaattatcaccgcgagggccttcttgcaacaac 7892811  T
Q  101 caccaccgcataaacctccttctagaatataacaaaccgaaaaagagatgataataaattagatagcaatgcaattcaaaaagtcatcggattacaaata 200  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  7892810 caccaccgcataaacctccttctagaatataacaaacaaaaaaagagatgataataaattagatagcaatccaattcaaaaagtcatcggattacaaata 7892711  T
Q  201 accaaaaatcaaactaaacaaatgctcctactcttattccaaccccgaatttgaaaattcctgaactgcaaaatcaacaaaccaaaccccacaccaatca 300  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7892710 accaaaaatcaaactaaacaaatgctcatactcttatttcaaccccgaatttgaaaattcctgaactgcaaaatcaacaaaccaaaccccacaccaatca 7892611  T
Q  301 tataacaattactttgattttgtaagaagcctaaaaagctattgcaagctattttgtacaatagaggaattgaatggaaagaaagatgtgtggttaacct 400  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7892610 tataacaattactttgattttgtaagaagcctaaaaagctgttgcaagctattttgtacaatagaggaattgaatggaaagaaagatgtgtggttaacct 7892511  T
Q  401 tagtcacaaagaagaggagga 421  Q
    |||||||| | ||||||||||    
T  7892510 tagtcacagaaaagaggagga 7892490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 30 - 422
Target Start/End: Original strand, 3598843 - 3599241
Alignment:
Q  30 agacacagtcacatcagtttaatcaaccaccaccgtataaattatcaccgcgagggccttcttgcaacaaccaccaccgcataaacctccttcta----- 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||         
T  3598843 agacacagtcacatcagtttaatcaaccaccaccgtataaattatcatcgcgagggccttcttgcaacaaccaccaccgcataaacctccttctagatct 3598942  T
Q  125 -gaatataacaaaccgaaaaagagatgataataaattagatagcaatgcaattcaaaaagtcatcggattacaaataaccaaaaatcaaactaaacaaat 223  Q
     |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  3598943 agaatataacaaacaaaaaaagagatgataataaattagatagcaatgcaattcaaaaagtcatcgaaatacaaataaccaaaaatcaaactaaacaaat 3599042  T
Q  224 gctcctactcttattccaaccccgaatttgaaaattcctgaactgcaaaatcaacaaaccaaaccccacaccaatcatataacaattactttgattttgt 323  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3599043 gctcccactcttattccaaccccgaatttgaaaattcctgaactacaaaatcaacaaaccaaaccccacaccaatcatataacaattactttgattttgt 3599142  T
Q  324 aagaagcctaaaaagctattgcaagctattttgtacaatagaggaattgaatggaaagaaagatgtgtggttaaccttagtcacaaagaagaggaggat 422  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||    
T  3599143 aagaagcctaaaaagctattgcaagctattttgtacaatagaggaattgaatgtaaagaaagatgtgtggttaaccttagtcacagataagaggaggat 3599241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 283
Target Start/End: Original strand, 13604144 - 13604262
Alignment:
Q  164 tagcaatgcaattcaaaaagtcatcggattacaaataaccaaaaatcaaactaaacaaatgctcctactcttattccaaccccgaatttgaaaattcctg 263  Q
    ||||||| ||||| ||| | ||| | |||||| ||||||||||||||||| |||||||||| |  |||||||||   |||||| ||||||||||||| |     
T  13604144 tagcaatacaatttaaacactcaccagattacgaataaccaaaaatcaaattaaacaaatgttattactcttatcttaacccctaatttgaaaattcat- 13604242  T
Q  264 aactgcaaaatcaacaaacc 283  Q
    || || ||||||||||||||    
T  13604243 aaatgtaaaatcaacaaacc 13604262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Original strand, 3600149 - 3600185
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  3600149 aggaggagggaaattaggaaatcatggttagggtttg 3600185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Complemental strand, 5091003 - 5090967
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  5091003 aggaggagtgaaattaggaaatcatggttagggtttg 5090967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Complemental strand, 7891418 - 7891382
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  7891418 aggaggagggaaattaggaaatcatggttagggtttg 7891382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Complemental strand, 13927476 - 13927440
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  13927476 aggaggagggaaattaggaaatcatggttagggtttg 13927440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Complemental strand, 22004359 - 22004323
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  22004359 aggaggagggaaattaggaaatcatggttagggtttg 22004323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Complemental strand, 22004550 - 22004514
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  22004550 aggaggagggaaattaggaaatcatggttagggtttg 22004514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Complemental strand, 22004641 - 22004605
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  22004641 aggaggagggaaattaggaaatcatggttagggtttg 22004605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 381; Significance: 0; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 381; E-Value: 0
Query Start/End: Original strand, 1 - 421
Target Start/End: Complemental strand, 3590755 - 3590335
Alignment:
Q  1 tgtagtttgcatagttcatgggacatctaagacacagtcacatcagtttaatcaaccaccaccgtataaattatcaccgcgagggccttcttgcaacaac 100  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3590755 tgtagtttgcatagctcaggggacatctaagacacagtcacatcagtttaatcaaccaccaccgtataaattatcaccgcgagggccttcttgcaacaac 3590656  T
Q  101 caccaccgcataaacctccttctagaatataacaaaccgaaaaagagatgataataaattagatagcaatgcaattcaaaaagtcatcggattacaaata 200  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3590655 caccaccgcataaacctccttctagaatataacaaacaaaaaaagagatgataataaattagatagcaatgcaattcaaaaagtcatcggattacaaata 3590556  T
Q  201 accaaaaatcaaactaaacaaatgctcctactcttattccaaccccgaatttgaaaattcctgaactgcaaaatcaacaaaccaaaccccacaccaatca 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3590555 accaaaaatcaaactaaacaaatgctcctactcttattccaaccccgaatttgaaaattgctgaactgcaaaatcaacaaaccaaaccccacaccaatca 3590456  T
Q  301 tataacaattactttgattttgtaagaagcctaaaaagctattgcaagctattttgtacaatagaggaattgaatggaaagaaagatgtgtggttaacct 400  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  3590455 tataacaattactttgattttgtaagaagtctaaaaagctattgcaagctattttgtacaatagaggaattgaatagagagaaagatgtgtggttaacct 3590356  T
Q  401 tagtcacaaagaagaggagga 421  Q
    |||||||| | ||||||||||    
T  3590355 tagtcacataaaagaggagga 3590335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 381; Significance: 0; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 381; E-Value: 0
Query Start/End: Original strand, 1 - 421
Target Start/End: Complemental strand, 32674426 - 32674006
Alignment:
Q  1 tgtagtttgcatagttcatgggacatctaagacacagtcacatcagtttaatcaaccaccaccgtataaattatcaccgcgagggccttcttgcaacaac 100  Q
    |||||||||||||| ||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32674426 tgtagtttgcatagctcaggggatatctaagacacagtcacatcagtataatcaaccaccaccgtataaattatcaccgcgagggccttcttgcaacaac 32674327  T
Q  101 caccaccgcataaacctccttctagaatataacaaaccgaaaaagagatgataataaattagatagcaatgcaattcaaaaagtcatcggattacaaata 200  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32674326 caccaccgcataaacctccttctagaatataacaaacaaaaaaagagatgataataaattagatagcaatgcaattcaaaaagtcatcggattacaaata 32674227  T
Q  201 accaaaaatcaaactaaacaaatgctcctactcttattccaaccccgaatttgaaaattcctgaactgcaaaatcaacaaaccaaaccccacaccaatca 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  32674226 accaaaaatcaaactaaacaaatgctcctactcttattccaaccccgaatttgaaaattcctgaattgcaaaatcaacaaaccaaaccccacaccaatca 32674127  T
Q  301 tataacaattactttgattttgtaagaagcctaaaaagctattgcaagctattttgtacaatagaggaattgaatggaaagaaagatgtgtggttaacct 400  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32674126 tataacaattactttgattttgtaagaagcctaaaaagctattgcaagttattttgtacaatagaggaattgaatggaaagaaagatgtgtggttaacct 32674027  T
Q  401 tagtcacaaagaagaggagga 421  Q
    |||||||| | ||||||||||    
T  32674026 tagtcacagaaaagaggagga 32674006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 225 - 421
Target Start/End: Original strand, 22636691 - 22636891
Alignment:
Q  225 ctcctactcttattccaaccccgaatttgaaaattcctgaactgcaaaatcaacaaaccaaaccccacaccaatcatat----aacaattactttgattt 320  Q
    ||||||||||| |||||||| | |||||||||| || | ||||||||||||||||||| ||||||||||||||||||||    |||||||||||||||||    
T  22636691 ctcctactctttttccaaccaccaatttgaaaactcataaactgcaaaatcaacaaacaaaaccccacaccaatcatatgaacaacaattactttgattt 22636790  T
Q  321 tgtaagaagcctaaaaagctattgcaagctattttgtacaatagaggaattgaatggaaagaaagatgtgtggttaaccttagtcacaaagaagaggagg 420  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||| || ||||||||||||||||  |||||||||||    
T  22636791 tgtaagaagcctaaaaagctattgcaagctattttgaacaaaagaggaattgaacggaaagaaagatatgcggttaaccttagtcacggagaagaggagg 22636890  T
Q  421 a 421  Q
    |    
T  22636891 a 22636891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 190 - 283
Target Start/End: Complemental strand, 21122422 - 21122329
Alignment:
Q  190 gattacaaataaccaaaaatcaaactaaacaaatgctcctactcttattccaaccccgaatttgaaaattcctgaactgcaaaatcaacaaacc 283  Q
    |||||| ||||||||||||| ||| ||||||||||||  |||||||||   |||||| ||||| ||||||| |  || | ||||||||||||||    
T  21122422 gattacgaataaccaaaaataaaattaaacaaatgctattactcttatcttaacccctaatttaaaaattcatagaccgtaaaatcaacaaacc 21122329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Complemental strand, 20844542 - 20844506
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  20844542 aggaggagggaaattaggaaatcatggttagggtttg 20844506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Complemental strand, 23179576 - 23179540
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  23179576 aggaggagggaaattaggaaatcatggttagggtttg 23179540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Complemental strand, 23179667 - 23179631
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  23179667 aggaggagggaaattaggaaatcatggttagggtttg 23179631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Complemental strand, 32672927 - 32672891
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  32672927 aggaggagggaaattaggaaatcatggttagggtttg 32672891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 381; Significance: 0; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 381; E-Value: 0
Query Start/End: Original strand, 1 - 421
Target Start/End: Complemental strand, 18200903 - 18200483
Alignment:
Q  1 tgtagtttgcatagttcatgggacatctaagacacagtcacatcagtttaatcaaccaccaccgtataaattatcaccgcgagggccttcttgcaacaac 100  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18200903 tgtagtttgcatagctcaggggacatctaagacacagtcacatcagtttaatcaaccaccaccgtataaattatcaccgcgagggccttcttgcaacaac 18200804  T
Q  101 caccaccgcataaacctccttctagaatataacaaaccgaaaaagagatgataataaattagatagcaatgcaattcaaaaagtcatcggattacaaata 200  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18200803 caccaccgcataaacctccttctagaatataacaaacaaaaaaagagatgataataaattagatagcaatgcaattcaaaaagtcatcggattacaaata 18200704  T
Q  201 accaaaaatcaaactaaacaaatgctcctactcttattccaaccccgaatttgaaaattcctgaactgcaaaatcaacaaaccaaaccccacaccaatca 300  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18200703 accaaaaatcaaactaaacaaatgctcctattcttattccaaccccaaatttgaaaattcctgaactgcaaaatcaacaaaccaaaccccacaccaatca 18200604  T
Q  301 tataacaattactttgattttgtaagaagcctaaaaagctattgcaagctattttgtacaatagaggaattgaatggaaagaaagatgtgtggttaacct 400  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18200603 tataacaattactttgattttgtaagaagtctaaaaagctattgcaagctattttgtacaatagaggaattgaatggagagaaagatgtgtggttaacct 18200504  T
Q  401 tagtcacaaagaagaggagga 421  Q
    |||||||| | ||||||||||    
T  18200503 tagtcacataaaagaggagga 18200483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 377; E-Value: 0
Query Start/End: Original strand, 1 - 421
Target Start/End: Complemental strand, 26950674 - 26950254
Alignment:
Q  1 tgtagtttgcatagttcatgggacatctaagacacagtcacatcagtttaatcaaccaccaccgtataaattatcaccgcgagggccttcttgcaacaac 100  Q
    |||||||||||||| ||| |||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26950674 tgtagtttgcatagctcaggggatatctaagacatagtcacatcagtataatcaaccaccaccgtataaattatcaccgcgagggccttcttgcaacaac 26950575  T
Q  101 caccaccgcataaacctccttctagaatataacaaaccgaaaaagagatgataataaattagatagcaatgcaattcaaaaagtcatcggattacaaata 200  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  26950574 caccaccgcataaacctccttctagaatataacaaacaaaaaaagagatgataataaattagataacaatgcaattcaaaaagtcatcggattacaaata 26950475  T
Q  201 accaaaaatcaaactaaacaaatgctcctactcttattccaaccccgaatttgaaaattcctgaactgcaaaatcaacaaaccaaaccccacaccaatca 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26950474 accaaaaatcaaactaaacaaatgctcctactcttattccaaccccgaatttgaaaattcctgaactgcaaaatcaacaaaccaaaccccacaccaatca 26950375  T
Q  301 tataacaattactttgattttgtaagaagcctaaaaagctattgcaagctattttgtacaatagaggaattgaatggaaagaaagatgtgtggttaacct 400  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26950374 tataacaattactttgattttgtaagaagcctaaaaagctattgcaagctattttgtacaatagaggaattgaatgcaaagaaagatgtgtggttaacct 26950275  T
Q  401 tagtcacaaagaagaggagga 421  Q
    |||||||| | ||||||||||    
T  26950274 tagtcacagaaaagaggagga 26950254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 1 - 421
Target Start/End: Original strand, 36092373 - 36092793
Alignment:
Q  1 tgtagtttgcatagttcatgggacatctaagacacagtcacatcagtttaatcaaccaccaccgtataaattatcaccgcgagggccttcttgcaacaac 100  Q
    |||||||||||||| ||| |||| |||||||||||| |||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  36092373 tgtagtttgcatagctcaggggatatctaagacacaatcacattagtataatcaaccaccactgtataaattatcaccgcgagggccttcttgcaacaac 36092472  T
Q  101 caccaccgcataaacctccttctagaatataacaaaccgaaaaagagatgataataaattagatagcaatgcaattcaaaaagtcatcggattacaaata 200  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  36092473 caccaccgcataaacctccttctagaatataacaaacaaaaaaagagatgataataaattagatagcaatgcaattcaaaaagtcatcagattacaaata 36092572  T
Q  201 accaaaaatcaaactaaacaaatgctcctactcttattccaaccccgaatttgaaaattcctgaactgcaaaatcaacaaaccaaaccccacaccaatca 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  36092573 accaaaaatcaaactaaacaaatgctcctactcttattccaaccccgaatttgaaaattcatgaactgcaaaatcaacaaaccaaaccccacaccaatca 36092672  T
Q  301 tataacaattactttgattttgtaagaagcctaaaaagctattgcaagctattttgtacaatagaggaattgaatggaaagaaagatgtgtggttaacct 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36092673 tataacaattactttgattttgtaagaagcctaaaaagctattgcaagctattttgtacaatagaggaattgaatggaaagaaagatgtgtggttaacct 36092772  T
Q  401 tagtcacaaagaagaggagga 421  Q
    |||||||| | ||||||||||    
T  36092773 tagtcacagaaaagaggagga 36092793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 197 - 283
Target Start/End: Original strand, 12807577 - 12807663
Alignment:
Q  197 aataaccaaaaatcaaactaaacaaatgctcctactcttattccaaccccgaatttgaaaattcctgaactgcaaaatcaacaaacc 283  Q
    ||||||||||||||||| |||||||||| |  |||||||||   |||||| ||||||||||||| | ||||| ||||||||||||||    
T  12807577 aataaccaaaaatcaaattaaacaaatgttattactcttatcttaacccctaatttgaaaattcataaactgtaaaatcaacaaacc 12807663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 277
Target Start/End: Original strand, 14458470 - 14458557
Alignment:
Q  190 gattacaaataaccaaaaatcaaactaaacaaatgctcctactcttattccaaccccgaatttgaaaattcctgaactgcaaaatcaa 277  Q
    |||||| ||| ||||||||| ||| ||||||||||||  |||||||||   ||| || ||||||||||||| | ||||| ||||||||    
T  14458470 gattacgaattaccaaaaataaaattaaacaaatgctattactcttatcttaactcctaatttgaaaattcataaactgtaaaatcaa 14458557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Complemental strand, 855012 - 854976
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  855012 aggaggagggaaattaggaaatcatggttagggtttg 854976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Original strand, 6953291 - 6953327
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  6953291 aggaggagggaaattaggaaatcatggttagggtttg 6953327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Original strand, 6953430 - 6953466
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  6953430 aggaggagggaaattaggaaatcatggttagggtttg 6953466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Original strand, 6953812 - 6953848
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  6953812 aggaggagggaaattaggaaatcatggttagggtttg 6953848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Complemental strand, 18199388 - 18199352
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  18199388 aggaggagggaaattaggaaatcatggttagggtttg 18199352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Original strand, 36093873 - 36093909
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  36093873 aggaggagggaaattaggaaatcatggttagggtttg 36093909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Original strand, 36093964 - 36094000
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  36093964 aggaggagggaaattaggaaatcatggttagggtttg 36094000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Original strand, 36947725 - 36947761
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  36947725 aggaggagggaaattaggaaatcatggttagggtttg 36947761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Original strand, 36947864 - 36947900
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  36947864 aggaggagggaaattaggaaatcatggttagggtttg 36947900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Original strand, 36948003 - 36948039
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  36948003 aggaggagggaaattaggaaatcatggttagggtttg 36948039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 377; Significance: 0; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 377; E-Value: 0
Query Start/End: Original strand, 1 - 421
Target Start/End: Complemental strand, 13907416 - 13906996
Alignment:
Q  1 tgtagtttgcatagttcatgggacatctaagacacagtcacatcagtttaatcaaccaccaccgtataaattatcaccgcgagggccttcttgcaacaac 100  Q
    |||||||||||||| ||| |||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13907416 tgtagtttgcatagctcaggggatatctaagacacattcacatcagtataatcaaccaccaccgtataaattatcaccgcgagggccttcttgcaacaac 13907317  T
Q  101 caccaccgcataaacctccttctagaatataacaaaccgaaaaagagatgataataaattagatagcaatgcaattcaaaaagtcatcggattacaaata 200  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13907316 caccaccgcataaacctccttctagaatataacaaacaaaaaaagagatgataataaattagatagcaatgcaattcaaaaagtcatcggattacaaata 13907217  T
Q  201 accaaaaatcaaactaaacaaatgctcctactcttattccaaccccgaatttgaaaattcctgaactgcaaaatcaacaaaccaaaccccacaccaatca 300  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13907216 accaaaaatcaaactaaacaaatgctcctactcttatttcaaccccgaatttgaaaattcctgaactgcaaaatcaaaaaaccaaaccccacaccaatca 13907117  T
Q  301 tataacaattactttgattttgtaagaagcctaaaaagctattgcaagctattttgtacaatagaggaattgaatggaaagaaagatgtgtggttaacct 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13907116 tataacaattactttgattttgtaagaagcctaaaaagctattgcaagctattttgtacaatagaggaattgaatggaaagaaagatgtgtggttaacct 13907017  T
Q  401 tagtcacaaagaagaggagga 421  Q
    |||||||| | ||||||||||    
T  13907016 tagtcacagaaaagaggagga 13906996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 375; E-Value: 0
Query Start/End: Original strand, 3 - 421
Target Start/End: Complemental strand, 26455059 - 26454641
Alignment:
Q  3 tagtttgcatagttcatgggacatctaagacacagtcacatcagtttaatcaaccaccaccgtataaattatcaccgcgagggccttcttgcaacaacca 102  Q
    |||||||||||| ||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26455059 tagtttgcatagctcaggggatatctaagacacagtcacatcagtataatcaaccaccaccgtataaattatcaccgcgagggccttcttgcaacaacca 26454960  T
Q  103 ccaccgcataaacctccttctagaatataacaaaccgaaaaagagatgataataaattagatagcaatgcaattcaaaaagtcatcggattacaaataac 202  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26454959 ccaccgcataaacctccttctagaatataacaaacaaaaaaagagatgataataaattagatagcaatgcaattcaaaaagtcatcggattacaaataac 26454860  T
Q  203 caaaaatcaaactaaacaaatgctcctactcttattccaaccccgaatttgaaaattcctgaactgcaaaatcaacaaaccaaaccccacaccaatcata 302  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26454859 caaaaatcaaactaaacaaatgctcatactcttatttcaaccccgaatttgaaaattcctgaactgcaaaatcaacaaaccaaaccccacaccaatcata 26454760  T
Q  303 taacaattactttgattttgtaagaagcctaaaaagctattgcaagctattttgtacaatagaggaattgaatggaaagaaagatgtgtggttaacctta 402  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26454759 taacaattactttgattttgtaagaagcctaaaaagctgttgcaagctattttgtacaatagaggaattgaatggaaagaaagatgtgtggttaacctta 26454660  T
Q  403 gtcacaaagaagaggagga 421  Q
    |||||| | ||||||||||    
T  26454659 gtcacagaaaagaggagga 26454641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 365; E-Value: 0
Query Start/End: Original strand, 1 - 421
Target Start/End: Complemental strand, 40604898 - 40604478
Alignment:
Q  1 tgtagtttgcatagttcatgggacatctaagacacagtcacatcagtttaatcaaccaccaccgtataaattatcaccgcgagggccttcttgcaacaac 100  Q
    |||||||||||||| ||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40604898 tgtagtttgcatagctcaggggatatctaagacacagtcacatcagtataatcaaccaccaccgtataaattatcaccgcgagggccttcttgcaacaac 40604799  T
Q  101 caccaccgcataaacctccttctagaatataacaaaccgaaaaagagatgataataaattagatagcaatgcaattcaaaaagtcatcggattacaaata 200  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  40604798 caccaccgcataaacctccttctagaatataacaaacaaaaaaagagatgataataaattagatagcaatccaattcaaaaagtcatcggattacaaata 40604699  T
Q  201 accaaaaatcaaactaaacaaatgctcctactcttattccaaccccgaatttgaaaattcctgaactgcaaaatcaacaaaccaaaccccacaccaatca 300  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  40604698 accaaaaatcaaactaaacaaatgctcatactcttatttcaaccccgaatttgaaaatttctgaactgcaaaatcaacaaaccaaaccccacaccaatca 40604599  T
Q  301 tataacaattactttgattttgtaagaagcctaaaaagctattgcaagctattttgtacaatagaggaattgaatggaaagaaagatgtgtggttaacct 400  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40604598 tataacaattactttgattttgtaagaagcctaaaaagttgttgcaagctattttgtacaatagaggaattgaatggaaagaaagatgtgtggttaacct 40604499  T
Q  401 tagtcacaaagaagaggagga 421  Q
    |||||||| | ||||||||||    
T  40604498 tagtcacagaaaagaggagga 40604478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 451
Target Start/End: Complemental strand, 32287361 - 32287325
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||| ||||||||||||||||||||||||||||    
T  32287361 aggaggatggaaattaggaaatcatggttagggtttg 32287325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Complemental strand, 13899944 - 13899908
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  13899944 aggaggagggaaattaggaaatcatggttagggtttg 13899908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Complemental strand, 13905842 - 13905806
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  13905842 aggaggagggaaattaggaaatcatggttagggtttg 13905806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Complemental strand, 26453570 - 26453534
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  26453570 aggaggagggaaattaggaaatcatggttagggtttg 26453534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Original strand, 35433139 - 35433175
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  35433139 aggaggagggaaattaggaaatcatggttagggtttg 35433175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Complemental strand, 40603405 - 40603369
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  40603405 aggaggagggaaattaggaaatcatggttagggtttg 40603369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 377; Significance: 0; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 377; E-Value: 0
Query Start/End: Original strand, 1 - 421
Target Start/End: Original strand, 35595520 - 35595940
Alignment:
Q  1 tgtagtttgcatagttcatgggacatctaagacacagtcacatcagtttaatcaaccaccaccgtataaattatcaccgcgagggccttcttgcaacaac 100  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35595520 tgtagtttgcatagctcaggggacatctaagacacagtcacatcagtttaatcaaccaccaccgtataaattatcaccgcgagggccttcttgcaacaac 35595619  T
Q  101 caccaccgcataaacctccttctagaatataacaaaccgaaaaagagatgataataaattagatagcaatgcaattcaaaaagtcatcggattacaaata 200  Q
    |||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  35595620 caccaccgcataaacctccttctagaatataacaaacaaaaaaggagatgataataaattagatagcaatgcaattcaaaaagtcaacggattacaaata 35595719  T
Q  201 accaaaaatcaaactaaacaaatgctcctactcttattccaaccccgaatttgaaaattcctgaactgcaaaatcaacaaaccaaaccccacaccaatca 300  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  35595720 accaaaaatcaaactaaacaaatgctcccactcttattccaaccccgaatttgaaaattcctgaactgcaaaatcaacaaaccaaatcccacaccaatca 35595819  T
Q  301 tataacaattactttgattttgtaagaagcctaaaaagctattgcaagctattttgtacaatagaggaattgaatggaaagaaagatgtgtggttaacct 400  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35595820 tataacaattattttgattttgtaagaagcctaaaaagctattgcaagctattttgtacaatagaggaattgaatggaaagaaagatgtgtggttaacct 35595919  T
Q  401 tagtcacaaagaagaggagga 421  Q
    |||||||| | ||||||||||    
T  35595920 tagtcacagaaaagaggagga 35595940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 365; E-Value: 0
Query Start/End: Original strand, 1 - 421
Target Start/End: Original strand, 2045819 - 2046239
Alignment:
Q  1 tgtagtttgcatagttcatgggacatctaagacacagtcacatcagtttaatcaaccaccaccgtataaattatcaccgcgagggccttcttgcaacaac 100  Q
    |||||||||||||| ||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2045819 tgtagtttgcatagctcaggggatatctaagacacagtcacatcagtataatcaaccaccaccgtataaattatcaccgcgagggccttcttgcaacaac 2045918  T
Q  101 caccaccgcataaacctccttctagaatataacaaaccgaaaaagagatgataataaattagatagcaatgcaattcaaaaagtcatcggattacaaata 200  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  2045919 caccaccgcataaacctccttctagaatataacaaacaaaaaaagagatgataataaattagatagcaatccaattcaaaaagtcatcggattacaaata 2046018  T
Q  201 accaaaaatcaaactaaacaaatgctcctactcttattccaaccccgaatttgaaaattcctgaactgcaaaatcaacaaaccaaaccccacaccaatca 300  Q
    |||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2046019 accaaaaatcaaactaaataaatgctcatactcttatttcaaccccgaatttgaaaattcctgaactgcaaaataaacaaaccaaaccccacaccaatca 2046118  T
Q  301 tataacaattactttgattttgtaagaagcctaaaaagctattgcaagctattttgtacaatagaggaattgaatggaaagaaagatgtgtggttaacct 400  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2046119 tataacaattactttgattttgtaagaagcctaaaaagctgttgcaagctattttgtacaatagaggaattgaatggaaagaaagatgtgtggttaacct 2046218  T
Q  401 tagtcacaaagaagaggagga 421  Q
    |||||||| | ||||||||||    
T  2046219 tagtcacagaaaagaggagga 2046239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 52589782 - 52589715
Alignment:
Q  156 aaattagatagcaatgcaattcaaaaagtcatcggattacaaataaccaaaaatcaaactaaacaaat 223  Q
    ||||||||||||||||||||||||||| || |   |||||||||||| ||||||||||  ||||||||    
T  52589782 aaattagatagcaatgcaattcaaaaactcgttacattacaaataacaaaaaatcaaatcaaacaaat 52589715  T

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Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Original strand, 2051974 - 2052010
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  2051974 aggaggagggaaattaggaaatcatggttagggtttg 2052010  T

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Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Original strand, 39514207 - 39514243
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  39514207 aggaggagggaaattaggaaatcatggttagggtttg 39514243  T

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Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Original strand, 45507254 - 45507290
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  45507254 aggaggagggaaattaggaaatcatggttagggtttg 45507290  T

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Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Original strand, 45507403 - 45507439
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  45507403 aggaggagggaaattaggaaatcatggttagggtttg 45507439  T

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Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Original strand, 49791612 - 49791648
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  49791612 aggaggagggaaattaggaaatcatggttagggtttg 49791648  T

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Target: scaffold0121 (Bit Score: 33; Significance: 0.000000003; HSPs: 3)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 451
Target Start/End: Complemental strand, 41458 - 41422
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||| ||||||||||||||||||||||||||||    
T  41458 aggaggatggaaattaggaaatcatggttagggtttg 41422  T

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Target: scaffold0121; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Complemental strand, 41276 - 41240
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  41276 aggaggagggaaattaggaaatcatggttagggtttg 41240  T

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Target: scaffold0121; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Complemental strand, 41367 - 41331
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  41367 aggaggagggaaattaggaaatcatggttagggtttg 41331  T

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Target: scaffold0160 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 451
Target Start/End: Complemental strand, 36168 - 36132
Alignment:
Q  415 aggaggatagaaattaggaaatcatggttagggtttg 451  Q
    |||||||  ||||||||||||||||||||||||||||    
T  36168 aggaggagggaaattaggaaatcatggttagggtttg 36132  T

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