View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0029-Insertion-6 (Length: 456)

Name: NF0029-Insertion-6
Description: NF0029
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0029-Insertion-6
NF0029-Insertion-6
[»] scaffold0005 (1 HSPs)
scaffold0005 (8-455)||(226243-226692)
[»] chr4 (59 HSPs)
chr4 (8-455)||(14590686-14591135)
chr4 (269-352)||(16911515-16911598)
chr4 (269-348)||(6430724-6430803)
chr4 (269-348)||(48598922-48599001)
chr4 (269-348)||(5306762-5306841)
chr4 (269-348)||(5648216-5648295)
chr4 (286-348)||(23501750-23501812)
chr4 (269-344)||(16408702-16408777)
chr4 (269-348)||(20224941-20225020)
chr4 (269-348)||(47528627-47528706)
chr4 (286-348)||(11054262-11054324)
chr4 (269-351)||(14983788-14983870)
chr4 (269-345)||(21646924-21647000)
chr4 (289-348)||(17315417-17315476)
chr4 (269-348)||(30639337-30639416)
chr4 (300-348)||(10660361-10660409)
chr4 (300-348)||(10874506-10874554)
chr4 (289-348)||(5313113-5313172)
chr4 (269-348)||(54730206-54730285)
chr4 (269-342)||(487234-487306)
chr4 (295-348)||(20405050-20405103)
chr4 (269-346)||(30352690-30352767)
chr4 (269-348)||(37494808-37494887)
chr4 (269-340)||(42164247-42164317)
chr4 (298-348)||(13256525-13256575)
chr4 (308-350)||(18969696-18969738)
chr4 (269-342)||(54640438-54640510)
chr4 (295-348)||(55766591-55766644)
chr4 (269-341)||(30496419-30496491)
chr4 (269-348)||(55830819-55830899)
chr4 (269-332)||(40915802-40915865)
chr4 (297-344)||(54966983-54967029)
chr4 (286-332)||(44363248-44363294)
chr4 (284-342)||(49938552-49938610)
chr4 (222-340)||(8473675-8473790)
chr4 (269-329)||(35567146-35567206)
chr4 (269-324)||(39077893-39077948)
chr4 (286-329)||(43035224-43035267)
chr4 (286-325)||(54175043-54175082)
chr4 (269-327)||(23580307-23580365)
chr4 (286-340)||(47441646-47441699)
chr4 (269-339)||(49938689-49938759)
chr4 (269-342)||(12257692-12257764)
chr4 (269-325)||(17043493-17043549)
chr4 (286-330)||(19027823-19027867)
chr4 (222-322)||(41018847-41018945)
chr4 (286-342)||(50856352-50856407)
chr4 (285-328)||(3580951-3580994)
chr4 (297-348)||(20373921-20373972)
chr4 (297-348)||(29879624-29879675)
chr4 (269-320)||(32629367-32629418)
chr4 (288-322)||(7385594-7385628)
chr4 (287-341)||(25343152-25343205)
chr4 (269-319)||(25463108-25463158)
chr4 (269-327)||(30690282-30690340)
chr4 (222-258)||(9987887-9987923)
chr4 (222-258)||(25629095-25629131)
chr4 (269-329)||(39029160-39029220)
chr4 (298-342)||(51420537-51420580)
[»] chr8 (38 HSPs)
chr8 (269-348)||(12670347-12670426)
chr8 (269-348)||(30454194-30454273)
chr8 (269-345)||(20869595-20869671)
chr8 (269-348)||(13160659-13160738)
chr8 (269-348)||(39461095-39461174)
chr8 (269-348)||(2626476-2626555)
chr8 (269-348)||(17823533-17823612)
chr8 (269-348)||(28817725-28817804)
chr8 (269-348)||(36720753-36720832)
chr8 (269-347)||(20284172-20284250)
chr8 (269-347)||(21070801-21070879)
chr8 (286-348)||(24245408-24245470)
chr8 (269-342)||(28407379-28407452)
chr8 (288-348)||(35261636-35261696)
chr8 (269-348)||(7136628-7136707)
chr8 (269-348)||(18164858-18164937)
chr8 (269-348)||(29521784-29521863)
chr8 (269-348)||(44530106-44530185)
chr8 (270-348)||(11748256-11748334)
chr8 (269-341)||(6760786-6760858)
chr8 (269-348)||(45071222-45071301)
chr8 (297-347)||(25250480-25250530)
chr8 (269-348)||(26954089-26954168)
chr8 (269-342)||(30962872-30962944)
chr8 (273-342)||(42083802-42083870)
chr8 (269-342)||(44781605-44781677)
chr8 (286-346)||(8897880-8897940)
chr8 (308-348)||(23286431-23286471)
chr8 (269-328)||(24365159-24365218)
chr8 (309-348)||(40605044-40605083)
chr8 (297-348)||(31454145-31454196)
chr8 (314-348)||(42840866-42840900)
chr8 (286-323)||(31457155-31457192)
chr8 (269-326)||(35105902-35105959)
chr8 (313-341)||(5688801-5688829)
chr8 (289-329)||(11001069-11001109)
chr8 (289-329)||(22598133-22598173)
chr8 (221-257)||(36918171-36918207)
[»] chr5 (34 HSPs)
chr5 (269-348)||(38879538-38879617)
chr5 (272-350)||(43334157-43334235)
chr5 (269-348)||(35710270-35710349)
chr5 (269-348)||(37024653-37024732)
chr5 (269-348)||(41014276-41014355)
chr5 (269-349)||(4619205-4619285)
chr5 (269-349)||(22861765-22861845)
chr5 (222-348)||(24448847-24448972)
chr5 (269-348)||(1565388-1565467)
chr5 (273-345)||(8170085-8170157)
chr5 (269-342)||(39301087-39301159)
chr5 (269-349)||(27328708-27328788)
chr5 (269-348)||(23974738-23974816)
chr5 (220-348)||(2838735-2838862)
chr5 (269-346)||(31299591-31299668)
chr5 (269-348)||(22187242-22187321)
chr5 (294-348)||(19438706-19438760)
chr5 (284-342)||(39079880-39079937)
chr5 (286-350)||(30006280-30006344)
chr5 (295-349)||(12006455-12006509)
chr5 (286-348)||(22600411-22600473)
chr5 (269-329)||(28516533-28516593)
chr5 (272-342)||(10634248-10634317)
chr5 (269-318)||(32703411-32703460)
chr5 (286-321)||(1850624-1850659)
chr5 (286-349)||(17419870-17419933)
chr5 (313-348)||(41956889-41956924)
chr5 (297-348)||(43574555-43574605)
chr5 (297-342)||(209054-209098)
chr5 (220-257)||(9794429-9794466)
chr5 (220-257)||(22600501-22600538)
chr5 (298-327)||(28208235-28208264)
chr5 (289-330)||(31362454-31362495)
chr5 (269-325)||(34074661-34074717)
[»] chr3 (39 HSPs)
chr3 (269-348)||(8247788-8247867)
chr3 (269-348)||(10870050-10870129)
chr3 (269-348)||(13730703-13730782)
chr3 (269-348)||(46421136-46421215)
chr3 (269-348)||(52926309-52926388)
chr3 (269-348)||(1217069-1217148)
chr3 (269-348)||(7696984-7697063)
chr3 (269-348)||(16735420-16735499)
chr3 (269-348)||(29366821-29366900)
chr3 (268-348)||(9607182-9607262)
chr3 (269-348)||(13628891-13628971)
chr3 (269-348)||(22609746-22609824)
chr3 (269-348)||(39203495-39203574)
chr3 (269-348)||(40272911-40272990)
chr3 (286-348)||(4495780-4495842)
chr3 (269-348)||(5173819-5173899)
chr3 (269-348)||(6411920-6411999)
chr3 (269-348)||(12914134-12914213)
chr3 (271-338)||(26869696-26869763)
chr3 (269-347)||(22123014-22123092)
chr3 (286-352)||(26782341-26782407)
chr3 (297-345)||(25517300-25517348)
chr3 (272-342)||(26573113-26573182)
chr3 (269-342)||(34420743-34420815)
chr3 (269-342)||(45620928-45621000)
chr3 (305-348)||(21874999-21875042)
chr3 (269-348)||(12525389-12525465)
chr3 (272-329)||(53062036-53062093)
chr3 (269-325)||(30928246-30928302)
chr3 (269-324)||(7942993-7943048)
chr3 (311-350)||(23871416-23871455)
chr3 (269-319)||(516417-516467)
chr3 (269-342)||(35417902-35417974)
chr3 (312-348)||(9276253-9276289)
chr3 (286-342)||(25944455-25944510)
chr3 (269-351)||(53996665-53996746)
chr3 (269-329)||(19731000-19731060)
chr3 (289-329)||(31542411-31542451)
chr3 (297-344)||(33235513-33235561)
[»] chr2 (45 HSPs)
chr2 (269-348)||(12024017-12024096)
chr2 (269-348)||(14530275-14530354)
chr2 (269-348)||(25079817-25079896)
chr2 (222-348)||(17896216-17896342)
chr2 (269-348)||(8455415-8455494)
chr2 (269-348)||(10543655-10543734)
chr2 (269-348)||(11514393-11514472)
chr2 (269-348)||(21779358-21779437)
chr2 (269-348)||(23397723-23397802)
chr2 (220-348)||(25249789-25249915)
chr2 (269-348)||(7214491-7214570)
chr2 (269-348)||(24200724-24200803)
chr2 (272-348)||(22371014-22371090)
chr2 (269-345)||(27573581-27573657)
chr2 (273-348)||(5840985-5841060)
chr2 (269-348)||(17705452-17705531)
chr2 (270-348)||(19977814-19977892)
chr2 (269-342)||(99362-99434)
chr2 (269-348)||(9671137-9671217)
chr2 (300-348)||(14544020-14544068)
chr2 (305-348)||(39189556-39189599)
chr2 (269-342)||(4516450-4516522)
chr2 (286-334)||(17667973-17668021)
chr2 (302-346)||(27466262-27466306)
chr2 (298-348)||(26684750-26684800)
chr2 (269-342)||(17380335-17380407)
chr2 (269-334)||(17623535-17623600)
chr2 (269-330)||(40416970-40417031)
chr2 (269-329)||(21377172-21377232)
chr2 (295-339)||(39914431-39914475)
chr2 (273-348)||(17472928-17473003)
chr2 (268-327)||(31158539-31158598)
chr2 (289-327)||(5450263-5450301)
chr2 (295-341)||(24860111-24860157)
chr2 (286-342)||(35017781-35017837)
chr2 (269-333)||(44604826-44604890)
chr2 (270-342)||(44643486-44643557)
chr2 (286-329)||(33795261-33795304)
chr2 (286-320)||(25641487-25641521)
chr2 (270-328)||(45235918-45235976)
chr2 (284-329)||(23145812-23145857)
chr2 (284-329)||(23557602-23557647)
chr2 (287-328)||(34752779-34752820)
chr2 (309-346)||(39499353-39499390)
chr2 (269-329)||(29419988-29420048)
[»] chr1 (57 HSPs)
chr1 (269-348)||(34725195-34725274)
chr1 (269-348)||(32632655-32632734)
chr1 (269-348)||(38478379-38478458)
chr1 (269-348)||(46248052-46248131)
chr1 (269-348)||(14617018-14617097)
chr1 (269-348)||(18944623-18944702)
chr1 (273-348)||(22930170-22930245)
chr1 (269-348)||(47214491-47214570)
chr1 (286-348)||(34714603-34714665)
chr1 (286-348)||(40424722-40424784)
chr1 (271-348)||(20004193-20004270)
chr1 (284-349)||(25290142-25290207)
chr1 (269-345)||(30395827-30395903)
chr1 (269-341)||(33222971-33223043)
chr1 (279-346)||(18742070-18742137)
chr1 (269-352)||(23768419-23768502)
chr1 (269-348)||(27474261-27474340)
chr1 (269-348)||(46991784-46991863)
chr1 (286-348)||(8197023-8197085)
chr1 (286-348)||(45812651-45812713)
chr1 (270-347)||(19414420-19414497)
chr1 (287-348)||(19932869-19932930)
chr1 (269-348)||(10668200-10668284)
chr1 (269-341)||(18724644-18724715)
chr1 (269-348)||(27201627-27201706)
chr1 (269-346)||(45402077-45402153)
chr1 (286-341)||(20036208-20036262)
chr1 (297-348)||(41319933-41319984)
chr1 (272-342)||(2435889-2435958)
chr1 (284-341)||(4430140-4430197)
chr1 (269-345)||(9939443-9939520)
chr1 (270-342)||(52910204-52910275)
chr1 (269-332)||(6925096-6925159)
chr1 (269-348)||(24564324-24564403)
chr1 (272-342)||(6983911-6983980)
chr1 (295-345)||(12126960-12127010)
chr1 (269-351)||(50811917-50811998)
chr1 (269-342)||(17470445-17470517)
chr1 (269-342)||(22327086-22327158)
chr1 (286-342)||(2436009-2436064)
chr1 (269-341)||(11596501-11596572)
chr1 (286-342)||(35019217-35019272)
chr1 (269-329)||(35117867-35117927)
chr1 (297-347)||(18335415-18335465)
chr1 (306-348)||(21723644-21723686)
chr1 (298-347)||(21006125-21006174)
chr1 (269-342)||(50760325-50760397)
chr1 (286-342)||(10378841-10378896)
chr1 (297-348)||(18335973-18336024)
chr1 (269-328)||(25468362-25468421)
chr1 (297-344)||(28894658-28894704)
chr1 (295-342)||(44485234-44485280)
chr1 (310-348)||(10163739-10163777)
chr1 (297-342)||(15511278-15511322)
chr1 (269-342)||(19701557-19701629)
chr1 (269-342)||(23371111-23371183)
chr1 (287-347)||(4212208-4212268)
[»] scaffold0187 (4 HSPs)
scaffold0187 (269-350)||(10147-10228)
scaffold0187 (269-350)||(20475-20556)
scaffold0187 (286-348)||(8902-8964)
scaffold0187 (286-348)||(19230-19292)
[»] chr7 (56 HSPs)
chr7 (222-348)||(32758218-32758341)
chr7 (269-348)||(21172106-21172185)
chr7 (269-348)||(42495934-42496013)
chr7 (269-348)||(42798626-42798705)
chr7 (269-348)||(47077952-47078031)
chr7 (286-348)||(48735237-48735299)
chr7 (269-348)||(2541118-2541198)
chr7 (269-344)||(10693170-10693245)
chr7 (269-348)||(42805481-42805560)
chr7 (269-348)||(43557429-43557508)
chr7 (269-345)||(40463837-40463913)
chr7 (269-348)||(7193042-7193121)
chr7 (272-347)||(14732924-14732999)
chr7 (269-348)||(18326991-18327070)
chr7 (269-340)||(19426988-19427059)
chr7 (269-348)||(46354151-46354230)
chr7 (269-343)||(27629596-27629670)
chr7 (287-348)||(42476830-42476891)
chr7 (270-346)||(7794606-7794682)
chr7 (272-348)||(34626309-34626385)
chr7 (289-348)||(5180276-5180335)
chr7 (269-344)||(11617687-11617762)
chr7 (269-348)||(21447547-21447626)
chr7 (287-350)||(29140477-29140540)
chr7 (286-345)||(35334930-35334989)
chr7 (269-348)||(47716416-47716495)
chr7 (286-348)||(22699086-22699148)
chr7 (289-345)||(1424029-1424085)
chr7 (276-348)||(28078237-28078309)
chr7 (277-342)||(3469286-3469350)
chr7 (269-342)||(28362244-28362316)
chr7 (286-342)||(13805066-13805121)
chr7 (284-340)||(19265781-19265836)
chr7 (269-329)||(29907393-29907455)
chr7 (286-348)||(8149062-8149124)
chr7 (286-348)||(12473261-12473323)
chr7 (302-348)||(25198679-25198725)
chr7 (269-331)||(33872008-33872070)
chr7 (269-342)||(48123583-48123655)
chr7 (306-348)||(2663067-2663109)
chr7 (286-328)||(6736867-6736909)
chr7 (293-335)||(28685257-28685299)
chr7 (269-339)||(39123857-39123926)
chr7 (269-323)||(42391197-42391251)
chr7 (269-330)||(7644931-7644992)
chr7 (269-342)||(23419773-23419845)
chr7 (286-326)||(11741774-11741814)
chr7 (286-342)||(19266414-19266469)
chr7 (298-329)||(14099134-14099165)
chr7 (298-329)||(14409151-14409182)
chr7 (301-348)||(45019007-45019054)
chr7 (269-342)||(44123720-44123792)
chr7 (269-329)||(1524285-1524345)
chr7 (287-343)||(5814433-5814489)
chr7 (269-329)||(16341254-16341314)
chr7 (315-351)||(35787383-35787419)
[»] chr6 (28 HSPs)
chr6 (269-341)||(12222016-12222088)
chr6 (269-348)||(1346921-1347000)
chr6 (269-348)||(1354854-1354933)
chr6 (269-348)||(8409200-8409279)
chr6 (269-345)||(14975179-14975255)
chr6 (286-348)||(3815193-3815255)
chr6 (269-350)||(12063422-12063503)
chr6 (269-348)||(29355956-29356036)
chr6 (269-348)||(9161080-9161159)
chr6 (298-347)||(24734591-24734640)
chr6 (270-351)||(32728256-32728337)
chr6 (287-347)||(20400625-20400685)
chr6 (268-348)||(33922926-33923006)
chr6 (269-336)||(6024202-6024269)
chr6 (286-348)||(1941812-1941874)
chr6 (286-344)||(13905095-13905152)
chr6 (270-348)||(15866137-15866215)
chr6 (269-346)||(2166511-2166587)
chr6 (269-346)||(2178144-2178220)
chr6 (292-341)||(19649289-19649338)
chr6 (296-335)||(8417442-8417481)
chr6 (286-340)||(14553477-14553530)
chr6 (269-342)||(12889390-12889462)
chr6 (297-348)||(22967128-22967179)
chr6 (297-348)||(23821214-23821265)
chr6 (296-347)||(23930252-23930303)
chr6 (299-329)||(2755553-2755583)
chr6 (296-341)||(24097545-24097590)
[»] scaffold0168 (1 HSPs)
scaffold0168 (269-348)||(30536-30615)
[»] scaffold0258 (2 HSPs)
scaffold0258 (268-348)||(13121-13201)
scaffold0258 (308-348)||(17507-17547)
[»] scaffold0024 (1 HSPs)
scaffold0024 (284-348)||(83832-83896)
[»] scaffold0057 (3 HSPs)
scaffold0057 (286-348)||(24883-24945)
scaffold0057 (287-342)||(46794-46849)
scaffold0057 (286-342)||(46999-47054)
[»] scaffold0049 (1 HSPs)
scaffold0049 (269-346)||(58936-59013)
[»] scaffold0223 (1 HSPs)
scaffold0223 (269-344)||(11093-11167)
[»] scaffold0311 (1 HSPs)
scaffold0311 (288-342)||(10773-10827)
[»] scaffold1176 (1 HSPs)
scaffold1176 (286-343)||(1701-1758)
[»] scaffold0254 (1 HSPs)
scaffold0254 (269-346)||(4117-4193)
[»] scaffold0031 (1 HSPs)
scaffold0031 (269-347)||(43085-43165)
[»] scaffold0194 (1 HSPs)
scaffold0194 (286-348)||(24621-24683)
[»] scaffold0018 (1 HSPs)
scaffold0018 (310-343)||(73001-73034)
[»] scaffold0036 (1 HSPs)
scaffold0036 (286-345)||(35134-35194)
[»] scaffold0116 (1 HSPs)
scaffold0116 (297-331)||(8865-8899)


Alignment Details
Target: scaffold0005 (Bit Score: 349; Significance: 0; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 8 - 455
Target Start/End: Original strand, 226243 - 226692
Alignment:
Q  8 ccatcacctgttactgccacaacttcattaaagtcattcctcaaatgtttcaccaaggtatgcttatcaagtggcaatgatctagccattacctacaaac 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  226243 ccatcacctgttactgccacaacttcattaaagtcattcctcaaatgtttcaccaaggtatgcttatcaagtggcaatgatctagccattacctacaaac 226342  T
Q  108 attaaccaaccactgtataaatttaccataaccttagaaaataaaataaaaaggtcaaggtaacctggtgc-ctaaagcttttgcatacgcagggttcgg 206  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||| |||||| ||||||||||| |||||||||    
T  226343 attaaccagccactgtataaatttaccataaccttagaaaataaaataaaaaggccagggcaacctggtgcactaaagtttttgcatacgtagggttcgg 226442  T
Q  207 gaaaaggtcccaagatcccactatttggtgtattgtatacagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttc 306  Q
    |||||||||||||| |||||| ||||| |||||||||| ||||||||||||        || |||||||||||| ||| |||||||||||||||||||||    
T  226443 gaaaaggtcccaaggtcccaccatttgatgtattgtatgcagccttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgacctttc 226542  T
Q  307 agtcacatgacaacaactttaccagttgcgccaaggttacc-ctcagccttagaaaataaaatgaactttagaagttaaatagagtatatgcagaatgga 405  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  226543 agtcacatgacaacaactttaccagttgcgccaaggttaccactcaggcttagaaaataaaatgaactttagaagttaaatagagtatatgcagaatgga 226642  T
Q  406 acagaaacacaacctgcaatttaggtattatctcttccatttctcgctga 455  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  226643 aaagaaacacaacctgcaatttaggtattatctcttccatttctcgctga 226692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 349; Significance: 0; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 8 - 455
Target Start/End: Complemental strand, 14591135 - 14590686
Alignment:
Q  8 ccatcacctgttactgccacaacttcattaaagtcattcctcaaatgtttcaccaaggtatgcttatcaagtggcaatgatctagccattacctacaaac 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14591135 ccatcacctgttactgccacaacttcattaaagtcattcctcaaatgtttcaccaaggtatgcttatcaagtggcaatgatctagccattacctacaaac 14591036  T
Q  108 attaaccaaccactgtataaatttaccataaccttagaaaataaaataaaaaggtcaaggtaacctggtgc-ctaaagcttttgcatacgcagggttcgg 206  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||| |||||| ||||||||||| |||||||||    
T  14591035 attaaccagccactgtataaatttaccataaccttagaaaataaaataaaaaggccagggcaacctggtgcactaaagtttttgcatacgtagggttcgg 14590936  T
Q  207 gaaaaggtcccaagatcccactatttggtgtattgtatacagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttc 306  Q
    |||||||||||||| |||||| ||||| |||||||||| ||||||||||||        || |||||||||||| ||| |||||||||||||||||||||    
T  14590935 gaaaaggtcccaaggtcccaccatttgatgtattgtatgcagccttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgacctttc 14590836  T
Q  307 agtcacatgacaacaactttaccagttgcgccaaggttacc-ctcagccttagaaaataaaatgaactttagaagttaaatagagtatatgcagaatgga 405  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14590835 agtcacatgacaacaactttaccagttgcgccaaggttaccactcaggcttagaaaataaaatgaactttagaagttaaatagagtatatgcagaatgga 14590736  T
Q  406 acagaaacacaacctgcaatttaggtattatctcttccatttctcgctga 455  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14590735 aaagaaacacaacctgcaatttaggtattatctcttccatttctcgctga 14590686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 269 - 352
Target Start/End: Complemental strand, 16911598 - 16911515
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccctcag 352  Q
    |||||||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16911598 caagaggctgtttctaggacttgaacccgtgacctttaagtcacatgacaacaactttaccagttgcgccaaggttaccctcag 16911515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 6430724 - 6430803
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6430724 caagaggctgtttccatgacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 6430803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 48598922 - 48599001
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48598922 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 48599001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 5306762 - 5306841
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  5306762 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacatcaactttaccagttgcgccaaggttaccc 5306841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 5648295 - 5648216
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  5648295 caagaggctgtttccaggacttgaacccgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttaccc 5648216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 286 - 348
Target Start/End: Complemental strand, 23501812 - 23501750
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23501812 gacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 23501750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 269 - 344
Target Start/End: Original strand, 16408702 - 16408777
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtt 344  Q
    |||||||||||| | | |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  16408702 caagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggtt 16408777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 20225020 - 20224941
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||||| |||| | | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20225020 caagaggttgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 20224941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 47528627 - 47528706
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  47528627 caagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcaccaaggttaccc 47528706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 348
Target Start/End: Original strand, 11054262 - 11054324
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11054262 gacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaagttaccc 11054324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 269 - 351
Target Start/End: Complemental strand, 14983870 - 14983788
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccctca 351  Q
    |||||||||||| | ||||||||||||||||||||| || ||| |||||||||||||||||||||  ||||||||||||||||    
T  14983870 caagaggctgtttcaaagacttgaatccgtgaccttccaatcatatgacaacaactttaccagttctgccaaggttaccctca 14983788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 269 - 345
Target Start/End: Complemental strand, 21647000 - 21646924
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 345  Q
    |||||||||||| | | |||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21647000 caagaggctgtttccaggacttgaacctgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggtta 21646924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 17315417 - 17315476
Alignment:
Q  289 ttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17315417 ttgaacccgtgacctttcagtcacatgacaacaactttaccggttgcgccaaggttaccc 17315476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 30639416 - 30639337
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||| ||||| | | |||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  30639416 caagagtctgtttccaggacttgaaccagtgacctttcagtcacaagacaacaactttaccagttgcgccaaggttaccc 30639337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 300 - 348
Target Start/End: Complemental strand, 10660409 - 10660361
Alignment:
Q  300 acctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10660409 acctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 10660361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 300 - 348
Target Start/End: Complemental strand, 10874554 - 10874506
Alignment:
Q  300 acctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10874554 acctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 10874506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 5313113 - 5313172
Alignment:
Q  289 ttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  5313113 ttgaacccgtgacctttcaatcacatgacaacaactttaccagttacgccaaggttaccc 5313172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 54730285 - 54730206
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| ||| |||||||| |||||||||||  ||||||||||||||||||||||  ||||||||| |||||||    
T  54730285 caagaggctgtttctaggacttgaacccgtgaccttttggtcacatgacaacaactttaccgattgcgccaaagttaccc 54730206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 269 - 342
Target Start/End: Original strand, 487234 - 487306
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    ||||||| |||| | |||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  487234 caagaggttgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttacc-gttacgccaagg 487306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 348
Target Start/End: Complemental strand, 20405103 - 20405050
Alignment:
Q  295 ccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  20405103 ccgtgaccttccagtcacatgacaacaactttaccagttgcgtcaaggttaccc 20405050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 269 - 346
Target Start/End: Original strand, 30352690 - 30352767
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttac 346  Q
    |||||||||||| | | ||||  || |||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  30352690 caagaggctgtttccaggactctaacccgtgacctttcggtcacttgacaacaactttaccagttgcgccaaggttac 30352767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 37494887 - 37494808
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||||| |||| | | |||||||| | |||||||||||||| |||| ||||||||||||||||||| ||||||||||||    
T  37494887 caagaggttgtttccaggacttgaacctgtgacctttcagtcgcatggcaacaactttaccagttgcaccaaggttaccc 37494808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 269 - 340
Target Start/End: Original strand, 42164247 - 42164317
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaa 340  Q
    ||||||| |||| | |||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||    
T  42164247 caagaggttgtttccaagacttgaacccgtgacctttcagtcacatgacaacaattttacc-gttgcgccaa 42164317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 298 - 348
Target Start/End: Original strand, 13256525 - 13256575
Alignment:
Q  298 tgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  13256525 tgaccttccagtcacatgacaacaactttaccagttgcaccaaggttaccc 13256575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 308 - 350
Target Start/End: Complemental strand, 18969738 - 18969696
Alignment:
Q  308 gtcacatgacaacaactttaccagttgcgccaaggttaccctc 350  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  18969738 gtcacatgacaacaactttaccagttgcgccaaggttaccctc 18969696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 269 - 342
Target Start/End: Original strand, 54640438 - 54640510
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    |||||||||||| | |||||||||| |||||||||||||| ||| ||||||||| |||||| ||||||||||||    
T  54640438 caagaggctgtttccaagacttgaacccgtgacctttcagccacgtgacaacaattttacc-gttgcgccaagg 54640510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 348
Target Start/End: Original strand, 55766591 - 55766644
Alignment:
Q  295 ccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||| | ||||||||||||||||||||||||||||| |||||||||||    
T  55766591 ccgtgaccttccggtcacatgacaacaactttaccagttgcgtcaaggttaccc 55766644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 269 - 341
Target Start/End: Original strand, 30496419 - 30496491
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 341  Q
    |||||||||||| | | ||||||||  ||||||||||||||||| |||||||||||||  |||||||||||||    
T  30496419 caagaggctgtttccatgacttgaacacgtgacctttcagtcacgtgacaacaacttttacagttgcgccaag 30496491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 55830819 - 55830899
Alignment:
Q  269 caagaggctgttcctaagacttgaa-tccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||| ||||| | || ||||||| ||||||||||| |  |||||||||||||||||||||||||||| |||||||||||    
T  55830819 caagagactgtttccaaaacttgaactccgtgaccttccgatcacatgacaacaactttaccagttgcgtcaaggttaccc 55830899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 332
Target Start/End: Complemental strand, 40915865 - 40915802
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagt 332  Q
    |||||||||||| | | |||||||| ||||||||||  ||||||||||||||||||||||||||    
T  40915865 caagaggctgtttccaggacttgaacccgtgaccttatagtcacatgacaacaactttaccagt 40915802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 344
Target Start/End: Complemental strand, 54967029 - 54966983
Alignment:
Q  297 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtt 344  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  54967029 gtgacctttcagtcacatgacaacaactttacc-gttgcgccaaggtt 54966983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 44363248 - 44363294
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagt 332  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||    
T  44363248 gacttgaactcgtgacctttcagtcacatgacaacaactttaccagt 44363294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 284 - 342
Target Start/End: Original strand, 49938552 - 49938610
Alignment:
Q  284 aagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    |||||||||||| |||||||||||||||| |||||||||||||  | ||||||||||||    
T  49938552 aagacttgaatctgtgacctttcagtcacgtgacaacaacttttaccgttgcgccaagg 49938610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 222 - 340
Target Start/End: Original strand, 8473675 - 8473790
Alignment:
Q  222 tcccactatttggtgtattgtatacagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 321  Q
    |||||| |||||||||||||||| ||||||||||||        |  |||||||||||| | | |||||||| |||  ||||| | |||| |||||||||    
T  8473675 tcccaccatttggtgtattgtatgcagccttaccct---gttaaacacaagaggctgtttccaggacttgaacccgcaaccttccggtcatatgacaaca 8473771  T
Q  322 actttaccagttgcgccaa 340  Q
    |||||||||||||||||||    
T  8473772 actttaccagttgcgccaa 8473790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 269 - 329
Target Start/End: Complemental strand, 35567206 - 35567146
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 329  Q
    |||| ||||||| | |||||||||| || |||||||||||| |||||||||||||||||||    
T  35567206 caagtggctgtttccaagacttgaacccatgacctttcagttacatgacaacaactttacc 35567146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 324
Target Start/End: Original strand, 39077893 - 39077948
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaact 324  Q
    |||||||||||| | | |||||||| ||||||||||||| ||||||||||||||||    
T  39077893 caagaggctgtttccaggacttgaacccgtgacctttcaatcacatgacaacaact 39077948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 286 - 329
Target Start/End: Complemental strand, 43035267 - 43035224
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttacc 329  Q
    |||||||| |||||||||||||||||| ||||||||||||||||    
T  43035267 gacttgaacccgtgacctttcagtcacgtgacaacaactttacc 43035224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 286 - 325
Target Start/End: Complemental strand, 54175082 - 54175043
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactt 325  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  54175082 gacttgaatccgtgacatttcagtcacatgacaacaactt 54175043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 327
Target Start/End: Original strand, 23580307 - 23580365
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaacttta 327  Q
    ||||||||| || |||  ||||||| |||||||||||||||||| ||||||||||||||    
T  23580307 caagaggctctttctagaacttgaacccgtgacctttcagtcacgtgacaacaacttta 23580365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 340
Target Start/End: Original strand, 47441646 - 47441699
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaa 340  Q
    |||||||| | |||||||||||||||| |||||||||||||||| ||||||||||    
T  47441646 gacttgaacctgtgacctttcagtcacgtgacaacaactttacc-gttgcgccaa 47441699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 339
Target Start/End: Original strand, 49938689 - 49938759
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgcca 339  Q
    |||||||||||| | | |||||||| | |||||||||||||||| |||||||||||||  | |||||||||    
T  49938689 caagaggctgtttccaggacttgaacctgtgacctttcagtcacgtgacaacaacttttaccgttgcgcca 49938759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 269 - 342
Target Start/End: Original strand, 12257692 - 12257764
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    ||||| |||||| ||| || ||||| ||||||||||||| |||| |||||||||||||||| |||||| |||||    
T  12257692 caagacgctgtttctaggatttgaacccgtgacctttcaatcacgtgacaacaactttacc-gttgcgtcaagg 12257764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 269 - 325
Target Start/End: Original strand, 17043493 - 17043549
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactt 325  Q
    |||||||||||| | | |||||||| | |||||||||||||||| ||||||||||||    
T  17043493 caagaggctgtttccaggacttgaacctgtgacctttcagtcacttgacaacaactt 17043549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 330
Target Start/End: Complemental strand, 19027867 - 19027823
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttacca 330  Q
    |||||||| |||||||||||||||||| ||||||||||| |||||    
T  19027867 gacttgaacccgtgacctttcagtcacgtgacaacaactctacca 19027823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 222 - 322
Target Start/End: Original strand, 41018847 - 41018945
Alignment:
Q  222 tcccactatttggtgtattgtatacagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 321  Q
    ||||||||||||||||||||||   ||||||||||||       |  ||||||| |||| | | |||||||| |||||||||||||||||| ||||||||    
T  41018847 tcccactatttggtgtattgtacgtagccttaccctaattttaca--caagaggttgtttccaggacttgaacccgtgacctttcagtcacgtgacaaca 41018944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 342
Target Start/End: Original strand, 50856352 - 50856407
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    |||||||| ||||||||||||| |||  |||||||||||||||| ||||||||||||    
T  50856352 gacttgaacccgtgacctttcaatcatgtgacaacaactttacc-gttgcgccaagg 50856407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 328
Target Start/End: Original strand, 3580951 - 3580994
Alignment:
Q  285 agacttgaatccgtgacctttcagtcacatgacaacaactttac 328  Q
    |||||||||  |||||| ||||||||||||||||||||||||||    
T  3580951 agacttgaactcgtgacttttcagtcacatgacaacaactttac 3580994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 348
Target Start/End: Original strand, 20373921 - 20373972
Alignment:
Q  297 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||| ||||||||| |||| |||||||| |||||||||||||| |||||||    
T  20373921 gtgacatttcagtcatatgagaacaacttgaccagttgcgccaaagttaccc 20373972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 348
Target Start/End: Original strand, 29879624 - 29879675
Alignment:
Q  297 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||||||  ||||||||||||||||||||| ||||||| |||| |||||||    
T  29879624 gtgaccttctagtcacatgacaacaactttatcagttgcaccaatgttaccc 29879675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 320
Target Start/End: Original strand, 32629367 - 32629418
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaac 320  Q
    |||||||||||| | | || ||||| ||||||||||||||||||||||||||    
T  32629367 caagaggctgtttcgaggatttgaacccgtgacctttcagtcacatgacaac 32629418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 322
Target Start/End: Original strand, 7385594 - 7385628
Alignment:
Q  288 cttgaatccgtgacctttcagtcacatgacaacaa 322  Q
    |||||| ||||||||||||||||||||||||||||    
T  7385594 cttgaacccgtgacctttcagtcacatgacaacaa 7385628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 25343205 - 25343152
Alignment:
Q  287 acttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 341  Q
    ||||||| | ||||||| |||||||| ||||||||||||||||| ||||||||||    
T  25343205 acttgaacctgtgacctatcagtcacgtgacaacaactttacca-ttgcgccaag 25343152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 319
Target Start/End: Complemental strand, 25463158 - 25463108
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaa 319  Q
    ||||||| |||| | | |||||||| |||||||||||||||||||||||||    
T  25463158 caagaggttgtttccaggacttgaacccgtgacctttcagtcacatgacaa 25463108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 327
Target Start/End: Original strand, 30690282 - 30690340
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaacttta 327  Q
    ||||||||| || | | |||||||| |||||||||||||||||| ||||||| ||||||    
T  30690282 caagaggctttttccaggacttgaacccgtgacctttcagtcacttgacaaccacttta 30690340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 258
Target Start/End: Original strand, 9987887 - 9987923
Alignment:
Q  222 tcccactatttggtgtattgtatacagccttacccta 258  Q
    |||||| |||||||||||||||| |||||||||||||    
T  9987887 tcccaccatttggtgtattgtatgcagccttacccta 9987923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 258
Target Start/End: Complemental strand, 25629131 - 25629095
Alignment:
Q  222 tcccactatttggtgtattgtatacagccttacccta 258  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  25629131 tcccaccatttggtgtattgtacacagccttacccta 25629095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 329
Target Start/End: Original strand, 39029160 - 39029220
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 329  Q
    |||||||||||| | ||| |||||| |  |||||||| ||||||| |||||||||||||||    
T  39029160 caagaggctgtttccaaggcttgaacctatgaccttttagtcacacgacaacaactttacc 39029220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 51420580 - 51420537
Alignment:
Q  298 tgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    ||||||||||||||| |||||||||||| ||| ||||||||||||    
T  51420580 tgacctttcagtcacgtgacaacaacttcacc-gttgcgccaagg 51420537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 8e-28; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 12670347 - 12670426
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12670347 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 12670426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 30454194 - 30454273
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30454194 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 30454273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 20869595 - 20869671
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 345  Q
    |||||||||||| | | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20869595 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 20869671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 13160738 - 13160659
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| ||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  13160738 caagaggctgtttctaggacttgaacccgtgaccttacagtcacatgacaacaactttaccagttgcgccgaggttaccc 13160659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 39461095 - 39461174
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  39461095 caagaggctgtttccaggacttgaacccgtgacctttcagtctcatgacaacaactttaccagttgcgccaaggttaccc 39461174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 2626555 - 2626476
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  2626555 caagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccaattgcgccaaggttaccc 2626476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 17823612 - 17823533
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  17823612 caagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccagttgcgccaagattaccc 17823533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 28817725 - 28817804
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  28817725 caagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaaggttaccc 28817804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 36720832 - 36720753
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  36720832 caagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttacgccaaggttaccc 36720753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 269 - 347
Target Start/End: Original strand, 20284172 - 20284250
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacc 347  Q
    |||||||||||| | | |||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  20284172 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacccgttgcgtcaaggttacc 20284250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 269 - 347
Target Start/End: Original strand, 21070801 - 21070879
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacc 347  Q
    |||||||||||| | | |||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  21070801 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacccgttgcgtcaaggttacc 21070879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 348
Target Start/End: Complemental strand, 24245470 - 24245408
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24245470 gacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgccccaaggttaccc 24245408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 269 - 342
Target Start/End: Complemental strand, 28407452 - 28407379
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    |||||||||||| | | |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  28407452 caagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaagg 28407379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 288 - 348
Target Start/End: Complemental strand, 35261696 - 35261636
Alignment:
Q  288 cttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  35261696 cttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 35261636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 7136628 - 7136707
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||||| |||| | | |||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7136628 caagaggttgtttccaggacttgaacccatgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 7136707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 18164858 - 18164937
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||    
T  18164858 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttcaccggttgcgccaagattaccc 18164937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 29521784 - 29521863
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| |||||||||| |||||||| ||||||||||||| ||||||||||||||||||||    
T  29521784 caagaggctgtttccaggacttgaacccgtgaccttccagtcacacgacaacaactttatcagttgcgccaaggttaccc 29521863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 44530185 - 44530106
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||||| |||| | |||||||||| ||||||||||  |||||||||||| |||||||||||||||||||||||||||||    
T  44530185 caagaggttgtttccaagacttgaacccgtgaccttctagtcacatgacagcaactttaccagttgcgccaaggttaccc 44530106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 11748334 - 11748256
Alignment:
Q  270 aagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||||||||| | |||||||||| ||||||| |||||||||||||||||||| || ||||||||| |||| |||||||    
T  11748334 aagaggctgtttccaagacttgaacccgtgacatttcagtcacatgacaacaatttcaccagttgcaccaaagttaccc 11748256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 269 - 341
Target Start/End: Complemental strand, 6760858 - 6760786
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 341  Q
    |||||||||||| | | |||||||| ||||||||||  ||||| |||||||||||||||||||||||||||||    
T  6760858 caagaggctgtttccaggacttgaacccgtgaccttctagtcatatgacaacaactttaccagttgcgccaag 6760786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 45071301 - 45071222
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | |  ||||||| |||||||||| || ||||||||||||||||||||||||  ||||||||||||||    
T  45071301 caagaggctgtttccagaacttgaacccgtgaccttacaatcacatgacaacaactttaccagtatcgccaaggttaccc 45071222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 297 - 347
Target Start/End: Complemental strand, 25250530 - 25250480
Alignment:
Q  297 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacc 347  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  25250530 gtgaccttccagtcacatgacaacaactttaccagttgtgccaaggttacc 25250480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 26954168 - 26954089
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| ||||||||||  | |||||||||||||||||||||| || |||||| |||||||    
T  26954168 caagaggctgtttccaggacttgaacccgtgaccttctaatcacatgacaacaactttaccaattacgccaaagttaccc 26954089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 269 - 342
Target Start/End: Original strand, 30962872 - 30962944
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    |||||||||||| | | ||||||||  |||||||||||| |||||||||||||||||| || ||||||||||||    
T  30962872 caagaggctgtttccaggacttgaagtcgtgacctttcaatcacatgacaacaacttttcc-gttgcgccaagg 30962944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 273 - 342
Target Start/End: Original strand, 42083802 - 42083870
Alignment:
Q  273 aggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    |||||||| | | |||||||| |||||||||||||||||| ||||||||| |||||| ||||||||||||    
T  42083802 aggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaattttacc-gttgcgccaagg 42083870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 269 - 342
Target Start/End: Original strand, 44781605 - 44781677
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    ||||||| |||| | | |||||||| |||||| ||||||||||| |||||||||||||||| ||||||||||||    
T  44781605 caagaggttgtttccaggacttgaacccgtgaactttcagtcacgtgacaacaactttacc-gttgcgccaagg 44781677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 8897880 - 8897940
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttac 346  Q
    ||||| || |||||||||| | ||||||||||||||||||||||||||| |||| ||||||    
T  8897880 gacttcaacccgtgaccttgctgtcacatgacaacaactttaccagttgtgccagggttac 8897940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 348
Target Start/End: Original strand, 23286431 - 23286471
Alignment:
Q  308 gtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  23286431 gtcacatgacaacaactttaccagttgcgacaaggttaccc 23286471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 328
Target Start/End: Original strand, 24365159 - 24365218
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttac 328  Q
    |||||||||||| ||| | |||||| ||||||| ||| ||||||||||||||||||||||    
T  24365159 caagaggctgtttctagggcttgaacccgtgacattttagtcacatgacaacaactttac 24365218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 348
Target Start/End: Original strand, 40605044 - 40605083
Alignment:
Q  309 tcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  40605044 tcacatgacaacaactttaccagttgcgccaaagttaccc 40605083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 348
Target Start/End: Complemental strand, 31454196 - 31454145
Alignment:
Q  297 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||  ||||||||||||||| |||| ||||||||||| ||||||    
T  31454196 gtgacctttcaaccacatgacaacaactataccggttgcgccaagattaccc 31454145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 314 - 348
Target Start/End: Complemental strand, 42840900 - 42840866
Alignment:
Q  314 tgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||||||||||||| |||||||||||||||||||    
T  42840900 tgacaacaactttactagttgcgccaaggttaccc 42840866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 323
Target Start/End: Complemental strand, 31457192 - 31457155
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaac 323  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  31457192 gacttgaacccgtgacctttcagccacatgacaacaac 31457155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 326
Target Start/End: Complemental strand, 35105959 - 35105902
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaacttt 326  Q
    ||||||| |||| | | |||||||| |||||||||||||| ||| |||||||||||||    
T  35105959 caagaggttgtttccaggacttgaacccgtgacctttcagccacgtgacaacaacttt 35105902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 341
Target Start/End: Complemental strand, 5688829 - 5688801
Alignment:
Q  313 atgacaacaactttaccagttgcgccaag 341  Q
    |||||||||||||||||||||||||||||    
T  5688829 atgacaacaactttaccagttgcgccaag 5688801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 329
Target Start/End: Original strand, 11001069 - 11001109
Alignment:
Q  289 ttgaatccgtgacctttcagtcacatgacaacaactttacc 329  Q
    ||||| ||| ||||||||| |||||||||||||||||||||    
T  11001069 ttgaacccgcgacctttcaatcacatgacaacaactttacc 11001109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 329
Target Start/End: Complemental strand, 22598173 - 22598133
Alignment:
Q  289 ttgaatccgtgacctttcagtcacatgacaacaactttacc 329  Q
    ||||| |||||||||||||||||  ||||||||||||||||    
T  22598173 ttgaacccgtgacctttcagtcatgtgacaacaactttacc 22598133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 257
Target Start/End: Complemental strand, 36918207 - 36918171
Alignment:
Q  221 atcccactatttggtgtattgtatacagccttaccct 257  Q
    |||| |||||||||||||||||| |||||||||||||    
T  36918207 atcctactatttggtgtattgtacacagccttaccct 36918171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 8e-28; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 38879617 - 38879538
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38879617 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 38879538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 272 - 350
Target Start/End: Complemental strand, 43334235 - 43334157
Alignment:
Q  272 gaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccctc 350  Q
    ||||||||| | | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43334235 gaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccctc 43334157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 35710349 - 35710270
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  35710349 caagaggctgtttccaggacttgaacccgtgacctttcagttacatgacaacaactttaccagttgcgccaaggttaccc 35710270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 37024653 - 37024732
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  37024653 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcaccaaggttaccc 37024732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 41014355 - 41014276
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  41014355 caagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 41014276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 269 - 349
Target Start/End: Original strand, 4619205 - 4619285
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccct 349  Q
    ||||||||| || | | |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4619205 caagaggctatttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccct 4619285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 269 - 349
Target Start/End: Original strand, 22861765 - 22861845
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccct 349  Q
    |||||| ||| | ||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  22861765 caagagactgcttctaggacttgaatccgtgacctttcagtcacatgacaacaactttatcagttgtgccaaggttaccct 22861845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 222 - 348
Target Start/End: Complemental strand, 24448972 - 24448847
Alignment:
Q  222 tcccactatttggtgtattgtatacagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 321  Q
    |||||| |||||||||||||||  |||||||||||||       |  ||| |||||||| | | |||||||| |||||||||| ||||||||||||||||    
T  24448972 tcccaccatttggtgtattgtacgcagccttaccctatttttt-acacaaaaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaaca 24448874  T
Q  322 actttaccagttgcgccaaggttaccc 348  Q
    |||||||||||||||||||||||||||    
T  24448873 actttaccagttgcgccaaggttaccc 24448847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 1565467 - 1565388
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||||| |||| | | |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1565467 caagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 1565388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 273 - 345
Target Start/End: Original strand, 8170085 - 8170157
Alignment:
Q  273 aggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 345  Q
    |||||||| | | |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  8170085 aggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccagttgcgccaaggtta 8170157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 269 - 342
Target Start/End: Complemental strand, 39301159 - 39301087
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    ||||||| |||||| |||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  39301159 caagaggttgttcccaagacttgaacccgtgacctttcagtaacatgacaacaactttacc-gttgcgccaagg 39301087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 269 - 349
Target Start/End: Complemental strand, 27328788 - 27328708
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccct 349  Q
    |||||| ||||| | | |||||||| | |||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  27328788 caagagactgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccaattgcgtcaaggttaccct 27328708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 23974816 - 23974738
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||||| |||| | | |||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  23974816 caagaggttgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc-gttgcgccaaggttaccc 23974738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 220 - 348
Target Start/End: Complemental strand, 2838862 - 2838735
Alignment:
Q  220 gatcccactatttggtgtattgtatacagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgaccttt-cagtcacatgaca 318  Q
    |||||||| |||||||||||||||  ||||||||||||        |  ||||| |||||| || ||||||||   |||||||||| |||||||||||||    
T  2838862 gatcccaccatttggtgtattgtacgcagccttaccctgtttttaca--caagatgctgtttctgagacttgacctcgtgacctttacagtcacatgaca 2838765  T
Q  319 acaactttaccagttgcgccaaggttaccc 348  Q
    ||||||||||| ||||||||||||||||||    
T  2838764 acaactttaccggttgcgccaaggttaccc 2838735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 269 - 346
Target Start/End: Complemental strand, 31299668 - 31299591
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttac 346  Q
    |||||||||||| ||| ||||||||   ||||||| | ||||||||||||||||||||||||||||| ||||||||||    
T  31299668 caagaggctgtttctaggacttgaactagtgacctgtaagtcacatgacaacaactttaccagttgcaccaaggttac 31299591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 22187321 - 22187242
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | ||||| || | ||||||||||||||| |||||||||||||||| ||||||||||| |||||||    
T  22187321 caagaggctgtttccaggacttaaaccggtgacctttcagtcaaatgacaacaactttactagttgcgccaaagttaccc 22187242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 348
Target Start/End: Complemental strand, 19438760 - 19438706
Alignment:
Q  294 tccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||    
T  19438760 tccgtgatcttttagtcatatgacaacaactttaccagttgcgccaaggttaccc 19438706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 284 - 342
Target Start/End: Original strand, 39079880 - 39079937
Alignment:
Q  284 aagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    |||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||    
T  39079880 aagacttgaacccgtgacctttctgtcacatgacaacaactttacc-gttgcgccaagg 39079937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 350
Target Start/End: Complemental strand, 30006344 - 30006280
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccctc 350  Q
    ||||||||||  ||||||||||||||||||||||||| |||| |||||||||||| |||| ||||    
T  30006344 gacttgaatctatgacctttcagtcacatgacaacaaatttatcagttgcgccaatgttaacctc 30006280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 295 - 349
Target Start/End: Original strand, 12006455 - 12006509
Alignment:
Q  295 ccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccct 349  Q
    ||||||||||||||||||||||||||||||| | |||||||||||| | ||||||    
T  12006455 ccgtgacctttcagtcacatgacaacaacttgagcagttgcgccaaagctaccct 12006509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 286 - 348
Target Start/End: Complemental strand, 22600473 - 22600411
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||| |||| ||||| ||||||||||| |||||||||||||||| || |||||||||||    
T  22600473 gacttgaacccgtaaccttccagtcacatgataacaactttaccagttacgtcaaggttaccc 22600411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 269 - 329
Target Start/End: Original strand, 28516533 - 28516593
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 329  Q
    ||||||| |||| | |||||||||| |||||||||||||| ||| ||||||||||||||||    
T  28516533 caagaggatgtttccaagacttgaacccgtgacctttcagccacctgacaacaactttacc 28516593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 272 - 342
Target Start/End: Original strand, 10634248 - 10634317
Alignment:
Q  272 gaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    |||| |||| ||| |||||||| || ||||||||||||||| |||||||||||| ||| ||||||||||||    
T  10634248 gaggttgtttctaggacttgaacccatgacctttcagtcacttgacaacaacttcacc-gttgcgccaagg 10634317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 269 - 318
Target Start/End: Complemental strand, 32703460 - 32703411
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgaca 318  Q
    |||||||||||| | | |||||||| ||||||||||||||||||||||||    
T  32703460 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgaca 32703411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 321
Target Start/End: Complemental strand, 1850659 - 1850624
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaaca 321  Q
    |||||||| |||||||||||||||||||||||||||    
T  1850659 gacttgaacccgtgacctttcagtcacatgacaaca 1850624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 349
Target Start/End: Complemental strand, 17419933 - 17419870
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccct 349  Q
    ||||||||  ||| ||||||||||||||| ||||||| |||||||||| ||||||  |||||||    
T  17419933 gacttgaactcgtaacctttcagtcacattacaacaattttaccagttacgccaaaattaccct 17419870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 348
Target Start/End: Complemental strand, 41956924 - 41956889
Alignment:
Q  313 atgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||||||||||||||||||| |||||||    
T  41956924 atgacaacaactttaccagttgcgccaatgttaccc 41956889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 348
Target Start/End: Complemental strand, 43574605 - 43574555
Alignment:
Q  297 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||||||| |||||||||||||| || ||||||||||| |||||    
T  43574605 gtgacctttcagtcacgtgacaacaactttatca-ttgcgccaaggctaccc 43574555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 342
Target Start/End: Original strand, 209054 - 209098
Alignment:
Q  297 gtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    ||||||||| ||||||||||||||||||||||| | ||||||||||    
T  209054 gtgaccttttagtcacatgacaacaactttacc-gctgcgccaagg 209098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 257
Target Start/End: Original strand, 9794429 - 9794466
Alignment:
Q  220 gatcccactatttggtgtattgtatacagccttaccct 257  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  9794429 gatcccactatttggtgtattgtatgcagtcttaccct 9794466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 257
Target Start/End: Complemental strand, 22600538 - 22600501
Alignment:
Q  220 gatcccactatttggtgtattgtatacagccttaccct 257  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  22600538 gatcccaccatttggtgtattgtacacagccttaccct 22600501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 327
Target Start/End: Original strand, 28208235 - 28208264
Alignment:
Q  298 tgacctttcagtcacatgacaacaacttta 327  Q
    ||||||||||||||||||||||||||||||    
T  28208235 tgacctttcagtcacatgacaacaacttta 28208264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 31362454 - 31362495
Alignment:
Q  289 ttgaatccgtgacctttcagtcacatgacaacaactttacca 330  Q
    ||||| |||||||||| || ||||||||||||||||||||||    
T  31362454 ttgaacccgtgaccttccaatcacatgacaacaactttacca 31362495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 325
Target Start/End: Original strand, 34074661 - 34074717
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactt 325  Q
    |||||||||||| ||| ||||||||   |||||||||||||||  ||||||||||||    
T  34074661 caagaggctgtttctaggacttgaacttgtgacctttcagtcatgtgacaacaactt 34074717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 8e-28; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 8247788 - 8247867
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8247788 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 8247867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 10870050 - 10870129
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10870050 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 10870129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 13730703 - 13730782
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  13730703 caagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 13730782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 46421136 - 46421215
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  46421136 caagaggctgtttccaggacttgaacccgtgacctttaagtcacatgacaacaactttaccagttgcgccaaggttaccc 46421215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 52926309 - 52926388
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  52926309 caagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 52926388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 1217148 - 1217069
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  1217148 caagaggctgtttccaggacttgaacccgtgacctttcagtgacatgactacaactttaccagttgcgccaaggttaccc 1217069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 7696984 - 7697063
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||| ||||| | | |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  7696984 caagagactgtttccaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagttgcgccaaggttaccc 7697063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 16735499 - 16735420
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  16735499 caagaggctgtttcgaggacttgaacccgtgacgttacagtcacatgacaacaactttaccagttgcgccaaggttaccc 16735420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 29366821 - 29366900
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  29366821 caagaggctgtttccaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagttacgccaaggttaccc 29366900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 268 - 348
Target Start/End: Complemental strand, 9607262 - 9607182
Alignment:
Q  268 gcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||||||||||| | | |||||||| |  ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9607262 gcaagaggctgtttccaggacttgaaccgatgacctttcagtcacatgacaacaactttacaagttgcgccaaggttaccc 9607182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 13628891 - 13628971
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaac-tttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  13628891 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttttaccagttgtgccaaggttaccc 13628971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 22609824 - 22609746
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | |||||||||| |||| ||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  22609824 caagaggctgtttccaagacttgaacccgttaccttacagtcacatgacaacaactttacc-gttgcgccaaggttaccc 22609746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 39203574 - 39203495
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| | |||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  39203574 caagaggctgtttcaaggacttgaacctgtgacctttcagtcacatgacaacaactttacaagttgtgccaaggttaccc 39203495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 40272911 - 40272990
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||||| |||| | | |||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  40272911 caagaggttgtttccaggacttgaacccatgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 40272990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 286 - 348
Target Start/End: Original strand, 4495780 - 4495842
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  4495780 gacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcgaaggttaccc 4495842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 5173819 - 5173899
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaac-tttaccagttgcgccaaggttaccc 348  Q
    ||||||| |||| | | |||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  5173819 caagaggttgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttttacgagttgcgccaaggttaccc 5173899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 6411920 - 6411999
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||||||||||   |||||||||| || |||||| ||||| |||||||||||||||||||||||||| |||||||||||    
T  6411920 caagaggctgtttacaagacttgaacccatgacctatcagttacatgacaacaactttaccagttgcgtcaaggttaccc 6411999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 12914134 - 12914213
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | ||||||||   |||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  12914134 caagaggctgtttccaggacttgaacttgtgacctttcggtcacattacaacaactttaccagttgcgccaaggttaccc 12914213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 271 - 338
Target Start/End: Complemental strand, 26869763 - 26869696
Alignment:
Q  271 agaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 338  Q
    |||||||||| | | |||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  26869763 agaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 26869696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 269 - 347
Target Start/End: Original strand, 22123014 - 22123092
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacc 347  Q
    |||||| ||||| | | |||||||| ||| |||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  22123014 caagagactgtttccaggacttgaacccgcgacctttcagtcacatgacaacaaatttaccagtggcgccaaggttacc 22123092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 26782407 - 26782341
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccctcag 352  Q
    |||||||||||||||||||||| || |||||||| |||||||||| ||||| |||||||||||||||    
T  26782407 gacttgaatccgtgacctttcaatcgcatgacaataactttaccaattgcgtcaaggttaccctcag 26782341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 25517300 - 25517348
Alignment:
Q  297 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 345  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  25517300 gtgaccttccagtcacatgacaacaactttaccagttgcgccaaggtta 25517348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 272 - 342
Target Start/End: Complemental strand, 26573182 - 26573113
Alignment:
Q  272 gaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    ||||||||| | | |||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||    
T  26573182 gaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc-gttgcgccaagg 26573113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 269 - 342
Target Start/End: Original strand, 34420743 - 34420815
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    |||||||||||| | | |||||||| |||||||||||||||||| |||||||||||||| | ||||||||||||    
T  34420743 caagaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaacttta-ctgttgcgccaagg 34420815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 269 - 342
Target Start/End: Original strand, 45620928 - 45621000
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    |||||||||||| | |  ||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||    
T  45620928 caagaggctgtttccagaacttgaacccgtgacctttcagtcacgtgacaacaactttacc-gttgcgccaagg 45621000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 348
Target Start/End: Complemental strand, 21875042 - 21874999
Alignment:
Q  305 tcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  21875042 tcagtcacatgacaacaactttaccagttgcgtcaaggttaccc 21874999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 12525465 - 12525389
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||| ||| | ||||||||||||||| ||||||||   |||||||||||||||||||||||||    
T  12525465 caagaggctgtttccaggactcgaacctgtgacctttcagtcatatgacaac---tttaccagttgcgccaaggttaccc 12525389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 272 - 329
Target Start/End: Complemental strand, 53062093 - 53062036
Alignment:
Q  272 gaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 329  Q
    ||||||||| | | ||||||||  ||||||||||||||||||||||||||||||||||    
T  53062093 gaggctgtttccaggacttgaacacgtgacctttcagtcacatgacaacaactttacc 53062036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 269 - 325
Target Start/End: Original strand, 30928246 - 30928302
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactt 325  Q
    |||||||||||| | | |||||||| ||||||||||||||||||||||||| |||||    
T  30928246 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaagaactt 30928302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 324
Target Start/End: Complemental strand, 7943048 - 7942993
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaact 324  Q
    ||||| |||||| | | ||||||||||||||||||| |||||||||||||||||||    
T  7943048 caagatgctgtttccaggacttgaatccgtgaccttccagtcacatgacaacaact 7942993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 350
Target Start/End: Complemental strand, 23871455 - 23871416
Alignment:
Q  311 acatgacaacaactttaccagttgcgccaaggttaccctc 350  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  23871455 acatgacaacaactttactagttgcgccaaggttaccctc 23871416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 319
Target Start/End: Complemental strand, 516467 - 516417
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaa 319  Q
    |||||||||||| | | |||||||| |||||||||||||||||||||||||    
T  516467 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaa 516417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 269 - 342
Target Start/End: Complemental strand, 35417974 - 35417902
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    |||||||||||| | | || |||||  |||||||| |||||||||||| |||||||||||| ||||||||||||    
T  35417974 caagaggctgtttccaggatttgaactcgtgacctctcagtcacatgataacaactttacc-gttgcgccaagg 35417902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 312 - 348
Target Start/End: Complemental strand, 9276289 - 9276253
Alignment:
Q  312 catgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||||||||||||||| |||||||||||||||||||    
T  9276289 catgacaacaactttactagttgcgccaaggttaccc 9276253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 342
Target Start/End: Complemental strand, 25944510 - 25944455
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    |||||||| || ||||||||||||||| |||||||||||||| | ||||||||||||    
T  25944510 gacttgaacccatgacctttcagtcacgtgacaacaacttta-ctgttgcgccaagg 25944455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 351
Target Start/End: Original strand, 53996665 - 53996746
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccctca 351  Q
    ||||||| |||| | | ||||||||  |||||||||||||||| |||||||||| |||||| || ||||||||| | ||||||    
T  53996665 caagaggttgtttccacgacttgaacacgtgacctttcagtcaaatgacaacaaatttacc-gtagcgccaaggctcccctca 53996746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 329
Target Start/End: Complemental strand, 19731060 - 19731000
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 329  Q
    ||||||||| || | | |||||| ||||||||||||||| |||| ||||||||| ||||||    
T  19731060 caagaggctatttccaggacttgcatccgtgacctttcaatcacgtgacaacaaatttacc 19731000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 329
Target Start/End: Complemental strand, 31542451 - 31542411
Alignment:
Q  289 ttgaatccgtgacctttcagtcacatgacaacaactttacc 329  Q
    |||||| |||||||||||| ||| |||||||||||||||||    
T  31542451 ttgaattcgtgacctttcaatcatatgacaacaactttacc 31542411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 344
Target Start/End: Complemental strand, 33235561 - 33235513
Alignment:
Q  297 gtgacctttca-gtcacatgacaacaactttaccagttgcgccaaggtt 344  Q
    ||||||||||| |||||||||||||||||||||||| |||  |||||||    
T  33235561 gtgacctttcatgtcacatgacaacaactttaccagctgcatcaaggtt 33235513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 8e-28; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 12024017 - 12024096
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12024017 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 12024096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 14530354 - 14530275
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14530354 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 14530275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 25079817 - 25079896
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||||| |||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  25079817 caagaggttgtttctaagacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 25079896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 222 - 348
Target Start/End: Complemental strand, 17896342 - 17896216
Alignment:
Q  222 tcccactatttggtgtattgtatacagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 321  Q
    |||||| ||||||| |||||||  |||||||||||||       |  ||||||| |||| ||| ||||||||||||||||||||| ||||||||||||||    
T  17896342 tcccaccatttggtatattgtacgcagccttaccctatttttttacacaagaggttgtttctaggacttgaatccgtgacctttcggtcacatgacaaca 17896243  T
Q  322 actttaccagttgcgccaaggttaccc 348  Q
    ||||||||||||||| |||||||||||    
T  17896242 actttaccagttgcgtcaaggttaccc 17896216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 8455415 - 8455494
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8455415 caagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 8455494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 10543734 - 10543655
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||| ||| | | |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10543734 caagaggccgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttatcagttgcgccaaggttaccc 10543655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 11514472 - 11514393
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | || ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  11514472 caagaggctgtttccaggagttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 11514393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 21779358 - 21779437
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||  | | |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21779358 caagaggctgtctccaggacttgaacccgtgacctttcagtcacatgacaacaacttcaccagttgcgccaaggttaccc 21779437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 23397802 - 23397723
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23397802 caagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcaccaaggttaccc 23397723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 220 - 348
Target Start/End: Original strand, 25249789 - 25249915
Alignment:
Q  220 gatcccactatttggtgtattgtatacagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaa 319  Q
    |||||||| |||||||||||||||  ||||||||||||        |  |||||| ||||| | | |||||||| |||||||||| ||||||||||||||    
T  25249789 gatcccaccatttggtgtattgtacgcagccttaccctgtttgtaca--caagagactgtttccatgacttgaacccgtgaccttacagtcacatgacaa 25249886  T
Q  320 caactttaccagttgcgccaaggttaccc 348  Q
    ||||||||||| |||||||||||||||||    
T  25249887 caactttaccaattgcgccaaggttaccc 25249915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 7214570 - 7214491
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||| ||||| | |||||||||| || ||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  7214570 caagagactgtttccaagacttgaacccatgacctttcagtcacatgacaacaactttaccagttgtgccaaagttaccc 7214491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 24200724 - 24200803
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| ||||||| |||||||||||||||||||||||||||||||||  |||||||||||    
T  24200724 caagaggctgtttccaggacttgaacccgtgacttttcagtcacatgacaacaactttaccagttgcatcaaggttaccc 24200803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 272 - 348
Target Start/End: Complemental strand, 22371090 - 22371014
Alignment:
Q  272 gaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||||||| | | |||||||| |||||||||  ||||||||||||||||||||||||||||| |||||||||||||    
T  22371090 gaggctgtttccaggacttgaacccgtgacctcccagtcacatgacaacaactttaccagttgggccaaggttaccc 22371014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 269 - 345
Target Start/End: Complemental strand, 27573657 - 27573581
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 345  Q
    |||||||||||| |   |||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27573657 caagaggctgttgcccggacttgaaccaatgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 27573581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 273 - 348
Target Start/End: Complemental strand, 5841060 - 5840985
Alignment:
Q  273 aggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||| ||| |||||||| |||||||||| |||||||||||||||||||||| || |||| ||||||||||||    
T  5841060 aggctgtttctaggacttgaacccgtgaccttccagtcacatgacaacaactttatcatttgcaccaaggttaccc 5840985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 17705531 - 17705452
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||| ||| | | |||||||| ||||||||||  ||||||||||||||||||||||||||||| ||||||||||||    
T  17705531 caagaggcggtttccaggacttgaacccgtgaccttctagtcacatgacaacaactttaccagttgcaccaaggttaccc 17705452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 19977814 - 19977892
Alignment:
Q  270 aagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||||||||| | |  ||||||| |||||||||||| |||||||||||||||||| ||||||| ||||||||||||||    
T  19977814 aagaggctgtttccagaacttgaacccgtgacctttcggtcacatgacaacaacttcaccagttccgccaaggttaccc 19977892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 269 - 342
Target Start/End: Original strand, 99362 - 99434
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    |||||||||||| ||| |||||||| |||||||||||||||||| |||||||||||||| | ||||||||||||    
T  99362 caagaggctgtttctaggacttgaacccgtgacctttcagtcacgtgacaacaacttta-ctgttgcgccaagg 99434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 9671217 - 9671137
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttc-agtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | || ||||| ||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||    
T  9671217 caagaggctgtttccaggatttgaacccgtgacatttccagtcacatgacaacaactttaccggttgcgccaaggttaccc 9671137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 300 - 348
Target Start/End: Complemental strand, 14544068 - 14544020
Alignment:
Q  300 acctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  14544068 acctttcagtcacatgacaacaactttaccaattgcgccaaggttaccc 14544020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 305 - 348
Target Start/End: Original strand, 39189556 - 39189599
Alignment:
Q  305 tcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  39189556 tcagtcacatgacaacaactttaccagttgcgccaaggttaccc 39189599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 269 - 342
Target Start/End: Original strand, 4516450 - 4516522
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    |||||||||||| |||  ||||||||  |||||||||||||||| |||||||||||||||| ||||||||||||    
T  4516450 caagaggctgtttctagaacttgaatatgtgacctttcagtcacgtgacaacaactttacc-gttgcgccaagg 4516522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 17668021 - 17667973
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagttg 334  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||    
T  17668021 gacttgaacccgtgaccttccagtcacatgacaacaactttaccagttg 17667973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 302 - 346
Target Start/End: Original strand, 27466262 - 27466306
Alignment:
Q  302 ctttcagtcacatgacaacaactttaccagttgcgccaaggttac 346  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  27466262 ctttcagtcacatgacaacaactttaccagttgcgccaatgttac 27466306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 298 - 348
Target Start/End: Original strand, 26684750 - 26684800
Alignment:
Q  298 tgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||| ||||||||||||||||||||||||||||| || |||||||    
T  26684750 tgacctttcaatcacatgacaacaactttaccagttgcgctaaagttaccc 26684800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 269 - 342
Target Start/End: Original strand, 17380335 - 17380407
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    ||||||| |||| | |||||||||| |||||||||||| ||||||||||||||||||  ||| |||||||||||    
T  17380335 caagaggttgtttccaagacttgaacccgtgacctttcggtcacatgacaacaacttcgcca-ttgcgccaagg 17380407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 269 - 334
Target Start/End: Complemental strand, 17623600 - 17623535
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttg 334  Q
    ||||||| |||| | | |||||||| |||||||||| ||||| |||||||||||||||||||||||    
T  17623600 caagaggttgtttcgaggacttgaacccgtgaccttccagtcgcatgacaacaactttaccagttg 17623535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 40416970 - 40417031
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 330  Q
    ||||||| |||| | | |||||||| |||||||||| |||||||||||||||||||||||||    
T  40416970 caagaggttgtttccatgacttgaacccgtgaccttccagtcacatgacaacaactttacca 40417031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 269 - 329
Target Start/End: Original strand, 21377172 - 21377232
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 329  Q
    ||||||| |||| ||| ||||||||  ||| ||||||||||||||||||||||||||||||    
T  21377172 caagaggatgtttctatgacttgaactcgtaacctttcagtcacatgacaacaactttacc 21377232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 39914431 - 39914475
Alignment:
Q  295 ccgtgacctttcagtcacatgacaacaactttaccagttgcgcca 339  Q
    |||||||||| |||||||||||||||||||||||||| |||||||    
T  39914431 ccgtgaccttccagtcacatgacaacaactttaccagatgcgcca 39914475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 348
Target Start/End: Complemental strand, 17473003 - 17472928
Alignment:
Q  273 aggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||| || ||||||| |||| ||||||||||||| |||  ||||||||||||||  ||||||| |||||||||||    
T  17473003 aggctatttctaagacctgaacccgtgacctttcaatcatttgacaacaactttattagttgcgtcaaggttaccc 17472928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 268 - 327
Target Start/End: Original strand, 31158539 - 31158598
Alignment:
Q  268 gcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaacttta 327  Q
    |||||||||||||   ||||||| || || ||||||||||||||||||||||||||||||    
T  31158539 gcaagaggctgttttgaagactttaacccttgacctttcagtcacatgacaacaacttta 31158598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 327
Target Start/End: Complemental strand, 5450301 - 5450263
Alignment:
Q  289 ttgaatccgtgacctttcagtcacatgacaacaacttta 327  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  5450301 ttgaacccgtgacctttcagtcacatgacaacaacttta 5450263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 341
Target Start/End: Original strand, 24860111 - 24860157
Alignment:
Q  295 ccgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 341  Q
    |||| ||||| ||||||||||||||||| ||||||||||||||||||    
T  24860111 ccgtaaccttccagtcacatgacaacaattttaccagttgcgccaag 24860157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 286 - 342
Target Start/End: Complemental strand, 35017837 - 35017781
Alignment:
Q  286 gacttgaatccgtgacctttca-gtcacatgacaacaactttaccagttgcgccaagg 342  Q
    ||||| || ||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  35017837 gacttaaacccgtgacctttcaagtcacatgacaacaactttacc-gttgcgccaagg 35017781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 269 - 333
Target Start/End: Complemental strand, 44604890 - 44604826
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagtt 333  Q
    ||||||| |||| | | |||||||| | |||||||| |||||||||||||||||||||| |||||    
T  44604890 caagaggttgtttccaggacttgaacctgtgaccttccagtcacatgacaacaactttagcagtt 44604826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 342
Target Start/End: Complemental strand, 44643557 - 44643486
Alignment:
Q  270 aagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    |||||||| || |||  |||||||  |||||||||||||||||||||  |||||||||||| |||||||||||    
T  44643557 aagaggctctttctagaacttgaacacgtgacctttcagtcacatgatgacaactttacca-ttgcgccaagg 44643486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 329
Target Start/End: Complemental strand, 33795304 - 33795261
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttacc 329  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||    
T  33795304 gacttgaacccgtgacctttcaatcacgtgacaacaactttacc 33795261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 320
Target Start/End: Complemental strand, 25641521 - 25641487
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaac 320  Q
    |||||||| ||||||||||||||||||||||||||    
T  25641521 gacttgaacccgtgacctttcagtcacatgacaac 25641487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 328
Target Start/End: Original strand, 45235918 - 45235976
Alignment:
Q  270 aagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttac 328  Q
    ||||| ||||| ||| ||||||||  ||||| ||||||||||||||| |||||||||||    
T  45235918 aagagactgtttctaggacttgaactcgtgatctttcagtcacatgagaacaactttac 45235976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 329
Target Start/End: Original strand, 23145812 - 23145857
Alignment:
Q  284 aagacttgaatccgtgacctttcagtcacatgacaacaactttacc 329  Q
    |||||||||| ||||||||||||||||||   ||||||||||||||    
T  23145812 aagacttgaacccgtgacctttcagtcacgctacaacaactttacc 23145857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 329
Target Start/End: Original strand, 23557602 - 23557647
Alignment:
Q  284 aagacttgaatccgtgacctttcagtcacatgacaacaactttacc 329  Q
    |||||||||| ||||||||||||||||||   ||||||||||||||    
T  23557602 aagacttgaacccgtgacctttcagtcacgctacaacaactttacc 23557647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 328
Target Start/End: Original strand, 34752779 - 34752820
Alignment:
Q  287 acttgaatccgtgacctttcagtcacatgacaacaactttac 328  Q
    |||||||| ||||||||||||||||||||| ||||| |||||    
T  34752779 acttgaattcgtgacctttcagtcacatgataacaagtttac 34752820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 346
Target Start/End: Original strand, 39499353 - 39499390
Alignment:
Q  309 tcacatgacaacaactttaccagttgcgccaaggttac 346  Q
    |||||||| |||||||||||||||||||||||| ||||    
T  39499353 tcacatgataacaactttaccagttgcgccaagattac 39499390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 329
Target Start/End: Original strand, 29419988 - 29420048
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 329  Q
    ||||||| |||| | | ||||||||  ||||||||||||||||  ||||||||||||||||    
T  29419988 caagaggttgtttccaggacttgaactcgtgacctttcagtcatgtgacaacaactttacc 29420048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 8e-28; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 34725195 - 34725274
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34725195 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 34725274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 32632655 - 32632734
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  32632655 caagaggctgtttccaggacttgaacccgtgacctttcagtcatatgacaacaactttaccagttgcgccaaggttaccc 32632734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 38478379 - 38478458
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| ||| |||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  38478379 caagaggctgtttctaggacttgaacccgtgacctttcagtcacatgacaacaagtttactagttgcgccaaggttaccc 38478458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 46248052 - 46248131
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | |||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  46248052 caagaggctgtttccaagacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgagccaaggttaccc 46248131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 14617097 - 14617018
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | ||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  14617097 caagaggctgtttccaggacttgaactcgtgacctttcagtcacatgacaacaactttaccggttgcgccaaggttaccc 14617018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 18944702 - 18944623
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | | |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18944702 caagaggctgtttccaggccttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 18944623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 273 - 348
Target Start/End: Original strand, 22930170 - 22930245
Alignment:
Q  273 aggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||| | | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22930170 aggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 22930245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 47214570 - 47214491
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||| ||||| | | |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  47214570 caagagactgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaagttaccc 47214491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 348
Target Start/End: Complemental strand, 34714665 - 34714603
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  34714665 gacttgaacccgtgacctttcaatcacatgacaacaactttaccagttgcgccaaggttaccc 34714603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 348
Target Start/End: Complemental strand, 40424784 - 40424722
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40424784 gacttgaacccgtggcctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 40424722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 271 - 348
Target Start/End: Original strand, 20004193 - 20004270
Alignment:
Q  271 agaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||| | | |||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  20004193 agaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaaggttaccc 20004270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 284 - 349
Target Start/End: Complemental strand, 25290207 - 25290142
Alignment:
Q  284 aagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccct 349  Q
    ||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  25290207 aagacttgaacacgtgacctttcagtcacatgacaacaactttacctgttgcgccaaggttaccct 25290142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 30395827 - 30395903
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 345  Q
    |||||||||||| | | |||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  30395827 caagaggctgtttccaggacttgaacccgtgaccttaaagtcacatgacaacaactttaccagttgcgccaaggtta 30395903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 269 - 341
Target Start/End: Complemental strand, 33223043 - 33222971
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 341  Q
    |||||||||||| | | ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  33223043 caagaggctgtttccatgacttaaatccgtgacctttcagtcacatgacaacaactttaccggttgcgccaag 33222971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 279 - 346
Target Start/End: Original strand, 18742070 - 18742137
Alignment:
Q  279 ttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttac 346  Q
    |||| |||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18742070 ttcccaagatttgaacccttgacctttcagtcacatgacaacaactttaccagttgcgccaaggttac 18742137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 269 - 352
Target Start/End: Original strand, 23768419 - 23768502
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccctcag 352  Q
    |||||||||||| | | |||||||| | |||||||| ||||||||||||||||||||||||||||||| | |||||||||||||    
T  23768419 caagaggctgtttccatgacttgaacctgtgaccttacagtcacatgacaacaactttaccagttgcgtcgaggttaccctcag 23768502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 27474340 - 27474261
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||| ||||| | |||||||||| | |||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  27474340 caagagactgtttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgagctaaggttaccc 27474261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 46991863 - 46991784
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||||| |||| | | |||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  46991863 caagaggttgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaaggttaccc 46991784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 286 - 348
Target Start/End: Complemental strand, 8197085 - 8197023
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  8197085 gacttgaacccgtgacctttcagtcacatgacaacaacttgaccagttgcaccaaggttaccc 8197023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 286 - 348
Target Start/End: Original strand, 45812651 - 45812713
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  45812651 gacttgaacctgtgacctttcagtcacatgacaacaactttatcagttgcgccaaggttaccc 45812713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 270 - 347
Target Start/End: Complemental strand, 19414497 - 19414420
Alignment:
Q  270 aagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacc 347  Q
    |||||||| || ||| |||||||| ||||||||||||||||| |||||||||||||||||| || |||||||||||||    
T  19414497 aagaggctctttctaggacttgaacccgtgacctttcagtcatatgacaacaactttaccaattacgccaaggttacc 19414420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 19932869 - 19932930
Alignment:
Q  287 acttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19932869 acttgaacccatgacctttcagtcacatgacaacaactttaccagttgcgccaaggtaaccc 19932930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 10668284 - 10668200
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacat-----gacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| ||||||||||||||||||||     ||||||||||||||||||||||||||||||||||    
T  10668284 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatcacatgacaacaactttaccagttgcgccaaggttaccc 10668200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 269 - 341
Target Start/End: Original strand, 18724644 - 18724715
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 341  Q
    |||||||||||| | | |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  18724644 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc-gttgcgccaag 18724715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 27201706 - 27201627
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| || ||||||||||||||||||||||||||||||||| || ||| ||||||||||    
T  27201706 caagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccatttacgctaaggttaccc 27201627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 269 - 346
Target Start/End: Complemental strand, 45402153 - 45402077
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttac 346  Q
    |||||||||||| | | |||||||| |||| ||||| || ||||||||||||||||||||||||||||||||||||||    
T  45402153 caagaggctgtttccaggacttgaacccgttaccttcca-tcacatgacaacaactttaccagttgcgccaaggttac 45402077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 286 - 341
Target Start/End: Complemental strand, 20036262 - 20036208
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 341  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  20036262 gacttgaacccgtgacctttcagtcacatgacaacaactttacca-ttgcgccaag 20036208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 297 - 348
Target Start/End: Original strand, 41319933 - 41319984
Alignment:
Q  297 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  41319933 gtgacctttcagtcacatgacaacaactttaccagttgtgtcaaggttaccc 41319984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 272 - 342
Target Start/End: Original strand, 2435889 - 2435958
Alignment:
Q  272 gaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    ||||||||| | | |||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||    
T  2435889 gaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc-gttgcgccaagg 2435958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 4430140 - 4430197
Alignment:
Q  284 aagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 341  Q
    ||||||| || |||||||||| |||||||||||||||||||||||||| |||||||||    
T  4430140 aagacttaaacccgtgaccttccagtcacatgacaacaactttaccagctgcgccaag 4430197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 269 - 345
Target Start/End: Complemental strand, 9939520 - 9939443
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaac-tttaccagttgcgccaaggtta 345  Q
    ||||||| |||| | | ||||||||  |||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  9939520 caagaggttgtttccaggacttgaactcgtgacctttcagtcacatgacaacaacttttaccggttgcgccaaggtta 9939443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 342
Target Start/End: Complemental strand, 52910275 - 52910204
Alignment:
Q  270 aagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    ||||||||||| | |||| ||||| | ||||||||||||||||||||||||||||||||| ||||| ||||||    
T  52910275 aagaggctgtttccaagagttgaacctgtgacctttcagtcacatgacaacaactttacc-gttgcaccaagg 52910204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 332
Target Start/End: Complemental strand, 6925159 - 6925096
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagt 332  Q
    ||||||||| || | | |||||||| |||||||||| |||||||||||||||||||||||||||    
T  6925159 caagaggctatttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagt 6925096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 24564403 - 24564324
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||||| |||| | |||||||||||| | ||||||||| ||||| |||| |||||||||  ||||||||||||||||||    
T  24564403 caagaggttgtttccaagacttgaatctgcgacctttcaatcacaagacatcaactttactggttgcgccaaggttaccc 24564324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 272 - 342
Target Start/End: Original strand, 6983911 - 6983980
Alignment:
Q  272 gaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    ||||||||| | | |||||||| | |||||||||||||||| ||||||||||||||||| |||||||||||    
T  6983911 gaggctgtttccaggacttgaacctgtgacctttcagtcacgtgacaacaactttacca-ttgcgccaagg 6983980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 12126960 - 12127010
Alignment:
Q  295 ccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 345  Q
    ||||||||||||| | |||||||||||||||||| ||||||||||||||||    
T  12126960 ccgtgacctttcaattacatgacaacaactttacgagttgcgccaaggtta 12127010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 269 - 351
Target Start/End: Complemental strand, 50811998 - 50811917
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccctca 351  Q
    ||||| |||||| | | ||| ||| ||||||||||||||||||| |||||||||||||||| |||||||||||| | ||||||    
T  50811998 caagaagctgtttccaggacatgattccgtgacctttcagtcacgtgacaacaactttacc-gttgcgccaaggctcccctca 50811917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 269 - 342
Target Start/End: Original strand, 17470445 - 17470517
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    |||||||||||| ||| |||||||| || ||||| ||||||||| |||||||||||||||| ||||| ||||||    
T  17470445 caagaggctgtttctaggacttgaacccatgaccattcagtcacgtgacaacaactttacc-gttgcaccaagg 17470517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 269 - 342
Target Start/End: Complemental strand, 22327158 - 22327086
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    ||||||| |||| | | |||||||| ||| |||||||||||||||||||||||||||| || ||||||||||||    
T  22327158 caagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaactttgcc-gttgcgccaagg 22327086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 286 - 342
Target Start/End: Original strand, 2436009 - 2436064
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    |||||||| |||||||||||||||||| |||||||||||||||| ||||| ||||||    
T  2436009 gacttgaacccgtgacctttcagtcacgtgacaacaactttacc-gttgcaccaagg 2436064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 269 - 341
Target Start/End: Complemental strand, 11596572 - 11596501
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 341  Q
    ||||||| |||| ||| |||||||| ||||||| |||||||||||||||| | |||||||| |||||||||||    
T  11596572 caagaggttgtttctaggacttgaacccgtgacatttcagtcacatgacagccactttacc-gttgcgccaag 11596501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 286 - 342
Target Start/End: Complemental strand, 35019272 - 35019217
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    |||||||||| |||||||||||||||  |||||||||||||||| ||||||||||||    
T  35019272 gacttgaatctgtgacctttcagtcatgtgacaacaactttacc-gttgcgccaagg 35019217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 269 - 329
Target Start/End: Original strand, 35117867 - 35117927
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 329  Q
    ||||||||| || | | |||||||| |||||||||||||||||| ||||||||||||||||    
T  35117867 caagaggctatttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 35117927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 347
Target Start/End: Original strand, 18335415 - 18335465
Alignment:
Q  297 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacc 347  Q
    |||||||||||| |||||||||| ||||||| || ||||||||||||||||    
T  18335415 gtgacctttcagacacatgacaaaaactttatcacttgcgccaaggttacc 18335465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 306 - 348
Target Start/End: Complemental strand, 21723686 - 21723644
Alignment:
Q  306 cagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||||||||||||||||||||||||||| || ||||||||||    
T  21723686 cagtcacatgacaacaactttaccagttgtgcgaaggttaccc 21723644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 298 - 347
Target Start/End: Complemental strand, 21006174 - 21006125
Alignment:
Q  298 tgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacc 347  Q
    ||||||||||||| ||||||||||| |||||| |||||| ||||||||||    
T  21006174 tgacctttcagtcgcatgacaacaattttaccggttgcgtcaaggttacc 21006125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 269 - 342
Target Start/End: Original strand, 50760325 - 50760397
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    ||||||||||||   | |||||||| ||||||||| |||||||||||||||| ||||||||  |||||||||||    
T  50760325 caagaggctgttttcaggacttgaacccgtgacctctcagtcacatgacaactactttacc-tttgcgccaagg 50760397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 342
Target Start/End: Original strand, 10378841 - 10378896
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    |||||||| |||| ||||||||||||| |||||||||||||||| ||||| ||||||    
T  10378841 gacttgaacccgtaacctttcagtcacgtgacaacaactttacc-gttgcaccaagg 10378896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 348
Target Start/End: Original strand, 18335973 - 18336024
Alignment:
Q  297 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| |||||| ||||||||||| || |||||||||| ||||||    
T  18335973 gtgacctttcagacacatggcaacaactttatcacttgcgccaagattaccc 18336024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 328
Target Start/End: Original strand, 25468362 - 25468421
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttac 328  Q
    ||||||| |||| | | |||||||| || |||||||||| ||||||||||||||||||||    
T  25468362 caagaggttgtttccaggacttgaacccatgacctttcaatcacatgacaacaactttac 25468421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 344
Target Start/End: Original strand, 28894658 - 28894704
Alignment:
Q  297 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtt 344  Q
    ||||| ||||||||||||||||||||||||| | ||||||||||||||    
T  28894658 gtgacttttcagtcacatgacaacaacttta-ctgttgcgccaaggtt 28894704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 342
Target Start/End: Original strand, 44485234 - 44485280
Alignment:
Q  295 ccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    ||||||||||||| ||||||||||||||||||| | ||||||||||||    
T  44485234 ccgtgacctttcaatcacatgacaacaacttta-ctgttgcgccaagg 44485280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 348
Target Start/End: Complemental strand, 10163777 - 10163739
Alignment:
Q  310 cacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  10163777 cacatgacaacaactttatcagttgcgccaatgttaccc 10163739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 342
Target Start/End: Original strand, 15511278 - 15511322
Alignment:
Q  297 gtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    |||||||||||| ||||| ||||||||||||||| |||||||||||    
T  15511278 gtgacctttcagccacattacaacaactttacca-ttgcgccaagg 15511322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 342
Target Start/End: Complemental strand, 19701629 - 19701557
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    ||||||||||||   | ||||| || ||||||| ||||||||||| ||||||||||||| | ||||||||||||    
T  19701629 caagaggctgttttcatgacttaaacccgtgacatttcagtcacacgacaacaacttta-ctgttgcgccaagg 19701557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 342
Target Start/End: Complemental strand, 23371183 - 23371111
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    |||| ||||||| ||| |||||||| |||||||||||||||||   || |||||||||| | ||||||||||||    
T  23371183 caagtggctgtttctaggacttgaacccgtgacctttcagtcatgcgaaaacaacttta-ctgttgcgccaagg 23371111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 4212208 - 4212268
Alignment:
Q  287 acttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacc 347  Q
    ||||||||  ||||||||||||||| |||| |||||||||||  || ||| ||||||||||    
T  4212208 acttgaatatgtgacctttcagtcatatgataacaactttactcgtcgcgtcaaggttacc 4212268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 62; Significance: 1e-26; HSPs: 4)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 269 - 350
Target Start/End: Original strand, 10147 - 10228
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccctc 350  Q
    |||||||||||| | | |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  10147 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgtcaaggttaccctc 10228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 269 - 350
Target Start/End: Original strand, 20475 - 20556
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccctc 350  Q
    |||||||||||| | | |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  20475 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgtcaaggttaccctc 20556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 286 - 348
Target Start/End: Complemental strand, 8964 - 8902
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||| | ||||| ||||||||||||||||||||||| ||| ||||||||||||||||||    
T  8964 gacttgaacctgtgacatttcagtcacatgacaacaacttcaccggttgcgccaaggttaccc 8902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 286 - 348
Target Start/End: Complemental strand, 19292 - 19230
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||| | ||||| ||||||||||||||||||||||| ||| ||||||||||||||||||    
T  19292 gacttgaacctgtgacatttcagtcacatgacaacaacttcaccggttgcgccaaggttaccc 19230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 1e-26; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 222 - 348
Target Start/End: Complemental strand, 32758341 - 32758218
Alignment:
Q  222 tcccactatttggtgtattgtatacagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 321  Q
    |||||| ||||||||||||||| |||||||||||||        |  |||||||||||| | | |||||||| | |||||||||||||||||||||||||    
T  32758341 tcccaccatttggtgtattgtacacagccttaccct---gttttacacaagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaaca 32758245  T
Q  322 actttaccagttgcgccaaggttaccc 348  Q
    |||||||||||||||||||||||||||    
T  32758244 actttaccagttgcgccaaggttaccc 32758218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 21172106 - 21172185
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  21172106 caagaggctgtttccaggacttgaacccgtgacctttcagttacatgacaacaactttaccagttgcgccaaggttaccc 21172185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 42495934 - 42496013
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  42495934 caagaggctgtttccaggacttgaacccgtgacctttcagtcatatgacaacaactttaccagttgcgccaaggttaccc 42496013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 42798705 - 42798626
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||| ||||| | |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  42798705 caagagactgtttccaagacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 42798626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 47077952 - 47078031
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||| ||||| | | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47077952 caagagactgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 47078031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 286 - 348
Target Start/End: Original strand, 48735237 - 48735299
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48735237 gacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 48735299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 2541118 - 2541198
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttc-agtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2541118 caagaggctgtttccaggacttgaacccgtgacctttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 2541198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 269 - 344
Target Start/End: Original strand, 10693170 - 10693245
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtt 344  Q
    |||||||||||| | | |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10693170 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttactagttgcgccaaggtt 10693245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 42805560 - 42805481
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  42805560 caagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttacgccaaggttaccc 42805481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 43557508 - 43557429
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  43557508 caagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcggcaaggttaccc 43557429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 269 - 345
Target Start/End: Complemental strand, 40463913 - 40463837
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 345  Q
    |||||| ||||| ||| |||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  40463913 caagagactgtttctatgacttgaacccgtgaccttacagtcacatgacaacaactttaccggttgcgccaaggtta 40463837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 7193121 - 7193042
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||||| |||| | | |||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  7193121 caagaggttgtttcgaggacttgaacccgtgacctttcagtcacatgacaacaactttacaagttacgccaaggttaccc 7193042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 272 - 347
Target Start/End: Original strand, 14732924 - 14732999
Alignment:
Q  272 gaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacc 347  Q
    ||||||||| | | |||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  14732924 gaggctgtttccaggacttgaacccatgacttttcagtcacatgacaacaactttaccagttgcgccaaggttacc 14732999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 18327070 - 18326991
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| |   |||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  18327070 caagaggctgtttccgggacttgaacccgtgaccttcaagtcacatgacaacaactttaccagttgcgccaaggttaccc 18326991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 269 - 340
Target Start/End: Original strand, 19426988 - 19427059
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaa 340  Q
    |||||||||||| | | |||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  19426988 caagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccagttgcgccaa 19427059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 46354230 - 46354151
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||||| |||| | | |||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  46354230 caagaggttgtttccaggacttgaacccgtgaccttccaatcacatgacaacaactttaccagttgcgccaaggttaccc 46354151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 269 - 343
Target Start/End: Complemental strand, 27629670 - 27629596
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggt 343  Q
    |||||||||||| | | |||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||    
T  27629670 caagaggctgtttccaggacttgaacccgtgacctttcggtcaaatgacaacaactttaccagttgcgccaaggt 27629596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 42476891 - 42476830
Alignment:
Q  287 acttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||    
T  42476891 acttgaatccgtgaccttttagtcacatgacaacaactttaccagttacgccaatgttaccc 42476830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 270 - 346
Target Start/End: Original strand, 7794606 - 7794682
Alignment:
Q  270 aagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttac 346  Q
    ||||||||||| | | |||||||| |||||||||| ||||||||| |||||||||||||||||||||| ||||||||    
T  7794606 aagaggctgtttccaggacttgaacccgtgaccttccagtcacataacaacaactttaccagttgcgctaaggttac 7794682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 272 - 348
Target Start/End: Original strand, 34626309 - 34626385
Alignment:
Q  272 gaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||||||| | | |||||||||| ||| ||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  34626309 gaggctgtttccaggacttgaatctgtggcctttcaatcacatgacaacaactttaccagttgcgctaaggttaccc 34626385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 5180276 - 5180335
Alignment:
Q  289 ttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5180276 ttgaacccttgacctttcagtcacatgacaacaactttaccagttgcgtcaaggttaccc 5180335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 269 - 344
Target Start/End: Original strand, 11617687 - 11617762
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtt 344  Q
    ||||||| |||| | | |||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||    
T  11617687 caagaggttgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccgaggtt 11617762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 21447626 - 21447547
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||||||||||   ||||||||||||||||||||| || | |||||||||||| |||| ||||||||||||||||||||    
T  21447626 caagaggctgttttcaagacttgaatccgtgaccttccaattacatgacaacaaatttatcagttgcgccaaggttaccc 21447547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 287 - 350
Target Start/End: Original strand, 29140477 - 29140540
Alignment:
Q  287 acttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccctc 350  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  29140477 acttgaatgtgtgacctttcagttacatgacaacaactttaccagttgcgccaagattaccctc 29140540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 286 - 345
Target Start/End: Original strand, 35334930 - 35334989
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 345  Q
    ||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  35334930 gacttgaactcgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggtta 35334989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 47716495 - 47716416
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| |||||||||| |||||||||| |||||||||| ||||||| |||||||||||||    
T  47716495 caagaggctgtttccaggacttgaacccgtgaccttccagtcacatggcaacaacttttccagttgtgccaaggttaccc 47716416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 286 - 348
Target Start/End: Original strand, 22699086 - 22699148
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||| || | ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22699086 gacttgaacccataacctttcagtcacatgacaacaactttaccagttgcgtcaaggttaccc 22699148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 289 - 345
Target Start/End: Original strand, 1424029 - 1424085
Alignment:
Q  289 ttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 345  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||    
T  1424029 ttgaatccgtgaccttccagtcacataacaacaactttaccagttgcgccaaagtta 1424085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 276 - 348
Target Start/End: Original strand, 28078237 - 28078309
Alignment:
Q  276 ctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||| ||| |||||||| |||||||||| |||||||||||||||||||| || |||||||||| ||||||||    
T  28078237 ctgtttctaggacttgaacccgtgaccttacagtcacatgacaacaacttcacgagttgcgccagggttaccc 28078309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 342
Target Start/End: Original strand, 3469286 - 3469350
Alignment:
Q  277 tgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    |||| ||| ||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||    
T  3469286 tgtttctaggacttgagtctgtgacctttcagtcacatgacaacaactttacc-gttgcgccaagg 3469350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 269 - 342
Target Start/End: Original strand, 28362244 - 28362316
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    |||||||| ||| ||| |||||||| | |||||||||||| |||||||||||||||||||| ||||||||||||    
T  28362244 caagaggcagtttctaggacttgaacctgtgacctttcagccacatgacaacaactttacc-gttgcgccaagg 28362316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 342
Target Start/End: Complemental strand, 13805121 - 13805066
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    |||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||    
T  13805121 gacttgaacccgttacctttcagtcacatgacaacaactttacca-ttgcgccaagg 13805066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 340
Target Start/End: Complemental strand, 19265836 - 19265781
Alignment:
Q  284 aagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaa 340  Q
    |||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||    
T  19265836 aagacttgaacccgtgacctttcagtcacgtgacaacaactttacc-gttgcgccaa 19265781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 329
Target Start/End: Complemental strand, 29907455 - 29907393
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatg--acaacaactttacc 329  Q
    |||||||||||| ||| |||||||| |||||||||||||||||||||  ||||||||||||||    
T  29907455 caagaggctgtttctaggacttgaacccgtgacctttcagtcacatgatacaacaactttacc 29907393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 286 - 348
Target Start/End: Original strand, 8149062 - 8149124
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||||||  |||||| || |||||||||||||||||| |||||||||| |||||||||||||    
T  8149062 gacttgaactcgtgactttgcagtcacatgacaacaacattaccagttgtgccaaggttaccc 8149124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 286 - 348
Target Start/End: Complemental strand, 12473323 - 12473261
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||| || |||||||||||  ||||||||||||||||||| |||||||||||| |||||    
T  12473323 gacttgaacccatgacctttcagatacatgacaacaactttaccggttgcgccaaggctaccc 12473261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 302 - 348
Target Start/End: Complemental strand, 25198725 - 25198679
Alignment:
Q  302 ctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||    
T  25198725 ctttcagtcatatgacaacaactttaccagttacgccaaggttaccc 25198679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 269 - 331
Target Start/End: Original strand, 33872008 - 33872070
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccag 331  Q
    ||||||| |||| | | |||||||| ||| |||||||||||||||||||||||||||||||||    
T  33872008 caagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaactttaccag 33872070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 269 - 342
Target Start/End: Original strand, 48123583 - 48123655
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    |||||||||||| | | |||||||| || ||||||||||| ||||||| |||||||||||| ||||||||||||    
T  48123583 caagaggctgtttccaggacttgaacccatgacctttcagacacatgataacaactttacc-gttgcgccaagg 48123655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 306 - 348
Target Start/End: Original strand, 2663067 - 2663109
Alignment:
Q  306 cagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||||||| ||||||||||||| |||||||||||||||||||    
T  2663067 cagtcacataacaacaactttactagttgcgccaaggttaccc 2663109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 328
Target Start/End: Complemental strand, 6736909 - 6736867
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttac 328  Q
    |||||||| |||||||||||||||| |||||||||||||||||    
T  6736909 gacttgaacccgtgacctttcagtcgcatgacaacaactttac 6736867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 335
Target Start/End: Original strand, 28685257 - 28685299
Alignment:
Q  293 atccgtgacctttcagtcacatgacaacaactttaccagttgc 335  Q
    |||||||| |||||||||||||||||||||||||| |||||||    
T  28685257 atccgtgatctttcagtcacatgacaacaactttaacagttgc 28685299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 339
Target Start/End: Complemental strand, 39123926 - 39123857
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgcca 339  Q
    |||||| | ||| ||| |||||||| ||||| | |||||||||||||||||||||||||||| ||||||||    
T  39123926 caagagaccgtttctaggacttgaacccgtgtcgtttcagtcacatgacaacaactttacca-ttgcgcca 39123857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 323
Target Start/End: Original strand, 42391197 - 42391251
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaac 323  Q
    ||||| |||||| | | |||||||| |||||||||||||||||||||||||||||    
T  42391197 caagaagctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaac 42391251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 7644992 - 7644931
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 330  Q
    |||||||||||| | | |||||||| |||||||||||||||||| | ||||||| |||||||    
T  7644992 caagaggctgtttccaggacttgaacccgtgacctttcagtcacgttacaacaaatttacca 7644931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 269 - 342
Target Start/End: Original strand, 23419773 - 23419845
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    |||||||||||| | |  ||||||| | ||||||||| |||||||||||| |||||||||| ||||||||||||    
T  23419773 caagaggctgtttccagaacttgaacctgtgaccttttagtcacatgacagcaactttacc-gttgcgccaagg 23419845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 326
Target Start/End: Complemental strand, 11741814 - 11741774
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaacttt 326  Q
    |||||||| || |||||||||||||||||||||||||||||    
T  11741814 gacttgaacccatgacctttcagtcacatgacaacaacttt 11741774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 342
Target Start/End: Complemental strand, 19266469 - 19266414
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    |||||||| ||  ||||||||||||||||||||||||||||||| ||||| ||||||    
T  19266469 gacttgaacccacgacctttcagtcacatgacaacaactttacc-gttgcaccaagg 19266414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 329
Target Start/End: Original strand, 14099134 - 14099165
Alignment:
Q  298 tgacctttcagtcacatgacaacaactttacc 329  Q
    ||||||||||||||||||||||||||||||||    
T  14099134 tgacctttcagtcacatgacaacaactttacc 14099165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 329
Target Start/End: Original strand, 14409151 - 14409182
Alignment:
Q  298 tgacctttcagtcacatgacaacaactttacc 329  Q
    ||||||||||||||||||||||||||||||||    
T  14409151 tgacctttcagtcacatgacaacaactttacc 14409182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 348
Target Start/End: Original strand, 45019007 - 45019054
Alignment:
Q  301 cctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||| |||||||||||||  | ||||||||||||||||||||||||||    
T  45019007 ccttccagtcacatgacaggacctttaccagttgcgccaaggttaccc 45019054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 342
Target Start/End: Original strand, 44123720 - 44123792
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    |||||||||||| | |  ||||||| |||| | ||||||||||||||||| |||||||||| ||||| ||||||    
T  44123720 caagaggctgtttccagtacttgaacccgtaatctttcagtcacatgacaccaactttacc-gttgcaccaagg 44123792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 329
Target Start/End: Original strand, 1524285 - 1524345
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 329  Q
    ||||||||||||  |||||||||||   |||||||||||||| | ||||||| ||||||||    
T  1524285 caagaggctgtttataagacttgaacttgtgacctttcagtctcgtgacaaccactttacc 1524345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 343
Target Start/End: Complemental strand, 5814489 - 5814433
Alignment:
Q  287 acttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggt 343  Q
    ||||||| ||||||| || || |||||| ||||||||||||||  ||||||||||||    
T  5814489 acttgaacccgtgactttccaatcacataacaacaactttaccgattgcgccaaggt 5814433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 329
Target Start/End: Complemental strand, 16341314 - 16341254
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 329  Q
    |||||||||||| |||  ||||||| |||||||||||||   |||||| ||||||||||||    
T  16341314 caagaggctgtttctagaacttgaacccgtgacctttcaaatacatgataacaactttacc 16341254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 351
Target Start/End: Original strand, 35787383 - 35787419
Alignment:
Q  315 gacaacaactttaccagttgcgccaaggttaccctca 351  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  35787383 gacaacaactttaccggttgcaccaaggttaccctca 35787419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 5e-26; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 269 - 341
Target Start/End: Original strand, 12222016 - 12222088
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 341  Q
    |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  12222016 caagaggctgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 12222088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 1347000 - 1346921
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||| ||||||| | | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1347000 caagtggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 1346921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 1354854 - 1354933
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1354854 caagaggctgtttccaggacttgaaccagtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 1354933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 8409279 - 8409200
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||| ||| | | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8409279 caagaggcagtttccaggacttgaatccgtgacctttcagtcacattacaacaactttaccagttgcgccaaggttaccc 8409200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 14975179 - 14975255
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 345  Q
    |||||||||||| | | ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  14975179 caagaggctgtttccaggacttgaatccgtgaccttccagtcacatgacaacaactttaccggttgcgccaaggtta 14975255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 348
Target Start/End: Original strand, 3815193 - 3815255
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  3815193 gacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 3815255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 269 - 350
Target Start/End: Complemental strand, 12063503 - 12063422
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccctc 350  Q
    ||||||||| || ||| |||||||| |||||||||||||||| ||||| |||||||||| ||||||| ||||||||||||||    
T  12063503 caagaggctatttctaggacttgaacccgtgacctttcagtctcatgataacaactttatcagttgcaccaaggttaccctc 12063422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 29355956 - 29356036
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaa-ctttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| ||||||||||||||||||||||||||||  ||||||||||| |||||||||||||    
T  29355956 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaatttttaccagttgtgccaaggttaccc 29356036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 9161159 - 9161080
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| | |||||||||||||||||||||||||||||||||  ||||| |||||||||||    
T  9161159 caagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccgattgcgtcaaggttaccc 9161080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 298 - 347
Target Start/End: Complemental strand, 24734640 - 24734591
Alignment:
Q  298 tgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacc 347  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24734640 tgacctttcagtcacatgacaacaactttaccagttgcgccaatgttacc 24734591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 270 - 351
Target Start/End: Original strand, 32728256 - 32728337
Alignment:
Q  270 aagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccctca 351  Q
    |||||| |||| | || ||||||||| ||||||||||||||||||||||||||||||||  ||| | |||||||||||||||    
T  32728256 aagaggttgtttccaaaacttgaatctgtgacctttcagtcacatgacaacaactttactcgttccaccaaggttaccctca 32728337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 20400685 - 20400625
Alignment:
Q  287 acttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacc 347  Q
    ||||||| | |||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  20400685 acttgaacctgtgacctttcagtcacatgacaacaactataccaattgcgccaaggttacc 20400625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 268 - 348
Target Start/End: Original strand, 33922926 - 33923006
Alignment:
Q  268 gcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||||||  ||| ||| |||||||| | ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||    
T  33922926 gcaagaggacgtttctaggacttgaacctgtgacttttcagtcaaatgacaacaactttaccggttgcgccaaggttaccc 33923006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 6024269 - 6024202
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcg 336  Q
    |||||||||||| ||| || ||||| |||||||||| || ||||||||||||||||||||||||||||    
T  6024269 caagaggctgtttctaggatttgaaaccgtgaccttccaatcacatgacaacaactttaccagttgcg 6024202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 286 - 348
Target Start/End: Complemental strand, 1941874 - 1941812
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||| |||||| |||||| |||||| ||||||||||||||||||||||| ||||||||||||    
T  1941874 gacttcaatccgcgaccttccagtcagatgacaacaactttaccagttgcaccaaggttaccc 1941812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 286 - 344
Target Start/End: Original strand, 13905095 - 13905152
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtt 344  Q
    |||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  13905095 gacttgagcccgtgacctttcagtcacatgacaacaactttacc-gttgcgccaaggtt 13905152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 15866137 - 15866215
Alignment:
Q  270 aagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||||||||| | | || ||||| || |||||||||| ||||||| |||||||||||||||||| |||||||||||||    
T  15866137 aagaggctgtttccaggaattgaacccatgacctttcaatcacatgccaacaactttaccagttgggccaaggttaccc 15866215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 269 - 346
Target Start/End: Original strand, 2166511 - 2166587
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttac 346  Q
    ||||||| |||| | | |||||||| |||||||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  2166511 caagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttactagttgcg-caaggttac 2166587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 269 - 346
Target Start/End: Original strand, 2178144 - 2178220
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttac 346  Q
    ||||||| |||| | | |||||||| |||||||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  2178144 caagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttactagttgcg-caaggttac 2178220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 292 - 341
Target Start/End: Original strand, 19649289 - 19649338
Alignment:
Q  292 aatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 341  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  19649289 aatccgtgatctttcagtcacatgacaacaactttatcagttgcgccaag 19649338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 8417481 - 8417442
Alignment:
Q  296 cgtgacctttcagtcacatgacaacaactttaccagttgc 335  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  8417481 cgtgacatttcagtcacatgacaacaactttaccagttgc 8417442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 340
Target Start/End: Complemental strand, 14553530 - 14553477
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaa 340  Q
    |||||||| | ||||||||| ||||||||||||||||||||||||||||| ||||    
T  14553530 gacttgaacctgtgaccttt-agtcacatgacaacaactttaccagttgcaccaa 14553477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 269 - 342
Target Start/End: Complemental strand, 12889462 - 12889390
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    ||||||||||||   |||||||||| | ||||||||||| |||| |||||||||||||||| |||| |||||||    
T  12889462 caagaggctgttttcaagacttgaacctgtgacctttcactcacgtgacaacaactttacc-gttgtgccaagg 12889390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 348
Target Start/End: Complemental strand, 22967179 - 22967128
Alignment:
Q  297 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||| |||||||||||||| ||||||| ||| ||||| ||||||||||    
T  22967179 gtgaccttacagtcacatgacaataactttatcagatgcgcgaaggttaccc 22967128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 348
Target Start/End: Original strand, 23821214 - 23821265
Alignment:
Q  297 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||| |||||||||||||| ||||||| ||| ||||| ||||||||||    
T  23821214 gtgaccttacagtcacatgacaataactttatcagatgcgcgaaggttaccc 23821265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 347
Target Start/End: Original strand, 23930252 - 23930303
Alignment:
Q  296 cgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacc 347  Q
    |||||||||| || |||||||||||| |||||  ||||||||||||||||||    
T  23930252 cgtgacctttgagacacatgacaacatctttatgagttgcgccaaggttacc 23930303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 299 - 329
Target Start/End: Original strand, 2755553 - 2755583
Alignment:
Q  299 gacctttcagtcacatgacaacaactttacc 329  Q
    |||||||||||||||||||||||||||||||    
T  2755553 gacctttcagtcacatgacaacaactttacc 2755583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 341
Target Start/End: Complemental strand, 24097590 - 24097545
Alignment:
Q  296 cgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 341  Q
    |||||||||||||| |||||||| ||| ||||||||||| ||||||    
T  24097590 cgtgacctttcagtaacatgacatcaattttaccagttgtgccaag 24097545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 30615 - 30536
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||| | | |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30615 caagaggctgtttccaggacttgaaccggtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 30536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 268 - 348
Target Start/End: Original strand, 13121 - 13201
Alignment:
Q  268 gcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    ||||||||||||| | | |||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13121 gcaagaggctgtttccaggacttgaaccggtgacctttcagtcacatgacaacaactttaccggttgcgccaaggttaccc 13201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 348
Target Start/End: Original strand, 17507 - 17547
Alignment:
Q  308 gtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||||||||||||| ||||||||  ||||||||||    
T  17507 gtcacatgacaacaactttagcagttgcgttaaggttaccc 17547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 83896 - 83832
Alignment:
Q  284 aagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  83896 aagacttgaacccgtgacctttcagtcacatgacaacaactttactagttgcgccaaggttaccc 83832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 55; Significance: 2e-22; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 348
Target Start/End: Original strand, 24883 - 24945
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24883 gacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 24945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 342
Target Start/End: Complemental strand, 46849 - 46794
Alignment:
Q  287 acttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    ||||||| ||||||||||  |||||||||||||||||||||||| |||||||||||    
T  46849 acttgaacccgtgaccttctagtcacatgacaacaactttaccaattgcgccaagg 46794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 342
Target Start/End: Original strand, 46999 - 47054
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    ||||||||  ||||||||||||||||| ||||||||||||||| | |||||||||||    
T  46999 gacttgaactcgtgacctttcagtcacctgacaacaactttacta-ttgcgccaagg 47054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 269 - 346
Target Start/End: Complemental strand, 59013 - 58936
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttac 346  Q
    |||||||||||| | | |||||||| ||||||||||||||||||||||||| || |||||||||||| ||||||||||    
T  59013 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaataagtttaccagttgctccaaggttac 58936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 269 - 344
Target Start/End: Complemental strand, 11167 - 11093
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtt 344  Q
    |||||||||||| | | |||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||    
T  11167 caagaggctgtttccaggacttgaacccgtgacctttcagtcacat-agaacaactttaccagttgcgccaaggtt 11093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 288 - 342
Target Start/End: Complemental strand, 10827 - 10773
Alignment:
Q  288 cttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 342  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||| ||||||    
T  10827 cttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaagg 10773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 343
Target Start/End: Original strand, 1701 - 1758
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggt 343  Q
    |||||||| || ||||||||||||||||||||||||||||||||| ||||| ||||||    
T  1701 gacttgaacccatgacctttcagtcacatgacaacaactttaccaattgcgtcaaggt 1758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 269 - 346
Target Start/End: Complemental strand, 4193 - 4117
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttac 346  Q
    ||||||| |||| | | |||||||| |||||||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  4193 caagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttactagttgcg-caaggttac 4117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 269 - 347
Target Start/End: Complemental strand, 43165 - 43085
Alignment:
Q  269 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttaccagtt--gcgccaaggttacc 347  Q
    |||||||||||| ||| ||| ||||  |||||||||||| ||||||||||| |||||||||||||  ||||||||||||||    
T  43165 caagaggctgtttctaggacctgaactcgtgacctttcaatcacatgacaataactttaccagttgcgcgccaaggttacc 43085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 286 - 348
Target Start/End: Complemental strand, 24683 - 24621
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 348  Q
    |||||||| |||||||||| ||||||| |||||||||||||| || ||| |||||||||||||    
T  24683 gacttgaacccgtgaccttacagtcacttgacaacaactttatcaattgtgccaaggttaccc 24621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 310 - 343
Target Start/End: Original strand, 73001 - 73034
Alignment:
Q  310 cacatgacaacaactttaccagttgcgccaaggt 343  Q
    ||||||||||||||||||||||||||||||||||    
T  73001 cacatgacaacaactttaccagttgcgccaaggt 73034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 345
Target Start/End: Original strand, 35134 - 35194
Alignment:
Q  286 gacttgaatccgtgacctttcagtcacatgacaa-caactttaccagttgcgccaaggtta 345  Q
    |||||||| |||||||||| ||||||||||||||  ||||||||||||||| |||| ||||    
T  35134 gacttgaacccgtgaccttacagtcacatgacaataaactttaccagttgcaccaaagtta 35194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 297 - 331
Target Start/End: Complemental strand, 8899 - 8865
Alignment:
Q  297 gtgacctttcagtcacatgacaacaactttaccag 331  Q
    |||||||| ||||||||||||||||||||||||||    
T  8899 gtgaccttacagtcacatgacaacaactttaccag 8865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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