View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0029-Insertion-7 (Length: 367)
Name: NF0029-Insertion-7
Description: NF0029
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0029-Insertion-7 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 356; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 8 - 367
Target Start/End: Complemental strand, 52577193 - 52576834
Alignment:
| Q |
8 |
acaagttctgcctcacgtttacaatttgtgtattacaatgagtgttacagattgttgagaagaatggacgaataaagtacgtggttaatatcttgcttgg |
107 |
Q |
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| T |
52577193 |
acaagttctgcctcacgtttacaatttgtgtattacaatgagtgttacagattgtcgagaagaatggacgaataaagtacgtggttaatatcttgcttgg |
52577094 |
T |
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| Q |
108 |
gctgaagttctccatgtctggaatttttgtgtaagtttccattgtttaaagttcgctaatgttcaggggagggtccttacaaacacaataaatatgaagg |
207 |
Q |
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| T |
52577093 |
gctgaagttctccatgtctggaatttttgtgtaagtttccattgtttaaagttcgctaatgttcaggggagggtccttacaaacacaataaatatgaagg |
52576994 |
T |
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| Q |
208 |
aatgtagaaaatgaagataggaatctggaagtaataactagaacctgggttagtatgttaggaaaaacttcatatattatatgaatgctttatggttatt |
307 |
Q |
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| T |
52576993 |
aatgtagaaaatgaagataggaatctggaagtaataactagaacctgggttagtatgttaggaaaaacttcatatattatatgaatgctttatggttatt |
52576894 |
T |
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| Q |
308 |
gacgcctttcagcaaggggtcagcgattttagttttagacattaacagagatgaactgaa |
367 |
Q |
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| T |
52576893 |
gacgcctttcagcaaggggtcagcgattttagttttagacattaacagagatgaactgaa |
52576834 |
T |
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