View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend Query Query hiting target
Query hiting target's complemental strand Query's complemental strand hiting target
Query's complemental strand hiting target's complemental strand
Alignment Overview
Query: NF0029-Insertion-8 (Length: 211)
Name: NF0029-Insertion-8
Description: NF0029
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[» ] NF0029-Insertion-8
Alignment Details
Target: chr2 (Bit Score: 161; Significance: 5e-86; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 6 - 181
Target Start/End: Original strand, 41636999 - 41637172
Alignment:
Q
6
caaaactaactcatcttacaacactttcttcaacaacaagcaattccacactctctttcactcttcaacatcaactttccattccttctcttttccactt
105
Q
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
T
41636999
caaaactaactcatcttacaacactttcttcaacaacaagcaattccacactct--ttcactcttcaacatcaactctccattccttctcttttccactt
41637096
T
Q
106
ctaaccgttcacttgttccttcctttctctttaaccaaatatctcttaatattgacgcaaaaccaaataacctttc
181
Q
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
T
41637097
ctaaccgttcacttgttccttcctttctctttaaccaaatatctcttaatattgacgcaaaaccaaataacctttc
41637172
T
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