View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0029-Insertion-8 (Length: 211)
Name: NF0029-Insertion-8
Description: NF0029
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0029-Insertion-8 |
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Alignment Details
Target: chr2 (Bit Score: 161; Significance: 5e-86; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 6 - 181
Target Start/End: Original strand, 41636999 - 41637172
Alignment:
| Q |
6 |
caaaactaactcatcttacaacactttcttcaacaacaagcaattccacactctctttcactcttcaacatcaactttccattccttctcttttccactt |
105 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
41636999 |
caaaactaactcatcttacaacactttcttcaacaacaagcaattccacactct--ttcactcttcaacatcaactctccattccttctcttttccactt |
41637096 |
T |
|
| Q |
106 |
ctaaccgttcacttgttccttcctttctctttaaccaaatatctcttaatattgacgcaaaaccaaataacctttc |
181 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41637097 |
ctaaccgttcacttgttccttcctttctctttaaccaaatatctcttaatattgacgcaaaaccaaataacctttc |
41637172 |
T |
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