View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0029_low_5 (Length: 337)

Name: NF0029_low_5
Description: NF0029
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0029_low_5
NF0029_low_5
[»] chr6 (47 HSPs)
chr6 (15-170)||(19478097-19478252)
chr6 (19-170)||(13605087-13605239)
chr6 (15-170)||(31476006-31476161)
chr6 (16-124)||(34142075-34142183)
chr6 (16-124)||(34154691-34154799)
chr6 (16-129)||(34375909-34376022)
chr6 (26-142)||(3901889-3902006)
chr6 (16-129)||(21396689-21396802)
chr6 (16-129)||(22698235-22698348)
chr6 (16-129)||(24192472-24192585)
chr6 (16-129)||(29491229-29491342)
chr6 (15-170)||(31495832-31495987)
chr6 (15-170)||(31501218-31501373)
chr6 (16-130)||(31981549-31981663)
chr6 (16-129)||(22703358-22703471)
chr6 (16-129)||(24191375-24191488)
chr6 (22-130)||(12182998-12183107)
chr6 (18-129)||(10642699-10642811)
chr6 (15-170)||(31515722-31515877)
chr6 (24-121)||(24589164-24589262)
chr6 (30-129)||(21401745-21401844)
chr6 (24-122)||(6407860-6407959)
chr6 (24-122)||(11570749-11570848)
chr6 (15-157)||(29325496-29325640)
chr6 (24-122)||(2700106-2700205)
chr6 (16-115)||(2818139-2818238)
chr6 (23-129)||(5600971-5601078)
chr6 (24-98)||(17964559-17964634)
chr6 (24-122)||(33687603-33687702)
chr6 (19-135)||(17281558-17281675)
chr6 (24-122)||(12688967-12689066)
chr6 (18-129)||(11956695-11956807)
chr6 (24-122)||(8747778-8747877)
chr6 (24-122)||(11614092-11614191)
chr6 (24-122)||(21309027-21309126)
chr6 (24-120)||(12406353-12406450)
chr6 (76-120)||(11428041-11428085)
chr6 (24-98)||(16836156-16836231)
chr6 (24-122)||(20748284-20748383)
chr6 (24-122)||(29892261-29892360)
chr6 (76-122)||(19674309-19674355)
chr6 (81-122)||(11534736-11534777)
chr6 (81-122)||(11560246-11560287)
chr6 (26-129)||(5740792-5740896)
chr6 (18-107)||(35129640-35129729)
chr6 (86-130)||(6728397-6728441)
chr6 (24-111)||(14508991-14509079)
[»] scaffold0132 (2 HSPs)
scaffold0132 (17-172)||(2765-2920)
scaffold0132 (17-172)||(10725-10880)
[»] chr2 (44 HSPs)
chr2 (19-170)||(42914591-42914742)
chr2 (21-170)||(5089226-5089376)
chr2 (16-129)||(42723443-42723556)
chr2 (16-129)||(42728612-42728725)
chr2 (16-129)||(44096292-44096405)
chr2 (16-129)||(44754588-44754701)
chr2 (16-129)||(44759754-44759867)
chr2 (16-129)||(40518464-40518577)
chr2 (24-122)||(9180724-9180823)
chr2 (24-121)||(30658260-30658358)
chr2 (19-129)||(40392309-40392419)
chr2 (16-129)||(28751721-28751834)
chr2 (24-122)||(9189803-9189902)
chr2 (24-122)||(10160724-10160823)
chr2 (24-122)||(1934993-1935092)
chr2 (24-120)||(18344429-18344526)
chr2 (26-122)||(29677377-29677474)
chr2 (24-122)||(19892466-19892565)
chr2 (24-122)||(30650925-30651024)
chr2 (28-122)||(42926763-42926860)
chr2 (24-122)||(12796921-12797020)
chr2 (24-122)||(25478297-25478396)
chr2 (24-122)||(25497325-25497424)
chr2 (24-122)||(31326735-31326834)
chr2 (24-122)||(35601918-35602017)
chr2 (24-122)||(7737851-7737950)
chr2 (47-124)||(19538380-19538458)
chr2 (24-121)||(35638997-35639095)
chr2 (24-122)||(19578414-19578513)
chr2 (47-124)||(28854999-28855077)
chr2 (42-122)||(28603294-28603375)
chr2 (24-120)||(40847595-40847692)
chr2 (18-129)||(11658882-11658994)
chr2 (75-120)||(39542900-39542945)
chr2 (46-124)||(6297907-6297986)
chr2 (40-122)||(21523736-21523818)
chr2 (24-129)||(29907368-29907470)
chr2 (24-122)||(30631575-30631674)
chr2 (26-122)||(19094497-19094594)
chr2 (26-122)||(29677763-29677860)
chr2 (23-122)||(160037-160137)
chr2 (22-96)||(28945191-28945266)
chr2 (48-129)||(44683140-44683222)
chr2 (24-122)||(17545298-17545398)
[»] chr3 (61 HSPs)
chr3 (15-165)||(33089334-33089484)
chr3 (15-169)||(20810321-20810476)
chr3 (15-142)||(38436982-38437109)
chr3 (15-142)||(53119504-53119631)
chr3 (15-144)||(13022001-13022131)
chr3 (15-157)||(26962021-26962163)
chr3 (16-130)||(3476938-3477052)
chr3 (16-129)||(17368709-17368822)
chr3 (16-129)||(20090654-20090767)
chr3 (16-129)||(20095779-20095892)
chr3 (16-129)||(34129161-34129274)
chr3 (24-122)||(8069674-8069772)
chr3 (16-130)||(55128780-55128893)
chr3 (16-129)||(15763022-15763135)
chr3 (16-119)||(15768183-15768286)
chr3 (16-130)||(3482415-3482529)
chr3 (23-129)||(54270634-54270740)
chr3 (16-129)||(17364053-17364168)
chr3 (24-122)||(758368-758467)
chr3 (16-119)||(4117592-4117695)
chr3 (24-122)||(23666123-23666222)
chr3 (24-122)||(24038371-24038470)
chr3 (24-122)||(39775728-39775827)
chr3 (24-122)||(49971424-49971523)
chr3 (16-129)||(30341836-30341949)
chr3 (24-122)||(3672580-3672679)
chr3 (24-122)||(3692612-3692711)
chr3 (24-122)||(14438695-14438794)
chr3 (24-122)||(18467219-18467318)
chr3 (24-122)||(20520048-20520147)
chr3 (24-122)||(55431309-55431408)
chr3 (16-119)||(17357836-17357941)
chr3 (24-122)||(7571218-7571317)
chr3 (24-122)||(12112641-12112740)
chr3 (23-123)||(2617255-2617356)
chr3 (24-122)||(3033638-3033737)
chr3 (24-122)||(3418989-3419088)
chr3 (24-118)||(8883168-8883263)
chr3 (24-122)||(8887924-8888023)
chr3 (22-120)||(21494300-21494399)
chr3 (22-122)||(27605133-27605234)
chr3 (24-122)||(29715638-29715737)
chr3 (16-117)||(10321444-10321546)
chr3 (24-120)||(32474680-32474775)
chr3 (24-120)||(12965873-12965970)
chr3 (24-122)||(18472002-18472100)
chr3 (24-122)||(29350234-29350333)
chr3 (24-121)||(3657240-3657338)
chr3 (26-99)||(26706803-26706877)
chr3 (18-124)||(10586177-10586283)
chr3 (26-101)||(16013724-16013801)
chr3 (76-122)||(27708872-27708918)
chr3 (75-120)||(25726845-25726890)
chr3 (18-65)||(795399-795446)
chr3 (24-122)||(12971633-12971732)
chr3 (48-117)||(1688910-1688980)
chr3 (24-93)||(27708959-27709029)
chr3 (75-120)||(2207759-2207804)
chr3 (24-68)||(23661464-23661508)
chr3 (46-124)||(31002692-31002770)
chr3 (41-129)||(1689977-1690065)
[»] chr1 (52 HSPs)
chr1 (15-172)||(14582047-14582203)
chr1 (15-179)||(39747156-39747321)
chr1 (15-170)||(5602416-5602571)
chr1 (15-144)||(38734250-38734379)
chr1 (18-139)||(26651160-26651281)
chr1 (15-124)||(10106098-10106207)
chr1 (15-144)||(13890787-13890917)
chr1 (15-170)||(19422865-19423025)
chr1 (16-129)||(11251105-11251218)
chr1 (16-129)||(37404408-37404521)
chr1 (16-129)||(36684707-36684820)
chr1 (16-129)||(37409529-37409642)
chr1 (16-129)||(3584591-3584704)
chr1 (16-129)||(5724969-5725082)
chr1 (16-129)||(27716433-27716546)
chr1 (24-122)||(19799013-19799112)
chr1 (19-129)||(34318219-34318329)
chr1 (16-129)||(5730095-5730208)
chr1 (16-97)||(48246675-48246756)
chr1 (35-129)||(11387841-11387935)
chr1 (24-121)||(51041463-51041559)
chr1 (24-122)||(10135452-10135551)
chr1 (24-122)||(10140085-10140184)
chr1 (24-122)||(16035604-16035703)
chr1 (24-122)||(23192817-23192916)
chr1 (24-122)||(40165976-40166075)
chr1 (24-122)||(47455386-47455485)
chr1 (24-121)||(16649613-16649710)
chr1 (27-122)||(39588370-39588466)
chr1 (24-120)||(33301180-33301277)
chr1 (24-122)||(18784549-18784647)
chr1 (24-122)||(47451225-47451324)
chr1 (35-104)||(27711319-27711388)
chr1 (24-122)||(12259992-12260091)
chr1 (76-122)||(25855167-25855213)
chr1 (46-122)||(3094110-3094187)
chr1 (48-127)||(8267853-8267934)
chr1 (40-122)||(26927738-26927821)
chr1 (18-124)||(41097946-41098052)
chr1 (24-129)||(25188272-25188378)
chr1 (18-107)||(27761833-27761922)
chr1 (18-107)||(33380915-33381004)
chr1 (56-122)||(4632958-4633025)
chr1 (21-107)||(12906166-12906251)
chr1 (24-122)||(38620689-38620787)
chr1 (18-107)||(31063968-31064056)
chr1 (24-107)||(2493818-2493901)
chr1 (76-120)||(16832099-16832143)
chr1 (81-136)||(27461759-27461814)
chr1 (18-107)||(36724720-36724809)
chr1 (26-122)||(11806355-11806452)
chr1 (18-122)||(33055035-33055139)
[»] scaffold0011 (2 HSPs)
scaffold0011 (15-164)||(7001-7150)
scaffold0011 (15-158)||(1526-1669)
[»] chr4 (70 HSPs)
chr4 (15-172)||(10120800-10120958)
chr4 (15-124)||(653038-653147)
chr4 (15-157)||(8083018-8083162)
chr4 (171-276)||(52765934-52766039)
chr4 (16-129)||(8980277-8980390)
chr4 (16-129)||(8985397-8985510)
chr4 (16-129)||(13700500-13700613)
chr4 (16-129)||(21299825-21299938)
chr4 (16-129)||(36354166-36354279)
chr4 (16-129)||(54991476-54991589)
chr4 (16-129)||(21304945-21305058)
chr4 (16-129)||(36359284-36359397)
chr4 (16-129)||(39999059-39999172)
chr4 (16-129)||(40004017-40004130)
chr4 (16-129)||(41393235-41393348)
chr4 (16-129)||(51019365-51019478)
chr4 (16-129)||(53797619-53797732)
chr4 (16-129)||(54343193-54343306)
chr4 (16-129)||(54348347-54348460)
chr4 (16-130)||(47046299-47046413)
chr4 (16-129)||(13695149-13695262)
chr4 (16-129)||(13710659-13710771)
chr4 (24-122)||(37259877-37259976)
chr4 (16-118)||(9764013-9764115)
chr4 (19-124)||(24490026-24490132)
chr4 (24-122)||(5271419-5271518)
chr4 (24-122)||(13521992-13522091)
chr4 (24-122)||(31269030-31269129)
chr4 (24-122)||(31273517-31273616)
chr4 (24-122)||(33463356-33463455)
chr4 (24-122)||(37264564-37264663)
chr4 (22-129)||(34644547-34644655)
chr4 (24-122)||(31765882-31765981)
chr4 (24-117)||(31729387-31729481)
chr4 (24-122)||(5928219-5928318)
chr4 (24-122)||(8693707-8693806)
chr4 (24-122)||(16421025-16421124)
chr4 (24-122)||(55251716-55251814)
chr4 (24-122)||(8030476-8030575)
chr4 (24-130)||(10318779-10318886)
chr4 (24-122)||(12823895-12823994)
chr4 (24-122)||(12878235-12878334)
chr4 (24-122)||(47244244-47244343)
chr4 (24-122)||(51697913-51698012)
chr4 (25-122)||(42758756-42758854)
chr4 (46-129)||(39319621-39319705)
chr4 (24-122)||(33468973-33469072)
chr4 (24-120)||(2819842-2819939)
chr4 (24-122)||(12874535-12874634)
chr4 (24-122)||(19101973-19102072)
chr4 (24-122)||(19906247-19906346)
chr4 (24-122)||(32082091-32082189)
chr4 (24-122)||(47574621-47574720)
chr4 (24-122)||(48276649-48276743)
chr4 (22-107)||(30564412-30564498)
chr4 (42-122)||(13065786-13065867)
chr4 (24-107)||(16595934-16596017)
chr4 (73-124)||(7715134-7715185)
chr4 (52-122)||(51696998-51697069)
chr4 (76-122)||(13059406-13059452)
chr4 (18-107)||(33722914-33723003)
chr4 (24-96)||(16953107-16953180)
chr4 (70-122)||(1151345-1151397)
chr4 (18-129)||(17359526-17359633)
chr4 (24-107)||(20513118-20513201)
chr4 (24-122)||(19106615-19106714)
chr4 (47-108)||(31298407-31298469)
chr4 (84-129)||(31099267-31099312)
chr4 (89-122)||(32221163-32221196)
chr4 (85-122)||(52691117-52691154)
[»] chr8 (46 HSPs)
chr8 (15-144)||(33616718-33616847)
chr8 (15-142)||(19429991-19430118)
chr8 (15-142)||(19435493-19435620)
chr8 (15-142)||(19566140-19566267)
chr8 (15-142)||(19571642-19571769)
chr8 (15-144)||(31030503-31030632)
chr8 (16-129)||(32015690-32015803)
chr8 (18-129)||(42514368-42514479)
chr8 (16-129)||(17955781-17955894)
chr8 (16-129)||(21644073-21644186)
chr8 (16-123)||(43999222-43999329)
chr8 (23-142)||(13584328-13584454)
chr8 (16-129)||(24884702-24884816)
chr8 (24-122)||(31449866-31449965)
chr8 (24-122)||(38182237-38182336)
chr8 (24-122)||(44925923-44926022)
chr8 (24-122)||(1910969-1911068)
chr8 (24-122)||(19166630-19166729)
chr8 (24-122)||(40125885-40125984)
chr8 (24-119)||(43302718-43302815)
chr8 (24-120)||(15875668-15875765)
chr8 (24-122)||(17025931-17026030)
chr8 (24-122)||(17556423-17556522)
chr8 (24-122)||(18876367-18876465)
chr8 (24-122)||(24090623-24090722)
chr8 (24-122)||(33416543-33416642)
chr8 (26-122)||(1807468-1807565)
chr8 (26-122)||(28559656-28559753)
chr8 (24-122)||(34118462-34118561)
chr8 (24-122)||(36683575-36683674)
chr8 (76-122)||(40130739-40130785)
chr8 (24-122)||(17953873-17953972)
chr8 (24-122)||(23548632-23548731)
chr8 (46-122)||(4238337-4238414)
chr8 (46-122)||(4243076-4243153)
chr8 (24-119)||(2965629-2965725)
chr8 (24-99)||(29220283-29220359)
chr8 (18-107)||(4544245-4544334)
chr8 (24-97)||(34517263-34517335)
chr8 (24-107)||(2469986-2470069)
chr8 (86-120)||(15951584-15951618)
chr8 (29-122)||(28564826-28564920)
chr8 (29-122)||(28572449-28572543)
chr8 (75-129)||(32010528-32010582)
chr8 (46-123)||(37771707-37771785)
chr8 (24-123)||(42157872-42157971)
[»] chr7 (48 HSPs)
chr7 (15-142)||(24528331-24528458)
chr7 (15-152)||(9973429-9973566)
chr7 (15-142)||(28292495-28292620)
chr7 (15-140)||(33226393-33226518)
chr7 (16-129)||(16539404-16539517)
chr7 (16-129)||(16626145-16626258)
chr7 (16-129)||(42571935-42572048)
chr7 (16-129)||(33237992-33238105)
chr7 (16-129)||(47998965-47999078)
chr7 (16-130)||(47177111-47177225)
chr7 (16-129)||(2234622-2234735)
chr7 (16-129)||(32212646-32212759)
chr7 (16-129)||(33243169-33243282)
chr7 (16-129)||(47993790-47993903)
chr7 (16-119)||(12934397-12934500)
chr7 (16-119)||(17495403-17495506)
chr7 (16-119)||(17557708-17557811)
chr7 (16-130)||(43892847-43892961)
chr7 (16-108)||(19309603-19309695)
chr7 (24-122)||(4579504-4579603)
chr7 (16-129)||(21081031-21081146)
chr7 (24-122)||(9650967-9651066)
chr7 (24-122)||(26341195-26341294)
chr7 (24-121)||(23866065-23866163)
chr7 (52-129)||(22857715-22857792)
chr7 (24-120)||(23246933-23247030)
chr7 (24-122)||(44423137-44423236)
chr7 (26-122)||(3357634-3357731)
chr7 (24-123)||(8076045-8076145)
chr7 (24-122)||(4930229-4930328)
chr7 (24-122)||(13314236-13314335)
chr7 (24-122)||(44510677-44510776)
chr7 (24-122)||(10388367-10388464)
chr7 (24-120)||(8268291-8268388)
chr7 (24-122)||(12254075-12254174)
chr7 (24-122)||(27238238-27238337)
chr7 (41-122)||(42627214-42627296)
chr7 (26-120)||(3879995-3880091)
chr7 (24-122)||(25543362-25543461)
chr7 (18-124)||(27256237-27256343)
chr7 (26-122)||(29150930-29151027)
chr7 (75-122)||(16372394-16372441)
chr7 (70-116)||(15642236-15642282)
chr7 (22-122)||(19640295-19640395)
chr7 (40-121)||(47760983-47761069)
chr7 (24-94)||(6590983-6591054)
chr7 (24-122)||(9008159-9008258)
chr7 (24-95)||(13142901-13142973)
[»] chr5 (52 HSPs)
chr5 (15-127)||(7805063-7805175)
chr5 (15-124)||(14374130-14374239)
chr5 (15-124)||(24435860-24435969)
chr5 (15-124)||(13582681-13582790)
chr5 (16-129)||(17510048-17510161)
chr5 (16-119)||(41858593-41858696)
chr5 (16-129)||(24771349-24771462)
chr5 (16-129)||(36253816-36253929)
chr5 (16-129)||(42019563-42019676)
chr5 (16-129)||(17504943-17505056)
chr5 (24-119)||(1414051-1414146)
chr5 (24-122)||(7451754-7451853)
chr5 (24-122)||(26667268-26667367)
chr5 (24-122)||(26938865-26938964)
chr5 (24-122)||(29167973-29168072)
chr5 (16-119)||(24776804-24776910)
chr5 (24-122)||(556691-556790)
chr5 (24-122)||(561463-561562)
chr5 (24-122)||(12103021-12103120)
chr5 (24-122)||(36937511-36937610)
chr5 (24-122)||(36942265-36942364)
chr5 (24-122)||(37248795-37248894)
chr5 (24-122)||(37652830-37652929)
chr5 (16-119)||(41853548-41853651)
chr5 (16-129)||(26709092-26709207)
chr5 (16-129)||(26978826-26978941)
chr5 (24-122)||(6155419-6155518)
chr5 (24-122)||(39518406-39518505)
chr5 (24-122)||(39523045-39523144)
chr5 (24-122)||(42001430-42001529)
chr5 (24-121)||(32461549-32461647)
chr5 (24-108)||(35679875-35679960)
chr5 (26-122)||(40147891-40147988)
chr5 (24-122)||(6514601-6514700)
chr5 (24-122)||(10759820-10759918)
chr5 (24-122)||(12045139-12045238)
chr5 (24-122)||(12501899-12501998)
chr5 (24-122)||(36423633-36423732)
chr5 (24-122)||(36428705-36428804)
chr5 (24-122)||(41996661-41996760)
chr5 (24-120)||(41587160-41587257)
chr5 (24-122)||(3665928-3666027)
chr5 (24-122)||(12102831-12102930)
chr5 (24-129)||(28857851-28857958)
chr5 (24-129)||(31986716-31986822)
chr5 (24-119)||(12041932-12042028)
chr5 (24-122)||(20181063-20181162)
chr5 (18-124)||(21323960-21324066)
chr5 (18-124)||(31731538-31731644)
chr5 (20-122)||(13301482-13301584)
chr5 (23-129)||(9076979-9077085)
chr5 (24-68)||(37550032-37550076)
[»] scaffold0166 (2 HSPs)
scaffold0166 (16-130)||(13732-13846)
scaffold0166 (16-119)||(19187-19293)
[»] scaffold0014 (2 HSPs)
scaffold0014 (16-129)||(31535-31648)
scaffold0014 (19-129)||(26363-26473)
[»] scaffold0594 (1 HSPs)
scaffold0594 (16-129)||(9200-9313)
[»] scaffold0517 (1 HSPs)
scaffold0517 (16-129)||(3553-3666)
[»] scaffold0055 (1 HSPs)
scaffold0055 (16-129)||(3048-3161)
[»] scaffold0052 (1 HSPs)
scaffold0052 (16-129)||(81374-81487)
[»] scaffold0060 (2 HSPs)
scaffold0060 (16-119)||(37010-37113)
scaffold0060 (46-124)||(47878-47957)
[»] scaffold0352 (1 HSPs)
scaffold0352 (24-122)||(7100-7199)
[»] scaffold0182 (1 HSPs)
scaffold0182 (24-122)||(9887-9986)
[»] scaffold0002 (2 HSPs)
scaffold0002 (24-122)||(4070-4169)
scaffold0002 (24-91)||(443945-444011)
[»] scaffold0067 (1 HSPs)
scaffold0067 (15-130)||(33959-34075)
[»] scaffold0045 (1 HSPs)
scaffold0045 (24-122)||(83062-83161)
[»] scaffold0012 (1 HSPs)
scaffold0012 (24-122)||(166086-166185)
[»] scaffold0057 (1 HSPs)
scaffold0057 (24-103)||(35649-35729)
[»] scaffold2020 (1 HSPs)
scaffold2020 (24-122)||(367-466)
[»] scaffold0009 (1 HSPs)
scaffold0009 (24-122)||(165029-165128)
[»] scaffold0008 (1 HSPs)
scaffold0008 (24-114)||(255821-255912)
[»] scaffold0020 (1 HSPs)
scaffold0020 (46-123)||(1247-1325)
[»] scaffold0018 (1 HSPs)
scaffold0018 (19-107)||(171711-171798)


Alignment Details
Target: chr6 (Bit Score: 128; Significance: 4e-66; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 15 - 170
Target Start/End: Complemental strand, 19478252 - 19478097
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  19478252 gatctgggctgttttatcgtggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtg 19478153  T
Q  115 actcaacccgataattcctttggcagtatttctgatttctaaattcaaaactaaca 170  Q
    |||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||    
T  19478152 actcaacccggtaattcctttgacagtatttctaatttctaaattcaaaactaaca 19478097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 19 - 170
Target Start/End: Original strand, 13605087 - 13605239
Alignment:
Q  19 tgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||  |||||||||    
T  13605087 tgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcaacctagtcgtgactc 13605186  T
Q  119 aacccgataattcctttggcagtatttctga-tttctaaattcaaaactaaca 170  Q
    |||||| ||||||||||| ||||| |||||| ||| |||||||||||||||||    
T  13605187 aacccggtaattcctttgacagtacttctgattttttaaattcaaaactaaca 13605239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 15 - 170
Target Start/End: Original strand, 31476006 - 31476161
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    |||||| ||||||||||||||||||||||||||||||||||  |||||||| |||||  |||||||| | |||| |||||||| |||| |||||||||||    
T  31476006 gatctgagctgttttatcctggagacggcgtggttgttagttgaccttgcataacttaaatagtgccgccaaacatcttaaagtgagcaacctgatcgtg 31476105  T
Q  115 actcaacccgataattcctttggcagtatttctgatttctaaattcaaaactaaca 170  Q
    ||||||||||||||||||||| |||||  ||||||||| ||||  ||||| |||||    
T  31476106 actcaacccgataattcctttagcagtggttctgatttttaaacacaaaaataaca 31476161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 34142183 - 34142075
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| ||||||    
T  34142183 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttgggtagagccacgaaacgtcttaaagaaagcgacctggtcgtga 34142084  T
Q  116 ctcaacccg 124  Q
    |||| ||||    
T  34142083 ctcaccccg 34142075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 34154799 - 34154691
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| ||||||    
T  34154799 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttgggtagagccacgaaacgtcttaaagaaagcgacctggtcgtga 34154700  T
Q  116 ctcaacccg 124  Q
    |||| ||||    
T  34154699 ctcaccccg 34154691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 34376022 - 34375909
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| || ||||| ||||||||||| | ||||||| |||||||||||||||| ||||||||||||||||    
T  34376022 atctgggctgttttatcctggagacggcgcggttgctaatctacgttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctgatcgtga 34375923  T
Q  116 ctcaacccgataat 129  Q
    |||| |||||||||    
T  34375922 ctcaccccgataat 34375909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 3902006 - 3901889
Alignment:
Q  26 ttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacccg 124  Q
    ||||||||||||| ||||| ||||| || |||||||||||||| ||||||||||||| | |||||||||||||||||||||||| |||||||||||||||    
T  3902006 ttttatcctggaggcggcgcggttggtattctaccttgcacaaacttggatagtgccgcaaaacgtcttaaagagagcgacctggtcgtgactcaacccg 3901907  T
Q  125 ataattcctttggcagta 142  Q
     |||||||||||| ||||    
T  3901906 gtaattcctttggtagta 3901889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 21396802 - 21396689
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    |||||||||||||||||||||||| |||| ||||| |||||||||||||||||||| | ||||||| |||||||||||||||| ||||||||| ||||||    
T  21396802 atctgggctgttttatcctggagatggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 21396703  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  21396702 ctcaccccggtaat 21396689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 22698235 - 22698348
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  | ||||||| |||||||||||||||||||||||||| ||||||    
T  22698235 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 22698334  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  22698335 ctcatcccggtaat 22698348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 24192472 - 24192585
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||  | ||||||| |||||||||||||||| ||||||||| ||||||    
T  24192472 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaactcaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 24192571  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  24192572 ctcaccccggtaat 24192585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 29491229 - 29491342
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||| |||||||||||||||| |||||| || ||||||    
T  29491229 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacttggtcgtga 29491328  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  29491329 ctcaccccggtaat 29491342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 15 - 170
Target Start/End: Original strand, 31495832 - 31495987
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||| || ||   ||||||| | |||| | |||||| |||| |||||||||||    
T  31495832 gatctgggctgttttatcctggagacggcgtggttgttagtttactttgcataatttaagtagtgccgccaaacatgttaaagtgagcaacctgatcgtg 31495931  T
Q  115 actcaacccgataattcctttggcagtatttctgatttctaaattcaaaactaaca 170  Q
    ||||||||||||||||||||| | |||  ||||||||| ||||  ||||| |||||    
T  31495932 actcaacccgataattcctttagtagtggttctgatttttaaacacaaaaataaca 31495987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 15 - 170
Target Start/End: Original strand, 31501218 - 31501373
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||| || ||   ||||||| | |||| | |||||| |||| |||||||||||    
T  31501218 gatctgggctgttttatcctggagacggcgtggttgttagtttactttgcataatttaagtagtgccgccaaacatgttaaagtgagcaacctgatcgtg 31501317  T
Q  115 actcaacccgataattcctttggcagtatttctgatttctaaattcaaaactaaca 170  Q
    ||||||||||||||||||||| | |||  ||||||||| ||||  ||||| |||||    
T  31501318 actcaacccgataattcctttagtagtggttctgatttttaaacacaaaaataaca 31501373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 31981663 - 31981549
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    |||||| |||||||||||||||||||||| ||||| ||||||||||||||||| || | ||||||| |||||||||||||||| ||||||||| ||||||    
T  31981663 atctggcctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 31981564  T
Q  116 ctcaacccgataatt 130  Q
    |||| |||| |||||    
T  31981563 ctcaccccggtaatt 31981549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 22703358 - 22703471
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||| |||||||||||||||| | |||| | |||||||    
T  22703358 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaaacgacataatcgtga 22703457  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  22703458 ctcaccccggtaat 22703471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 24191375 - 24191488
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||  |||||||||||||||||||  | ||||||| |||||||||||||||| ||||||||| ||||||    
T  24191375 atctgggctgttttatcctggagacggcgcggttactagtctaccttgcacaactcaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 24191474  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  24191475 ctcaccccggtaat 24191488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 22 - 130
Target Start/End: Original strand, 12182998 - 12183107
Alignment:
Q  22 gctgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaa 120  Q
    |||||||||| |||||| || || |||||||||||||| |||||||| ||||| ||||||| |||||||||||||||||||||||||| |||||||||||    
T  12182998 gctgttttattctggaggcgacgcggttgttagtctacattgcacaaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaa 12183097  T
Q  121 cccgataatt 130  Q
    || |||||||    
T  12183098 cctgataatt 12183107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 10642811 - 10642699
Alignment:
Q  18 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgac 116  Q
    ||||| |||||||||| |||| ||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||| |  |||||||    
T  10642811 ctgggatgttttatccgggaggcggcgcggttgttagtctaccttgcacaacctcggatagtgccacgaaacgtcttaaagaaagcgacattgtcgtgac 10642712  T
Q  117 tcaacccgataat 129  Q
    |||||||| ||||    
T  10642711 tcaacccggtaat 10642699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 15 - 170
Target Start/End: Original strand, 31515722 - 31515877
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||| ||||| || ||   ||||||| | |||| | |||||| |||| |||||||||||    
T  31515722 gatctaggctgttttatcctggagacggcgtggttgttagtttactttgcataatttaagtagtgccgccaaacatgttaaagtgagcaacctgatcgtg 31515821  T
Q  115 actcaacccgataattcctttggcagtatttctgatttctaaattcaaaactaaca 170  Q
    |||||||| |||||||||||| | |||  ||||||||| ||||  ||||| |||||    
T  31515822 actcaacctgataattcctttagtagtggttctgatttttaaacacaaaaataaca 31515877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 24589164 - 24589262
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaac 121  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||  ||||| |||| |||||||||| ||||||||||||| ||||||||||||||||    
T  24589164 tgttttatcctggagacggcgtggttgatagtctatcttgcacaattttggaaagtgtcacgaaacgttttaaagagagcgatctgatcgtgactcaac 24589262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 30 - 129
Target Start/End: Complemental strand, 21401844 - 21401745
Alignment:
Q  30 atcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacccgataat 129  Q
    ||||||||||||||| ||||| ||||||||||| |||||||| | ||||||| |||||||||||||||| ||||||||| |||||||||| |||| ||||    
T  21401844 atcctggagacggcgcggttgctagtctaccttccacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcatcccggtaat 21401745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 6407860 - 6407959
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| | ||| |||| || ||  |||||||||||||||||| ||||||||||||||||||||||||||||    
T  6407860 tgttttatcctggaggcggcgtggttgatagtctgctttgtacaattttgggcagtgccacgaaacgtcttcaagagagcgacctgatcgtgactcaacc 6407959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 11570749 - 11570848
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| | |||| |||||||||| || ||  ||||||||||||||||||||||||||||||||| | |||||||||||    
T  11570749 tgttttatcctggaggcggcgtggttgattgtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggttgtgactcaacc 11570848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 157
Target Start/End: Complemental strand, 29325640 - 29325496
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccacgaaacgtcttaaagagagcgacctgatcgt 113  Q
    |||||||||| ||||||| ||||| || |   |||||||||||||||||||||| ||| | ||||| |   |||||||||||| |||||||| |||||||    
T  29325640 gatctgggctattttatcttggaggcgtcacagttgttagtctaccttgcacaaacttaggtagtgtcgtaaaacgtcttaaaaagagcgacttgatcgt 29325541  T
Q  114 gactcaacccgataattcctttggcagta-tttctgatttctaaa 157  Q
    ||||||||||| ||||| |||||| |||| |||||||||| ||||    
T  29325540 gactcaacccggtaattactttggtagtagtttctgatttttaaa 29325496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 2700106 - 2700205
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggat-agtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||  ||||||||||| ||||||  ||||||||| || ||  ||||||||||||||||||||||||||||| ||| |||||||||||||    
T  2700106 tgttttatcctggaagcggcgtggttgatagtctgtcttgcacaattttgaacagtgccacgaaacgtcttaaagagagcgatctggtcgtgactcaacc 2700205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 2818139 - 2818238
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||| ||||||||||||||||||||||| ||||  |||||||||||||||||||| | ||||  | | |||||||||||||| ||||||||| ||||||    
T  2818139 atctgagctgttttatcctggagacggcgcggtttctagtctaccttgcacaacttaggtagtaacgcaaaacgtcttaaagaaagcgacctggtcgtga 2818238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 23 - 129
Target Start/End: Original strand, 5600971 - 5601078
Alignment:
Q  23 ctgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaac 121  Q
    |||||||||| ||||| ||||| |||||||| |||||||| ||||| || || ||||| | |||||||||||||||| ||||||||| ||||||||||||    
T  5600971 ctgttttatcttggaggcggcgcggttgttattctaccttacacaaactcgggtagtgtcgcgaaacgtcttaaagaaagcgacctggtcgtgactcaac 5601070  T
Q  122 ccgataat 129  Q
    | ||||||    
T  5601071 ctgataat 5601078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 24 - 98
Target Start/End: Original strand, 17964559 - 17964634
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccacgaaacgtcttaaaga 98  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||||  |||||||||||||||||||||||||||||    
T  17964559 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggatagtgccacgaaacgtcttaaaga 17964634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 33687603 - 33687702
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    |||||||||||||||||||| |||||| ||||||  ||||||||| || ||  ||||||||||||||||||||||||||||||||| | || ||||||||    
T  33687603 tgttttatcctggagacggcatggttgatagtctgtcttgcacaattttggccagtgccacgaaacgtcttaaagagagcgacctggtggtaactcaacc 33687702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 17281558 - 17281675
Alignment:
Q  19 tgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgact 117  Q
    ||||||||||||||||  || ||  | ||||||||||||||||| ||||| |  || ||||||| |||||||||||||||| |||||| || ||||||||    
T  17281558 tgggctgttttatcctaaaggcgatgcggttgttagtctaccttacacaaatacgggtagtgccgcgaaacgtcttaaagaaagcgacatgctcgtgact 17281657  T
Q  118 caacccgataattccttt 135  Q
    ||||||| ||||||||||    
T  17281658 caacccggtaattccttt 17281675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 12689066 - 12688967
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||  ||||  |||  ||| ||||||||||||||||| |||||| || ||||||||||    
T  12689066 tgttttatcctggagacggcgtggttgatagtctgccttgcacaattttgggcagtatcacaaaacgtcttaaagagagtgacctggtcatgactcaacc 12688967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 11956695 - 11956807
Alignment:
Q  18 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgac 116  Q
    ||||| ||||||| | |||||  || || |||||||||||||||||||||| ||| |  |||  || ||||||||||||||||||||||||| || ||||    
T  11956695 ctgggatgttttaacttggaggtggtgttgttgttagtctaccttgcacaaacttcgtaagtatcatgaaacgtcttaaagagagcgacctggtcatgac 11956794  T
Q  117 tcaacccgataat 129  Q
    |||||||||||||    
T  11956795 tcaacccgataat 11956807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 8747877 - 8747778
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| |||||| |||| ||| ||  ||||||||| || ||  |||| |||| ||||||||||||||||||||||| |||||||||||||    
T  8747877 tgttttatcctggaggcggcgttgttgatagcctgtcttgcacaattttgggcagtgtcacggaacgtcttaaagagagcgacctggtcgtgactcaacc 8747778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 11614092 - 11614191
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgga-tagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||  |||||||  |||||| ||||||||| | |||| ||||||||||||||    
T  11614092 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagcagtgccataaaacgttttaaagagaacaacctcatcgtgactcaacc 11614191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 21309126 - 21309027
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| | ||||||||  ||||  ||||||| |||||||||||||||||||||  || | |||||||||||    
T  21309126 tgttttatcctggaggcggcgtggttgatagtctgcattgcacaattttgggcagtgccatgaaacgtcttaaagagagcgatatggtagtgactcaacc 21309027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 24 - 120
Target Start/End: Original strand, 12406353 - 12406450
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttg-gatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaa 120  Q
    ||||||||| || || ||||||| ||| |||||| |||||||||||||  |  | |||||||||||||||| |||||||||||||| |||||||||||    
T  12406353 tgttttatcatgaaggcggcgtgattgatagtcttccttgcacaactttaggcactgccacgaaacgtctttaagagagcgacctggtcgtgactcaa 12406450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 11428085 - 11428041
Alignment:
Q  76 agtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaa 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  11428085 agtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaa 11428041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 98
Target Start/End: Original strand, 16836156 - 16836231
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccacgaaacgtcttaaaga 98  Q
    ||||||||||||||| ||||||||||| |||||| ||||| ||||  ||||  |||||||||||||||||||||||    
T  16836156 tgttttatcctggaggcggcgtggttgatagtctgccttgtacaattttgggcagtgccacgaaacgtcttaaaga 16836231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 20748284 - 20748383
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    |||||||| |||||| ||||||||||| |||||  ||||||||||  ||||| ||| ||| ||||| | |||||||| |||||||| |||||||||||||    
T  20748284 tgttttattctggaggcggcgtggttgatagtcggccttgcacaattttggacagtaccatgaaacatgttaaagagggcgacctggtcgtgactcaacc 20748383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 29892261 - 29892360
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    |||||||||||||||  || ||||||| |||| |  ||||||||| || ||  |||||||| |||| |||||||||||||||||||| ||||||||||||    
T  29892261 tgttttatcctggaggaggtgtggttgatagtttgtcttgcacaattttgggcagtgccaccaaacttcttaaagagagcgacctgaccgtgactcaacc 29892360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 122
Target Start/End: Complemental strand, 19674355 - 19674309
Alignment:
Q  76 agtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||| |||||||||||||||||| |||||| |||||||||||||    
T  19674355 agtgccatgaaacgtcttaaagagagtgacctggtcgtgactcaacc 19674309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 11534736 - 11534777
Alignment:
Q  81 cacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    |||||||||||||||||||||||||||| || ||||||||||    
T  11534736 cacgaaacgtcttaaagagagcgacctggtcttgactcaacc 11534777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 11560246 - 11560287
Alignment:
Q  81 cacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    |||||||||||||||||||||||||||| || ||||||||||    
T  11560246 cacgaaacgtcttaaagagagcgacctggtcttgactcaacc 11560287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 129
Target Start/End: Original strand, 5740792 - 5740896
Alignment:
Q  26 ttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacccg 124  Q
    ||||||||| | | ||||| ||||| ||||| ||||||||||| ||||  ||||| |  |||||||||||||||||| |||||  || ||||||||||||    
T  5740792 ttttatcctagtggcggcgcggttgatagtccaccttgcacaaacttgagtagtgtcgtgaaacgtcttaaagagagtgacctagtcatgactcaacccg 5740891  T
Q  125 ataat 129  Q
     ||||    
T  5740892 gtaat 5740896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 35129729 - 35129640
Alignment:
Q  18 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacct 107  Q
    |||| |||||||||||||  || | |||||||| |||||| | |||||||| || ||  ||||||| ||||||||||||||||||||||||    
T  35129729 ctggactgttttatcctgatgatgtcgtggttgatagtctgc-ttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacct 35129640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 6728397 - 6728441
Alignment:
Q  86 aacgtcttaaagagagcgacctgatcgtgactcaacccgataatt 130  Q
    ||||||||||||| ||||||||| |||||||||| |||| |||||    
T  6728397 aacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatt 6728441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 111
Target Start/End: Complemental strand, 14509079 - 14508991
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggat-agtgccacgaaacgtcttaaagagagcgacctgatc 111  Q
    ||||||||| ||||  ||||||||||| || |||  ||||||||| || ||  |||| ||||||||||||| ||||||||||| |||||    
T  14509079 tgttttatcttggaagcggcgtggttgataatctgtcttgcacaattttgaacagtgacacgaaacgtcttgaagagagcgacatgatc 14508991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 124; Significance: 9e-64; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 17 - 172
Target Start/End: Original strand, 2765 - 2920
Alignment:
Q  17 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgac 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||| |||||||    
T  2765 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgtcacgaaacgtcttaaagagcgcgacctggtcgtgac 2864  T
Q  117 tcaacccgataattcctttggcagtatttctgatttctaaattcaaaactaacaat 172  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| |||| ||||    
T  2865 tcaacccggtaattccttttgcagtatttctgatttctaaattcaatactatcaat 2920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 17 - 172
Target Start/End: Original strand, 10725 - 10880
Alignment:
Q  17 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgac 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||| |||||||    
T  10725 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgtcacgaaacgtcttaaagagcgcgacctggtcgtgac 10824  T
Q  117 tcaacccgataattcctttggcagtatttctgatttctaaattcaaaactaacaat 172  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| |||| ||||    
T  10825 tcaacccggtaattccttttgcagtatttctgatttctaaattcaatactatcaat 10880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 120; Significance: 2e-61; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 19 - 170
Target Start/End: Complemental strand, 42914742 - 42914591
Alignment:
Q  19 tgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||| ||||||| |||||||||    
T  42914742 tgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagagaacgacctggtcgtgactc 42914643  T
Q  119 aacccgataattcctttggcagtatttctgatttctaaattcaaaactaaca 170  Q
    |||||| ||||||||||||||||| ||||||||| |||||||||||||||||    
T  42914642 aacccgctaattcctttggcagtacttctgatttttaaattcaaaactaaca 42914591  T

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Target: chr2; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 21 - 170
Target Start/End: Complemental strand, 5089376 - 5089226
Alignment:
Q  21 ggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaa 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||    
T  5089376 ggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccgcgaaacgtcttaaagagagcgacctggtcatgactcaa 5089277  T
Q  121 cccgataattcctttggcagtatttctga-tttctaaattcaaaactaaca 170  Q
     ||||||||||||||| || || || ||| ||| ||||||||||| |||||    
T  5089276 tccgataattcctttgacaatacttttgattttttaaattcaaaaataaca 5089226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 42723443 - 42723556
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  | ||||||| |||||||||||||||||||||||||| ||||||    
T  42723443 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 42723542  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  42723543 ctcatcccggtaat 42723556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 42728612 - 42728725
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  | ||||||| |||||||||||||||||||||||||| ||||||    
T  42728612 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 42728711  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  42728712 ctcatcccggtaat 42728725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 44096405 - 44096292
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  | ||||||| |||||||||||||||||||||||||| ||||||    
T  44096405 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 44096306  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  44096305 ctcatcccggtaat 44096292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 44754588 - 44754701
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  | ||||||| |||||||||||||||||||||||||| ||||||    
T  44754588 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 44754687  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  44754688 ctcatcccggtaat 44754701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 44759754 - 44759867
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  | ||||||| |||||||||||||||||||||||||| ||||||    
T  44759754 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 44759853  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  44759854 ctcatcccggtaat 44759867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 40518464 - 40518577
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||| | || | ||||||| |||||||||||||||| ||||||||| ||||||    
T  40518464 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcactatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 40518563  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  40518564 ctcaccccggtaat 40518577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 9180724 - 9180823
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  9180724 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 9180823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 30658358 - 30658260
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgga-tagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaac 121  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || || |||||||||||||||||||||||||||||||||| ||||||||||||    
T  30658358 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagtagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 30658260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 40392419 - 40392309
Alignment:
Q  19 tgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactc 118  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||||| |||||||||||||||| | |   ||| |||||||||    
T  40392419 tgggctgttttatcctggagacggcgtggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaaacagtctggtcgtgactc 40392320  T
Q  119 aacccgataat 129  Q
    | |||||||||    
T  40392319 accccgataat 40392309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 28751721 - 28751834
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||| | ||||| | |||||||||||||||||| | ||||||| |||||||||| ||||| ||||||||| ||||||    
T  28751721 atctgggctgttttatcctggagacggtgcggttgcttgtctaccttgcacaacttaggtagtgccgcgaaacgtctaaaagaaagcgacctggtcgtga 28751820  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  28751821 ctcaccccggtaat 28751834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 9189803 - 9189902
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||| ||||||||||||||||||||||||||| ||||| |||||||||||||    
T  9189803 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggacagtgccacgaaacgtcttaaagagagcaacctggtcgtgactcaacc 9189902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 10160724 - 10160823
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  10160724 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 10160823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 1934993 - 1935092
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| ||||||  ||||||||| || ||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  1934993 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 1935092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 120
Target Start/End: Complemental strand, 18344526 - 18344429
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaa 120  Q
    ||||||||||||||| ||||||||||  |||||| |||||||||| || ||  ||||||||||||||||||||||||||||||||| |||||||||||    
T  18344526 tgttttatcctggagccggcgtggttaatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaa 18344429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 122
Target Start/End: Complemental strand, 29677474 - 29677377
Alignment:
Q  26 ttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||| ||||||||||| |||||| | |||||||| || ||  |||||||||||||||||||||||||||||| ||||||||||||||||    
T  29677474 ttttatcctggaggcggcgtggttgatagtctgctttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacatgatcgtgactcaacc 29677377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 19892466 - 19892565
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| ||||||   |||||||| || ||| ||||||| ||||||||||||||||||||||||| |||||||||||||    
T  19892466 tgttttatcctggaggcggcgtggttgatagtctgtgttgcacaattttggacagtgccaggaaacgtcttaaagagagcgacctggtcgtgactcaacc 19892565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 30651024 - 30650925
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||| ||||| ||||||||||| |||||| |||||||||| || ||  ||||||||||||||||||||||||||||| ||| |||||||||||||    
T  30651024 tgttttatcttggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgatctggtcgtgactcaacc 30650925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 42926763 - 42926860
Alignment:
Q  28 ttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccacgaaac--gtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||| ||||||||||| |||||||||||||||||  ||||  |||||||||||||  ||||||||||||||| ||||||||||||||||||    
T  42926763 ttatcctggaggcggcgtggttgatagtctaccttgcacaattttgggcagtgccacgaaacgtgtcttaaagagagcggcctgatcgtgactcaacc 42926860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 12797020 - 12796921
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||||||||||||||| ||||||  |||| |||| || ||  |||||||| |||||||||||||||||||| ||| |||||||||||||    
T  12797020 tgttttatcctggagacggcgtggttgatagtctgtcttgaacaattttgggcagtgccacaaaacgtcttaaagagagcgatctggtcgtgactcaacc 12796921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 25478297 - 25478396
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    |||||||| |||||| ||||||||||| |||||| |||||||||| || ||  |||| |||||||||||||||||||||||||||| | |||||||||||    
T  25478297 tgttttattctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgtcacgaaacgtcttaaagagagcgacctggttgtgactcaacc 25478396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 25497325 - 25497424
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| ||||||  ||||||||| || ||  ||||  ||||||||||||||||||||||||||| |||||||||||||    
T  25497325 tgttttatcctggaggcggcgtggttgatagtctgacttgcacaaatttgggcagtgttacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 25497424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 31326834 - 31326735
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    |||||||||||||||  |||||||||| |||||| |||||||||| || ||  |||| || ||||||||||||||||||||||||| |||||||||||||    
T  31326834 tgttttatcctggaggtggcgtggttgatagtctgccttgcacaattttgggcagtggcatgaaacgtcttaaagagagcgacctggtcgtgactcaacc 31326735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 35602017 - 35601918
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| || ||| ||||||||||||||||||||| ||||||||||| |||||| ||||||    
T  35602017 tgttttatcctggaggcggcgtggttgatactctgtcttgcacaattttggacagtgccacgaaacgtcttaaaaagagcgacctggtcgtgattcaacc 35601918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 7737851 - 7737950
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| ||||||  ||||||||| || ||  |||||||| |||| |||||||||||||||| || |||||||||||||    
T  7737851 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacaaaacttcttaaagagagcgacatggtcgtgactcaacc 7737950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 47 - 124
Target Start/End: Complemental strand, 19538458 - 19538380
Alignment:
Q  47 gttgttagtctaccttgcacaa-cttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacccg 124  Q
    |||||||||||||||||||||| || ||||||||||  |||| |||||||||| ||||||||| |||||||||||||||    
T  19538458 gttgttagtctaccttgcacaaactcggatagtgccgtgaaatgtcttaaagaaagcgacctggtcgtgactcaacccg 19538380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 35638997 - 35639095
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaac 121  Q
    ||||||||||||||| ||||||||||| ||  ||  ||||||||| || ||  ||||||||||||||||||||| |||||||||||||||||| |||||    
T  35638997 tgttttatcctggaggcggcgtggttgatacgctgtcttgcacaattttgggcagtgccacgaaacgtcttaaaaagagcgacctgatcgtgattcaac 35639095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 19578414 - 19578513
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttg-gatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||| ||||||| | || |||||| |||||| |||||||||| ||  | ||||||||| |||||||||||||||||||| ||| |||||||||||||    
T  19578414 tgttttaccctggaggcagcatggttgatagtcttccttgcacaattttaggtagtgccacaaaacgtcttaaagagagcgatctggtcgtgactcaacc 19578513  T

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Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 124
Target Start/End: Complemental strand, 28855077 - 28854999
Alignment:
Q  47 gttgttagtctaccttgcacaa-cttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacccg 124  Q
    ||||||||||||||||| |||| |||||||||||||  ||||||||||||||| ||||||| | | |||||||||||||    
T  28855077 gttgttagtctaccttgtacaaacttggatagtgccgtgaaacgtcttaaagaaagcgaccgggttgtgactcaacccg 28854999  T

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Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 28603375 - 28603294
Alignment:
Q  42 gcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||| ||||||  ||||||||| || ||| |||| |||||||||| ||||||||||||||||| |||||||||||||    
T  28603375 gcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgttttaaagagagcgacctggtcgtgactcaacc 28603294  T

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Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 24 - 120
Target Start/End: Original strand, 40847595 - 40847692
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggat-agtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaa 120  Q
    |||||||||| ||||  |||||||||| |||| | ||||||||||||| ||  |||||||| |||||||||||||||| |||| || |||||||||||    
T  40847595 tgttttatccaggaggtggcgtggttgatagtttgccttgcacaactttgaacagtgccacaaaacgtcttaaagagaacgacatggtcgtgactcaa 40847692  T

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Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 11658882 - 11658994
Alignment:
Q  18 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgga-tagtgccacgaaacgtcttaaagagagcgacctgatcgtgac 116  Q
    |||| |||||||||| ||||| ||| |  |||||||||||||||||||||| || || |||||||  |||| |||||||||| |||||| || || ||||    
T  11658882 ctggactgttttatcatggaggcggtgcagttgttagtctaccttgcacaaattcgagtagtgccgtgaaatgtcttaaagaaagcgacttggtcatgac 11658981  T
Q  117 tcaacccgataat 129  Q
    |||||| ||||||    
T  11658982 tcaacctgataat 11658994  T

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Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 39542945 - 39542900
Alignment:
Q  75 tagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaa 120  Q
    |||||||  |||||||||||||||||||||||||||||||||||||    
T  39542945 tagtgccgtgaaacgtcttaaagagagcgacctgatcgtgactcaa 39542900  T

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Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 124
Target Start/End: Original strand, 6297907 - 6297986
Alignment:
Q  46 ggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacccg 124  Q
    ||||||||||||||||||||||| || || |||||||  ||   |||||||||| ||||||||| |||||||||||||||    
T  6297907 ggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgactcaacccg 6297986  T

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Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 122
Target Start/End: Original strand, 21523736 - 21523818
Alignment:
Q  40 cggcgtggttgttagtctaccttgcacaa-cttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||| |||||| ||||||||||  ||||  ||||||||||||||| ||||||| ||| ||||| |||||||||||||    
T  21523736 cggcgtggttgatagtctcccttgcacaattttgggcagtgccacgaaacgt-ttaaagatagcaacctggtcgtgactcaacc 21523818  T

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Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 29907368 - 29907470
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaaccc 123  Q
    ||||||||||||||| |||||| |||| |||   ||||| ||||| ||  |||||| | |||||||||||||| ||| ||||||| |||||||| |||||    
T  29907368 tgttttatcctggaggcggcgtagttgatag---accttacacaattttaatagtgtcgcgaaacgtcttaaaaagatcgacctggtcgtgacttaaccc 29907464  T
Q  124 gataat 129  Q
    | ||||    
T  29907465 ggtaat 29907470  T

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Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 30631674 - 30631575
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttg-gatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    |||||||||||||||  |||||||||| ||||||  ||||||||| ||  |  | |||||||||| || |||||||||| ||||| ||||||||||||||    
T  30631674 tgttttatcctggaggtggcgtggttgatagtctttcttgcacaatttttggcaatgccacgaaaagttttaaagagagtgacctaatcgtgactcaacc 30631575  T

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Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 122
Target Start/End: Original strand, 19094497 - 19094594
Alignment:
Q  26 ttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||| ||| ||||||| || | | |||||||||| || ||  ||| |||  |||||| |||| ||||||||||||||||||||||||||    
T  19094497 ttttatcctggaggcggtgtggttgatattttgccttgcacaattttgggcagtaccaaaaaacgttttaaggagagcgacctgatcgtgactcaacc 19094594  T

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Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 122
Target Start/End: Complemental strand, 29677860 - 29677763
Alignment:
Q  26 ttttatcctggagacggcgtggttgttagtctaccttgcacaacttg-gatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    |||||||||| || |||| |||||| |||| | |||||||||| ||  |  |||||||| ||| ||||||| |||||||||||| |||||||||||||    
T  29677860 ttttatcctgtaggcggcttggttgatagtttgccttgcacaatttttggcagtgccactaaatgtcttaatgagagcgacctggtcgtgactcaacc 29677763  T

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Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 160137 - 160037
Alignment:
Q  23 ctgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaac 121  Q
    ||||||||||  |||| || || ||||| ||| ||||||||||||| || || ||||| |  ||||||| ||||||||||||||||| ||||| ||||||    
T  160137 ctgttttatctcggaggcgacgcggttgatagcctaccttgcacaattttgggtagtgtcgtgaaacgtattaaagagagcgacctggtcgtgtctcaac 160038  T
Q  122 c 122  Q
    |    
T  160037 c 160037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 96
Target Start/End: Complemental strand, 28945266 - 28945191
Alignment:
Q  22 gctgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttggatagtgccacgaaacgtcttaaa 96  Q
    ||||||||||||||||| |  || |||||||||| |||||||||| |||| |  ||||||| ||||||||||||||    
T  28945266 gctgttttatcctggaggcaacgcggttgttagtataccttgcacaaactcgtgtagtgccgcgaaacgtcttaaa 28945191  T

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Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 44683222 - 44683140
Alignment:
Q  48 ttgttagtctaccttgcacaa-cttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacccgataat 129  Q
    ||||||||||||||| ||||| || |||||||||| |||||||| ||||||| | | |  | ||||| |||||||||||||||    
T  44683222 ttgttagtctaccttacacaaactcggatagtgccgcgaaacgttttaaagaaaacaatataatcgtaactcaacccgataat 44683140  T

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Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 17545298 - 17545398
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaac-ttggatagtgccacgaaacgtcttaa-agagagcgacctgatcgtgactcaac 121  Q
    ||||||||||| |||  |||||||||| ||||||   ||||||||| ||| | |||| ||||||||||||||| | | | |||||||||||| |||||||    
T  17545298 tgttttatcctcgaggtggcgtggttgatagtcttttttgcacaactttgaaaagtgtcacgaaacgtcttaagaaaaaacgacctgatcgtaactcaac 17545397  T
Q  122 c 122  Q
    |    
T  17545398 c 17545398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 119; Significance: 9e-61; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 15 - 165
Target Start/End: Original strand, 33089334 - 33089484
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||||    
T  33089334 gatctgagctgttttatcctagagacggcgtggttgttagtctaccttgcacaactagggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtg 33089433  T
Q  115 actcaacccgataattcctttggcagtatttctgatttctaaattcaaaac 165  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  33089434 actcaacccggtaattcctttggcagtatttttgatttctaaattcaaaac 33089484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 15 - 169
Target Start/End: Complemental strand, 20810476 - 20810321
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||  |||||||||||||||||| ||||||| |||||    
T  20810476 gatctgagctgttttatcctggagacggcgtggttgttagtctaccttgcacaactagggtagtgctgcgaaacgtcttaaagagaacgacctggtcgtg 20810377  T
Q  115 actcaacccgataattcctttggcagta-tttctgatttctaaattcaaaactaac 169  Q
    ||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||    
T  20810376 actcaacccgataattcctttggtagtattttcttatttctaaattcaaaactaac 20810321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 38436982 - 38437109
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  38436982 gatctgggctgttttatcctggagacggcgtggttgttagtctacctttcacaacttggatagtgccacgaaacgtcttaaagaaagtgacctgatcgtg 38437081  T
Q  115 actcaacccgataattcctttggcagta 142  Q
    |||||||||| ||||| ||||| |||||    
T  38437082 actcaacccggtaatttctttgacagta 38437109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 53119631 - 53119504
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||    
T  53119631 gatctggcctgttttatcctagagacggcgtggttgttagtctaccttgcacaacttgagtagtgccgcgaaacgtcttaaagagagcgacctgatcgtg 53119532  T
Q  115 actcaacccgataattcctttggcagta 142  Q
    |||||||||| |||||||||||||||||    
T  53119531 actcaacccggtaattcctttggcagta 53119504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 15 - 144
Target Start/End: Complemental strand, 13022131 - 13022001
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||| ||||||||||| |||||    
T  13022131 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgttttaaaaagagcgacctggtcgtg 13022032  T
Q  115 actcaacccgataattcc-tttggcagtatt 144  Q
    |||||||||||||||||| ||||||||||||    
T  13022031 actcaacccgataattccttttggcagtatt 13022001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 15 - 157
Target Start/End: Complemental strand, 26962163 - 26962021
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||| |||||    
T  26962163 gatctgtgctgttttatcctggagacggcgtgtttgttagtctaccttgcacaacttgtgtagtgccacgaaacgtcttaaagagagcgatctggtcgtg 26962064  T
Q  115 actcaacccgataattcctttggcagtatttctgatttctaaa 157  Q
    |||||||||  |||||||||||| |||| ||||||||| ||||    
T  26962063 actcaacccagtaattcctttggtagtagttctgatttttaaa 26962021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 3476938 - 3477052
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||| |||||||||||||||| ||||||||| ||||||    
T  3476938 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 3477037  T
Q  116 ctcaacccgataatt 130  Q
    |||| |||| |||||    
T  3477038 ctcaccccggtaatt 3477052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 17368822 - 17368709
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||| |||||||||||||||| ||||||||| ||||||    
T  17368822 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 17368723  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  17368722 ctcaccccggtaat 17368709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 20090654 - 20090767
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  | ||||||| |||||||||||||||||||||||||| ||||||    
T  20090654 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 20090753  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  20090754 ctcatcccggtaat 20090767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 20095779 - 20095892
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  | ||||||| |||||||||||||||||||||||||| ||||||    
T  20095779 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 20095878  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  20095879 ctcatcccggtaat 20095892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 34129161 - 34129274
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || | ||||||| |||||||||||||||| ||||||||| ||||||    
T  34129161 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 34129260  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  34129261 ctcagcccggtaat 34129274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 8069772 - 8069674
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| ||||||  ||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  8069772 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaatttggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 8069674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 55128893 - 55128780
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| | ||||||| |||||||||||||||| | ||||||| ||||||    
T  55128893 atctgggctgttttatcctggagacggcgcggttgctagtctaccttacacaacttaggtagtgccgcgaaacgtcttaaagaaaacgacctggtcgtga 55128794  T
Q  116 ctcaacccgataatt 130  Q
    ||| |||||||||||    
T  55128793 ctc-acccgataatt 55128780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 15763022 - 15763135
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||  |  | ||||||| |||||||||||||||||||||||||| ||||||    
T  15763022 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacagttcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 15763121  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  15763122 ctcatcccggtaat 15763135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 15768183 - 15768286
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||  |  | ||||||| |||||||||||||||||||||||||| ||||||    
T  15768183 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacagttcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 15768282  T
Q  116 ctca 119  Q
    ||||    
T  15768283 ctca 15768286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 3482415 - 3482529
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || | || |||| ||||| |||||||||| ||||||||| ||||||    
T  3482415 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaaattaggtaatgccgcgaaaagtcttaaagaaagcgacctggtcgtga 3482514  T
Q  116 ctcaacccgataatt 130  Q
    ||||  |||||||||    
T  3482515 ctcactccgataatt 3482529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 23 - 129
Target Start/End: Complemental strand, 54270740 - 54270634
Alignment:
Q  23 ctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||| ||||| |||||||||| ||||||||| |||||||||| ||    
T  54270740 ctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaatgtcttaaagaaagcgacctggtcgtgactcaccc 54270641  T
Q  123 cgataat 129  Q
    || ||||    
T  54270640 cggtaat 54270634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 17364168 - 17364053
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttg--cacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgt 113  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||  ||||| || | ||||||| |||||||||||||||| ||||||||| ||||    
T  17364168 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgt 17364069  T
Q  114 gactcaacccgataat 129  Q
    |||||| |||| ||||    
T  17364068 gactcaccccggtaat 17364053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 758368 - 758467
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || || |||||||||||||||||||||||||||||| ||| |||||||||||||    
T  758368 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggtagtgccacgaaacgtcttaaagagagcgatctggtcgtgactcaacc 758467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 4117592 - 4117695
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||| | ||||||| ||||| ||||||| || ||||||||| ||||||    
T  4117592 atctgggctgttttatcctggagacagcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaatgtcttaacgaaagcgacctggtcgtga 4117691  T
Q  116 ctca 119  Q
    ||||    
T  4117692 ctca 4117695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 23666123 - 23666222
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  23666123 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 23666222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 24038371 - 24038470
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  24038371 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 24038470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 39775728 - 39775827
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  39775728 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 39775827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 49971424 - 49971523
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||| ||| |||||| |||||||||| || ||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  49971424 tgttttatcctggaggcggcgtgattgatagtctgccttgcacaattttggatagtgccacgaaacgtcttaaagagatcgacctggtcgtgactcaacc 49971523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 30341836 - 30341949
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    |||||||||||||||||||||||| || | ||||| ||||||||||| ||||| || | ||||||| |||||||||||||||| || |||||| ||||||    
T  30341836 atctgggctgttttatcctggagatggtgcggttgctagtctaccttacacaatttaggtagtgccgcgaaacgtcttaaagaaagtgacctggtcgtga 30341935  T
Q  116 ctcaacccgataat 129  Q
    |||| |||||||||    
T  30341936 ctcaccccgataat 30341949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 3672679 - 3672580
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||  ||||||| ||||||||||||||||||||||||| |||||||||||||    
T  3672679 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacc 3672580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 3692711 - 3692612
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||  ||||||| ||||||||||||||||||||||||| |||||||||||||    
T  3692711 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacc 3692612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 14438695 - 14438794
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| | |||| |||||||||| || || ||||||||||||||||||||||||| |||||||| |||||||||||||    
T  14438695 tgttttatcctggaggcggcgtggttgattgtctgccttgcacaattttgggtagtgccacgaaacgtcttaaagagggcgacctggtcgtgactcaacc 14438794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 18467318 - 18467219
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||  |||||| |||||||||| || ||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  18467318 tgttttatcctggaggcggcgtggttaatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 18467219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 20520147 - 20520048
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||| ||||| ||||||||||| |||||| |||||||||| |||||  |||||||||||||||||||||||||| |||||| |||||||||||||    
T  20520147 tgttttatcttggaggcggcgtggttgatagtctcccttgcacaatcttgggcagtgccacgaaacgtcttaaagagagtgacctggtcgtgactcaacc 20520048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 55431408 - 55431309
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttg-gatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| ||||||| || ||  || |||| ||||||||||||||||||||||||||||||||||||||||||    
T  55431408 tgttttatcctggaggcggcgtggttgatagtctgccttgcataatttttgacagtgtcacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 55431309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 17357941 - 17357836
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttg--cacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgt 113  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||  ||||| || | ||||||| |||||||||||||||| | ||||||| ||||    
T  17357941 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaatcgacctggtcgt 17357842  T
Q  114 gactca 119  Q
    ||||||    
T  17357841 gactca 17357836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 7571218 - 7571317
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||| ||| ||||||  ||||||||| || ||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  7571218 tgttttatcctggaggcggcgtgattgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 7571317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 12112641 - 12112740
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||| ||||||| ||||||  |||||||||||| ||| ||||||||||||||||||||||||||||||||  |||||| ||||||    
T  12112641 tgttttatcctggaggcggtgtggttgatagtctgtcttgcacaactttggacagtgccacgaaacgtcttaaagagagcgacctagtcgtgattcaacc 12112740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 2617255 - 2617356
Alignment:
Q  23 ctgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaac 121  Q
    |||||||||||||||| ||||| ||||||||||||||||||||| |||| |  ||||||| |||||||||||||||| |||||| || | ||||||||||    
T  2617255 ctgttttatcctggaggcggcgcggttgttagtctaccttgcacaaactcgagtagtgccgcgaaacgtcttaaagaaagcgacatggttgtgactcaac 2617354  T
Q  122 cc 123  Q
    ||    
T  2617355 cc 2617356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 3033737 - 3033638
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||| ||| ||| ||||||| |||||| |||||||||| || ||  ||||||| ||||||||||||||||||||||||| |||||||||||||    
T  3033737 tgttttatccttgaggcggtgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacc 3033638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 3419088 - 3418989
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    |||||||||||| ||  |||||||||| |||||| |||||||||| || ||  |||||||||||||||||||||||||||||| || |||||||||||||    
T  3419088 tgttttatcctgaaggtggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacttggtcgtgactcaacc 3418989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 8883263 - 8883168
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactc 118  Q
    ||||||||||||||| | ||||||||| ||||||  ||||||||| || ||  ||||||||||||||||||||||||||||||||| |||||||||    
T  8883263 tgttttatcctggaggcagcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactc 8883168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 8888023 - 8887924
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| || ||| ||||| || |||||||||||||||||||||||| |||||||||||||    
T  8888023 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttggacagtgcaacaaaacgtcttaaagagagcgacctggtcgtgactcaacc 8887924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 22 - 120
Target Start/End: Original strand, 21494300 - 21494399
Alignment:
Q  22 gctgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaa 120  Q
    |||||||||||| |||||||||| ||||||||||||||||||||| ||||||| || || |  || || ||||||||||||||||||| |||||||||||    
T  21494300 gctgttttatcccggagacggcgcggttgttagtctaccttgcacaaacttgggtactgtcgtgatacatcttaaagagagcgacctggtcgtgactcaa 21494399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 122
Target Start/End: Original strand, 27605133 - 27605234
Alignment:
Q  22 gctgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaa 120  Q
    ||||||||||||| ||| ||| || |||||||||||||||||||| |||| || ||||||  ||||| ||||||||||||||||| || |||||||||||    
T  27605133 gctgttttatcctagaggcggtgtagttgttagtctaccttgcacaaactcgggtagtgctgcgaaatgtcttaaagagagcgacttggtcgtgactcaa 27605232  T
Q  121 cc 122  Q
    ||    
T  27605233 cc 27605234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 29715737 - 29715638
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||| ||| ||||||||||| |||||| ||| |||||| || ||| |||| |||||||||||||||| ||||||| ||| |||||||||||||    
T  29715737 tgttttatcctagaggcggcgtggttgatagtcttcctagcacaattttggacagtgtcacgaaacgtcttaaaaagagcgatctggtcgtgactcaacc 29715638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 10321546 - 10321444
Alignment:
Q  16 atctgggctgtttt-atcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    |||||||||||||| || ||||||||  || ||||| ||||||||||||||||| ||   ||||||| |||||||||||||||| ||||||||| |||||    
T  10321546 atctgggctgtttttattctggagacaacgcggttgctagtctaccttgcacaatttaagtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 10321447  T
Q  115 act 117  Q
    |||    
T  10321446 act 10321444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 24 - 120
Target Start/End: Original strand, 32474680 - 32474775
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaa 120  Q
    ||||||||||||||||||||||||||| ||||||  |||||||||  ||||  ||||||||||||||||||  ||||||||||||| ||||| |||||    
T  32474680 tgttttatcctggagacggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtctt--agagagcgacctggtcgtggctcaa 32474775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 120
Target Start/End: Original strand, 12965873 - 12965970
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaa 120  Q
    ||||||||||||||| ||||||||||| ||||||  |||||||||  ||||  |||||||  |||||||||||||||||||||||| | |||||||||    
T  12965873 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccataaaacgtcttaaagagagcgacctggttgtgactcaa 12965970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 18472100 - 18472002
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||||  || |  ||||||||| ||| || |||||||||||||||| |||||||||||||    
T  18472100 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccacg-aacatcgtaaagagagcgacctggtcgtgactcaacc 18472002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 29350333 - 29350234
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| |||| |||| | | |||| |||||||||| || ||  ||||||||||||||||||||||| |||||| || |||||||||||||    
T  29350333 tgttttatcctggaggcggcatggtagatggtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagaaagcgacatggtcgtgactcaacc 29350234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 3657240 - 3657338
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggat-agtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaac 121  Q
    ||||||||| |||||  ||| |||||| ||||||  ||||||||| || ||  ||||||||||||||||||||||||||||| || |||||||||||||    
T  3657240 tgttttatcttggaggtggcatggttgatagtctgtcttgcacaattttgaacagtgccacgaaacgtcttaaagagagcgatctaatcgtgactcaac 3657338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 26706877 - 26706803
Alignment:
Q  26 ttttatcctggagacggcgtggttgttagtctaccttgcac-aacttggatagtgccacgaaacgtcttaaagag 99  Q
    ||||||||||||| |||||  |||||||||||||||||||| ||||||||||||||  |||||||||||| ||||    
T  26706877 ttttatcctggaggcggcgcagttgttagtctaccttgcacaaacttggatagtgctgcgaaacgtcttagagag 26706803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 10586177 - 10586283
Alignment:
Q  18 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgac 116  Q
    ||||||||||||||||||||| |  |  ||||||||||||||||||||||| || || |||||||  ||   |||||||||| ||||||||| |||||||    
T  10586177 ctgggctgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgac 10586275  T
Q  117 tcaacccg 124  Q
    ||||||||    
T  10586276 tcaacccg 10586283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 101
Target Start/End: Complemental strand, 16013801 - 16013724
Alignment:
Q  26 ttttatcctggagacggcgtggttgttagtctaccttgcacaa--cttggatagtgccacgaaacgtcttaaagagag 101  Q
    ||||||||||||| ||||||||| | ||||||| |||||||||   || ||||||| |||||||||||||||||||||    
T  16013801 ttttatcctggaggcggcgtggtggatagtctatcttgcacaatttttagatagtgtcacgaaacgtcttaaagagag 16013724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 122
Target Start/End: Complemental strand, 27708918 - 27708872
Alignment:
Q  76 agtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||    
T  27708918 agtgccacgaaacgtcttaaagagaacgacctggtcgtgactcaacc 27708872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 25726845 - 25726890
Alignment:
Q  75 tagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaa 120  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||    
T  25726845 tagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaa 25726890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 795399 - 795446
Alignment:
Q  18 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgca 65  Q
    ||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  795399 ctgggctgttttatcctggaggcggcacggttgttagtctaccttgca 795446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 12971633 - 12971732
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||| ||| ||||||| ||| || |||  ||||||||| || ||  | |||||||||||||||||||||||| |||||| |||||| ||||||    
T  12971633 tgttttatcctagaggcggcgtgattgataatctgtcttgcacaattttgggcaatgccacgaaacgtcttaaagagagagacctggtcgtgagtcaacc 12971732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 1688910 - 1688980
Alignment:
Q  48 ttgttagtctaccttgcacaa-cttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgact 117  Q
    |||||| |||||||||||||| || || ||||||| | |||||||||||||| ||||||||| ||||||||    
T  1688910 ttgttaatctaccttgcacaaactcgggtagtgccgcaaaacgtcttaaagaaagcgacctggtcgtgact 1688980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 27709029 - 27708959
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccacgaaacgtctt 93  Q
    ||||||||||||||| ||||||||||| |||||||||||||| ||  ||||  ||||||| ||||||||||    
T  27709029 tgttttatcctggaggcggcgtggttgatagtctaccttgcataattttgggcagtgccatgaaacgtctt 27708959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 2207759 - 2207804
Alignment:
Q  75 tagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaa 120  Q
    ||||||||| |||||||||||| ||||||||||| |||||||||||    
T  2207759 tagtgccactaaacgtcttaaaaagagcgacctggtcgtgactcaa 2207804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 23661464 - 23661508
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa 68  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||||    
T  23661464 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaa 23661508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 124
Target Start/End: Complemental strand, 31002770 - 31002692
Alignment:
Q  46 ggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacccg 124  Q
    ||||||||||||||||||||||| || || |||||||  ||   |||||||||| ||||||||| |||||||||||||||    
T  31002770 ggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctg-tcgtgactcaacccg 31002692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 129
Target Start/End: Original strand, 1689977 - 1690065
Alignment:
Q  41 ggcgtggttgttagtctaccttgcac-aacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacccgataat 129  Q
    ||||||| ||||||||||| |||||| |||| | ||||| ||||||||||||||||| | | |||  || |||| |||||||||||||||    
T  1689977 ggcgtggatgttagtctactttgcacaaactcgaatagtaccacgaaacgtcttaaa-aaaacgatttggtcgtaactcaacccgataat 1690065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 118; Significance: 4e-60; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 14582203 - 14582047
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||| |||||| ||||||||||||||||||||||||     
T  14582203 gatctggactgttttatcctggagacggtgtggttgttagtctaccttgcacaactagggtagtgccgcgaaacttcttaaagagagcgacctgatcgta 14582104  T
Q  115 actcaacccgataattcctttggcagtatttctgatttctaaattcaaaactaacaat 172  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  14582103 actcaacccgataattccttt-gcagtatttctgatatctaaattcaaaactaacaat 14582047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 39747156 - 39747321
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||| |||||    
T  39747156 gatctgggctgttttatcctggagacgacgtggttgctagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcaacctggtcgtg 39747255  T
Q  115 actcaacccgataattcctttggcagtatttctga-tttctaaattcaaaactaacaatacataaa 179  Q
    ||||||||||||||||||||||||| || |||||| ||| |||||||||||||||||  |||||||    
T  39747256 actcaacccgataattcctttggcactacttctgattttttaaattcaaaactaacacaacataaa 39747321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 15 - 170
Target Start/End: Original strand, 5602416 - 5602571
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||  |||||||||||||||||||||| ||| |||||    
T  5602416 gatctggactgttttatcttggagacggcgtggttgttagtctaccttgcacaactagggtagtgcagcgaaacgtcttaaagagagcgatctggtcgtg 5602515  T
Q  115 actcaacccgataattcctttggcagtatttctgatttctaaattcaaaactaaca 170  Q
    |||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||    
T  5602516 actcaacccggtaattcctttggcagtacttctgatttttaaattcaaaactaaca 5602571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 15 - 144
Target Start/End: Complemental strand, 38734379 - 38734250
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||||    
T  38734379 gatctggactgttttatcctggagacggcgtggttgttagtctaccttgcacaactagggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtg 38734280  T
Q  115 actcaacccgataattcctttggcagtatt 144  Q
    ||||||||||||||||||||||||||||||    
T  38734279 actcaacccgataattcctttggcagtatt 38734250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 26651160 - 26651281
Alignment:
Q  18 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgact 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||| |||||||||||| |||||| ||||||||    
T  26651160 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcaaaacatcttaaagagagtgacctggtcgtgact 26651259  T
Q  118 caacccgataattcctttggca 139  Q
    ||||||||||||||||||||||    
T  26651260 caacccgataattcctttggca 26651281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 15 - 124
Target Start/End: Complemental strand, 10106207 - 10106098
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  10106207 gatctgggttgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtg 10106108  T
Q  115 actcaacccg 124  Q
    ||||||||||    
T  10106107 actcaacccg 10106098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 15 - 144
Target Start/End: Complemental strand, 13890917 - 13890787
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||| |||||    
T  13890917 gatctgggctgttttatcctggagacggtgtggttgttagtctaccttgcacaacttgggtagtgccgcaaaacgtcttaaagagagcgacctggtcgtg 13890818  T
Q  115 actcaacccgata-attcctttggcagtatt 144  Q
    |||||||||| ||  ||| ||||||||||||    
T  13890817 actcaacccggtattttcttttggcagtatt 13890787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 15 - 170
Target Start/End: Original strand, 19422865 - 19423025
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctac----cttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgat 110  Q
    |||||||||| |||||||||||||| ||||| |||||||||||||    |||||||||||||| ||||||  |||||||||||||||||||||| |||||    
T  19422865 gatctgggctattttatcctggagatggcgtagttgttagtctacctaccttgcacaacttgggtagtgcagcgaaacgtcttaaagagagcgatctgat 19422964  T
Q  111 cgtgactcaacccgataattcctttggcagtatttctga-tttctaaattcaaaactaaca 170  Q
    |||||||||||||  ||||||||||| ||||| |||||| ||| |||||||||||||||||    
T  19422965 cgtgactcaacccagtaattcctttgccagtacttctgattttttaaattcaaaactaaca 19423025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 11251105 - 11251218
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||| |||||||||||||||| ||||||||| ||||||    
T  11251105 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 11251204  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  11251205 ctcaccccggtaat 11251218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 37404408 - 37404521
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||| |||||||||||||||| ||||||||| ||||||    
T  37404408 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 37404507  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  37404508 ctcaccccggtaat 37404521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 36684707 - 36684820
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  | ||||||| |||||||||||||||||||||||||| ||||||    
T  36684707 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 36684806  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  36684807 ctcatcccggtaat 36684820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 37409529 - 37409642
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||||||||||||| | ||||||| |||||||||||||||| ||||||||| ||||||    
T  37409529 atctgggctgttttatcctggaaacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 37409628  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  37409629 ctcaccccggtaat 37409642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 3584704 - 3584591
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || | |||| || |||||||||||||||| ||||||||| ||||||    
T  3584704 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagttccgcgaaacgtcttaaagaaagcgacctggtcgtga 3584605  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  3584604 ctcaccccggtaat 3584591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 5725082 - 5724969
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| || | ||||||| |||||||||||||||| ||||||||| ||||||    
T  5725082 atctgtgctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 5724983  T
Q  116 ctcaacccgataat 129  Q
    |||| | |||||||    
T  5724982 ctcacctcgataat 5724969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 27716546 - 27716433
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    |||||||||||||||||||||||||| ||  |||| |||||||||||||||||||| | ||||||| |||||||||||||||| ||||||||| ||||||    
T  27716546 atctgggctgttttatcctggagacgacgctgttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 27716447  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  27716446 ctcaccccggtaat 27716433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 19799013 - 19799112
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| ||||||  ||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  19799013 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttggatagtgccacgaaacgtcttaaagagagcgatctgatcgtgactcaacc 19799112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 34318219 - 34318329
Alignment:
Q  19 tgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactc 118  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||| |  | ||||||| ||||||||||||||||||||||| || |||||||||    
T  34318219 tgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacttggtcgtgactc 34318318  T
Q  119 aacccgataat 129  Q
    | |||| ||||    
T  34318319 atcccggtaat 34318329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 5730208 - 5730095
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||| ||||||||||||||||||||| | ||||| ||||||||||||||||| || | |||| || |||||||||||||||| ||||||||| ||||||    
T  5730208 atctgtgctgttttatcctggagacggtgcggttgctagtctaccttgcacaatttaggtagttccgcgaaacgtcttaaagaaagcgacctggtcgtga 5730109  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  5730108 ctcaccccggtaat 5730095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 48246675 - 48246756
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaag 97  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||| |||||||||||||||    
T  48246675 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaag 48246756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 35 - 129
Target Start/End: Original strand, 11387841 - 11387935
Alignment:
Q  35 ggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacccgataat 129  Q
    |||||||||| ||||| |||||||||||||||||||| | ||||||| |||||||||||||| | ||||||||| |||||||||| |||||||||    
T  11387841 ggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtcgtgactcaccccgataat 11387935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 51041463 - 51041559
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaac 121  Q
    ||||||||| ||||| ||||||||||| |||||| |||||||||| ||||  ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  51041463 tgttttatcttggaggcggcgtggttgatagtctgccttgcacaatttgggcagtgccacgaaacgtcttaaa-agagcgacctggtcgtgactcaac 51041559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 10135551 - 10135452
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttg-gatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||| ||| ||||||||||| | |||| |||||||||| ||  | |||||||||||||||||||||||||||||||||| |||||||||||||    
T  10135551 tgttttatcctagaggcggcgtggttgattgtctgccttgcacaattttaggtagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 10135452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 10140184 - 10140085
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgga-tagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||| |||  |||||||||| | |||| |||||||||| || || |||||||||||||||| |||||||||||||||||||||||||||||||    
T  10140184 tgttttatcctagaggtggcgtggttgattgtctgccttgcacaattttgagtagtgccacgaaacgtgttaaagagagcgacctgatcgtgactcaacc 10140085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 16035703 - 16035604
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| || |||  |||||||||||| ||| ||||||||||||||| |||||||| |||||||| |||||||||||||    
T  16035703 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaactttggacagtgccacgaaacgtgttaaagagggcgacctggtcgtgactcaacc 16035604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 23192817 - 23192916
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    |||||||||||||||  |||||||||| |||||| ||||| |||| || ||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  23192817 tgttttatcctggaggaggcgtggttgatagtctgccttgtacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 23192916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 40166075 - 40165976
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||| ||| |||||| ||||||||||| |||||||||| || ||  |||||||||||||||||||||||||||||| || |||||||||||||    
T  40166075 tgttttatcctagaggcggcgttgttgttagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacatggtcgtgactcaacc 40165976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 47455386 - 47455485
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| || ||| | ||||||||||||||||||||||||||||||| |||||||||||||    
T  47455386 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttggacattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 47455485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 16649613 - 16649710
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaac 121  Q
    |||||||||| |||| ||||||||||| ||||||| ||||||||| || ||| |||||||| |||||||||||||||||||||||| ||||||||||||    
T  16649613 tgttttatcccggaggcggcgtggttgatagtctatcttgcacaattttggacagtgccac-aaacgtcttaaagagagcgacctggtcgtgactcaac 16649710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 39588370 - 39588466
Alignment:
Q  27 tttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||  |||||||| | ||||||  ||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  39588370 tttatcctggagtaggcgtggtagatagtctgtcttgcacaattttggacagtgccacgaaacgtcttaaagagagcgacctgatcgtgacttaacc 39588466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 120
Target Start/End: Original strand, 33301180 - 33301277
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaa 120  Q
    ||||||||||||||| ||||||||||| ||||||  ||||||||| || ||  ||||||||||||||||||||||||| ||||||| |||||| ||||    
T  33301180 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagaacgacctggtcgtgattcaa 33301277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 18784549 - 18784647
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttg-gatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    |||||||| |||||| ||||||||||| |||||| |||||||||| ||  |  |||||||||||| |||||||| |||||||||||||||||||||||||    
T  18784549 tgttttattctggaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccacgaaatgtcttaaa-agagcgacctgatcgtgactcaacc 18784647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 47451225 - 47451324
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttg-gatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||| ||||| ||||||||||| ||||||  ||||||||| ||  |  ||||||| ||||||||||||||||||||||||| |||||||||||||    
T  47451225 tgttttatcttggaggcggcgtggttgatagtctgtcttgcacaatttttggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacc 47451324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 104
Target Start/End: Complemental strand, 27711388 - 27711319
Alignment:
Q  35 ggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcga 104  Q
    |||||||||| ||||| |||||||||||||||||||| | ||||||| |||||||||||||||| |||||    
T  27711388 ggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcga 27711319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 12260091 - 12259992
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    |||||||||||  |||||||||||||| ||||||  ||||||||| || ||  |||| ||||||||||||||||||||||||| || ||||| |||||||    
T  12260091 tgttttatcctaaagacggcgtggttgatagtctgtcttgcacaattttgggcagtgtcacgaaacgtcttaaagagagcgacatggtcgtgtctcaacc 12259992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 122
Target Start/End: Complemental strand, 25855213 - 25855167
Alignment:
Q  76 agtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  25855213 agtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 25855167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 46 - 122
Target Start/End: Complemental strand, 3094187 - 3094110
Alignment:
Q  46 ggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||| |||||| |||||||||| || ||  ||||||| ||||||||||||||||||||||||| |||||||||||||    
T  3094187 ggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacc 3094110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 48 - 127
Target Start/End: Original strand, 8267853 - 8267934
Alignment:
Q  48 ttgttagtctaccttgcacaa-cttggatagtgccac-gaaacgtcttaaagagagcgacctgatcgtgactcaacccgata 127  Q
    ||||||||||||||||||||| || |||||||| |   ||||||||||||||| ||||||||| ||||||||||||||||||    
T  8267853 ttgttagtctaccttgcacaaactcggatagtgtcggtgaaacgtcttaaagaaagcgacctggtcgtgactcaacccgata 8267934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 122
Target Start/End: Original strand, 26927738 - 26927821
Alignment:
Q  40 cggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||| |||||| |||||||||| || ||  | |||||||||||||||||||||||||||| |  |||||||||||||    
T  26927738 cggcgtggttgatagtctgccttgcacaattttgggcaatgccacgaaacgtcttaaagagagcgacttagtcgtgactcaacc 26927821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 41097946 - 41098052
Alignment:
Q  18 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgac 116  Q
    ||||||||||||||||||||| |  |  ||||||||||||||||||||||| || || |||||||  ||   |||||||||| ||||||||| |||||||    
T  41097946 ctgggctgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgac 41098044  T
Q  117 tcaacccg 124  Q
    ||||||||    
T  41098045 tcaacccg 41098052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 25188272 - 25188378
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||| |||||||| |  ||||||||||||||||||||| ||||    ||||||| |||||| |||| |||| ||| ||||||| ||||||||||     
T  25188272 tgttttatcttggagacgacacggttgttagtctaccttgcacaaactcaagtagtgccgcgaaacttcttcaagaaagcaacctgatagtgactcaaca 25188371  T
Q  123 cgataat 129  Q
    |||||||    
T  25188372 cgataat 25188378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 27761833 - 27761922
Alignment:
Q  18 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacct 107  Q
    |||| |||||||||||||| |||| |||||||| |||||| | |||||||| || ||| ||||||||||||||| |||||||||| |||||    
T  27761833 ctggactgttttatcctggggacgtcgtggttgatagtctgc-ttgcacaattttggacagtgccacgaaacgttttaaagagagtgacct 27761922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 33380915 - 33381004
Alignment:
Q  18 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggat-agtgccacgaaacgtcttaaagagagcgacct 107  Q
    ||||||||||||||| ||| |||| |||||||| |||||| | |||||||| || ||  |||| |||||||||||||||||||||||||||    
T  33380915 ctgggctgttttatcttggggacgtcgtggttgatagtctgc-ttgcacaattttgagcagtgtcacgaaacgtcttaaagagagcgacct 33381004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 4632958 - 4633025
Alignment:
Q  56 ctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||| || |||||||||| | ||||||||||||||||||||| |  |||||||||||||    
T  4632958 ctaccttgcacaaattcggatagtgccgcaaaacgtcttaaagagagcgacatagtcgtgactcaacc 4633025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 12906251 - 12906166
Alignment:
Q  21 ggctgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacct 107  Q
    |||||||||||||||| | || |||||||| |||||| | |||||||| || ||  ||||||||||||||||||||||||||||||||    
T  12906251 ggctgttttatcctgggg-cgtcgtggttgatagtctgc-ttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacct 12906166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 38620787 - 38620689
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||| ||||| |||||| |||| |||||| |||||||||| || ||| | ||| |||||||||||||||||||| || ||| ||| |||||||||    
T  38620787 tgttttatcttggaggcggcgtagttgatagtctgccttgcacaattttggacaatgc-acgaaacgtcttaaagagagtgatctggtcgcgactcaacc 38620689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 31064056 - 31063968
Alignment:
Q  18 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccacgaaacgtcttaaagagagcgacct 107  Q
    ||||||||||||||||||| |||| |||||||| |||| |  |||| ||||  ||||| ||||||||||||| ||||||||||||||||||    
T  31064056 ctgggctgttttatcctgg-gacgtcgtggttgatagt-ttgcttgaacaattttggaaagtgccacgaaacctcttaaagagagcgacct 31063968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 2493818 - 2493901
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacct 107  Q
    ||||||||||||| | || |||||||| |||| | | |||||||| || ||  ||||||||||||||||||||||||||||||||    
T  2493818 tgttttatcctgggggcgccgtggttgatagtttgc-ttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacct 2493901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 16832143 - 16832099
Alignment:
Q  76 agtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaa 120  Q
    |||| |||| ||||||||||||||||||||||| |||||||||||    
T  16832143 agtgtcacggaacgtcttaaagagagcgacctggtcgtgactcaa 16832099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 27461759 - 27461814
Alignment:
Q  81 cacgaaacgtcttaaagagagcgacctgatcgtgactcaacccgataattcctttg 136  Q
    |||||||| | ||||||||| |||| || ||||||||||||||||||||| |||||    
T  27461759 cacgaaacttattaaagagaacgacatggtcgtgactcaacccgataatttctttg 27461814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 36724809 - 36724720
Alignment:
Q  18 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacct 107  Q
    ||||||||||||||| ||| | || |||||||| | |||| | |||||||| || || ||||||||  |||||||||||||||||||||||    
T  36724809 ctgggctgttttatcttgggggcgtcgtggttgattgtctgc-ttgcacaattttgggtagtgccataaaacgtcttaaagagagcgacct 36724720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 122
Target Start/End: Complemental strand, 11806452 - 11806355
Alignment:
Q  26 ttttatcctggagacggcgtggttgttagtctaccttgcacaacttggat-agtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    |||||| ||| || ||||||||||| |||||| ||||| || |||| |   |||| |||||||| ||||||||||||||| ||| | |||||||||||    
T  11806452 ttttattctgaaggcggcgtggttgatagtctgccttgtaccactttgcgcagtgtcacgaaacatcttaaagagagcgatctggttgtgactcaacc 11806355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 122
Target Start/End: Complemental strand, 33055139 - 33055035
Alignment:
Q  18 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgac 116  Q
    ||||||||||||||||||||| | ||  ||||| ||||||||||||||| |||| || |||||||  ||   |||||||||| |||||| || | |||||    
T  33055139 ctgggctgttttatcctggaggc-gcacggttgatagtctaccttgcacaaactcgggtagtgccgtgattagtcttaaagaaagcgacatggttgtgac 33055041  T
Q  117 tcaacc 122  Q
    ||||||    
T  33055040 tcaacc 33055035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 114; Significance: 9e-58; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 7150 - 7001
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||| ||||     
T  7150 gatctgagctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagaacgacctggtcgta 7051  T
Q  115 actcaacccgataattcctttggcagtatttctgatttctaaattcaaaa 164  Q
    ||||||||||||||||||||||||||||||| | |||||||||| |||||    
T  7050 actcaacccgataattcctttggcagtattttttatttctaaatacaaaa 7001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 15 - 158
Target Start/End: Complemental strand, 1669 - 1526
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  1669 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtg 1570  T
Q  115 actcaacccgataattcctttggcagtatttctgatttctaaat 158  Q
    ||| |||||||||||| ||||| || ||||| ||||||||||||    
T  1569 acttaacccgataatttctttgacaatatttttgatttctaaat 1526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 111; Significance: 5e-56; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 10120800 - 10120958
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  10120800 gatctgggctattttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctgatcgtg 10120899  T
Q  115 actcaacccgataattcctttggcagtatttctgat-ttctaaattcaaaactaacaat 172  Q
    |||||||| | ||||||||||| ||||| ||||||| || ||||||||  |||||||||    
T  10120900 actcaacctggtaattcctttgacagtacttctgatattttaaattcattactaacaat 10120958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 15 - 124
Target Start/End: Complemental strand, 653147 - 653038
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||| |||||    
T  653147 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaaattgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtg 653048  T
Q  115 actcaacccg 124  Q
    ||||| ||||    
T  653047 actcatcccg 653038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 15 - 157
Target Start/End: Original strand, 8083018 - 8083162
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgt 113  Q
    |||||||||||||||||| ||||| ||||| ||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||    
T  8083018 gatctgggctgttttatcttggaggcggcgcggttgttagtctaccttgcactaacttggatagtgccgtgaaacgtcttaaagagagcgacctgatcgt 8083117  T
Q  114 gactcaacccgataattcctttggcagta-tttctgatttctaaa 157  Q
    |||| ||| || ||||| |||||| | || |||||||||| ||||    
T  8083118 gacttaactcggtaatttctttggtattagtttctgatttttaaa 8083162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 171 - 276
Target Start/End: Complemental strand, 52766039 - 52765934
Alignment:
Q  171 atacataaatttgtaaatacgttttgagctttgtaactttcttcaatctagtgagctatcaagatatagtacactaacccnnnnnnnttatgtacaaaac 270  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||       |||||||||||||    
T  52766039 atacataaatttgtaaatacgttttgagctttgtaactttctttaatctagtgagctatcaagatatagtacactaacccaaaaaaattatgtacaaaac 52765940  T
Q  271 aaaagt 276  Q
    ||||||    
T  52765939 aaaagt 52765934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 8980277 - 8980390
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||| |||||||||||||||| ||||||||| ||||||    
T  8980277 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 8980376  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  8980377 ctcaccccggtaat 8980390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 8985397 - 8985510
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||| |||||||||||||||| ||||||||| ||||||    
T  8985397 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 8985496  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  8985497 ctcaccccggtaat 8985510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 13700613 - 13700500
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||| |||||||||||||||| ||||||||| ||||||    
T  13700613 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 13700514  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  13700513 ctcaccccggtaat 13700500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 21299825 - 21299938
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||| |||||||||||||||| ||||||||| ||||||    
T  21299825 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 21299924  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  21299925 ctcaccccggtaat 21299938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 36354279 - 36354166
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  | ||||||| |||||||||||||||||||||||||| ||||||    
T  36354279 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 36354180  T
Q  116 ctcaacccgataat 129  Q
    |||| |||||||||    
T  36354179 ctcatcccgataat 36354166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 54991589 - 54991476
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||| |||||||||||||||| ||||||||| ||||||    
T  54991589 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 54991490  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  54991489 ctcaccccggtaat 54991476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 21304945 - 21305058
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||| ||||| |||||||||| ||||||||| ||||||    
T  21304945 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaaagtcttaaagaaagcgacctggtcgtga 21305044  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  21305045 ctcaccccggtaat 21305058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 36359397 - 36359284
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  | ||||||| |||||||||||||||||||||||||| ||||||    
T  36359397 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 36359298  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  36359297 ctcatcccggtaat 36359284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 39999172 - 39999059
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  | ||||||| |||||||||||||||||||||||||| ||||||    
T  39999172 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 39999073  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  39999072 ctcatcccggtaat 39999059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 40004130 - 40004017
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  | ||||||| |||||||||||||||||||||||||| ||||||    
T  40004130 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 40004031  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  40004030 ctcatcccggtaat 40004017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 41393348 - 41393235
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||| |||||||||||||||| ||||||||| ||||||    
T  41393348 atctgtgctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 41393249  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  41393248 ctcaccccggtaat 41393235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 51019365 - 51019478
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||| |||||||||||||||| ||||||||| ||||||    
T  51019365 atctgggatgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 51019464  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  51019465 ctcaccccggtaat 51019478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 53797732 - 53797619
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || | ||||||| |||||||||||||||| ||||||||| ||||||    
T  53797732 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 53797633  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  53797632 ctcaccccggtaat 53797619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 54343306 - 54343193
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    |||||||||||||||||||| |||||||| ||||| ||||||||||||||||| | || ||||||| |||||||||||||||||||||||||| ||||||    
T  54343306 atctgggctgttttatcctgtagacggcgcggttgctagtctaccttgcacaattcgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 54343207  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  54343206 ctcatcccggtaat 54343193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 54348460 - 54348347
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  | ||||||| |||||||||||||||||||||||||| ||||||    
T  54348460 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 54348361  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  54348360 ctcatcccggtaat 54348347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 47046299 - 47046413
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||| |||||||||||||||| | ||||||| ||||||    
T  47046299 atctgagctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaaacgacctggtcgtga 47046398  T
Q  116 ctcaacccgataatt 130  Q
    |||| |||| |||||    
T  47046399 ctcaccccggtaatt 47046413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 13695262 - 13695149
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    |||| |||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||| |||||| ||||||||| ||||||||| ||||||    
T  13695262 atctaggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacatcttaaagaaagcgacctggtcgtga 13695163  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  13695162 ctcaccccggtaat 13695149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 13710771 - 13710659
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||| |||||||||||||||| ||||| ||| ||||||    
T  13710771 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcga-ctggtcgtga 13710673  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  13710672 ctcaccccggtaat 13710659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 37259877 - 37259976
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgga-tagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || || |||||||||||||||||||||||| ||||||||| |||||||||||||    
T  37259877 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagtagtgccacgaaacgtcttaaagaaagcgacctggtcgtgactcaacc 37259976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 9764013 - 9764115
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||| ||||||| | |||||||||||||||||||||||||| | |||||||||||||| ||||||||   |||||||| ||||||    
T  9764013 atctgggctgttttatcctagagacggtgcggttgttagtctaccttgcacaacttaggtagtgccacgaaacatcttaaagtaggcgacctggtcgtga 9764112  T
Q  116 ctc 118  Q
    |||    
T  9764113 ctc 9764115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 24490132 - 24490026
Alignment:
Q  19 tgggctgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgact 117  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||||| ||||||  ||||| | |||||||||||||||||||||| ||| ||||||||    
T  24490132 tgggctgttttatcctggaggtggcgcggttgttagtctaccttgcacaaacttgattagtgtcgcgaaacgtcttaaagagagcgatctggtcgtgact 24490033  T
Q  118 caacccg 124  Q
    |||||||    
T  24490032 caacccg 24490026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 5271419 - 5271518
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| ||||||  ||||||||| || ||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  5271419 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 5271518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 13521992 - 13522091
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| ||||||  ||||||||| || ||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  13521992 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 13522091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 31269129 - 31269030
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttg-gatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| ||  |  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  31269129 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 31269030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 31273616 - 31273517
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| ||||||  ||||||||| || ||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  31273616 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 31273517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 33463356 - 33463455
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||| |||||  | ||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  33463356 tgttttatcctggaggcggcggggttgacaatctgccttgcacaactttggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 33463455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 37264564 - 37264663
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| ||||||| || || ||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  37264564 tgttttatcctggaggcggcgtggttgatagtctgccttgcataattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 37264663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 34644655 - 34644547
Alignment:
Q  22 gctgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaa 120  Q
    |||||||||||||| || ||||| |||||||||| |||||| ||||| || |||||||| | |||||||||||||||| |||||| ||||||||||||||    
T  34644655 gctgttttatcctgtaggcggcgcggttgttagtttaccttacacaaactcggatagtgtcgcgaaacgtcttaaagaaagcgacatgatcgtgactcaa 34644556  T
Q  121 cccgataat 129  Q
    |||| ||||    
T  34644555 cccggtaat 34644547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 31765981 - 31765882
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||  |||||||||||||||||||||||||| |||||| | |||||||||||    
T  31765981 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagtgacctggttgtgactcaacc 31765882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 31729387 - 31729481
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgact 117  Q
    ||||||||||||||| ||||||| ||| | |||| |||||||||| || || ||||||||||||||||||||||||||||||||||||| |||||    
T  31729387 tgttttatcctggaggcggcgtgattgattgtctgccttgcacaattttgggtagtgccacgaaacgtcttaaagagagcgacctgatcatgact 31729481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 5928219 - 5928318
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggat-agtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||| ||||||| |||||| |||||||||| || ||  |||||||| |||| ||||||||||||||||||| |||||||||||||    
T  5928219 tgttttatcctggaggcggtgtggttgatagtctgccttgcacaattttgagcagtgccactaaacatcttaaagagagcgacctggtcgtgactcaacc 5928318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 8693806 - 8693707
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||| ||| ||||||||||| |||| |  ||||||||| || || ||| |||||||||||||||||||||||||||||| |||||||||||||    
T  8693806 tgttttatccttgaggcggcgtggttgatagtatgtcttgcacaattttgggtagcgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 8693707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 16421124 - 16421025
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    |||||||||||| || ||||||||||| |||||| |||||||||| || ||  |||||||||||| ||||||| |||||||||||| |||||||||||||    
T  16421124 tgttttatcctgtaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtcttaatgagagcgacctggtcgtgactcaacc 16421025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 55251814 - 55251716
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    |||||||||||||||  |||||||||| ||||||  |||||||||  ||||| ||||||||||||||||||||| ||||||||||| |||||||||||||    
T  55251814 tgttttatcctggaggtggcgtggttgatagtctgtcttgcacaattttggacagtgccacgaaacgtcttaaa-agagcgacctggtcgtgactcaacc 55251716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 8030476 - 8030575
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| | |||| |||| ||||||| ||||||||| || ||  |||||||| |||||||||||||||||||||||||| |||| ||||||    
T  8030476 tgttttatcctggaggcagcgttgttgatagtctatcttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctgattgtgattcaacc 8030575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 10318779 - 10318886
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    |||| |||||| ||| ||||| ||||||||||||||||||||||| ||||||||    | ||||| ||||||||||||||||| || |||||||||||||    
T  10318779 tgttctatcctagaggcggcgcggttgttagtctaccttgcacaaacttggatacgatcgcgaaatgtcttaaagagagcgacatggtcgtgactcaacc 10318878  T
Q  123 cgataatt 130  Q
    || |||||    
T  10318879 cggtaatt 10318886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 12823895 - 12823994
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||| |  ||||||||| || ||  |||||||||||| |||||||||||||||||||| || ||||||||||    
T  12823895 tgttttatcctggaggcggcgtggttgatagtttgtcttgcacaattttgggcagtgccacgaaatgtcttaaagagagcgacctggtcatgactcaacc 12823994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 12878334 - 12878235
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggata-gtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    |||||||| ||||||  |||||| ||| |||||| | |||||||| || || | ||| ||||||||||||||||||||||||||||||||||||||||||    
T  12878334 tgttttattctggaggtggcgtgattgatagtctgctttgcacaattttgaaaagtgtcacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 12878235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 47244343 - 47244244
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggat-agtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| ||||||  |||  | || || ||  |||||||||||||||||||||||| ||||||||||||||||||||||    
T  47244343 tgttttatcctggaggcggcgtggttgatagtctttcttcaataattttgaacagtgccacgaaacgtcttaaagagggcgacctgatcgtgactcaacc 47244244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 51698012 - 51697913
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgga-tagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||  |||| || ||||||||||||| ||||||| ||| |||||||||||||    
T  51698012 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagcagtgtcatgaaacgtcttaaaaagagcgatctggtcgtgactcaacc 51697913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 42758756 - 42758854
Alignment:
Q  25 gttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||| |||||| || |||||||| ||||||  ||||||||| || ||  ||||||||||||| ||||||||||||||||||| |||||||||||||    
T  42758756 gttttattctggaggcgacgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacatcttaaagagagcgacctggtcgtgactcaacc 42758854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 39319705 - 39319621
Alignment:
Q  46 ggttgttagtctaccttgcacaacttgga-tagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacccgataat 129  Q
    |||||||||||||||||||||||  | || ||||| |  ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  39319705 ggttgttagtctaccttgcacaaactcgagtagtgtcgtgaaacgtcttaaagaaagcgacctgatcgtgactcaacccggtaat 39319621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 33468973 - 33469072
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||| |||||  ||||||||||  ||||| ||||||||||||| ||  |||||||| |||||||||||||||| ||||||  |||||||||||||    
T  33468973 tgttttatcatggaggtggcgtggttgacagtctgccttgcacaactttgggcagtgccacaaaacgtcttaaagagaacgacctagtcgtgactcaacc 33469072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 24 - 120
Target Start/End: Complemental strand, 2819939 - 2819842
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaa 120  Q
    ||||||||||||||  |||| |||| | ||||||||||||||||| || ||| ||| ||||||||| ||||||||| | ||||||| |||||||||||    
T  2819939 tgttttatcctggacgcggcatggtagatagtctaccttgcacaattttggacagtaccacgaaacatcttaaagaaaacgacctggtcgtgactcaa 2819842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 12874634 - 12874535
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttg-gatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||| ||| | |||| | |||||||| ||  || |||||||||||  |||||||||||||||| ||||| |||||||||||    
T  12874634 tgttttatcctggaggcggcgtgattgatggtctgctttgcacaattttagacagtgccacgaattgtcttaaagagagcgatctgattgtgactcaacc 12874535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 19102072 - 19101973
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgga-tagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| || |||||||| ||||||   |||||||| || || |||||||||||||||||||||| |||| |||||  |||||||| ||||    
T  19102072 tgttttatcctggaggcgacgtggttgatagtctgttttgcacaattttgagtagtgccacgaaacgtcttaaacagagtgacctcgtcgtgacttaacc 19101973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 19906346 - 19906247
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttg-gatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| |||||  |||| ||||||  ||||||||| ||  || |||| |||  ||||||||||| |||||||||||||||||||||||||    
T  19906346 tgttttatcctggaggcggcggagttgatagtctgtcttgcacaattttagacagtgtcactgaacgtcttaaaaagagcgacctgatcgtgactcaacc 19906247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 32082091 - 32082189
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||| | |||||||||| || ||| ||||||| |||| |||||||| |||| || ||| |||||||||||||    
T  32082091 tgttttatcctggaggcggcgtggttgatagt-tgccttgcacaattttggacagtgccatgaaatgtcttaaaaagagtgatctggtcgtgactcaacc 32082189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 47574720 - 47574621
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||  ||||||| ||| || | |  ||||||||| || || ||||| || ||||||||||||||||||||||||||| |||||||||||    
T  47574720 tgttttatcctggatgcggcgtgattgatattttgtcttgcacaattttgggtagtgtcaagaaacgtcttaaagagagcgacctgattgtgactcaacc 47574621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 48276649 - 48276743
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggat-agtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| ||||     |||||||| || ||  ||||| || ||||||||||||||||||||||||||||||| ||||||    
T  48276649 tgttttatcctggaggcggcgtggttgatagt-----ttgcacaattttgaacagtgcaacaaaacgtcttaaagagagcgacctgatcgtgattcaacc 48276743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 30564412 - 30564498
Alignment:
Q  22 gctgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacct 107  Q
    ||||||||||||| ||| ||||    ||||||||||||||||||||| || || ||||||| |||||||||||| ||||||||||||    
T  30564412 gctgttttatcctcgaggcggcacaattgttagtctaccttgcacaaatttgggtagtgccgcgaaacgtcttacagagagcgacct 30564498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 122
Target Start/End: Original strand, 13065786 - 13065867
Alignment:
Q  42 gcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||| |||||| |||| |||||||| ||  ||||||| |||||||||||||||||||||| |  |||||||||||||    
T  13065786 gcgtggttgatagtctccctttcacaactttgggcagtgccatgaaacgtcttaaagagagcgacatagtcgtgactcaacc 13065867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 16595934 - 16596017
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacct 107  Q
    ||||||||||||| |||| ||||||||  ||||| | |||||||| || ||| |||||||| |||||||||||||||||||||||    
T  16595934 tgttttatcctggggacgtcgtggttgacagtctgc-ttgcacaattttggacagtgccacaaaacgtcttaaagagagcgacct 16596017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 124
Target Start/End: Complemental strand, 7715185 - 7715134
Alignment:
Q  73 gatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacccg 124  Q
    |||||||||  |||||||||||||||||| ||| ||||||||||||||||||    
T  7715185 gatagtgccgtgaaacgtcttaaagagagtgacatgatcgtgactcaacccg 7715134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 122
Target Start/End: Complemental strand, 51697069 - 51696998
Alignment:
Q  52 tagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    |||||| |||||||||| || ||  ||||||| |||||||||||| |||||||||||| |||||||||||||    
T  51697069 tagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaggagagcgacctggtcgtgactcaacc 51696998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 122
Target Start/End: Complemental strand, 13059452 - 13059406
Alignment:
Q  76 agtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||||||||||||||||| ||| || ||||||||||    
T  13059452 agtgccacgaaacgtcttaaagagagcgatctggtcatgactcaacc 13059406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 33722914 - 33723003
Alignment:
Q  18 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacct 107  Q
    ||||||||||||||||||| |||| |||||| | | |||| | |||||||| || ||| |||| ||||||||||||||||||||| |||||    
T  33722914 ctgggctgttttatcctggggacgtcgtggtcgatggtctgc-ttgcacaattttggacagtgtcacgaaacgtcttaaagagagtgacct 33723003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 16953180 - 16953107
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccacgaaacgtcttaaa 96  Q
    ||||||||||||||| ||  ||||||| |||||| ||||||||||  |||| |||| |||||||||||||||||    
T  16953180 tgttttatcctggaggcgttgtggttgatagtctgccttgcacaattttgggtagtaccacgaaacgtcttaaa 16953107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 1151345 - 1151397
Alignment:
Q  70 ttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    |||||||||| || |||||||||||||||||| || ||||||| |||||||||    
T  1151345 ttggatagtgtcatgaaacgtcttaaagagagtgatctgatcgcgactcaacc 1151397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 17359633 - 17359526
Alignment:
Q  18 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgac 116  Q
    ||||| ||||| |||||||||  ||||  ||||||||||||||||| || |||| || |||||||  ||||||||||||||| |||     |||||||||    
T  17359633 ctgggttgtttaatcctggaggtggcgcagttgttagtctaccttgaacaaactcgggtagtgccgggaaacgtcttaaagaaagc-----gatcgtgac 17359539  T
Q  117 tcaacccgataat 129  Q
    |||||||| ||||    
T  17359538 tcaacccggtaat 17359526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 20513201 - 20513118
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggat-agtgccacgaaacgtcttaaagagagcgacct 107  Q
    |||||||||||||  ||| |||||||| |||||| | |||||||| || ||  ||||||||||||| ||||||||||||||||||    
T  20513201 tgttttatcctgggaacgtcgtggttgatagtctgc-ttgcacaattttgagcagtgccacgaaacatcttaaagagagcgacct 20513118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 19106714 - 19106615
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    |||||||| |||||| || |||||||| |||||  |||||||||| || ||  ||||| | ||||||||||||||| ||||| ||| | |||||||||||    
T  19106714 tgttttattctggaggcgacgtggttgatagtcagccttgcacaattttgggcagtgctatgaaacgtcttaaagaaagcgatctgcttgtgactcaacc 19106615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 108
Target Start/End: Original strand, 31298407 - 31298469
Alignment:
Q  47 gttgttagtctaccttgcac-aacttggatagtgccacgaaacgtcttaaagagagcgacctg 108  Q
    |||||||||||||||||||| |||| |  ||||| || ||||||||||||||| |||||||||    
T  31298407 gttgttagtctaccttgcacaaactcgagtagtgtcatgaaacgtcttaaagaaagcgacctg 31298469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 31099312 - 31099267
Alignment:
Q  84 gaaacgtcttaaagagagcgacctgatcgtgactcaacccgataat 129  Q
    |||||||||| ||||||||||| || ||||||| ||||||||||||    
T  31099312 gaaacgtcttgaagagagcgacttggtcgtgacccaacccgataat 31099267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 122
Target Start/End: Original strand, 32221163 - 32221196
Alignment:
Q  89 gtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    |||||||||||||||||||| |||||||||||||    
T  32221163 gtcttaaagagagcgacctggtcgtgactcaacc 32221196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 52691117 - 52691154
Alignment:
Q  85 aaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  52691117 aaacgtcttaaagagagcgatatgatcgtgactcaacc 52691154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 110; Significance: 2e-55; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 15 - 144
Target Start/End: Original strand, 33616718 - 33616847
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  33616718 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtg 33616817  T
Q  115 actcaacccgataattcctttggcagtatt 144  Q
    |||||| |||||||||| ||||||||||||    
T  33616818 actcaatccgataattcttttggcagtatt 33616847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 19430118 - 19429991
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  19430118 gatctgggctgttttatcctagagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtg 19430019  T
Q  115 actcaacccgataattcctttggcagta 142  Q
    |||||||||| |||||||||||||||||    
T  19430018 actcaacccggtaattcctttggcagta 19429991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 19435620 - 19435493
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  19435620 gatctgggctgttttatcctagagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtg 19435521  T
Q  115 actcaacccgataattcctttggcagta 142  Q
    |||||||||| |||||||||||||||||    
T  19435520 actcaacccggtaattcctttggcagta 19435493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 19566267 - 19566140
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  19566267 gatctgggctgttttatcctagagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtg 19566168  T
Q  115 actcaacccgataattcctttggcagta 142  Q
    |||||||||| |||||||||||||||||    
T  19566167 actcaacccggtaattcctttggcagta 19566140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 19571769 - 19571642
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  19571769 gatctgggctgttttatcctagagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtg 19571670  T
Q  115 actcaacccgataattcctttggcagta 142  Q
    |||||||||| |||||||||||||||||    
T  19571669 actcaacccggtaattcctttggcagta 19571642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 15 - 144
Target Start/End: Complemental strand, 31030632 - 31030503
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||| | |||||||||||||||||||||||||| |||||    
T  31030632 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcataatttgggtagtgtcgcgaaacgtcttaaagagagcgacctggtcgtg 31030533  T
Q  115 actcaacccgataattcctttggcagtatt 144  Q
    |||||||||||||||||||||| |||||||    
T  31030532 actcaacccgataattcctttgacagtatt 31030503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 32015803 - 32015690
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  | |||||||||||||||||||||||||||||||||| ||||||    
T  32015803 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccacgaaacgtcttaaagagagcgacctggtcgtga 32015704  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  32015703 ctcatcccggtaat 32015690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 42514368 - 42514479
Alignment:
Q  18 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgact 117  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||| |||||||||||||||| ||||||||| || |||||    
T  42514368 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcatgact 42514467  T
Q  118 caacccgataat 129  Q
    || |||| ||||    
T  42514468 caccccggtaat 42514479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 17955781 - 17955894
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || | ||||||| |||||||||||||| | ||||||||| ||||||    
T  17955781 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtcgtga 17955880  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  17955881 ctcaccccggtaat 17955894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 21644073 - 21644186
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||| | ||||||| |||||||||||||||| ||||||||| ||||||    
T  21644073 atctgggctgttttatcctggagtcggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 21644172  T
Q  116 ctcaacccgataat 129  Q
     ||| |||| ||||    
T  21644173 ttcaccccggtaat 21644186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 43999222 - 43999329
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||||||||| || | ||||||| |||||||| ||||||| | ||||||||||||||    
T  43999222 atctgggctgttttatcctggagacggcgcagttgctagtctaccttgcacaatttaggtagtgccgcgaaacgttttaaagaaaacgacctgatcgtga 43999321  T
Q  116 ctcaaccc 123  Q
    ||||||||    
T  43999322 ctcaaccc 43999329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 23 - 142
Target Start/End: Complemental strand, 13584454 - 13584328
Alignment:
Q  23 ctgttttatcctggagacggcgtggttgttagtctaccttgcacaac--------ttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||        |||| ||||||| |||||||||||||||||||||||||| |||||    
T  13584454 ctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtg 13584355  T
Q  115 actcaacccgataattcctttggcagta 142  Q
    | |||||| | ||||| |||||||||||    
T  13584354 attcaacctggtaatt-ctttggcagta 13584328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 24884816 - 24884702
Alignment:
Q  16 atctgggctgtttt-atcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| | ||||||| | |||||||||||||| ||| ||||| |||||    
T  24884816 atctgggctgtttttatcctggagacggcgtggttgctagtctaccttgcacaacttaggtagtgccgcaaaacgtcttaaagaaagctacctggtcgtg 24884717  T
Q  115 actcaacccgataat 129  Q
    ||||| |||| ||||    
T  24884716 actcaccccggtaat 24884702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 31449866 - 31449965
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| ||||||  ||||||||| || ||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  31449866 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 31449965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 38182237 - 38182336
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| || ||| |||||||||| |||||  ||||||||||||||| ||||||||||||||||| |||||||||||||    
T  38182237 tgttttatcctggaggcggcgtggttgataatctgccttgcacaatcttgggaagtgccacgaaacgttttaaagagagcgacctggtcgtgactcaacc 38182336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 44925923 - 44926022
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||  ||||||||||||||| ||||||||||||||||| |||||||||||||    
T  44925923 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgttttaaagagagcgacctggtcgtgactcaacc 44926022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 1910969 - 1911068
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgga-tagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    |||||||| |||||| | ||||||||| |||||| | |||||||| || || ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1910969 tgttttatactggaggcagcgtggttgatagtctgctttgcacaattttgactagtgccacgaaacgtcttaaagagagcgacctgatcgtgacttaacc 1911068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 19166729 - 19166630
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| || ||||||| || ||  |||||||||||||||||||||||||||||| || |||||||||||||    
T  19166729 tgttttatcctggaggcggcgtggttgatagtctgccgtgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacatggtcgtgactcaacc 19166630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 40125885 - 40125984
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||| ||||| ||||||||||| |||||| |||||||||| || ||  ||||||||||||||||||||||||||||| ||| |||||||||||||    
T  40125885 tgttttatcttggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgatctggtcgtgactcaacc 40125984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 119
Target Start/End: Original strand, 43302718 - 43302815
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa--cttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactca 119  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||   ||||| ||||||||||||||||||||||||| ||||| | |||| |||||    
T  43302718 tgttttatcctggaggcggcgtggttgatagtctaccttgcacaatttttggacagtgccacgaaacgtcttaaagagaacgaccgggtcgtaactca 43302815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 24 - 120
Target Start/End: Original strand, 15875668 - 15875765
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaa 120  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||||  ||||  |||||||||||||||| |||||||||||||||| |||| ||||||    
T  15875668 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcctaaagagagcgacctggtcgtaactcaa 15875765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 17026030 - 17025931
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaac-ttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| || |||| ||| ||||||  |||||||||  ||||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  17026030 tgttttatcctggaggcgacgtgattgatagtctgtcttgcacaatgttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 17025931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 17556522 - 17556423
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaac-ttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| || |||| ||| ||||||  |||||||||  ||||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  17556522 tgttttatcctggaggcgacgtgattgatagtctgtcttgcacaatgttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 17556423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 18876367 - 18876465
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| ||||||  |||||||||  ||||  ||||||||||||||||||||| ||||||||||| |||||||||||||    
T  18876367 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaa-agagcgacctggtcgtgactcaacc 18876465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 24090722 - 24090623
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||| ||||| || |||| ||| || ||| ||||||||||||| ||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  24090722 tgttttatcttggaggcgacgtgattgatattctgccttgcacaactttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 24090623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 33416642 - 33416543
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||| ||||| ||||||||||| ||||||  ||||||||| || ||  ||||||||||||||||||||||||| ||||||| |||||||||||||    
T  33416642 tgttttatcttggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagaccgacctggtcgtgactcaacc 33416543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 122
Target Start/End: Complemental strand, 1807565 - 1807468
Alignment:
Q  26 ttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||| ||| ||||||||||| |||||| |||||||||| || ||  |||| |||||||||||||||||||||||||||  |||||||||||||    
T  1807565 ttttatcctagaggcggcgtggttgatagtctgccttgcacaattttgggcagtgtcacgaaacgtcttaaagagagcgacctagtcgtgactcaacc 1807468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 122
Target Start/End: Original strand, 28559656 - 28559753
Alignment:
Q  26 ttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    |||||||||| |||||||||||||| |||| | |||||||||| || ||| ||||||||||||||||||| |||||||||| |  |||||||||||||    
T  28559656 ttttatcctgcagacggcgtggttgatagtttgccttgcacaattttggacagtgccacgaaacgtcttatagagagcgacattgtcgtgactcaacc 28559753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 34118561 - 34118462
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    |||||||||||  || || |||||||| |||||| |||||||||| || ||  ||||||| ||||||||||||||||||||||||| |||||||||||||    
T  34118561 tgttttatcctaaaggcgacgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacc 34118462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 36683674 - 36683575
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| | ||||||||| |||||| |||| ||||| || ||  ||||||||||||||||||||||||||||||||  || ||||||||||    
T  36683674 tgttttatcctggaggcagcgtggttgatagtctgccttacacaattttgggcagtgccacgaaacgtcttaaagagagcgacctagtcatgactcaacc 36683575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 122
Target Start/End: Original strand, 40130739 - 40130785
Alignment:
Q  76 agtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  40130739 agtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 40130785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 17953873 - 17953972
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||| ||||| ||||||||||| || |||  ||||||||| || ||  ||||||||||||||||||||||| |||||| || |||| ||||||||    
T  17953873 tgttttatcttggaggcggcgtggttgatattctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagaaagcgacatggtcgttactcaacc 17953972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 23548632 - 23548731
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgg-atagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||| ||| || |||||||| |||||  |||||||||| ||   | ||||||||||||||||||| ||||||||||| | |||||||||||||    
T  23548632 tgttttatcctagaggcgacgtggttgatagtccgccttgcacaattttacacagtgccacgaaacgtcttatagagagcgaccaggtcgtgactcaacc 23548731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 122
Target Start/End: Original strand, 4238337 - 4238414
Alignment:
Q  46 ggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||| |||||| |||||||||| || ||  ||||||| ||||||| ||||||||||||||||| |||||||||||||    
T  4238337 ggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtgttaaagagagcgacctggtcgtgactcaacc 4238414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 122
Target Start/End: Original strand, 4243076 - 4243153
Alignment:
Q  46 ggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||| |||||| |||||||||| || ||  ||||||| ||||||| ||||||||||||||||| |||||||||||||    
T  4243076 ggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtgttaaagagagcgacctggtcgtgactcaacc 4243153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 119
Target Start/End: Complemental strand, 2965725 - 2965629
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttg-gatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactca 119  Q
    ||||||||||| ||| ||| ||||||| |||| |  ||||||||| ||  |  ||||||||||||||| ||||||||||||||||| ||||||||||    
T  2965725 tgttttatcctagaggcggtgtggttgatagtgtgtcttgcacaattttaggcagtgccacgaaacgttttaaagagagcgacctggtcgtgactca 2965629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 29220359 - 29220283
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggat-agtgccacgaaacgtcttaaagag 99  Q
    ||||||||||| ||| | ||||||||| ||||||||||||||||| || ||| |||| ||| |||||||||||||||    
T  29220359 tgttttatccttgaggcagcgtggttgatagtctaccttgcacaattttgatcagtgacacaaaacgtcttaaagag 29220283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 4544245 - 4544334
Alignment:
Q  18 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggat-agtgccacgaaacgtcttaaagagagcgacct 107  Q
    |||| |||||||||||| | ||||  ||||||| |||||||| |||||||| || ||  ||||||| ||||||||||||||||||||||||    
T  4544245 ctggactgttttatcctagggacgtagtggttgatagtctac-ttgcacaattttgagcagtgccatgaaacgtcttaaagagagcgacct 4544334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 34517335 - 34517263
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaag 97  Q
    ||||||||| ||| | || |||||||| |||||| |||||||||| || || ||||||||||||||||||||||    
T  34517335 tgttttatcttgggggcgtcgtggttgatagtct-ccttgcacaattttgacagtgccacgaaacgtcttaaag 34517263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 2470069 - 2469986
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggat-agtgccacgaaacgtcttaaagagagcgacct 107  Q
    ||||||||||||| |||| ||| |||| |||||| | |||||||| || ||  |||||||| |||||||||||||||||||||||    
T  2470069 tgttttatcctggggacgtcgtagttgatagtctgc-ttgcacaattttgagcagtgccacaaaacgtcttaaagagagcgacct 2469986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 120
Target Start/End: Original strand, 15951584 - 15951618
Alignment:
Q  86 aacgtcttaaagagagcgacctgatcgtgactcaa 120  Q
    ||||||||||||||||||||||| |||||||||||    
T  15951584 aacgtcttaaagagagcgacctggtcgtgactcaa 15951618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 28564826 - 28564920
Alignment:
Q  29 tatcctggagacggcgtggttgttagtctaccttgcacaacttggat-agtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||| |||||||||||||  ||||||  |||| |||| || ||  |||| || |||| || ||| |||||||||||||||||||||||||||    
T  28564826 tatcctgcagacggcgtggttaatagtctgtcttgaacaattttgagcagtgtcatgaaatgttttatagagagcgacctgatcgtgactcaacc 28564920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 28572449 - 28572543
Alignment:
Q  29 tatcctggagacggcgtggttgttagtctaccttgcacaacttggat-agtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||| |||||||||||||  ||||||  |||| |||| || ||  |||| || |||| || ||| |||||||||||||||||||||||||||    
T  28572449 tatcctgcagacggcgtggttaatagtctgtcttgaacaattttgagcagtgtcatgaaatgttttatagagagcgacctgatcgtgactcaacc 28572543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 32010582 - 32010528
Alignment:
Q  75 tagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacccgataat 129  Q
    ||||||| ||||| |||||||| ||||||||||| |||||||||| |||| ||||    
T  32010582 tagtgccgcgaaatgtcttaaaaagagcgacctggtcgtgactcatcccggtaat 32010528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 37771785 - 37771707
Alignment:
Q  46 ggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaaccc 123  Q
    ||||||||||||||||| ||||| || || |||||||  ||   |||||||||| ||||||||| ||||||||||||||    
T  37771785 ggttgttagtctacctttcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgactcaaccc 37771707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 42157872 - 42157971
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    |||||||||||||||||||| || ||| || ||||  ||| ||||  |||||||||||| | ||| |||||||||| || ||| || |||||||||||||    
T  42157872 tgttttatcctggagacggcatgattgataatcta-tttgtacaattttggatagtgccgcaaaatgtcttaaagatagtgacttggtcgtgactcaacc 42157970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 104; Significance: 8e-52; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 24528458 - 24528331
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| | |||||||||||||||||||||||| |||||    
T  24528458 gatctgagctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtaatgccgcaaaacgtcttaaagagagcgacctggtcgtg 24528359  T
Q  115 actcaacccgataattcctttggcagta 142  Q
    ||||||||||||||||||||||||||||    
T  24528358 actcaacccgataattcctttggcagta 24528331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 15 - 152
Target Start/End: Complemental strand, 9973566 - 9973429
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||    
T  9973566 gatctgggttgttttatcctggagacggcgtggttgttcgtctaccttgcacaacttggatagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 9973467  T
Q  115 actcaacccgataattcctttggcagtatttctgattt 152  Q
    |||||||||| ||||||||||| || || |||||||||    
T  9973466 actcaacccggtaattcctttgacaatacttctgattt 9973429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 28292495 - 28292620
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||    
T  28292495 gatctgggctgttt-atcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccgcgaaacgtcttaaa-agagcgacctggtcgtg 28292592  T
Q  115 actcaacccgataattcctttggcagta 142  Q
    ||| |||||| |||||||||||||||||    
T  28292593 acttaacccggtaattcctttggcagta 28292620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 33226518 - 33226393
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||| | ||||||| |||||||||||||||||||||||||| |||||    
T  33226518 gatctgagctgttttatcctggtgacggcgtggttgttagtctaccttgcataacttaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtg 33226419  T
Q  115 actcaacccgataattcctttggcag 140  Q
    ||| ||| ||||||||||||||||||    
T  33226418 acttaacgcgataattcctttggcag 33226393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 16539404 - 16539517
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||| |||||||||||||||| ||||||||| ||||||    
T  16539404 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 16539503  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  16539504 ctcaccccggtaat 16539517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 16626258 - 16626145
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||| |||||||||||||||| ||||||||| ||||||    
T  16626258 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 16626159  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  16626158 ctcaccccggtaat 16626145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 42572048 - 42571935
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||| |||||||||||||||| ||||||||| ||||||    
T  42572048 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 42571949  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  42571948 ctcaccccggtaat 42571935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 33238105 - 33237992
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  | ||||||| |||||||||||||||||||||||||| ||||||    
T  33238105 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 33238006  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  33238005 ctcatcccggtaat 33237992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 47999078 - 47998965
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  | ||||||| |||||||||||||||||||||||||| ||||||    
T  47999078 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 47998979  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  47998978 ctcatcccggtaat 47998965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 47177111 - 47177225
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||| |||||||||||||| |||||||| ||||| |||||||||||||||||||| | ||||||| |||||||||||||||| ||||||||| ||||||    
T  47177111 atctgagctgttttatcctgaagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 47177210  T
Q  116 ctcaacccgataatt 130  Q
    |||| |||| |||||    
T  47177211 ctcaccccggtaatt 47177225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 2234622 - 2234735
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || | ||||||| |||||||||||||||| ||| ||||| ||||||    
T  2234622 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcaacctggtcgtga 2234721  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  2234722 ctcaccccggtaat 2234735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 32212646 - 32212759
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||||||||||||| || | ||||||| |||||||||||||||| ||||||||| ||||||    
T  32212646 atctgggctgttttatcctggagacagcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 32212745  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  32212746 ctcaccccggtaat 32212759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 33243282 - 33243169
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  | ||||||| ||||||||||||||||||| |||||| ||||||    
T  33243282 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagtgacctggtcgtga 33243183  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  33243182 ctcatcccggtaat 33243169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 47993903 - 47993790
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  | ||||||| |||||||||||||||||||||||||| | ||||    
T  47993903 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggttgtga 47993804  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  47993803 ctcatcccggtaat 47993790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 12934500 - 12934397
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||  | ||||||| ||||| |||||||||| ||||||||| ||||||    
T  12934500 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaactcaggtagtgccgcgaaatgtcttaaagaaagcgacctggtcgtga 12934401  T
Q  116 ctca 119  Q
    ||||    
T  12934400 ctca 12934397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 17495506 - 17495403
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||| | ||||||| |||||||||||||| | ||||||||| ||||||    
T  17495506 atctgggctgttttatcttggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtcgtga 17495407  T
Q  116 ctca 119  Q
    ||||    
T  17495406 ctca 17495403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 17557708 - 17557811
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||| | ||||||| |||||||||||||| | ||||||||| ||||||    
T  17557708 atctgggctgttttatcttggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtcgtga 17557807  T
Q  116 ctca 119  Q
    ||||    
T  17557808 ctca 17557811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 43892961 - 43892847
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||| | |||||||  ||||||||||||||| ||||||||| ||||||    
T  43892961 atctgagctgttttatcctggagacggcgcggttgctagtttaccttgcacaacttaggtagtgccgtgaaacgtcttaaagaaagcgacctggtcgtga 43892862  T
Q  116 ctcaacccgataatt 130  Q
    |||| |||| |||||    
T  43892861 ctcaccccggtaatt 43892847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 19309603 - 19309695
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctg 108  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | | ||||| |||||||||||||||| |||||||||    
T  19309603 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtggtgccgcgaaacgtcttaaagacagcgacctg 19309695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 4579603 - 4579504
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  4579603 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 4579504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 21081031 - 21081146
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttg--cacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgt 113  Q
    ||||||||||||||||||||||||||| | ||||| ||||||||||||  ||||| || | ||||||| |||||||||||||||| ||||||||| ||||    
T  21081031 atctgggctgttttatcctggagacggtgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgt 21081130  T
Q  114 gactcaacccgataat 129  Q
    |||||| |||| ||||    
T  21081131 gactcaccccggtaat 21081146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 9650967 - 9651066
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| ||||||  ||||||||| || ||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  9650967 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 9651066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 26341294 - 26341195
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||  |||||||||||| |||||||||||||||||||| |||||||||||||    
T  26341294 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtcttaaagagagcgacctggtcgtgactcaacc 26341195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 23866163 - 23866065
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaac 121  Q
    ||||||||||||||| ||||||||||| ||||||  ||||||||| || ||  ||||||||||||||||||||||||||||||||| ||||||||||||    
T  23866163 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 23866065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 52 - 129
Target Start/End: Original strand, 22857715 - 22857792
Alignment:
Q  52 tagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacccgataat 129  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||| |||| ||||    
T  22857715 tagtctaccttgcacaacttagatagtgccgcgaaacgtcttaaagaaagcgacctgatcgtgactcaccccggtaat 22857792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 120
Target Start/End: Original strand, 23246933 - 23247030
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaa 120  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||  ||||||||||||| ||||||||||||||||||| |||||||||||    
T  23246933 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacatcttaaagagagcgacctggtcgtgactcaa 23247030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 44423137 - 44423236
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggat-agtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| |||||| |||| |||||| ||||| |||| || | | ||||||||||||||||||||||||||||| |||||||||||||||||    
T  44423137 tgttttatcctggaggcggcgtagttgatagtctgccttgaacaattttggtcagtgccacgaaacgtcttaaagagagcgatctgatcgtgactcaacc 44423236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 26 - 122
Target Start/End: Original strand, 3357634 - 3357731
Alignment:
Q  26 ttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||| ||||||||||||||||| |||||| ||||||||||||| ||   || || |||||||||||||||||||||||||| |||||||||||||    
T  3357634 ttttatcatggagacggcgtggttgatagtctgccttgcacaactttgggctgtaccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 3357731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 8076145 - 8076045
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttg-gatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| | ||||||||| ||||||  ||||||||| ||  |  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  8076145 tgttttatcctggaggcagcgtggttgatagtctgtcttgcacaattttaggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 8076046  T
Q  123 c 123  Q
    |    
T  8076045 c 8076045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 4930328 - 4930229
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||| |  ||| ||||| || ||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  4930328 tgttttatcctggaggcggcgtggttgatagtatgacttacacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 4930229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 13314236 - 13314335
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| || ||||| || ||||||||||||||||| || ||  ||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  13314236 tgttttatcctggaggcgacgtggctgatagtctaccttgcacaattttgggcagtaccacgaaacgtcttaaagagagcgatctggtcgtgactcaacc 13314335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 44510677 - 44510776
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| ||||||  ||||||||| || ||| |||||||| |||||||||||||||||| | ||| |||||||||||||    
T  44510677 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttggacagtgccacaaaacgtcttaaagagagcaatctggtcgtgactcaacc 44510776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 10388367 - 10388464
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| |||||| |||| | ||||| | ||||||||||||  | |||||| |||||||||||||||||||||||| |||||||||||||    
T  10388367 tgttttatcctggaggcggcgttgttgat-gtctatcatgcacaacttgggcaatgccacaaaacgtcttaaagagagcgacctggtcgtgactcaacc 10388464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 120
Target Start/End: Complemental strand, 8268388 - 8268291
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaa 120  Q
    ||||||||| |||||  |||||||||| ||||||  ||||||||| || ||| |||||||| |||||||||||||||||||||||| |||||||||||    
T  8268388 tgttttatcatggaggtggcgtggttgatagtctgtcttgcacaattttggacagtgccacaaaacgtcttaaagagagcgacctggtcgtgactcaa 8268291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 12254174 - 12254075
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttg-gatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    |||||||||||| || ||||||| ||| |||||| |||||||||||||  |  |||||||| |||| ||||||||||||||||||| ||| |||||||||    
T  12254174 tgttttatcctgtaggcggcgtgattgatagtctgccttgcacaactttaggcagtgccacaaaacatcttaaagagagcgacctggtcgcgactcaacc 12254075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 27238337 - 27238238
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggat-agtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||| || || ||||||| ||| |||||| |||| ||||| || ||  |||||||| |||||||||||||||||||||||| |||||||||||||    
T  27238337 tgttttatcttgcaggcggcgtgattgatagtctgccttacacaattttgagcagtgccacaaaacgtcttaaagagagcgacctggtcgtgactcaacc 27238238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 122
Target Start/End: Original strand, 42627214 - 42627296
Alignment:
Q  41 ggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    |||||||||| |||||| | |||||||| || || | |||||||||||||||||||||||||||||||| |||||| ||||||    
T  42627214 ggcgtggttgatagtctgctttgcacaattttgggttgtgccacgaaacgtcttaaagagagcgacctggtcgtgaatcaacc 42627296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 26 - 120
Target Start/End: Complemental strand, 3880091 - 3879995
Alignment:
Q  26 ttttatcctggagacggcgtggttgttagtctaccttgcacaactt--ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaa 120  Q
    ||||||||||||| ||||||||||| |||||| |||| ||||| ||  | | |||| ||| |||||||||||||| || ||||||||||||||||||    
T  3880091 ttttatcctggaggcggcgtggttgatagtcttccttacacaaattttgaacagtgtcacaaaacgtcttaaagaaagtgacctgatcgtgactcaa 3879995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 25543362 - 25543461
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttg-gatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||  ||||||| |||| || ||||||||| ||  |  ||| |||||||||||||||||||| |||||||||| |||||||||||    
T  25543362 tgttttatcctggaggcgatgtggttgatagtttatcttgcacaattttaggcagtaccacgaaacgtcttaaagagtgcgacctgattgtgactcaacc 25543461  T

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Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 27256343 - 27256237
Alignment:
Q  18 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgac 116  Q
    ||||||||||||||||||||| |  |  ||||||||||||||||||||||| || || |||||||  ||   |||||||||| ||||||||| |||||||    
T  27256343 ctgggctgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgac 27256245  T
Q  117 tcaacccg 124  Q
    ||||||||    
T  27256244 tcaacccg 27256237  T

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Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 122
Target Start/End: Complemental strand, 29151027 - 29150930
Alignment:
Q  26 ttttatcctggagacggcgtggttgttagtctaccttgcacaacttggat-agtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||| ||||| || |||||||| |||| | |||||||||| || ||  |||| |||||||||||||||| ||||||| ||| |||||||||||||    
T  29151027 ttttatcttggaggcgacgtggttgatagtttgccttgcacaattttgagcagtgtcacgaaacgtcttaaaaagagcgatctggtcgtgactcaacc 29150930  T

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Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 122
Target Start/End: Complemental strand, 16372441 - 16372394
Alignment:
Q  75 tagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    |||||||||||||| |||||||||||||||| || |||||||||||||    
T  16372441 tagtgccacgaaacatcttaaagagagcgacttggtcgtgactcaacc 16372394  T

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Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 116
Target Start/End: Complemental strand, 15642282 - 15642236
Alignment:
Q  70 ttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgac 116  Q
    |||||||||| || ||||||||||||| |||||||||||||||||||    
T  15642282 ttggatagtgtcatgaaacgtcttaaaaagagcgacctgatcgtgac 15642236  T

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Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 122
Target Start/End: Complemental strand, 19640395 - 19640295
Alignment:
Q  22 gctgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaa 120  Q
    ||||||||||||||||| || |  |||| |||||||||||||||||| || || || || |  ||||||||||||||| || ||| ||||||||||||||    
T  19640395 gctgttttatcctggaggcg-cacggttcttagtctaccttgcacaaactcgggtaatgtcgtgaaacgtcttaaagaaagagacatgatcgtgactcaa 19640297  T
Q  121 cc 122  Q
    ||    
T  19640296 cc 19640295  T

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Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 47761069 - 47760983
Alignment:
Q  40 cggcgtggttgttagtctaccttgcac-aacttggatagtgccacgaaacg----tcttaaagagagcgacctgatcgtgactcaac 121  Q
    |||||||||||||||||||| || ||| ||||||| ||||||  ||| |||    |||||||||||||| |||||||||||||||||    
T  47761069 cggcgtggttgttagtctacattacacaaacttgggtagtgctgcgagacgtacatcttaaagagagcggcctgatcgtgactcaac 47760983  T

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Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 6590983 - 6591054
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccacgaaacgtctta 94  Q
    |||||||||||| || ||||||||||| |||||| ||||||||||  || || |||||||| ||||||||||    
T  6590983 tgttttatcctgaaggcggcgtggttgatagtctgccttgcacaattttagacagtgccacaaaacgtctta 6591054  T

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Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 9008258 - 9008159
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgga-tagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| |  | || ||| ||| || |||||||||| || || ||||| ||| ||||||||||||||||| ||| || |||||||||||||    
T  9008258 tgttttatcctggaggcttcatgattgatagcctgccttgcacaattttgagtagtgtcactaaacgtcttaaagagagggacatggtcgtgactcaacc 9008159  T

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Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 13142901 - 13142973
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgga-tagtgccacgaaacgtcttaa 95  Q
    ||||||||||||| | |||||| ||||  |||||  | |||||||||| || |||||||||||||||||||||    
T  13142901 tgttttatcctggtggcggcgttgttgaaagtctgtcatgcacaactttgactagtgccacgaaacgtcttaa 13142973  T

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Target: chr5 (Bit Score: 97; Significance: 1e-47; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 7805175 - 7805063
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||| |||||    
T  7805175 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagggacctggtcgtg 7805076  T
Q  115 actcaacccgata 127  Q
    |||||||||||||    
T  7805075 actcaacccgata 7805063  T

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Target: chr5; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 15 - 124
Target Start/End: Complemental strand, 14374239 - 14374130
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  14374239 gatctgggctgttttatcctggagacggcgtggttgttagtctaccctgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtg 14374140  T
Q  115 actcaacccg 124  Q
    ||||||||||    
T  14374139 actcaacccg 14374130  T

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Target: chr5; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 15 - 124
Target Start/End: Original strand, 24435860 - 24435969
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  24435860 gatctgggctgttttatcctggagacggcgtggttgatagtctaccttgcacaacttggatagtgccgcgaaacgtcttaaagagagcgacctggtcgtg 24435959  T
Q  115 actcaacccg 124  Q
    ||||| ||||    
T  24435960 actcatcccg 24435969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 15 - 124
Target Start/End: Original strand, 13582681 - 13582790
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||| |||||    
T  13582681 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaaattgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtg 13582780  T
Q  115 actcaacccg 124  Q
    ||||| ||||    
T  13582781 actcatcccg 13582790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 17510161 - 17510048
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||| |||||||||||||||| ||||||||| ||||||    
T  17510161 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 17510062  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  17510061 ctcaccccggtaat 17510048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 41858696 - 41858593
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | |||||||  ||||||||||||||| ||||||||||||||||    
T  41858696 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgtgaaacgtcttaaagaaagcgacctgatcgtga 41858597  T
Q  116 ctca 119  Q
    ||||    
T  41858596 ctca 41858593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 24771349 - 24771462
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||| |||||| ||||||||| ||||||||| ||||||    
T  24771349 atctgggttgttttatcctggagacggcgcggttgttagtctaccttgcacaacttaggtagtgccgcgaaacatcttaaagaaagcgacctggtcgtga 24771448  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  24771449 ctcatcccggtaat 24771462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 36253929 - 36253816
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||| | ||||||| |||||||||||||||| ||||||||| ||||||    
T  36253929 atctgggctgttttatcctggaggcggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 36253830  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  36253829 ctcaccccggtaat 36253816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 42019676 - 42019563
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||  ||||| |||||||||||||||||||| | ||||||| |||||||||||||||| ||||||||| ||||||    
T  42019676 atctgggctgttttatcctggagacggcacggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 42019577  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  42019576 ctcaccccggtaat 42019563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 17505056 - 17504943
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    |||||||||||||||||||||||||| || ||||| |||||||||||||||||||| | ||||||| |||||||||||||||| | ||||||| ||||||    
T  17505056 atctgggctgttttatcctggagacgacgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaaacgacctggtcgtga 17504957  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  17504956 ctcaccccggtaat 17504943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 119
Target Start/End: Original strand, 1414051 - 1414146
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactca 119  Q
    ||||||||| ||||||||||| ||||| |||||||||||||||||||| | ||||||| |||||||||||||||| ||||||||||||||||||||    
T  1414051 tgttttatcttggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctgatcgtgactca 1414146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 7451853 - 7451754
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| | ||||||||| |||||| |||||||||| || ||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  7451853 tgttttatcctggaggcagcgtggttgatagtctgccttgcacaattttggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 7451754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 26667367 - 26667268
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  26667367 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 26667268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 26938964 - 26938865
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  26938964 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 26938865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 29167973 - 29168072
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  29167973 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 29168072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 24776804 - 24776910
Alignment:
Q  16 atctgggctgttttatcctggagacggcgt---ggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcg 112  Q
    |||||||||||||||||||||||||||||    ||||| |||||||||||||||||||| | ||||||| |||||||||||||||| |||||| || |||    
T  24776804 atctgggctgttttatcctggagacggcgccgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacatggtcg 24776903  T
Q  113 tgactca 119  Q
    |||||||    
T  24776904 tgactca 24776910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 556790 - 556691
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||  |||||||| |||||||||||||||||||||||| |||||||||||||    
T  556790 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctggtcgtgactcaacc 556691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 561562 - 561463
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||  |||||||| |||||||||||||||||||||||| |||||||||||||    
T  561562 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctggtcgtgactcaacc 561463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 12103120 - 12103021
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||  ||||||||||||||||||||||||||||||||| |||| ||||||||    
T  12103120 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtaactcaacc 12103021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 36937511 - 36937610
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||  ||||||| ||||||||||||||||||||||||| |||||||||||||    
T  36937511 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacc 36937610  T

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Target: chr5; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 36942265 - 36942364
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||  ||||||| ||||||||||||||||||||||||| |||||||||||||    
T  36942265 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacc 36942364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 37248795 - 37248894
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttg-gatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| ||  | ||||||||||||| |||||||||||||||||||| |||||||||||||    
T  37248795 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggtagtgccacgaaatgtcttaaagagagcgacctggtcgtgactcaacc 37248894  T

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Target: chr5; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 37652830 - 37652929
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    |||||||||||||||  |||||||||| |||||| |||||||||| || ||| | || ||||||||||||||||||||||||||||||||||||||||||    
T  37652830 tgttttatcctggaggtggcgtggttgatagtctgccttgcacaattttggacaatgtcacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 37652929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 41853651 - 41853548
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||| | ||||||||| ||||| |||||||| ||||||||||| | ||||| | |||||||||||||||| ||||||||| ||||||    
T  41853651 atctgggctgttttatcgtagagacggcgcggttgctagtctactttgcacaacttaggtagtgtcgcgaaacgtcttaaagaaagcgacctggtcgtga 41853552  T
Q  116 ctca 119  Q
    ||||    
T  41853551 ctca 41853548  T

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Target: chr5; HSP #25
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 26709207 - 26709092
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttg--cacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgt 113  Q
    |||||||||||||||||||||||| | || ||||| ||||||||||||  ||||| || | ||||||| |||||||||||||||| ||||||||| ||||    
T  26709207 atctgggctgttttatcctggagatgacgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgt 26709108  T
Q  114 gactcaacccgataat 129  Q
    |||||| |||| ||||    
T  26709107 gactcaccccggtaat 26709092  T

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Target: chr5; HSP #26
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 26978941 - 26978826
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttg--cacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgt 113  Q
    |||||||||||||||||||||||| | || ||||| ||||||||||||  ||||| || | ||||||| |||||||||||||||| ||||||||| ||||    
T  26978941 atctgggctgttttatcctggagatgacgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgt 26978842  T
Q  114 gactcaacccgataat 129  Q
    |||||| |||| ||||    
T  26978841 gactcaccccggtaat 26978826  T

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Target: chr5; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 6155419 - 6155518
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||| ||||||| ||||||  |||| | || || ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  6155419 tgttttatcctggaggcggtgtggttgatagtctgtcttgtaaaattttggacagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 6155518  T

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Target: chr5; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 39518505 - 39518406
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| || ||||||| || ||   |||||||||||||||||||||||||||||||| |||||||||||||    
T  39518505 tgttttatcctggaggcggcgtggttgatagtctgccatgcacaattttgggcggtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 39518406  T

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Target: chr5; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 39523144 - 39523045
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| ||||||  ||||||||| || ||   |||||||||||||||||||||||||||||||| |||||||||||||    
T  39523144 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcggtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 39523045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 42001529 - 42001430
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| ||||||  ||| ||||| || ||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  42001529 tgttttatcctggaggcggcgtggttgatagtctgtcttacacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 42001430  T

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Target: chr5; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 32461549 - 32461647
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaac 121  Q
    ||||||||||||||| ||||||||||| ||||||  ||||||||| || ||  |||||||| |||||||||||||||||||||||| ||||||||||||    
T  32461549 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctggtcgtgactcaac 32461647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 35679875 - 35679960
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccacgaaacgtcttaaagagagcgacctg 108  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||||  || || |||||||||||||||||||||||||||||||||    
T  35679875 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaatttttgacagtgccacgaaacgtcttaaagagagcgacctg 35679960  T

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Target: chr5; HSP #33
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 26 - 122
Target Start/End: Complemental strand, 40147988 - 40147891
Alignment:
Q  26 ttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||| ||||||||||| ||||||  ||||||||| || ||  ||||||||||||| |||||||||||||||||||||| ||||||||||    
T  40147988 ttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacatcttaaagagagcgacctgatcatgactcaacc 40147891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 6514601 - 6514700
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| ||||||| || || ||  |||||||||||||||||||||||||| ||| || |||||||||||||    
T  6514601 tgttttatcctggaggcggcgtggttgatagtctgccttgcaaaattttgggcagtgccacgaaacgtcttaaagagagtgacttggtcgtgactcaacc 6514700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 10759820 - 10759918
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||||  ||||  |||||||| |||||||||||| ||||||||||| |||||||||||||    
T  10759820 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtcttaaa-agagcgacctggtcgtgactcaacc 10759918  T

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Target: chr5; HSP #36
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 12045139 - 12045238
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||| | ||||||  ||||||||| || ||  |||||||||||||||||||||||| |||||||| |||||||||||||    
T  12045139 tgttttatcctggaggcggcgtggtcgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagggcgacctggtcgtgactcaacc 12045238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 12501899 - 12501998
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| ||||||   |||||||| || ||  ||||||||||||||||||||||||||||||||| || ||||||||||    
T  12501899 tgttttatcctggaggcggcgtggttgatagtctgttttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcatgactcaacc 12501998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 36423732 - 36423633
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    |||||||| |||||| ||||||||||| |||||| |||||||||| || ||  |||||| |||||||||||||||||||||||||| ||| |||||||||    
T  36423732 tgttttattctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccgcgaaacgtcttaaagagagcgacctggtcgcgactcaacc 36423633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 36428804 - 36428705
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||  ||| || | |||||||||||||||||||||||| |||||||||||||    
T  36428804 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagttccgcaaaacgtcttaaagagagcgacctggtcgtgactcaacc 36428705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 41996760 - 41996661
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| ||||||  ||| ||||| || ||  ||||||||||||||||||||||||||| ||||| |||||||||||||    
T  41996760 tgttttatcctggaggcggcgtggttgatagtctgtcttacacaattttgggcagtgccacgaaacgtcttaaagagagcaacctggtcgtgactcaacc 41996661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 120
Target Start/End: Original strand, 41587160 - 41587257
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggat-agtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaa 120  Q
    ||||||||||||||| ||||||||||| ||||||  ||||||||| || ||  |||| |||||||||||||||||||||| ||||| |||||||||||    
T  41587160 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgaacagtgtcacgaaacgtcttaaagagagcaacctggtcgtgactcaa 41587257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 3666027 - 3665928
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||| |||  |||||||||| |||||| |||||||||| || ||  |||||||||||||||||| |||||||||||||  |||||||||||||    
T  3666027 tgttttatcctagaggtggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttgaagagagcgacctagtcgtgactcaacc 3665928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 12102831 - 12102930
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||| ||||| ||||||| |||||| |||||||||| || ||  |||||||| ||| |||||||||||||||||||  |||||||||||||    
T  12102831 tgttttatcctggtgacggtgtggttgatagtcttccttgcacaattttggccagtgccacaaaaagtcttaaagagagcgacctagtcgtgactcaacc 12102930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 28857958 - 28857851
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttggatagtgccacgaaacgtctt-aaagagagcgacctgatcgtgactcaac 121  Q
    |||||||||||| || ||||||||||||| ||||||||||||| ||||  | ||||||| ||||||||||| ||||| |||||| || ||||||||||||    
T  28857958 tgttttatcctgtaggcggcgtggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 28857859  T
Q  122 ccgataat 129  Q
    ||| ||||    
T  28857858 ccggtaat 28857851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 31986822 - 31986716
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    |||||||||||| || |||||   |||||| ||||||||||| || || || ||||| | |||||||||||||||| |||||||| ||||||||||||||    
T  31986822 tgttttatcctgaaggcggcgcaattgttaatctaccttgcataaactcgggtagtgtcgcgaaacgtcttaaagaaagcgaccttatcgtgactcaacc 31986723  T
Q  123 cgataat 129  Q
    |||||||    
T  31986722 cgataat 31986716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 119
Target Start/End: Original strand, 12041932 - 12042028
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactca 119  Q
    ||||||||||||||| ||||||||||| |||| | ||||||| |  || ||  ||||||||||||||||||||||||| ||||||| ||||||||||    
T  12041932 tgttttatcctggaggcggcgtggttgatagtttgccttgcatatttttgggcagtgccacgaaacgtcttaaagagaacgacctggtcgtgactca 12042028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 20181063 - 20181162
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||| |||||  |||||||||  ||||||  |||||| || || ||| | |||||||||||||||||||||||| |||||| |||||||||||||    
T  20181063 tgttttatcatggaggtggcgtggttaatagtctgtcttgcataattttggacaatgccacgaaacgtcttaaagagagtgacctggtcgtgactcaacc 20181162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 21323960 - 21324066
Alignment:
Q  18 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgac 116  Q
    ||||||||||||||||||||| |  |  ||||||||||||||||||||||| || ||||||||||  ||   |||||||||| ||||||||| || ||||    
T  21323960 ctgggctgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcggatagtgccgtgatttgtcttaaagaaagcgacctggtcatgac 21324058  T
Q  117 tcaacccg 124  Q
    ||||||||    
T  21324059 tcaacccg 21324066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 31731644 - 31731538
Alignment:
Q  18 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgac 116  Q
    ||||||||||||||||||||| |  |  ||||||||||||||||||||||| || || |||||||  ||   |||||||||| ||||||||| |||||||    
T  31731644 ctgggctgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgccctgatttgtcttaaagaaagcgacctggtcgtgac 31731546  T
Q  117 tcaacccg 124  Q
    ||||||||    
T  31731545 tcaacccg 31731538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 13301482 - 13301584
Alignment:
Q  20 gggctgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactc 118  Q
    ||||||||||||||||||| |  |  ||||||||||||||||||||||| || || |||||||  ||   |||||||||| ||||||||| |||||||||    
T  13301482 gggctgttttatcctggaggca-cacggttgttagtctaccttgcacaattttgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgactc 13301580  T
Q  119 aacc 122  Q
    ||||    
T  13301581 aacc 13301584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 129
Target Start/End: Complemental strand, 9077085 - 9076979
Alignment:
Q  23 ctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||| |||||  |||||  |||||||||||| |||||| ||  | ||| || |||||| |||| | ||| ||| |||||||||||||||||||||    
T  9077085 ctgttttattctggaagcggcgcagttgttagtctatcttgcataaactcgatggtaccacgacacgtttgaaacagaacgacctgatcgtgactcaacc 9076986  T
Q  123 cgataat 129  Q
    | |||||    
T  9076985 caataat 9076979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 37550032 - 37550076
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa 68  Q
    |||||||||||||||  |||||||||| |||||| ||||||||||    
T  37550032 tgttttatcctggaggtggcgtggttgatagtctgccttgcacaa 37550076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 79; Significance: 7e-37; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 13732 - 13846
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||| |||||||||||||||| ||||||||| ||||||    
T  13732 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 13831  T
Q  116 ctcaacccgataatt 130  Q
    |||| |||| |||||    
T  13832 ctcaccccggtaatt 13846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 19187 - 19293
Alignment:
Q  16 atctgggctgttttatcctggagacggcgt---ggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcg 112  Q
    |||||||||||||||||||||||||||||    ||||| |||||||||||||||||||| | ||||||| |||||||||||||||| |||||| || |||    
T  19187 atctgggctgttttatcctggagacggcgccgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacatggtcg 19286  T
Q  113 tgactca 119  Q
    |||||||    
T  19287 tgactca 19293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 78; Significance: 3e-36; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 31648 - 31535
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||| |||||||||||||||| ||||||||| ||||||    
T  31648 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 31549  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  31548 ctcaccccggtaat 31535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 26473 - 26363
Alignment:
Q  19 tgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactc 118  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||| |  | ||||||| ||||||||||||||||||||||| ||||||| ||||    
T  26473 tgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacttgatcgtaactc 26374  T
Q  119 aacccgataat 129  Q
    | |||| ||||    
T  26373 atcccggtaat 26363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 9200 - 9313
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||| | ||||||| |||||||||||||||| ||||||||| ||||||    
T  9200 atctgggctgttttatcctggagacggcgcggttgctagtcttccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 9299  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  9300 ctcaccccggtaat 9313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 3666 - 3553
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||||||||||||| | ||||||| |||||||||||||||| ||||||||| ||||||    
T  3666 atctgggctgttttatcctggaaacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 3567  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  3566 ctcaccccggtaat 3553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 3161 - 3048
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  | ||||||| |||||||||||||||||||||||||| ||||||    
T  3161 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 3062  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  3061 ctcatcccggtaat 3048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 81374 - 81487
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  | ||||||| |||||||||||||||||||||||||| ||||||    
T  81374 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 81473  T
Q  116 ctcaacccgataat 129  Q
    |||| |||| ||||    
T  81474 ctcatcccggtaat 81487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 37113 - 37010
Alignment:
Q  16 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtga 115  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || | ||||||| |||||||||||||||| ||||||||| ||||||    
T  37113 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 37014  T
Q  116 ctca 119  Q
    ||||    
T  37013 ctca 37010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 124
Target Start/End: Original strand, 47878 - 47957
Alignment:
Q  46 ggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacccg 124  Q
    ||||||||||||||||||||||| || || |||||||  ||   |||||| ||| ||||||||| |||||||||||||||    
T  47878 ggttgttagtctaccttgcacaattttgggtagtgccctgatttgtcttatagaaagcgacctggtcgtgactcaacccg 47957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 7199 - 7100
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  7199 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 7100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 9887 - 9986
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  9887 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 9986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 4169 - 4070
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||  |||||||||||| |||||||||||||||||||| |||||||||||||    
T  4169 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtcttaaagagagcgacctggtcgtgactcaacc 4070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 443945 - 444011
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccacgaaacgtc 91  Q
    |||||||||||| |||||||||||||| |||||| |||||||||| || |  ||||||||||||||||    
T  443945 tgttttatcctg-agacggcgtggttgatagtctgccttgcacaattttggcagtgccacgaaacgtc 444011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 15 - 130
Target Start/End: Original strand, 33959 - 34075
Alignment:
Q  15 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccacgaaacgtcttaaagagagcgacctgatcgt 113  Q
    ||||| || |||||||||||| ||  || | |||||||| ||||||||| |||| ||| | ||||||| |||||||||||||||||||||||||| ||||    
T  33959 gatctaggttgttttatcctgaaggaggagcggttgttattctaccttgtacaaactttggtagtgccgcgaaacgtcttaaagagagcgacctggtcgt 34058  T
Q  114 gactcaacccgataatt 130  Q
    |||||||||||||||||    
T  34059 gactcaacccgataatt 34075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 83161 - 83062
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| |||| |||||| |||||| ||||||| || || || | ||| |||||||||||||||||||||||||||| |||||||||||||    
T  83161 tgttttatcctggaggcggcatggttgatagtctgccttgcataattttgggtggtgtcacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 83062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 166086 - 166185
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttg-gatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| ||||||||||| |||| |  ||||||||| ||  |  ||||||||||||||||||||||||||||||||| | |||||||||||    
T  166086 tgttttatcctggaggcggcgtggttgatagtatgtcttgcacaatttttggcagtgccacgaaacgtcttaaagagagcgacctggttgtgactcaacc 166185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 103
Target Start/End: Complemental strand, 35729 - 35649
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccacgaaacgtcttaaagagagcg 103  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||||  ||||  |||| |||||||||||||||||||||||    
T  35729 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggccagtgtcacgaaacgtcttaaagagagcg 35649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2020 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold2020
Description:

Target: scaffold2020; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 466 - 367
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaac-ttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| || |||||||| |||| |  |||||||||| ||||| | ||||| ||||||||||||| | |||||| |  |||||||||||||    
T  466 tgttttatcctggaggcgacgtggttgatagtgtgtcttgcacaactttggacaatgccatgaaacgtcttaaaaaaagcgacatagtcgtgactcaacc 367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 165029 - 165128
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaac-ttggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacc 122  Q
    ||||||||||||||| || |||||||| |||| |  |||||||||| ||||| | ||||| ||||||||||||| | |||||| |  |||||||||||||    
T  165029 tgttttatcctggaggcgacgtggttgatagtgtgtcttgcacaactttggacaatgccatgaaacgtcttaaaaaaagcgacatagtcgtgactcaacc 165128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 114
Target Start/End: Complemental strand, 255912 - 255821
Alignment:
Q  24 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtg 114  Q
    ||||||||||||||| |||| | |||| |||| |  ||||||||| || || |||||||||||||| |||||||||||| |||||| |||||    
T  255912 tgttttatcctggaggcggcatagttgatagtatgtcttgcacaattttgggtagtgccacgaaacctcttaaagagagtgacctggtcgtg 255821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 1247 - 1325
Alignment:
Q  46 ggttgttagtctaccttgcacaactt-ggatagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaaccc 123  Q
    ||||||||||||||||||||||| || || |||||||  ||   |||||||||| ||||||||| ||||||||||||||    
T  1247 ggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgactcaaccc 1325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 171711 - 171798
Alignment:
Q  19 tgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttg-gatagtgccacgaaacgtcttaaagagagcgacct 107  Q
    |||||||||||||||| | |||| |||||||| |||||| | |||||||| ||  |  ||||||||||||||||||||||||||||||||    
T  171711 tgggctgttttatcctag-gacgtcgtggttgatagtctgc-ttgcacaattttaggcagtgccacgaaacgtcttaaagagagcgacct 171798  T

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