View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0033_high_1 (Length: 500)

Name: NF0033_high_1
Description: NF0033
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0033_high_1
NF0033_high_1
[»] chr4 (40 HSPs)
chr4 (47-497)||(22234644-22235105)
chr4 (227-322)||(23292926-23293021)
chr4 (227-324)||(35161060-35161157)
chr4 (227-322)||(8423658-8423753)
chr4 (227-322)||(35157925-35158020)
chr4 (238-322)||(34306744-34306828)
chr4 (227-322)||(12895214-12895309)
chr4 (229-322)||(2361915-2362008)
chr4 (267-324)||(19482743-19482800)
chr4 (227-291)||(49431050-49431114)
chr4 (227-322)||(36509032-36509127)
chr4 (227-322)||(40179576-40179671)
chr4 (227-329)||(28964181-28964283)
chr4 (257-321)||(3947702-3947766)
chr4 (227-291)||(29205468-29205532)
chr4 (227-279)||(54580006-54580058)
chr4 (227-318)||(12797282-12797373)
chr4 (251-326)||(30982803-30982878)
chr4 (227-322)||(715545-715642)
chr4 (227-322)||(752871-752968)
chr4 (271-317)||(3712458-3712504)
chr4 (251-324)||(53381528-53381602)
chr4 (227-304)||(9996864-9996941)
chr4 (267-320)||(19312410-19312463)
chr4 (252-325)||(24613627-24613700)
chr4 (257-321)||(14465006-14465070)
chr4 (227-322)||(16886633-16886726)
chr4 (251-322)||(24343560-24343632)
chr4 (273-324)||(18513173-18513224)
chr4 (267-322)||(29205532-29205587)
chr4 (275-322)||(37203324-37203371)
chr4 (251-324)||(10133756-10133830)
chr4 (274-324)||(11596295-11596345)
chr4 (230-324)||(16073421-16073515)
chr4 (168-198)||(37203220-37203250)
chr4 (227-320)||(4157173-4157266)
chr4 (267-320)||(28000672-28000725)
chr4 (231-283)||(8402721-8402773)
chr4 (229-285)||(21945529-21945585)
chr4 (279-323)||(40784029-40784073)
[»] chr1 (44 HSPs)
chr1 (170-320)||(29163323-29163477)
chr1 (227-324)||(5898204-5898301)
chr1 (227-323)||(1815281-1815377)
chr1 (227-321)||(12918969-12919063)
chr1 (233-323)||(37598861-37598951)
chr1 (227-324)||(51410049-51410146)
chr1 (187-325)||(2896058-2896195)
chr1 (227-321)||(40258874-40258968)
chr1 (251-324)||(9828103-9828176)
chr1 (229-322)||(18190048-18190141)
chr1 (227-308)||(40181895-40181976)
chr1 (168-261)||(39953147-39953239)
chr1 (265-320)||(17778615-17778670)
chr1 (227-322)||(18337353-18337448)
chr1 (227-322)||(22515827-22515922)
chr1 (178-283)||(36878437-36878541)
chr1 (227-320)||(1486646-1486744)
chr1 (251-324)||(40917808-40917881)
chr1 (227-320)||(42359391-42359484)
chr1 (267-323)||(6427539-6427595)
chr1 (250-322)||(32461393-32461465)
chr1 (255-322)||(18556385-18556452)
chr1 (227-322)||(38078601-38078696)
chr1 (231-322)||(46348323-46348414)
chr1 (271-317)||(1209821-1209867)
chr1 (233-325)||(9690210-9690303)
chr1 (231-322)||(52903277-52903365)
chr1 (272-323)||(46940747-46940798)
chr1 (251-322)||(47989556-47989627)
chr1 (227-321)||(10233277-10233374)
chr1 (227-273)||(17705576-17705621)
chr1 (227-323)||(20157283-20157385)
chr1 (271-317)||(23219608-23219654)
chr1 (227-261)||(30749864-30749898)
chr1 (227-261)||(30771315-30771349)
chr1 (227-261)||(34371737-34371771)
chr1 (227-261)||(44482254-44482288)
chr1 (227-260)||(1864882-1864915)
chr1 (269-322)||(5944360-5944413)
chr1 (227-260)||(13997907-13997940)
chr1 (269-322)||(19562556-19562608)
chr1 (229-261)||(23636050-23636082)
chr1 (251-323)||(31694638-31694710)
chr1 (227-291)||(43492465-43492529)
[»] chr6 (35 HSPs)
chr6 (227-322)||(7378003-7378098)
chr6 (227-322)||(28152122-28152217)
chr6 (227-322)||(34595158-34595253)
chr6 (229-326)||(28715321-28715418)
chr6 (228-319)||(32978842-32978933)
chr6 (170-286)||(7265569-7265684)
chr6 (267-324)||(8776906-8776963)
chr6 (251-324)||(10339052-10339125)
chr6 (227-291)||(9658903-9658967)
chr6 (266-321)||(31959213-31959268)
chr6 (227-325)||(4877967-4878064)
chr6 (227-319)||(9025448-9025529)
chr6 (227-305)||(12627534-12627612)
chr6 (227-321)||(17841530-17841624)
chr6 (227-285)||(33001266-33001324)
chr6 (229-322)||(7977770-7977863)
chr6 (251-324)||(8365446-8365519)
chr6 (251-324)||(10294166-10294239)
chr6 (227-323)||(16833332-16833428)
chr6 (227-326)||(7740665-7740764)
chr6 (187-322)||(9027163-9027286)
chr6 (251-322)||(9107299-9107370)
chr6 (227-322)||(13360313-13360407)
chr6 (251-322)||(16766756-16766827)
chr6 (257-324)||(17327588-17327655)
chr6 (227-322)||(24645505-24645600)
chr6 (229-323)||(6898220-6898314)
chr6 (227-261)||(7027266-7027300)
chr6 (273-319)||(8389411-8389457)
chr6 (267-324)||(12236723-12236780)
chr6 (227-272)||(19040376-19040421)
chr6 (252-320)||(5000557-5000625)
chr6 (233-277)||(30851630-30851674)
chr6 (227-278)||(31579211-31579260)
chr6 (274-322)||(34894968-34895016)
[»] chr3 (41 HSPs)
chr3 (170-322)||(18426917-18427068)
chr3 (227-325)||(40993272-40993370)
chr3 (227-327)||(55401099-55401199)
chr3 (168-322)||(27505212-27505370)
chr3 (251-325)||(41961576-41961650)
chr3 (229-322)||(20503491-20503584)
chr3 (227-322)||(35222962-35223057)
chr3 (227-320)||(25775533-25775624)
chr3 (227-321)||(8789489-8789585)
chr3 (251-324)||(14209172-14209245)
chr3 (250-322)||(25074841-25074914)
chr3 (271-324)||(40052380-40052433)
chr3 (267-324)||(49651714-49651771)
chr3 (227-291)||(3631708-3631772)
chr3 (227-291)||(10954976-10955040)
chr3 (227-322)||(11252002-11252095)
chr3 (257-321)||(14216957-14217021)
chr3 (257-321)||(14223086-14223150)
chr3 (227-318)||(25093526-25093617)
chr3 (268-322)||(17276792-17276846)
chr3 (251-320)||(4987222-4987291)
chr3 (170-219)||(23870601-23870650)
chr3 (227-292)||(45451577-45451642)
chr3 (227-320)||(28918025-28918120)
chr3 (231-320)||(29508472-29508567)
chr3 (227-282)||(2941582-2941637)
chr3 (227-278)||(3865698-3865749)
chr3 (227-322)||(13845465-13845560)
chr3 (231-322)||(23657767-23657858)
chr3 (251-322)||(25064966-25065037)
chr3 (227-261)||(7928474-7928508)
chr3 (268-322)||(8101892-8101946)
chr3 (272-322)||(11610578-11610628)
chr3 (268-322)||(34185052-34185106)
chr3 (267-324)||(52369851-52369908)
chr3 (231-323)||(7171529-7171621)
chr3 (282-322)||(8903514-8903554)
chr3 (251-291)||(14832158-14832198)
chr3 (170-198)||(15796381-15796409)
chr3 (257-317)||(16192667-16192727)
chr3 (277-321)||(25211604-25211648)
[»] chr5 (22 HSPs)
chr5 (170-322)||(42893328-42893479)
chr5 (227-324)||(43564905-43565002)
chr5 (227-320)||(21190998-21191091)
chr5 (227-322)||(21576685-21576780)
chr5 (227-320)||(30502330-30502423)
chr5 (227-320)||(30542673-30542766)
chr5 (228-323)||(14873542-14873642)
chr5 (232-309)||(26312798-26312875)
chr5 (230-318)||(30098982-30099070)
chr5 (227-324)||(28588612-28588709)
chr5 (251-291)||(21542089-21542129)
chr5 (251-322)||(7677764-7677835)
chr5 (251-322)||(32766872-32766943)
chr5 (248-319)||(39268541-39268612)
chr5 (251-322)||(39698600-39698671)
chr5 (229-323)||(27932261-27932355)
chr5 (274-324)||(38464311-38464361)
chr5 (257-322)||(30098391-30098456)
chr5 (231-324)||(32630673-32630766)
chr5 (274-322)||(19820328-19820376)
chr5 (251-291)||(21522809-21522849)
chr5 (251-291)||(21533375-21533415)
[»] chr7 (29 HSPs)
chr7 (227-322)||(598232-598327)
chr7 (227-321)||(32287404-32287498)
chr7 (229-322)||(21880178-21880271)
chr7 (227-323)||(15680833-15680929)
chr7 (227-323)||(1401049-1401143)
chr7 (257-324)||(5409769-5409836)
chr7 (229-328)||(5835273-5835372)
chr7 (251-321)||(32308179-32308249)
chr7 (227-324)||(33994236-33994333)
chr7 (231-322)||(21864836-21864927)
chr7 (230-321)||(22484052-22484143)
chr7 (251-322)||(24339701-24339772)
chr7 (227-321)||(20549815-20549909)
chr7 (257-322)||(32093954-32094020)
chr7 (250-322)||(7133212-7133285)
chr7 (227-272)||(9482958-9483003)
chr7 (257-322)||(43027404-43027469)
chr7 (227-299)||(27093376-27093448)
chr7 (227-299)||(27184853-27184925)
chr7 (269-324)||(9778571-9778626)
chr7 (227-322)||(18212973-18213068)
chr7 (227-322)||(42720830-42720925)
chr7 (227-261)||(640137-640171)
chr7 (268-322)||(17852065-17852119)
chr7 (227-261)||(22602711-22602745)
chr7 (251-320)||(26033392-26033461)
chr7 (171-219)||(20545278-20545326)
chr7 (234-322)||(24105709-24105797)
chr7 (227-291)||(39138468-39138532)
[»] scaffold0652 (1 HSPs)
scaffold0652 (227-321)||(403-497)
[»] chr2 (31 HSPs)
chr2 (227-320)||(2438661-2438754)
chr2 (229-322)||(18840953-18841046)
chr2 (227-321)||(28596493-28596587)
chr2 (227-322)||(30404790-30404885)
chr2 (233-323)||(15972903-15972993)
chr2 (227-291)||(5367216-5367280)
chr2 (227-322)||(37559001-37559096)
chr2 (229-323)||(34993921-34994015)
chr2 (251-324)||(37419802-37419875)
chr2 (227-283)||(20242706-20242762)
chr2 (251-322)||(35056927-35056998)
chr2 (227-322)||(38117099-38117194)
chr2 (252-322)||(26769571-26769641)
chr2 (227-313)||(29176442-29176528)
chr2 (50-115)||(39983997-39984062)
chr2 (269-322)||(42511322-42511375)
chr2 (227-291)||(5040758-5040822)
chr2 (250-322)||(21782744-21782816)
chr2 (227-299)||(31808101-31808173)
chr2 (227-291)||(37411215-37411279)
chr2 (227-322)||(24009320-24009414)
chr2 (251-321)||(5891715-5891785)
chr2 (256-322)||(11223793-11223858)
chr2 (268-322)||(19980740-19980794)
chr2 (169-219)||(27084229-27084279)
chr2 (273-322)||(24975255-24975304)
chr2 (165-198)||(27447088-27447121)
chr2 (227-291)||(41843465-41843534)
chr2 (227-259)||(23718050-23718082)
chr2 (227-259)||(24105722-24105754)
chr2 (233-324)||(37497150-37497242)
[»] scaffold0050 (1 HSPs)
scaffold0050 (229-319)||(70304-70394)
[»] chr8 (34 HSPs)
chr8 (227-320)||(3025575-3025668)
chr8 (177-324)||(5813567-5813713)
chr8 (251-324)||(29510231-29510304)
chr8 (227-291)||(20679366-20679430)
chr8 (235-290)||(926760-926815)
chr8 (227-322)||(14134723-14134818)
chr8 (251-322)||(22652035-22652106)
chr8 (228-299)||(33405347-33405418)
chr8 (229-322)||(24413499-24413592)
chr8 (227-324)||(40332215-40332312)
chr8 (251-322)||(15816058-15816129)
chr8 (273-324)||(27213595-27213646)
chr8 (251-322)||(29447503-29447574)
chr8 (227-322)||(36450694-36450789)
chr8 (240-314)||(126295-126369)
chr8 (227-324)||(18407743-18407840)
chr8 (227-316)||(38079023-38079112)
chr8 (227-291)||(31557020-31557084)
chr8 (249-324)||(949203-949278)
chr8 (227-322)||(3951476-3951571)
chr8 (168-199)||(4298965-4298996)
chr8 (227-261)||(4786339-4786373)
chr8 (227-309)||(8293849-8293931)
chr8 (257-323)||(8343381-8343447)
chr8 (227-261)||(8847280-8847314)
chr8 (227-261)||(11927087-11927121)
chr8 (229-279)||(22596020-22596070)
chr8 (227-261)||(26902176-26902210)
chr8 (227-322)||(37283755-37283845)
chr8 (227-321)||(43737752-43737846)
chr8 (227-280)||(9414857-9414910)
chr8 (273-322)||(40064032-40064081)
chr8 (227-291)||(20873093-20873157)
chr8 (268-324)||(22197669-22197725)
[»] scaffold0003 (2 HSPs)
scaffold0003 (251-322)||(241653-241724)
scaffold0003 (272-324)||(236912-236964)
[»] scaffold0053 (1 HSPs)
scaffold0053 (238-322)||(8833-8917)
[»] scaffold0019 (1 HSPs)
scaffold0019 (251-324)||(71784-71857)
[»] scaffold0361 (1 HSPs)
scaffold0361 (171-322)||(14498-14646)
[»] scaffold0793 (1 HSPs)
scaffold0793 (227-322)||(4821-4918)
[»] scaffold0083 (1 HSPs)
scaffold0083 (229-290)||(45502-45563)
[»] scaffold0004 (1 HSPs)
scaffold0004 (170-219)||(92775-92824)
[»] scaffold0123 (1 HSPs)
scaffold0123 (251-322)||(44454-44525)
[»] scaffold0020 (1 HSPs)
scaffold0020 (272-322)||(135263-135313)
[»] scaffold0022 (1 HSPs)
scaffold0022 (231-284)||(90871-90924)
[»] scaffold0136 (1 HSPs)
scaffold0136 (170-198)||(3941-3969)
[»] scaffold0044 (1 HSPs)
scaffold0044 (251-291)||(53239-53279)


Alignment Details
Target: chr4 (Bit Score: 367; Significance: 0; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 47 - 497
Target Start/End: Complemental strand, 22235105 - 22234644
Alignment:
Q  47 ccaacctcagcctgaggtagcagagtaacttgtgtataaacctcatcattctccttgttggcctgttaaaataaacatgaatttaagcaaaaccaaaata 146  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22235105 ccaacctcagcctgaggtagcagagtaacttgcgtataaacctcatcattctccttgttggcctgttaaaataaacatgaatttaagcaaaaccaaaata 22235006  T
Q  147 tgttacatgaattcagtaaagacctatgaagcacggatatggacacggacacgccgagaccgctaaaaatttgnnnnnnntcacataattcagtgtaatt 246  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||       ||||||||||||||||||||    
T  22235005 tgttacatgaattcagtaaagacctatgaagcacggatacggacacggacacgccgacaccgctaaaaatttgaaaaaaatcacataattcagtgtaatt 22234906  T
Q  247 ctatgtgtcggtgtc-----------tgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggtaaacactaata 335  Q
    |||||||||||||||           |||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  22234905 ctatgtgtcggtgtcgtgtcggtgtctgacacgacacgtgtccgacaccaggacacagctaatccgagaagtgttcgtgcttcataggtaaacactaata 22234806  T
Q  336 gttaattcaaagagtataattgagtacttacaagtagttggacattgacaaccctgcaaaagatctgaggctgaagatcatagtttggtatctccaattg 435  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22234805 gttaattcaaagagtataattgagtacttacaagtagttggacattgacaaccctgcaaaagatctgaggctgaagatcatagtttggtatctccaattg 22234706  T
Q  436 cttaaaaggagaaaaagaagcaaattgtaccaagtgacattgtggaaaatataccacaacat 497  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||    
T  22234705 cttaaaaggagaaaaagaagcaaattgttccaagtgaccttgtggaaaatacaccacaacat 22234644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 23293021 - 23292926
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||||||||||| |||||  | ||||||||||| ||| |||||||||||||||||||||||||  |||||| ||| ||||| ||||||||||||    
T  23293021 tcacataattcagtataattacaagtgtcggtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 23292926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 227 - 324
Target Start/End: Original strand, 35161060 - 35161157
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    |||||||||||||||||||| || || || | ||| ||| |||||||||||||||||||| ||||| |||||| || |||||| ||||||||||||||    
T  35161060 tcacataattcagtgtaattataagtatcagagtcggacacgacacgtgtccgacaccggaacacacctaatccgaaaagtgtccgtgcttcataggt 35161157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 8423753 - 8423658
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||||||||||||||||| ||  |||||||||| ||| |||||  ||||||||||||||||||  |||||| ||||||||| ||||| ||||||    
T  8423753 tcacataattcagtgtaattataaatgtcggtgtcggacacgacagctgtccgacaccgggacacgcctaatcggagaagtgtccgtgcgtcatag 8423658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 35158020 - 35157925
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||||||| ||||||||| || ||||||||||||||| |||||| ||||| ||||||| ||||   ||||| ||||||||| ||||||||||||    
T  35158020 tcacataatttagtgtaattataagtgtcggtgtctgacacgacacatgtccaacaccggaacacgcttaatccgagaagtgtccgtgcttcatag 35157925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 238 - 322
Target Start/End: Complemental strand, 34306828 - 34306744
Alignment:
Q  238 agtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||||||  | ||||||||||| ||| ||||||||||||||||||| |||||  |||||||||| | ||||||||||||||||    
T  34306828 agtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggaatgttcgtgcttcatag 34306744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 12895309 - 12895214
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||||||  |||||||| || ||||||||||| ||| ||||| || ||||||| ||||||||  |||||| ||| ||||||||||||||||||    
T  12895309 tcacataattttgtgtaattataagtgtcggtgtcggacacgacatgtatccgacatcgggacacgcctaatccgaggagtgttcgtgcttcatag 12895214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 229 - 322
Target Start/End: Complemental strand, 2362008 - 2361915
Alignment:
Q  229 acataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||||| |||||||||  | ||||||||||| ||| |||| |||||| ||||||| |||||| |||||||||  ||||| ||||||||||||    
T  2362008 acataatttagtgtaattaaaagtgtcggtgtcggacacgactcgtgtctgacaccgagacacacctaatctgacgagtgtccgtgcttcatag 2361915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 267 - 324
Target Start/End: Original strand, 19482743 - 19482800
Alignment:
Q  267 cgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    ||||||||||||||||| |||||||| |||||| ||| ||||||||||||||||||||    
T  19482743 cgacacgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcataggt 19482800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 291
Target Start/End: Original strand, 49431050 - 49431114
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacac 291  Q
    ||||||||||||||||||||  | ||||||||||| ||| |||||||||||| ||||||||||||    
T  49431050 tcacataattcagtgtaattaaaagtgtcggtgtcggacacgacacgtgtccaacaccgggacac 49431114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 36509127 - 36509032
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||||||  ||||||||| |||||||||| ||| ||||||||||||||| || ||| ||||||   ||||| ||||||| ||| ||||||||||    
T  36509127 tcacataatcaagtgtaattatatgtgtcggcgtcggacgcgacacgtgtctgataccaggacacgtttaatccgagaagtattcatgcttcatag 36509032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 40179671 - 40179576
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||||||||||||||||| |||| ||||||||| ||| |||||| ||| |||||||  |||||  |||||| ||||| | ||||||||| ||||    
T  40179671 tcacataattcagtgtaattatatgcgtcggtgtcggacacgacacatgttcgacaccatgacacgcctaatccgagaattattcgtgcttgatag 40179576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 227 - 329
Target Start/End: Complemental strand, 28964283 - 28964181
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggtaa 326  Q
    ||||||||||||||||||||  | ||||| ||||| ||| |||||| | |||||||| |||||||  |||||| ||| ||||| | |||||||||| |||    
T  28964283 tcacataattcagtgtaattacaagtgtctgtgtcggacacgacacatatccgacactgggacacgcctaatccgaggagtgtccatgcttcatagttaa 28964184  T
Q  327 aca 329  Q
    |||    
T  28964183 aca 28964181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 3947766 - 3947702
Alignment:
Q  257 gtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcata 321  Q
    ||||| ||| |||||||||||||||||| ||||||| |||||| ||| ||||| |||||||||||    
T  3947766 gtgtcggacacgacacgtgtccgacaccaggacacacctaatccgaggagtgtccgtgcttcata 3947702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 291
Target Start/End: Original strand, 29205468 - 29205532
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacac 291  Q
    ||||||||||||||||||||  | ||||||||||  ||| |||||| ||||||||||||||||||    
T  29205468 tcacataattcagtgtaattacaagtgtcggtgttggacacgacacatgtccgacaccgggacac 29205532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 54580058 - 54580006
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccg 279  Q
    |||||||||||||||||||| || ||||||||||| ||| |||||||||||||    
T  54580058 tcacataattcagtgtaattataagtgtcggtgtcggacacgacacgtgtccg 54580006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 227 - 318
Target Start/End: Complemental strand, 12797373 - 12797282
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttc 318  Q
    ||||||||||||||||||||  | ||||||||||| ||| ||| || |||| ||||||||||||   |||||| ||| | ||||||||||||    
T  12797373 tcacataattcagtgtaattacaagtgtcggtgtcggacacgatacatgtctgacaccgggacaagtctaatccgaggaatgttcgtgcttc 12797282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 251 - 326
Target Start/End: Complemental strand, 30982878 - 30982803
Alignment:
Q  251 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggtaa 326  Q
    ||||||||||| ||| |||||||||||||||||||||||||  ||||||  |  ||||| ||||||||||| ||||    
T  30982878 gtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccaaagagtgtccgtgcttcatatgtaa 30982803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 715642 - 715545
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctg--acgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||||||||||||||||  | |||| |||||||   || |||||| |||||||||| |||||||  |||||| ||| ||||| ||||||||||||    
T  715642 tcacataattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 715545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 752968 - 752871
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctg--acgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||||||||||||||||  | |||| |||||||   || |||||| |||||||||| |||||||  |||||| ||| ||||| ||||||||||||    
T  752968 tcacataattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 752871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 317
Target Start/End: Complemental strand, 3712504 - 3712458
Alignment:
Q  271 acgtgtccgacaccgggacacagctaatctgagaagtgttcgtgctt 317  Q
    ||||||||||||||||||||| ||||||||||| ||||| |||||||    
T  3712504 acgtgtccgacaccgggacacggctaatctgaggagtgtccgtgctt 3712458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 324
Target Start/End: Complemental strand, 53381602 - 53381528
Alignment:
Q  251 gtgtcggtgtctgacgc-gacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    ||||||||||| ||| | ||| ||| ||||||||||||||||| |||||| ||| ||||| ||||||||||||||    
T  53381602 gtgtcggtgtcggacactgacgcgtatccgacaccgggacacacctaatccgaggagtgtccgtgcttcataggt 53381528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 227 - 304
Target Start/End: Original strand, 9996864 - 9996941
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgaga 304  Q
    |||||||||||||| ||||| ||||| |||||||| |||   ||||||||||||||| || ||||| |||||| ||||    
T  9996864 tcacataattcagtataattatatgtctcggtgtcagacataacacgtgtccgacactggaacacacctaatcggaga 9996941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 267 - 320
Target Start/End: Original strand, 19312410 - 19312463
Alignment:
Q  267 cgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 320  Q
    ||||||||||||||||||| |||||  |||||||||||||||| |||| |||||    
T  19312410 cgacacgtgtccgacaccgagacacgtctaatctgagaagtgtccgtgtttcat 19312463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 252 - 325
Target Start/End: Complemental strand, 24613700 - 24613627
Alignment:
Q  252 tgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggta 325  Q
    |||||||||| ||| ||||||||||| |||||| ||||||  ||||||  || ||||| |||||||||||||||    
T  24613700 tgtcggtgtcagacacgacacgtgtctgacaccaggacacgtctaatcctaggagtgtccgtgcttcataggta 24613627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 14465070 - 14465006
Alignment:
Q  257 gtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcata 321  Q
    ||||| ||| |||||||||| |||||| |||||||  |||||||||| ||||| |||||||||||    
T  14465070 gtgtcagacacgacacgtgttcgacactgggacacgtctaatctgaggagtgtccgtgcttcata 14465006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 16886633 - 16886726
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||||||||||| |||   |||||| |||| | ||| | ||| |||||||||||||| |||| |||||||| |||||||| ||||||| ||||    
T  16886633 tcacataattcagtgaaata--atgtgttggtgacagacactacatgtgtccgacaccggaacacggctaatctcagaagtgtccgtgcttgatag 16886726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 24343560 - 24343632
Alignment:
Q  251 gtgtcggtgtctgacgc-gacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||||||| ||| | ||| ||||||||||||||||||||  ||| |||||| ||||| ||||||||||||    
T  24343560 gtgtcggtgtccgacaccgacgcgtgtccgacaccgggacacgcctattctgaggagtgtccgtgcttcatag 24343632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 324
Target Start/End: Complemental strand, 18513224 - 18513173
Alignment:
Q  273 gtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    |||||||||||| ||||||  |||||||||| ||||| ||||||||||||||    
T  18513224 gtgtccgacaccaggacacgcctaatctgaggagtgtccgtgcttcataggt 18513173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 267 - 322
Target Start/End: Original strand, 29205532 - 29205587
Alignment:
Q  267 cgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||| |||||||||| |||||||  |||||| ||| ||||||||||||||||||    
T  29205532 cgacacatgtccgacactgggacacgcctaatccgaggagtgttcgtgcttcatag 29205587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 322
Target Start/End: Original strand, 37203324 - 37203371
Alignment:
Q  275 gtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||||||||||||||  |||||| ||||||||| ||||||||||||    
T  37203324 gtccgacaccgggacacgtctaatccgagaagtgtccgtgcttcatag 37203371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 324
Target Start/End: Original strand, 10133756 - 10133830
Alignment:
Q  251 gtgtcggtgtctgacgc-gacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    ||||||||||| ||| | ||| ||||||||||||| ||||||| |||||||||| |  |||| ||||||||||||    
T  10133756 gtgtcggtgtcagacactgacgcgtgtccgacaccaggacacacctaatctgaggaacgttcatgcttcataggt 10133830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 324
Target Start/End: Complemental strand, 11596345 - 11596295
Alignment:
Q  274 tgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    ||||||||| ||||||||  |||||||||| ||||| ||||||||||||||    
T  11596345 tgtccgacatcgggacacgcctaatctgaggagtgtccgtgcttcataggt 11596295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 324
Target Start/End: Original strand, 16073421 - 16073515
Alignment:
Q  230 cataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    |||||||||||||||||  | ||||||||||| ||| ||| || ||||||||||   |||||  |||||| ||| ||||| | ||||||||||||    
T  16073421 cataattcagtgtaattacaagtgtcggtgtcggacacgatacatgtccgacactaagacacgcctaatccgaggagtgtccatgcttcataggt 16073515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 198
Target Start/End: Original strand, 37203220 - 37203250
Alignment:
Q  168 acctatgaagcacggatatggacacggacac 198  Q
    |||||||||||||||||||||||||||||||    
T  37203220 acctatgaagcacggatatggacacggacac 37203250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 320
Target Start/End: Original strand, 4157173 - 4157266
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 320  Q
    |||||||||| |||| ||||  | ||||||||||| ||| |||||| |||||||||||| || ||| |||||  ||| |||||  |||||||||    
T  4157173 tcacataatttagtgcaattacaagtgtcggtgtcggacacgacacatgtccgacaccgagaaacacctaattcgaggagtgtctgtgcttcat 4157266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 28000725 - 28000672
Alignment:
Q  267 cgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 320  Q
    ||||||||||| ||||||| |||||| |||||||||  ||||| ||||||||||    
T  28000725 cgacacgtgtctgacaccgagacacacctaatctgatgagtgtccgtgcttcat 28000672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 283
Target Start/End: Complemental strand, 8402773 - 8402721
Alignment:
Q  231 ataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacac 283  Q
    |||||||||||||||| ||||| || ||||| ||| |||||| ||||||||||    
T  8402773 ataattcagtgtaattatatgtctcagtgtcagacacgacacttgtccgacac 8402721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 229 - 285
Target Start/End: Original strand, 21945529 - 21945585
Alignment:
Q  229 acataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccg 285  Q
    ||||||||||||||||||  | ||||||||||| |||  ||||| ||||||||||||    
T  21945529 acataattcagtgtaattacaagtgtcggtgtcggacatgacacatgtccgacaccg 21945585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 279 - 323
Target Start/End: Original strand, 40784029 - 40784073
Alignment:
Q  279 gacaccgggacacagctaatctgagaagtgttcgtgcttcatagg 323  Q
    |||||||||||||| |||||| ||| ||||| |||||||||||||    
T  40784029 gacaccgggacacacctaatccgaggagtgtccgtgcttcatagg 40784073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 4e-27; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 170 - 320
Target Start/End: Complemental strand, 29163477 - 29163323
Alignment:
Q  170 ctatgaagcacggatatggacacg-----gacacgccgagaccgctaaaaatttgnnnnnnntcacataattcagtgtaattctatgtgtcggtgtctga 264  Q
    |||||||||||||||||||||||      |||||||||| ||||||||||||||        |||||||||||| | ||||| |||||||||||||| ||    
T  29163477 ctatgaagcacggatatggacacaacacagacacgccgacaccgctaaaaattt-aggaaaatcacataattcaatttaattatatgtgtcggtgtcgga 29163379  T
Q  265 cgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 320  Q
    | ||||||||| | ||||||||||||| ||||||| ||||||||||||||||||||    
T  29163378 cacgacacgtgcctgacaccgggacacggctaatcagagaagtgttcgtgcttcat 29163323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 227 - 324
Target Start/End: Complemental strand, 5898301 - 5898204
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    |||||||||||||||||||| |||| ||||||||| ||| |||||||||||| ||||||||||||  |||||| ||| ||||| ||||||| ||||||    
T  5898301 tcacataattcagtgtaattatatgcgtcggtgtcagacacgacacgtgtccaacaccgggacacgtctaatccgaggagtgtccgtgctttataggt 5898204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 1815281 - 1815377
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatagg 323  Q
    ||||||||||||||||||||  | ||||||||||| ||| |||||| ||||||||||||||||||  |||||||||| ||||  |||| ||||||||    
T  1815281 tcacataattcagtgtaattacaagtgtcggtgtccgacacgacacatgtccgacaccgggacacgcctaatctgaggagtgaccgtgattcatagg 1815377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 321
Target Start/End: Original strand, 12918969 - 12919063
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcata 321  Q
    |||||||||||| ||| ||| ||||||| ||| || ||| ||||||||||| ||||| ||||||| ||| ||| |||||||||||||||||||||    
T  12918969 tcacataattcaatgtgattatatgtgttggtatcggacacgacacgtgtctgacacggggacacggcttatccgagaagtgttcgtgcttcata 12919063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 233 - 323
Target Start/End: Original strand, 37598861 - 37598951
Alignment:
Q  233 aattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatagg 323  Q
    |||||||||||||| || ||||||||||| ||| ||||||||||||||||  |||||||  |||||| ||| ||||| |||||||||||||    
T  37598861 aattcagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacaatgggacacgcctaatccgaggagtgtccgtgcttcatagg 37598951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 227 - 324
Target Start/End: Original strand, 51410049 - 51410146
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    ||||||||||||||||||||  | ||||||||||| ||| |||||||| |||||||||| |||||  ||||||  || ||| ||||||||||||||||    
T  51410049 tcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtatccgacaccgagacacgcctaatccaaggagtattcgtgcttcataggt 51410146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 187 - 325
Target Start/End: Complemental strand, 2896195 - 2896058
Alignment:
Q  187 ggacacggacacgccgagaccgctaaaaatttgnnnnnnntcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgg 286  Q
    |||||| |||||||||| |||||||| ||||||       |||||||||||||||||  | ||| |||||||||| ||| ||||| |||||||| |||||    
T  2896195 ggacactgacacgccgacaccgctaataatttgagaaaa-tcacataattcagtgtagctatatatgtcggtgtcagacacgacatgtgtccgagaccgg 2896097  T
Q  287 gacacagctaatctgagaagtgttcgtgcttcataggta 325  Q
    |||||| ||||||  |||||||| | || ||||||||||    
T  2896096 gacacacctaatccaagaagtgtccatgtttcataggta 2896058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 321
Target Start/End: Complemental strand, 40258968 - 40258874
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcata 321  Q
    ||||||||||||||||||||  | ||||||||||| ||| |||||| ||||||||||| ||||||  |||||| ||| ||||| | |||||||||    
T  40258968 tcacataattcagtgtaattacaagtgtcggtgtcagacacgacacctgtccgacaccaggacacgcctaatccgaggagtgtccatgcttcata 40258874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 251 - 324
Target Start/End: Original strand, 9828103 - 9828176
Alignment:
Q  251 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    ||||| ||||| ||| |||||||||||||||||||||||||  |||||| ||| ||||| ||||||||||||||    
T  9828103 gtgtccgtgtcagacacgacacgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcataggt 9828176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 229 - 322
Target Start/End: Complemental strand, 18190141 - 18190048
Alignment:
Q  229 acataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||||||||||||||  | |||||| |||| ||| | |||||||||||||||||||||||| |||||| ||| |||||  | |||||||||    
T  18190141 acataattcagtgtaattacaagtgtcgatgtcagacacaacacgtgtccgacaccgggacacacctaatccgaggagtgtatgcgcttcatag 18190048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 308
Target Start/End: Original strand, 40181895 - 40181976
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtg 308  Q
    |||||||||||||||||||| ||||| |||||||| ||| | |||||||||| ||||||||||||  |||||| ||| ||||    
T  40181895 tcacataattcagtgtaattatatgtatcggtgtcggacacaacacgtgtcctacaccgggacacgcctaatccgaggagtg 40181976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 168 - 261
Target Start/End: Complemental strand, 39953239 - 39953147
Alignment:
Q  168 acctatgaagcacggatatggacacggacacgccgagaccgctaaaaatttgnnnnnnntcacataattcagtgtaattctatgtgtcggtgtc 261  Q
    |||||||||| ||||||||||||||||| ||||||| |||||||| |||||        |||||||||| ||||||||| ||||||||||||||    
T  39953239 acctatgaagaacggatatggacacggaaacgccgacaccgctaataattt-tagaaaatcacataatttagtgtaattgtatgtgtcggtgtc 39953147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 320
Target Start/End: Original strand, 17778615 - 17778670
Alignment:
Q  265 cgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 320  Q
    ||||||||||||||||||||||||||   |||||| ||||||||||||||||||||    
T  17778615 cgcgacacgtgtccgacaccgggacatgcctaatccgagaagtgttcgtgcttcat 17778670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 18337353 - 18337448
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||||||||||||||||  | ||||||||||| ||| | ||||||||||||||| ||||||   || ||| ||| ||||| ||||||||||||    
T  18337353 tcacataattcagtgtaattacaagtgtcggtgtcggacacaacacgtgtccgacactgggacatgcctgatccgaggagtgtccgtgcttcatag 18337448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 22515922 - 22515827
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||||||| |||||||||  | ||||||||||| ||| |||||| | |||||||||| |||||  |||||| ||| ||||| ||||||||||||    
T  22515922 tcacataatttagtgtaattacaagtgtcggtgtcggacacgacacatatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 22515827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 178 - 283
Target Start/End: Original strand, 36878437 - 36878541
Alignment:
Q  178 cacggatatggacacggacacgccgagaccgctaaaaatttgnnnnnnntcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtc 277  Q
    |||||| || ||||| |||||||||| |||||||| ||||||       |||||||||||||||||||| || ||||||||||||||| ||| || ||||    
T  36878437 cacggacatagacactgacacgccgacaccgctaataatttgagaaaa-tcacataattcagtgtaattataggtgtcggtgtctgacacgaaacatgtc 36878535  T
Q  278 cgacac 283  Q
    ||||||    
T  36878536 cgacac 36878541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 227 - 320
Target Start/End: Complemental strand, 1486744 - 1486646
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtct-----gacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 320  Q
    |||||||||||||||||||| || |||||||||||      ||| |||||||||||||||||||||||||  |||||| ||| |||||  |||||||||    
T  1486744 tcacataattcagtgtaattataagtgtcggtgtcgtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 251 - 324
Target Start/End: Original strand, 40917808 - 40917881
Alignment:
Q  251 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    ||||||||||  ||| |||||||||||||||||||||||||  |||||| ||| | ||| ||||||||||||||    
T  40917808 gtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggactgtccgtgcttcataggt 40917881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 320
Target Start/End: Complemental strand, 42359484 - 42359391
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 320  Q
    ||||| ||||||||||||||  | ||||||||||| |||  |||  |||||||||||||||||||  |||||| ||| ||||| ||||||||||    
T  42359484 tcacaaaattcagtgtaattacaagtgtcggtgtcggacaagacgtgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 42359391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 6427539 - 6427595
Alignment:
Q  267 cgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatagg 323  Q
    |||||||||||||||||||||||||  |||||||||  ||||| |||||||||||||    
T  6427539 cgacacgtgtccgacaccgggacacgcctaatctgatgagtgtccgtgcttcatagg 6427595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 322
Target Start/End: Complemental strand, 32461465 - 32461393
Alignment:
Q  250 tgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||||||||| ||| ||||||||||| ||||| |||||||  ||||||  |||||||| ||||||||||||    
T  32461465 tgtgtcggtgtcggacacgacacgtgtctgacactgggacacgcctaatccaagaagtgtccgtgcttcatag 32461393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 255 - 322
Target Start/End: Complemental strand, 18556452 - 18556385
Alignment:
Q  255 cggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||| ||| |||||||| |||||||| |||||||  |||||| ||||||||| ||||||||||||    
T  18556452 cggtgtcagacccgacacgtatccgacactgggacacgcctaatccgagaagtgtccgtgcttcatag 18556385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 38078696 - 38078601
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||||||||| |||||||  | ||||||||||| ||| |||||| ||| | ||||| ||||||  |||||| ||| ||| ||||||||||||||    
T  38078696 tcacataattcaatgtaattacaagtgtcggtgtcggacacgacacatgttcaacaccaggacacgcctaatccgaggagtattcgtgcttcatag 38078601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 231 - 322
Target Start/End: Complemental strand, 46348414 - 46348323
Alignment:
Q  231 ataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||| |||||||||  | ||||||||||| ||| ||||||||||||||||||| |||||  || ||| |||  |||| ||||||||||||    
T  46348414 ataatttagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctgatccgaggtgtgtccgtgcttcatag 46348323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 317
Target Start/End: Original strand, 1209821 - 1209867
Alignment:
Q  271 acgtgtccgacaccgggacacagctaatctgagaagtgttcgtgctt 317  Q
    |||||||||||||| ||||||| |||||| |||||||||||||||||    
T  1209821 acgtgtccgacaccaggacacacctaatccgagaagtgttcgtgctt 1209867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 233 - 325
Target Start/End: Complemental strand, 9690303 - 9690210
Alignment:
Q  233 aattcagtgtaattctatgtgtcggtgtctgacgc-gacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggta 325  Q
    |||||||||||||  |||||||||| ||| | | | ||||||||||||||||||||||||  |||||| |   |||||| ||||||||||||||    
T  9690303 aattcagtgtaatcatatgtgtcggcgtcggccactgacacgtgtccgacaccgggacacgcctaatccggagagtgtttgtgcttcataggta 9690210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 322
Target Start/End: Original strand, 52903277 - 52903365
Alignment:
Q  231 ataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||||||||||||| |||||||||||||| |||   ||  ||||||||||||||||||| ||| ||  ||  ||||| ||||||||||||    
T  52903277 ataattcagtgtaattatatgtgtcggtgtcggac---acgtgtgtccgacaccgggacacggcttattcgaagagtgtccgtgcttcatag 52903365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 323
Target Start/End: Complemental strand, 46940798 - 46940747
Alignment:
Q  272 cgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatagg 323  Q
    ||||||||||||||| ||||  |||||| ||| |||||||||||||||||||    
T  46940798 cgtgtccgacaccggaacacgcctaatccgaggagtgttcgtgcttcatagg 46940747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 47989556 - 47989627
Alignment:
Q  251 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||||||| ||| |||||| |||| |||| ||||||||  |||||| ||| ||||| ||||||||||||    
T  47989556 gtgtcggtgtcggacacgacacatgtctgacatcgggacacgcctaatccgaggagtgtccgtgcttcatag 47989627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 321
Target Start/End: Original strand, 10233277 - 10233374
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtc--tgacgc-gacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcata 321  Q
    |||||||||||||||||||| |||||||| ||||   || ||  | || |||||||||||| ||||||| |||||| ||| ||||| |||||||||||    
T  10233277 tcacataattcagtgtaattatatgtgtctgtgttggtgtcggtgtcatgtgtccgacaccaggacacacctaatcagaggagtgtccgtgcttcata 10233374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 17705621 - 17705576
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacg 273  Q
    |||||||||||||||||||| |||||||| ||||| |||||||||||    
T  17705621 tcacataattcagtgtaattatatgtgtc-gtgtcggacgcgacacg 17705576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 323
Target Start/End: Complemental strand, 20157385 - 20157283
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtct-----gacgc-gacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 320  Q
    |||||||||||||||||||  ||||||||||||||      ||| | ||| |||||||||||||| |||||| ||||| |||| ||| | ||||||||||    
T  20157385 tcacataattcagtgtaatcatatgtgtcggtgtcgtgtccgacaccgacgcgtgtccgacaccgagacacacctaatttgaggagtatccgtgcttcat 20157286  T
Q  321 agg 323  Q
    |||    
T  20157285 agg 20157283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 317
Target Start/End: Complemental strand, 23219654 - 23219608
Alignment:
Q  271 acgtgtccgacaccgggacacagctaatctgagaagtgttcgtgctt 317  Q
    ||||||||||||||| |||||| |||||| |||||||||| ||||||    
T  23219654 acgtgtccgacaccgtgacacacctaatccgagaagtgtttgtgctt 23219608  T

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Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 261
Target Start/End: Original strand, 30749864 - 30749898
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtc 261  Q
    |||||||||||||||||||| ||||||||||||||    
T  30749864 tcacataattcagtgtaattatatgtgtcggtgtc 30749898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 261
Target Start/End: Original strand, 30771315 - 30771349
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtc 261  Q
    |||||||||||||||||||| ||||||||||||||    
T  30771315 tcacataattcagtgtaattatatgtgtcggtgtc 30771349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 261
Target Start/End: Original strand, 34371737 - 34371771
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtc 261  Q
    |||||||||||||||||||| ||||||||||||||    
T  34371737 tcacataattcagtgtaattatatgtgtcggtgtc 34371771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 261
Target Start/End: Original strand, 44482254 - 44482288
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtc 261  Q
    |||||||||||||||||||| ||||||||||||||    
T  44482254 tcacataattcagtgtaattatatgtgtcggtgtc 44482288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 260
Target Start/End: Complemental strand, 1864915 - 1864882
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgt 260  Q
    |||||||||||||||||||| |||||||||||||    
T  1864915 tcacataattcagtgtaattatatgtgtcggtgt 1864882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 322
Target Start/End: Original strand, 5944360 - 5944413
Alignment:
Q  269 acacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||| ||||||||||||||| ||  |||||| ||| ||||||||||||||||||    
T  5944360 acacatgtccgacaccgggatacgcctaatccgaggagtgttcgtgcttcatag 5944413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 260
Target Start/End: Original strand, 13997907 - 13997940
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgt 260  Q
    |||||||||||||||||||| |||||||||||||    
T  13997907 tcacataattcagtgtaattatatgtgtcggtgt 13997940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 322
Target Start/End: Complemental strand, 19562608 - 19562556
Alignment:
Q  269 acacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||||||||||| |||||||| |||||| ||| |||| |||||||||||||    
T  19562608 acacgtgtccgacacagggacacacctaatccgaggagtg-tcgtgcttcatag 19562556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 229 - 261
Target Start/End: Complemental strand, 23636082 - 23636050
Alignment:
Q  229 acataattcagtgtaattctatgtgtcggtgtc 261  Q
    |||||||||||||||||| ||||||||||||||    
T  23636082 acataattcagtgtaattgtatgtgtcggtgtc 23636050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 31694710 - 31694638
Alignment:
Q  251 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatagg 323  Q
    ||||||||||| ||| | |||| | | ||||||||| ||||  |||||||||| ||||| |||||||||||||    
T  31694710 gtgtcggtgtcggacacaacacatattcgacaccggaacacgcctaatctgaggagtgtccgtgcttcatagg 31694638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 291
Target Start/End: Complemental strand, 43492529 - 43492465
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacac 291  Q
    |||| |||||| |||||||| | |||||||||||| ||| | |||| ||||||||||||| ||||    
T  43492529 tcacgtaattcggtgtaattatgtgtgtcggtgtcagacacaacacatgtccgacaccggcacac 43492465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 7378003 - 7378098
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||||||||| ||||||| |||||||||||||| ||| ||||| |  |||||||||||||||| ||||||||||||||||| ||||||||||||    
T  7378003 tcacataattcaatgtaattatatgtgtcggtgtcggacacgacatgcatccgacaccgggacacggctaatctgagaagtgtccgtgcttcatag 7378098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 28152122 - 28152217
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||||||||||||||||  | ||||||||||| ||| ||||||||||||||||||||||||   |||||| ||| ||||||||||||||||||    
T  28152122 tcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgggacaggcctaatccgaggagtgttcgtgcttcatag 28152217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 34595158 - 34595253
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||||||||||||||||  | ||||||||||| ||| ||||||||||| |||||||||||||| |||||| ||| ||||| ||||||||||||    
T  34595158 tcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtctgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 34595253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 229 - 326
Target Start/End: Original strand, 28715321 - 28715418
Alignment:
Q  229 acataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggtaa 326  Q
    ||||||||||||||||||  | ||||||||||| ||| |||||||||| ||||||||||||||  |||||  ||||||||| ||||||||||||||||    
T  28715321 acataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgttcgacaccgggacacgcctaattcgagaagtgtacgtgcttcataggtaa 28715418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 319
Target Start/End: Complemental strand, 32978933 - 32978842
Alignment:
Q  228 cacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttca 319  Q
    ||||||||| |||||||||  | ||||||||||| ||| |||||| ||||||||||||||||||  ||||||  || ||||| |||||||||    
T  32978933 cacataattaagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccgggacacgtctaatccaaggagtgtccgtgcttca 32978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 170 - 286
Target Start/End: Complemental strand, 7265684 - 7265569
Alignment:
Q  170 ctatgaagcacggatatggacacggacacgccgagaccgctaaaaatttgnnnnnnntcacataattcagtgtaattctatgtgtcggtgtctgacgcga 269  Q
    |||||||||||| ||  |||||| |||||||| | |||||||| ||||||       |||||||||||||||||||| |||||||||||||| ||| | |    
T  7265684 ctatgaagcacgtattcggacactgacacgccaacaccgctaataatttgagaaaa-tcacataattcagtgtaattatatgtgtcggtgtcggacacaa 7265586  T
Q  270 cacgtgtccgacaccgg 286  Q
     || |||||||||||||    
T  7265585 tacatgtccgacaccgg 7265569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 267 - 324
Target Start/End: Complemental strand, 8776963 - 8776906
Alignment:
Q  267 cgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    ||||||||||||||||||| |||||| |||||| ||| ||||| ||||||||||||||    
T  8776963 cgacacgtgtccgacaccgagacacacctaatccgaggagtgtccgtgcttcataggt 8776906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 251 - 324
Target Start/End: Complemental strand, 10339125 - 10339052
Alignment:
Q  251 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    ||||||||||| ||| |||||| |||||||||| |||||||  |||||| ||| ||||| ||||||||||||||    
T  10339125 gtgtcggtgtcggacacgacacatgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcataggt 10339052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 291
Target Start/End: Original strand, 9658903 - 9658967
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacac 291  Q
    |||||||||||||||||||| ||| |||||||||  ||| ||||||||||| |||||||| ||||    
T  9658903 tcacataattcagtgtaattatatttgtcggtgttagacacgacacgtgtctgacaccggaacac 9658967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 266 - 321
Target Start/End: Original strand, 31959213 - 31959268
Alignment:
Q  266 gcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcata 321  Q
    |||||| |||||||||||||||||||| |||||| ||| ||||| |||||||||||    
T  31959213 gcgacatgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 31959268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 325
Target Start/End: Original strand, 4877967 - 4878064
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggta 325  Q
    |||||||||| ||| |||||  | ||||||||||| ||| |||||| ||||||||| | ||||||  |||||| ||| ||||| |||||||||||||||    
T  4877967 tcacataattaagtataattacaagtgtcggtgtcggacacgacacatgtccgaca-caggacacgcctaatccgaggagtgtccgtgcttcataggta 4878064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 319
Target Start/End: Complemental strand, 9025529 - 9025448
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttca 319  Q
    |||||||||||||||||||| ||||||||||||||           |||||||||||||||||||  |||||| ||||||||| |||||||||    
T  9025529 tcacataattcagtgtaattatatgtgtcggtgtc-----------gtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttca 9025448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 305
Target Start/End: Complemental strand, 12627612 - 12627534
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaa 305  Q
    |||||||||||||||||||  ||||||||| |||| ||| | |||| |||||||||||| |||||  |||||| |||||    
T  12627612 tcacataattcagtgtaataatatgtgtcgatgtcggacaccacacatgtccgacaccgagacactcctaatccgagaa 12627534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 321
Target Start/End: Complemental strand, 17841624 - 17841530
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcata 321  Q
    |||||||||| |||||||||  | ||| ||||||| ||| ||||| ||||||||||| | |||||  |||||| ||| ||||| |||||||||||    
T  17841624 tcacataatttagtgtaattacaagtgacggtgtcggacacgacatgtgtccgacactgagacacgcctaatccgaggagtgtccgtgcttcata 17841530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 285
Target Start/End: Complemental strand, 33001324 - 33001266
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccg 285  Q
    |||||||||| | ||||||| |||||||||||||| ||| ||||||||||| |||||||    
T  33001324 tcacataattaaatgtaattatatgtgtcggtgtcggacacgacacgtgtctgacaccg 33001266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 229 - 322
Target Start/End: Complemental strand, 7977863 - 7977770
Alignment:
Q  229 acataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||||||||||||||  | ||||||||||| ||| | |||  ||||||||| ||  ||||  ||||||| || ||||||||||||||||||    
T  7977863 acataattcagtgtaattacaagtgtcggtgtcggacacaacatatgtccgacaacgaaacacgcctaatctaaggagtgttcgtgcttcatag 7977770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 251 - 324
Target Start/End: Complemental strand, 8365519 - 8365446
Alignment:
Q  251 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    |||||||| || ||| ||||||||||||||||| |||||||  |||||| ||| ||| | ||||||||||||||    
T  8365519 gtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtctccgtgcttcataggt 8365446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 251 - 324
Target Start/End: Original strand, 10294166 - 10294239
Alignment:
Q  251 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    |||| |||||| ||| ||||| |||||||| ||  |||||||||||||||||| |||||  |||||||||||||    
T  10294166 gtgttggtgtcggacacgacatgtgtccgaaactaggacacagctaatctgaggagtgtctgtgcttcataggt 10294239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 16833332 - 16833428
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatagg 323  Q
    ||||||| ||||||||||||  | ||||||||||  ||| ||||||| |||||||||| ||||||| | |||| ||| |||||  || |||||||||    
T  16833332 tcacatacttcagtgtaattacaagtgtcggtgttagacacgacacgcgtccgacaccaggacacaccgaatccgaggagtgtctgtacttcatagg 16833428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 326
Target Start/End: Original strand, 7740665 - 7740764
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggtaa 326  Q
    ||||| |||| ||||||||| |||||||| ||||| ||| ||||||||  |||| ||| ||||||  ||   ||||||||||| |||| |||||||||||    
T  7740665 tcacaaaattgagtgtaattatatgtgtcagtgtcggacacgacacgtacccgataccaggacacgcctgccctgagaagtgtccgtgtttcataggtaa 7740764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 322
Target Start/End: Original strand, 9027163 - 9027286
Alignment:
Q  187 ggacacggacacgccgagaccgctaaaaatttgnnnnnnntcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgg 286  Q
    |||||| |||||||||| |||||||| ||||||       ||||||||||| |||||||| ||||||||||||||           ||||||||||||||    
T  9027163 ggacactgacacgccgacaccgctaataatttgagataa-tcacataattccgtgtaattatatgtgtcggtgtc-----------gtgtccgacaccgg 9027250  T
Q  287 gacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||| |||||||  || |||||| |||||||||||    
T  9027251 gacacggctaatccaaggagtgtttgtgcttcatag 9027286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 322
Target Start/End: Complemental strand, 9107370 - 9107299
Alignment:
Q  251 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||||||| ||| | ||  |||||||||||||||||||| |||||| ||| ||||  ||||||||||||    
T  9107370 gtgtcggtgtcggacacaacgtgtgtccgacaccgggacacacctaatccgaggagtgcccgtgcttcatag 9107299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 13360407 - 13360313
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||||||||||||||||| ||||| |||||||| ||| | |||  |||||||||| | |||||  |||||| ||  ||||| ||||||||||||    
T  13360407 tcacataattcagtgtaattatatgtttcggtgtcagacacaaca-atgtccgacactgagacacgcctaatccgaagagtgtccgtgcttcatag 13360313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 16766756 - 16766827
Alignment:
Q  251 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||||||| ||| | |||||||||||||||||||||||  |||||| ||  | ||| ||||||||||||    
T  16766756 gtgtcggtgtcggacacaacacgtgtccgacaccgggacacgcctaatccgaagaatgtccgtgcttcatag 16766827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 324
Target Start/End: Complemental strand, 17327655 - 17327588
Alignment:
Q  257 gtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    ||||| ||| ||||||||||| ||||| |||||||  |||||| ||| ||||| ||||||||||||||    
T  17327655 gtgtcggacacgacacgtgtctgacacagggacacgcctaatccgaggagtgtccgtgcttcataggt 17327588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 24645505 - 24645600
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||||||||||| || ||  | ||||||||||| ||| ||||||||||||||||||  |||||  |||||| ||  |||||  |||||||||||    
T  24645505 tcacataattcagtatagttacaagtgtcggtgtcagacacgacacgtgtccgacaccaagacacgtctaatccgaagagtgtctgtgcttcatag 24645600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 323
Target Start/End: Complemental strand, 6898314 - 6898220
Alignment:
Q  229 acataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatagg 323  Q
    |||||||| |||||||||  | ||||||||||| ||| |||  ||||||| ||||||  ||||  |||||| ||  |||||||||||||||||||    
T  6898314 acataattaagtgtaattacaagtgtcggtgtcggacacgaagcgtgtccaacaccgaaacacgcctaatccgatgagtgttcgtgcttcatagg 6898220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 261
Target Start/End: Original strand, 7027266 - 7027300
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtc 261  Q
    |||||||||||||||||||| ||||||||||||||    
T  7027266 tcacataattcagtgtaattatatgtgtcggtgtc 7027300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 8389457 - 8389411
Alignment:
Q  273 gtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttca 319  Q
    |||||||||||||||||||| |||||| ||| ||||| |||||||||    
T  8389457 gtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttca 8389411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 324
Target Start/End: Original strand, 12236723 - 12236780
Alignment:
Q  267 cgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    |||||| ||| || |||||||||||  |||| ||||| ||||||||||||||||||||    
T  12236723 cgacacatgttcggcaccgggacacgcctaacctgaggagtgttcgtgcttcataggt 12236780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 272
Target Start/End: Original strand, 19040376 - 19040421
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacac 272  Q
    |||||||||||||||||||| |||||||| ||||| ||| ||||||    
T  19040376 tcacataattcagtgtaattatatgtgtctgtgtcggacacgacac 19040421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 320
Target Start/End: Complemental strand, 5000625 - 5000557
Alignment:
Q  252 tgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 320  Q
    |||||||||| ||| |||||| | ||||||||| ||||||  |||||| ||  ||||||||||||||||    
T  5000625 tgtcggtgtcagacacgacacatatccgacaccaggacacgtctaatccgaagagtgttcgtgcttcat 5000557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 30851630 - 30851674
Alignment:
Q  233 aattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtc 277  Q
    |||||| ||||||| |||||||||||||| ||| |||||||||||    
T  30851630 aattcaatgtaattatatgtgtcggtgtcggacacgacacgtgtc 30851674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 278
Target Start/End: Complemental strand, 31579260 - 31579211
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtcc 278  Q
    |||||||||||||||||||  |||||||||||||| ||| |||||| |||||    
T  31579260 tcacataattcagtgtaat--tatgtgtcggtgtcggacacgacacatgtcc 31579211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 322
Target Start/End: Complemental strand, 34895016 - 34894968
Alignment:
Q  274 tgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||||||| |||||||| ||||| |||| ||||| ||||||||||||    
T  34895016 tgtccgacacagggacacacctaatatgaggagtgtccgtgcttcatag 34894968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 2e-25; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 170 - 322
Target Start/End: Original strand, 18426917 - 18427068
Alignment:
Q  170 ctatgaagcacggatatggacacggacacgccgagaccgctaaaaatttgnnnnnnntcacataattcagtgtaattctatgtgtcggtgtctgacgcga 269  Q
    ||||||||||| |||| ||||||||||||||||| ||| |||| |||||        ||||||||||| |||||||| ||| |||||||||| ||  |||    
T  18426917 ctatgaagcacagatacggacacggacacgccgacaccactaataattt-caaaaaatcacataattcggtgtaattatatatgtcggtgtcggatacga 18427015  T
Q  270 cacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||||||| |||||||||||| |||||||||| ||||| |||| |||||||    
T  18427016 cacgtgtccggcaccgggacacacctaatctgaggagtgtccgtgtttcatag 18427068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 227 - 325
Target Start/End: Complemental strand, 40993370 - 40993272
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggta 325  Q
    |||||||||||||||||||| |||||||||||||| ||| |||||| ||||||||||||||||||  |||||| ||| ||||| | |||||||||||||    
T  40993370 tcacataattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccatgcttcataggta 40993272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 227 - 327
Target Start/End: Original strand, 55401099 - 55401199
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggtaa 326  Q
    |||||||||| |||||||||  | ||||||||||| ||| ||||||||||||||||||| |||||  |||||| ||| ||||| |||||||||||| |||    
T  55401099 tcacataatttagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatagctaa 55401198  T
Q  327 a 327  Q
    |    
T  55401199 a 55401199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 168 - 322
Target Start/End: Original strand, 27505212 - 27505370
Alignment:
Q  168 acctatgaagcacggatatggacacggacacgccgagaccgctaaaaatttgnnnnnnntcacataattcagtgtaattctatgtgtcggtgtc-----t 262  Q
    |||||||||||||||||| ||| ||||||| ||||| || ||||| |||||        |||||||||| |||||||||  | |||||||||||     |    
T  27505212 acctatgaagcacggatacggatacggacaagccgacacagctaataattt-ttaaaaatcacataattaagtgtaattacaagtgtcggtgtcgtgtct 27505310  T
Q  263 gacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||| ||||||||||||||||||||||||   |||||| ||| ||||| ||||||||||||    
T  27505311 gacacgacacgtgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttcatag 27505370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 251 - 325
Target Start/End: Complemental strand, 41961650 - 41961576
Alignment:
Q  251 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggta 325  Q
    |||||||| || ||| ||||||||||||||||| |||||||  |||||| ||||||||| |||||||||||||||    
T  41961650 gtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgagaagtgtccgtgcttcataggta 41961576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 229 - 322
Target Start/End: Original strand, 20503491 - 20503584
Alignment:
Q  229 acataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||||||||||||||  | ||||||||||  ||| |||||| |||| |||||||||||||  |||||| ||| ||||| ||||||||||||    
T  20503491 acataattcagtgtaattacaagtgtcggtgttggacacgacacatgtctgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 20503584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 35222962 - 35223057
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||||||||| ||||||| |||||||||||||| |||  |||||||||| ||||| |||||||   | ||| ||| ||||| ||||||||||||    
T  35222962 tcacataattcaatgtaattatatgtgtcggtgtcggacatgacacgtgtctgacacggggacacgctttatccgaggagtgtccgtgcttcatag 35223057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 227 - 320
Target Start/End: Original strand, 25775533 - 25775624
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 320  Q
    ||||||||||||||||||||  | ||||||||||| ||| || |  |||||||||||| ||||||  |||||| ||| ||||||||||||||||    
T  25775533 tcacataattcagtgtaattacaagtgtcggtgtcggacacgtc--gtgtccgacaccaggacacgcctaatccgaggagtgttcgtgcttcat 25775624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 321
Target Start/End: Complemental strand, 8789585 - 8789489
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcg--acacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcata 321  Q
    ||||||||||| |||||||| |||||||||||||| ||| ||  |||| |||| ||||||| |||||  |||||| ||| ||||| |||||||||||    
T  8789585 tcacataattccgtgtaattatatgtgtcggtgtcggacacgacacacatgtcggacaccgagacacgcctaatccgaggagtgtccgtgcttcata 8789489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 251 - 324
Target Start/End: Original strand, 14209172 - 14209245
Alignment:
Q  251 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    ||||||||||| ||| |||||||||| ||||| ||||| ||| ||||||  |||||||| ||||||||||||||    
T  14209172 gtgtcggtgtcggacacgacacgtgtacgacatcgggatacacctaatccaagaagtgtccgtgcttcataggt 14209245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 250 - 322
Target Start/End: Original strand, 25074841 - 25074914
Alignment:
Q  250 tgtgtcggtgtctgacgcga-cacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||||||||||||| | | | |||||||||||| |||||||| |||||| ||| ||||||||||||||||||    
T  25074841 tgtgtcggtgtctgacaccaacgcgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcatag 25074914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 271 - 324
Target Start/End: Original strand, 40052380 - 40052433
Alignment:
Q  271 acgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    |||||||||||||||||||||  |||||| ||| ||||||||||||||||||||    
T  40052380 acgtgtccgacaccgggacacgcctaatccgaggagtgttcgtgcttcataggt 40052433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 267 - 324
Target Start/End: Complemental strand, 49651771 - 49651714
Alignment:
Q  267 cgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    |||||| | ||||||||||||||||| |||||| ||||||||| ||||||||||||||    
T  49651771 cgacacatatccgacaccgggacacacctaatccgagaagtgtccgtgcttcataggt 49651714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 291
Target Start/End: Original strand, 3631708 - 3631772
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacac 291  Q
    |||||||||||||||||||| |||||| | ||||| ||| |||||| ||||||||||| ||||||    
T  3631708 tcacataattcagtgtaattatatgtgccagtgtcggacacgacacatgtccgacaccaggacac 3631772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 291
Target Start/End: Original strand, 10954976 - 10955040
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacac 291  Q
    |||||||||||||||||||   | ||||||||||| ||| ||||||||||||||||| |||||||    
T  10954976 tcacataattcagtgtaatcacaagtgtcggtgtcggacacgacacgtgtccgacactgggacac 10955040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 11252002 - 11252095
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||||||||||||||||  ||||||||||||| ||| | ||||||||||| || ||| ||||  |||||| ||| |||||  |||||||||||    
T  11252002 tcacataattcagtgtaatt--atgtgtcggtgtcagacacaacacgtgtccggcatcggaacacgcctaatccgaggagtgtctgtgcttcatag 11252095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 14216957 - 14217021
Alignment:
Q  257 gtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcata 321  Q
    ||||| ||| |||||||||| |||||| |||||||| |||||| ||||||||| |||||||||||    
T  14216957 gtgtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttcata 14217021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 14223086 - 14223150
Alignment:
Q  257 gtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcata 321  Q
    ||||| ||| |||||||||| |||||| |||||||| |||||| ||||||||| |||||||||||    
T  14223086 gtgtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttcata 14223150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 227 - 318
Target Start/End: Original strand, 25093526 - 25093617
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttc 318  Q
    ||||| |||||||||||||| |||||||||||||| ||| | |||| |||||||||| |   |||  |||||||||  ||||||||||||||    
T  25093526 tcacacaattcagtgtaattatatgtgtcggtgtcggacacaacacatgtccgacactgaagcacttctaatctgaagagtgttcgtgcttc 25093617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 322
Target Start/End: Original strand, 17276792 - 17276846
Alignment:
Q  268 gacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||||||||||||||| ||| || |||||| ||||||||| ||||||||||||    
T  17276792 gacacgtgtccgacaccgagacgcacctaatccgagaagtgtccgtgcttcatag 17276846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 251 - 320
Target Start/End: Complemental strand, 4987291 - 4987222
Alignment:
Q  251 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 320  Q
    ||||||||||  ||| |||||||||||||||||||||||||  |||||| ||| ||||| ||| ||||||    
T  4987291 gtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtacttcat 4987222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 23870650 - 23870601
Alignment:
Q  170 ctatgaagcacggatatggacacggacacgccgagaccgctaaaaatttg 219  Q
    |||||||||||||||| ||||||||||||| ||| |||||||| ||||||    
T  23870650 ctatgaagcacggatacggacacggacacgtcgacaccgctaataatttg 23870601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 227 - 292
Target Start/End: Original strand, 45451577 - 45451642
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacaca 292  Q
    ||||||| |||||| ||||  |||||||||||||| ||| |||||| |||||||||||| ||||||    
T  45451577 tcacatacttcagtataataatatgtgtcggtgtcggacacgacacatgtccgacaccgagacaca 45451642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 320
Target Start/End: Original strand, 28918025 - 28918120
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtc--tgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 320  Q
    ||||||||||||||||||||  | |||||||||||   ||| ||||||||||||||||| |||||||  ||||||  || ||||| | ||||||||    
T  28918025 tcacataattcagtgtaattacaagtgtcggtgtcgtggacacgacacgtgtccgacactgggacacgcctaatccaaggagtgtccctgcttcat 28918120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 320
Target Start/End: Original strand, 29508472 - 29508567
Alignment:
Q  231 ataattcagtgtaattctatgtgtcg------gtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 320  Q
    |||||||||||||||| |||||||||      ||||| ||| ||||||  |||||||||||||||||  ||||||  |||||||| ||||||||||    
T  29508472 ataattcagtgtaattatatgtgtcgatgttggtgtcggacacgacacacgtccgacaccgggacacgtctaatccaagaagtgtccgtgcttcat 29508567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 282
Target Start/End: Original strand, 2941582 - 2941637
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgaca 282  Q
    ||||| ||| |||||||||| |||||||||||||| ||| ||||||||||| ||||    
T  2941582 tcacaaaatacagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgaca 2941637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 278
Target Start/End: Original strand, 3865698 - 3865749
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtcc 278  Q
    |||||||||||||| |||||  | ||||||||||||||| ||||||||||||    
T  3865698 tcacataattcagtataattacaagtgtcggtgtctgacacgacacgtgtcc 3865749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 13845560 - 13845465
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||| ||| |||||||||| |||||||||||||| ||| ||| ||||||| ||||| | |||||  || |||  || ||||| ||||||||||||    
T  13845560 tcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgagacgtgtctgacacggagacacgccttatccaaggagtgtccgtgcttcatag 13845465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 322
Target Start/End: Original strand, 23657767 - 23657858
Alignment:
Q  231 ataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||||||||||||| ||  | |||||||| |||  ||||  ||||||| ||||||||||| |||||| || |||||| ||| ||||||||    
T  23657767 ataattcagtgtaattataaatatcggtgtcggacatgacatttgtccgataccgggacacacctaatccgaaaagtgtccgtacttcatag 23657858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 25064966 - 25065037
Alignment:
Q  251 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||| |||||| ||| ||||||||||| ||||||||||||| | | ||| ||| |||||||||||| |||||    
T  25064966 gtgttggtgtcggacacgacacgtgtctgacaccgggacacggtttatccgaggagtgttcgtgctccatag 25065037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 261
Target Start/End: Original strand, 7928474 - 7928508
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtc 261  Q
    |||||||||||||||||||| ||||||||||||||    
T  7928474 tcacataattcagtgtaattatatgtgtcggtgtc 7928508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 322
Target Start/End: Complemental strand, 8101946 - 8101892
Alignment:
Q  268 gacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||||||| ||||| || ||||  |||||||||| ||||||||||||||||||    
T  8101946 gacacgtgtcggacactggtacacgtctaatctgaggagtgttcgtgcttcatag 8101892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 322
Target Start/End: Original strand, 11610578 - 11610628
Alignment:
Q  272 cgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||||||| ||||||||  |||||||||| ||||| ||||||||||||    
T  11610578 cgtgtccgacatcgggacacgcctaatctgaggagtgtccgtgcttcatag 11610628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 322
Target Start/End: Complemental strand, 34185106 - 34185052
Alignment:
Q  268 gacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||| |||||||||||||||||||  |||||| ||| ||||| ||||||||||||    
T  34185106 gacatgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 34185052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 324
Target Start/End: Original strand, 52369851 - 52369908
Alignment:
Q  267 cgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    |||| ||||||| ||||||||||||| ||| || ||| ||||| ||||||||||||||    
T  52369851 cgacgcgtgtccaacaccgggacacacctattccgaggagtgtccgtgcttcataggt 52369908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 323
Target Start/End: Original strand, 7171529 - 7171621
Alignment:
Q  231 ataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatagg 323  Q
    ||||||| ||||||||  | |||| |||||| ||| ||||||||||||||||||| |||||  ||||||  || |||||   |||||||||||    
T  7171529 ataattcggtgtaattacaagtgttggtgtcggacacgacacgtgtccgacaccgcgacacgcctaatccaaggagtgtatatgcttcatagg 7171621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 322
Target Start/End: Original strand, 8903514 - 8903554
Alignment:
Q  282 accgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||||||| |||||| ||| ||||||||||||||||||    
T  8903514 accgggacacacctaatccgaggagtgttcgtgcttcatag 8903554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 14832158 - 14832198
Alignment:
Q  251 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacac 291  Q
    |||||||| || ||| |||||||||||||||||||||||||    
T  14832158 gtgtcggtatcggacacgacacgtgtccgacaccgggacac 14832198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 170 - 198
Target Start/End: Complemental strand, 15796409 - 15796381
Alignment:
Q  170 ctatgaagcacggatatggacacggacac 198  Q
    |||||||||||||||||||||||||||||    
T  15796409 ctatgaagcacggatatggacacggacac 15796381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 257 - 317
Target Start/End: Complemental strand, 16192727 - 16192667
Alignment:
Q  257 gtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgctt 317  Q
    ||||| ||| ||||||||||| |||||||||||| | ||||| |||| |||||| ||||||    
T  16192727 gtgtcagacacgacacgtgtctgacaccgggacatacctaatatgaggagtgtttgtgctt 16192667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 277 - 321
Target Start/End: Original strand, 25211604 - 25211648
Alignment:
Q  277 ccgacaccgggacacagctaatctgagaagtgttcgtgcttcata 321  Q
    |||||||| ||||||  ||||||||||||||||| ||||||||||    
T  25211604 ccgacaccaggacacgcctaatctgagaagtgtttgtgcttcata 25211648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 2e-22; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 170 - 322
Target Start/End: Original strand, 42893328 - 42893479
Alignment:
Q  170 ctatgaagcacggatatggacacggacacgccgagaccgctaaaaatttgnnnnnnntcacataattcagtgtaattctatgtgtcggtgtctgacgcga 269  Q
    ||||||||||||||||||||||||||||| |||| || ||||| ||||||       ||||||||| ||||||||||  | ||||||||||| ||| | |    
T  42893328 ctatgaagcacggatatggacacggacacaccgacacagctaataatttgaaaaaa-tcacataatccagtgtaattacaagtgtcggtgtcagacacaa 42893426  T
Q  270 cacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||||||||||| ||||||  ||||| |||| ||||| | ||||||||||    
T  42893427 cacgtgtccgacaccaggacacgcctaatatgaggagtgtccatgcttcatag 42893479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 227 - 324
Target Start/End: Original strand, 43564905 - 43565002
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    |||||||||| ||||||||| || ||||||||||| ||| ||||| ||||||||| |||||||||  |||||| ||||||||| ||||||||||||||    
T  43564905 tcacataatttagtgtaattataagtgtcggtgtcggacacgacatgtgtccgacgccgggacacgcctaatccgagaagtgtccgtgcttcataggt 43565002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 227 - 320
Target Start/End: Complemental strand, 21191091 - 21190998
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 320  Q
    ||||||||||||||||||||  | ||||||||||| ||| | ||||||||||||| |||||||||  |||||| ||| ||||| ||||||||||    
T  21191091 tcacataattcagtgtaattacaagtgtcggtgtcggacacaacacgtgtccgactccgggacacgcctaatccgaggagtgtccgtgcttcat 21190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 21576780 - 21576685
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||||||||||||||||  | |||||| |||| ||| ||||||||||| ||||| |||||||  |||||| ||| ||||| ||||||||||||    
T  21576780 tcacataattcagtgtaattacaagtgtcgatgtcggacacgacacgtgtctgacactgggacacgcctaatccgaggagtgtccgtgcttcatag 21576685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 320
Target Start/End: Complemental strand, 30502423 - 30502330
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 320  Q
    |||| ||||||||||||||| |||||||||||||| ||| |||||| |||||||||| ||||||   ||||||  || | ||||||||||||||    
T  30502423 tcacttaattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacactgggacatgcctaatccaaggattgttcgtgcttcat 30502330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 320
Target Start/End: Complemental strand, 30542766 - 30542673
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 320  Q
    |||| ||||||||||||||| |||||||||||||| ||| |||||| |||||||||| ||||||   ||||||  || | ||||||||||||||    
T  30542766 tcacttaattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacactgggacatgcctaatccaaggattgttcgtgcttcat 30542673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 228 - 323
Target Start/End: Original strand, 14873542 - 14873642
Alignment:
Q  228 cacataattcagtgtaattctatgtgtcggtgtct-----gacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||||| ||||||||| ||||||||||||||      ||||| |||||||||| ||||||||||||  |||||| ||| ||||| ||||||||||||    
T  14873542 cacataatttagtgtaattatatgtgtcggtgtcatgtcggacgcaacacgtgtccaacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 14873641  T
Q  323 g 323  Q
    |    
T  14873642 g 14873642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 232 - 309
Target Start/End: Original strand, 26312798 - 26312875
Alignment:
Q  232 taattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgt 309  Q
    ||||||||||||||| ||||| |||||||| ||| ||| ||||||| |||||| ||||||| |||||| ||| |||||    
T  26312798 taattcagtgtaattatatgtatcggtgtcggacacgatacgtgtctgacaccaggacacacctaatccgaggagtgt 26312875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 230 - 318
Target Start/End: Complemental strand, 30099070 - 30098982
Alignment:
Q  230 cataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttc 318  Q
    |||||||| |||||||| |||||||||||||| ||  ||||||||||| ||||| |||||||  || |||  || ||||||||||||||    
T  30099070 cataattctgtgtaattatatgtgtcggtgtcggatacgacacgtgtctgacacggggacacgccttatccaaggagtgttcgtgcttc 30098982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 227 - 324
Target Start/End: Complemental strand, 28588709 - 28588612
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    |||||||||||||||||||| || ||||||||||| ||| |||||| | || |||||| ||||||   ||||| ||  ||||| | ||||||||||||    
T  28588709 tcacataattcagtgtaattataggtgtcggtgtcggacacgacacatatctgacaccaggacacgcttaatccgaagagtgtccatgcttcataggt 28588612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 21542089 - 21542129
Alignment:
Q  251 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacac 291  Q
    ||||||||||| ||| |||||||||||||||||||||||||    
T  21542089 gtgtcggtgtcggacacgacacgtgtccgacaccgggacac 21542129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 7677764 - 7677835
Alignment:
Q  251 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||||||||||| || ||| ||||||||||||||||||  |||||| ||| || ||  |||||||||||    
T  7677764 gtgtcggtgtctgacacgtcacatgtccgacaccgggacacgcctaatccgaggagagtcggtgcttcatag 7677835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 322
Target Start/End: Complemental strand, 32766943 - 32766872
Alignment:
Q  251 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||||||||  |  |||||||||||||||||| ||| ||  |||||||||| ||||| ||||||||||||    
T  32766943 gtgtcggtgtcgaaaacgacacgtgtccgacaccaggatacgtctaatctgaggagtgtccgtgcttcatag 32766872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 319
Target Start/End: Complemental strand, 39268612 - 39268541
Alignment:
Q  248 tatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttca 319  Q
    |||||||||||||  ||| ||||| ||||||||||| |||||||  |||||| ||| ||||| |||||||||    
T  39268612 tatgtgtcggtgttggacacgacatgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 39268541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 39698600 - 39698671
Alignment:
Q  251 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||||||| ||| ||||| || |||||||||| |||||  |||||| ||| ||||| ||||||||||||    
T  39698600 gtgtcggtgtcggacacgacatgtatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 39698671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 323
Target Start/End: Original strand, 27932261 - 27932355
Alignment:
Q  229 acataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatagg 323  Q
    ||||||||||||||||||  |  | | |||||| ||| ||||||||||| |||||| ||||||  |||||  ||| |||||| ||||||||||||    
T  27932261 acataattcagtgtaattacaaatcttggtgtcggacacgacacgtgtcggacaccaggacacgcctaattcgaggagtgtttgtgcttcatagg 27932355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 324
Target Start/End: Complemental strand, 38464361 - 38464311
Alignment:
Q  274 tgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    ||||||||||||||||||| |||||| ||| |||||  |||||||||||||    
T  38464361 tgtccgacaccgggacacacctaatccgaggagtgtctgtgcttcataggt 38464311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 322
Target Start/End: Original strand, 30098391 - 30098456
Alignment:
Q  257 gtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||| ||| ||||||||||| |||||| ||||||| |||||| ||| | ||| ||||||||||||    
T  30098391 gtgtcggacacgacacgtgtcagacaccaggacacacctaatccgaggaatgtccgtgcttcatag 30098456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 324
Target Start/End: Complemental strand, 32630766 - 32630673
Alignment:
Q  231 ataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    |||||||| ||||||| |||||||| ||||| ||  ||||||||||||||||  | |||||| |||||  ||| |||||   ||||||||||||    
T  32630766 ataattcaatgtaattatatgtgtcagtgtcggatacgacacgtgtccgacattgagacacacctaattcgaggagtgtctatgcttcataggt 32630673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 322
Target Start/End: Complemental strand, 19820376 - 19820328
Alignment:
Q  274 tgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||||||||||||||  |||||| ||| ||||| ||||||||||||    
T  19820376 tgtccgacaccgggacacgcctaatcagaggagtgtccgtgcttcatag 19820328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 21522809 - 21522849
Alignment:
Q  251 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacac 291  Q
    ||||||||||| ||| ||||||||||||| |||||||||||    
T  21522809 gtgtcggtgtcggacacgacacgtgtccggcaccgggacac 21522849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 21533375 - 21533415
Alignment:
Q  251 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacac 291  Q
    ||||||||||| ||| ||||||||||||| |||||||||||    
T  21533375 gtgtcggtgtcggacacgacacgtgtccggcaccgggacac 21533415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 1e-20; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 598232 - 598327
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||| ||||| | ||||||| || ||||||||||| ||| |||||||||||||||||||||||||  |||||| ||||||||| ||||||||||||    
T  598232 tcacgtaattaaatgtaattgtaagtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 598327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 227 - 321
Target Start/End: Complemental strand, 32287498 - 32287404
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcata 321  Q
    ||||||||||||||| || | |||||||||||||| |||  |||| |||||||||||||||||||| |||||| ||| ||||| |||||||||||    
T  32287498 tcacataattcagtgcaagtatatgtgtcggtgtcggacatgacaagtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 32287404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 229 - 322
Target Start/End: Original strand, 21880178 - 21880271
Alignment:
Q  229 acataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||||||||||||||  | ||||||||||| ||| |||||| ||||||||||| ||||||  |||||| ||||||||| ||||||||||||    
T  21880178 acataattcagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccaggacacgcctaatccgagaagtgtccgtgcttcatag 21880271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 15680833 - 15680929
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatagg 323  Q
    |||||||||| ||||||||| || ||||||||||| ||| ||||||||||||||||||| |||||  |||||  ||| ||||| |||||||||||||    
T  15680833 tcacataatttagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgtctaattcgaggagtgtccgtgcttcatagg 15680929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 1401049 - 1401143
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatagg 323  Q
    |||||||||||||||||||| || || |||||||| ||| |||||  ||||||||| ||||||||| |||||||||| ||||| | |||||||||||    
T  1401049 tcacataattcagtgtaattataagtatcggtgtccgacacgaca--tgtccgacatcgggacacacctaatctgaggagtgtccatgcttcatagg 1401143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 257 - 324
Target Start/End: Complemental strand, 5409836 - 5409769
Alignment:
Q  257 gtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    ||||| ||| |||||||||||||||||||||||||  |||||| ||| ||||| ||||||||||||||    
T  5409836 gtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcataggt 5409769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 229 - 328
Target Start/End: Original strand, 5835273 - 5835372
Alignment:
Q  229 acataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggtaaac 328  Q
    |||||||||||||||||| |||||||||||||| |||  |||| ||||| || ||||||||||   ||||| ||||||||||  ||||| |||| |||||    
T  5835273 acataattcagtgtaattatatgtgtcggtgtcagacatgacatgtgtctgataccgggacacgcttaatccgagaagtgtttttgctttatagttaaac 5835372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 251 - 321
Target Start/End: Original strand, 32308179 - 32308249
Alignment:
Q  251 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcata 321  Q
    ||||||||||  ||| |||||| |||||||||||| ||||||||||||| ||| ||||||| |||||||||    
T  32308179 gtgtcggtgttggacacgacacatgtccgacaccgagacacagctaatccgaggagtgttcatgcttcata 32308249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 324
Target Start/End: Original strand, 33994236 - 33994333
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    ||||||||||||||| ||||  | ||||||||||| ||| |||||| ||||| |||||| |||||  ||||||  || |||||||||| |||||||||    
T  33994236 tcacataattcagtgcaattacaagtgtcggtgtcagacacgacacatgtccaacaccgagacacgcctaatccaaggagtgttcgtgtttcataggt 33994333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 231 - 322
Target Start/End: Original strand, 21864836 - 21864927
Alignment:
Q  231 ataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||| |||||||||  | |||||| |||| ||| |||||||||||||||||||||||||  |||||  ||| |||||  |||||||||||    
T  21864836 ataatttagtgtaattacaagtgtcgctgtcggacacgacacgtgtccgacaccgggacacgtctaattcgaggagtgtctgtgcttcatag 21864927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 230 - 321
Target Start/End: Original strand, 22484052 - 22484143
Alignment:
Q  230 cataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcata 321  Q
    ||||||||||| ||||| |||||||||||||| |||  ||||| ||||||||| || ||||   || ||| ||||||||| |||||||||||    
T  22484052 cataattcagtataattatatgtgtcggtgtcagacatgacacatgtccgacatcgagacatgtctgatccgagaagtgtccgtgcttcata 22484143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 24339701 - 24339772
Alignment:
Q  251 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||||||| ||| |||||||| ||||||||||||||||  |||||| ||| ||||  ||||||||||||    
T  24339701 gtgtcggtgtcggacacgacacgtatccgacaccgggacacgcctaatccgaggagtgcccgtgcttcatag 24339772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 321
Target Start/End: Original strand, 20549815 - 20549909
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcata 321  Q
    |||| ||||||||||||||| |||||||||||||| ||| | |||| |||||||||  | |||||  |||||| ||| ||||  |||||||||||    
T  20549815 tcacgtaattcagtgtaattatatgtgtcggtgtcggacacaacacatgtccgacaatgagacacgcctaatccgaggagtgcccgtgcttcata 20549909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 322
Target Start/End: Complemental strand, 32094020 - 32093954
Alignment:
Q  257 gtgtctgacgcgacacgtgtccgacacc-gggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||| ||| |||||||||||||||||| |||||||  |||||| ||| ||||||||||||||||||    
T  32094020 gtgtcggacacgacacgtgtccgacaccggggacacgcctaatccgaggagtgttcgtgcttcatag 32093954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 250 - 322
Target Start/End: Complemental strand, 7133285 - 7133212
Alignment:
Q  250 tgtgtcggtgtctgacgc-gacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||||||||| ||| | ||| |||||||||||| |||||||| |||||||||| || || ||||||||||||    
T  7133285 tgtgtcggtgtcggacaccgacgcgtgtccgacactgggacacacctaatctgaggagcgtccgtgcttcatag 7133212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 227 - 272
Target Start/End: Original strand, 9482958 - 9483003
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacac 272  Q
    ||||| |||||||||||||| |||||||||||||| ||||||||||    
T  9482958 tcacacaattcagtgtaattatatgtgtcggtgtcggacgcgacac 9483003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 257 - 322
Target Start/End: Complemental strand, 43027469 - 43027404
Alignment:
Q  257 gtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||| ||| |||||||||||||||||||||||||  |||||| ||  ||||| ||||||||||||    
T  43027469 gtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgatgagtgtccgtgcttcatag 43027404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 27093448 - 27093376
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatc 299  Q
    |||||||||| ||||||||| |||| ||||||||  ||| ||||| |||||||||||  ||||||| ||||||    
T  27093448 tcacataatttagtgtaattatatgcgtcggtgttagacacgacatgtgtccgacactaggacacacctaatc 27093376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 27184853 - 27184925
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatc 299  Q
    |||||||||| ||||||||| |||| ||||||||  ||| ||||| |||||||||||  ||||||| ||||||    
T  27184853 tcacataatttagtgtaattatatgcgtcggtgttagacacgacatgtgtccgacactaggacacacctaatc 27184925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 324
Target Start/End: Original strand, 9778571 - 9778626
Alignment:
Q  269 acacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    |||||||||||||||||||||||  ||||||  || ||||| ||||||||||||||    
T  9778571 acacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcttcataggt 9778626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 18213068 - 18212973
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||||||| ||||||||| |||||||||||||| ||| |||| | | || ||||| |||||||  || ||| ||| |||||  |||||||||||    
T  18213068 tcacataatttagtgtaattatatgtgtcggtgtcggacacgacccctttctgacacggggacacgccttatccgaggagtgtctgtgcttcatag 18212973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 42720925 - 42720830
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||||||| | ||||||| |||||||| ||||||||| | ||| |||| | ||||||| ||||  |||||  || ||||||| |||||||||||    
T  42720925 tcacataattaaatgtaattatatgtgtcagtgtctgacacaacatgtgtacaacaccggaacacgtctaattcgataagtgtttgtgcttcatag 42720830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 261
Target Start/End: Original strand, 640137 - 640171
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtc 261  Q
    |||||||||||||||||||| ||||||||||||||    
T  640137 tcacataattcagtgtaattatatgtgtcggtgtc 640171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 322
Target Start/End: Original strand, 17852065 - 17852119
Alignment:
Q  268 gacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||||||||||||||| |||||| |||||  ||| ||||| ||||||||||||    
T  17852065 gacacgtgtccgacaccgagacacacctaattcgaggagtgtccgtgcttcatag 17852119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 261
Target Start/End: Complemental strand, 22602745 - 22602711
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtc 261  Q
    |||||||||||||||||||| ||||||||||||||    
T  22602745 tcacataattcagtgtaattatatgtgtcggtgtc 22602711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 320
Target Start/End: Complemental strand, 26033461 - 26033392
Alignment:
Q  251 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 320  Q
    ||||||||||| |||  ||||||||||||| |||| |||||| |||||| ||| ||||| |||| |||||    
T  26033461 gtgtcggtgtcagacatgacacgtgtccgataccgcgacacacctaatccgaggagtgtccgtgtttcat 26033392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 20545326 - 20545278
Alignment:
Q  171 tatgaagcacggatatggacacggacacgccgagaccgctaaaaatttg 219  Q
    ||||||||||||||| ||| ||||||||||| | |||||||| ||||||    
T  20545326 tatgaagcacggatacggatacggacacgccaacaccgctaataatttg 20545278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 234 - 322
Target Start/End: Original strand, 24105709 - 24105797
Alignment:
Q  234 attcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||||||||||  | ||||||| ||| | | | ||| |||||||||||||||||||  |||| | ||| |||||| |||||||||||    
T  24105709 attcagtgtaattacaagtgtcggagtcgggcacaacatgtgtccgacaccgggacacgcctaacccgaggagtgtttgtgcttcatag 24105797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 291
Target Start/End: Original strand, 39138468 - 39138532
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacac 291  Q
    |||||||||||||||||||| ||| |||||||||| ||| ||| || ||||  |||| |||||||    
T  39138468 tcacataattcagtgtaattatatatgtcggtgtcggacacgatacatgtctaacacggggacac 39138532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 227 - 321
Target Start/End: Complemental strand, 497 - 403
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcata 321  Q
    ||||| ||||||||||||||  | ||||||||||| ||| |||| ||||||||||||||||||||| |||||| ||| ||||| |||||||||||    
T  497 tcacaaaattcagtgtaattacaagtgtcggtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 227 - 320
Target Start/End: Complemental strand, 2438754 - 2438661
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 320  Q
    ||||||||||||||||||||  | ||||||||||| ||| |||||| ||||||||||||||||||  |||||| ||| ||||| ||||||||||    
T  2438754 tcacataattcagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 2438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 229 - 322
Target Start/End: Complemental strand, 18841046 - 18840953
Alignment:
Q  229 acataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||||| |||||||||  | ||||||||||| ||| |||||| ||||||||||||||||||| |||||| ||| ||||| ||||||||||||    
T  18841046 acataattaagtgtaattacaagtgtcggtgtcagacacgacacatgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 18840953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 321
Target Start/End: Original strand, 28596493 - 28596587
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcata 321  Q
    |||||||| ||||||||||| || ||||||||||| ||| |||||||||||||||||  ||||||  |||||| ||| ||||| |||||||||||    
T  28596493 tcacataagtcagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacactcggacactcctaatccgaggagtgtccgtgcttcata 28596587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 30404885 - 30404790
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||||||||||||||||  | ||||||| ||| ||| |||||| ||||||||||| |||||   ||||||||||||| ||| |||||||||||    
T  30404885 tcacataattcagtgtaattacaagtgtcggcgtcggacacgacacatgtccgacaccaggacatgcctaatctgagaagcgtttgtgcttcatag 30404790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 233 - 323
Target Start/End: Original strand, 15972903 - 15972993
Alignment:
Q  233 aattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatagg 323  Q
    ||||||||||||||  | ||||||||||| ||| ||||||||||||||| |||||||||| |||||| ||  | ||| |||||||||||||    
T  15972903 aattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacgccgggacacacctaatccgaagaatgtccgtgcttcatagg 15972993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 291
Target Start/End: Original strand, 5367216 - 5367280
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacac 291  Q
    |||||||||||||||||||| |||||||||||||| ||| |||||| | |||||| |||||||||    
T  5367216 tcacataattcagtgtaattatatgtgtcggtgtcggacacgacacatatccgactccgggacac 5367280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 37559001 - 37559096
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||||||||| |||||||  | ||||||||||| |||  ||||||||||||||||||| ||||   ||||| ||| ||||| ||||||||||||    
T  37559001 tcacataattcaatgtaattacaagtgtcggtgtcggacttgacacgtgtccgacaccggtacacgcttaatccgaggagtgtccgtgcttcatag 37559096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 229 - 323
Target Start/End: Complemental strand, 34994015 - 34993921
Alignment:
Q  229 acataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatagg 323  Q
    |||||||||| ||||||| |||||||| |||||  || ||||| ||||||||||| |||||||  |||||   || |||||||||||||||||||    
T  34994015 acataattcaatgtaattatatgtgtcagtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgcttcatagg 34993921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 251 - 324
Target Start/End: Original strand, 37419802 - 37419875
Alignment:
Q  251 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    ||||||||||| ||| |||  ||||||||||||||||||||  |||||| ||| ||||| ||||||||||||||    
T  37419802 gtgtcggtgtcggacacgatgcgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcataggt 37419875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 283
Target Start/End: Complemental strand, 20242762 - 20242706
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacac 283  Q
    |||||||||||||||||||| |||||||||||||| ||| | ||||||||| |||||    
T  20242762 tcacataattcagtgtaattatatgtgtcggtgtcggacacaacacgtgtctgacac 20242706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 35056927 - 35056998
Alignment:
Q  251 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||||||| ||| ||||||||||||||||| |  ||||  |||||||||| ||||| ||||||||||||    
T  35056927 gtgtcggtgtcggacacgacacgtgtccgacacggaaacacgcctaatctgaggagtgtccgtgcttcatag 35056998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 38117194 - 38117099
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||| ||| ||||||||  | |||| |||||| ||| | |||||||||||||||||||||||  |||||| |||  |||| ||||||||||||    
T  38117194 tcacatacttcggtgtaattacaagtgttggtgtcggacacaacacgtgtccgacaccgggacacgcctaatccgaggggtgtccgtgcttcatag 38117099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 322
Target Start/End: Original strand, 26769571 - 26769641
Alignment:
Q  252 tgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||| || ||| ||||||||||||||||| |||||||  |||||| ||| ||||| ||||||||||||    
T  26769571 tgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttcatag 26769641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 313
Target Start/End: Complemental strand, 29176528 - 29176442
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgt 313  Q
    |||||||||||||||||||| || |||| |||||  ||| || ||| |||||||||| | |||||| ||||||  ||||||||||||    
T  29176528 tcacataattcagtgtaattataagtgttggtgttggacacggcacatgtccgacactgagacacacctaatccaagaagtgttcgt 29176442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 50 - 115
Target Start/End: Original strand, 39983997 - 39984062
Alignment:
Q  50 acctcagcctgaggtagcagagtaacttgtgtataaacctcatcattctccttgttggcctgttaa 115  Q
    ||||| ||||| || |||| || ||| ||||| |||||||||||||||||||| ||||||||||||    
T  39983997 acctctgcctgtggaagcaaagcaacctgtgtgtaaacctcatcattctccttattggcctgttaa 39984062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 269 - 322
Target Start/End: Complemental strand, 42511375 - 42511322
Alignment:
Q  269 acacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||||||||||| ||||||| ||||||| ||| ||||| ||||||||||||    
T  42511375 acacgtgtccgacacagggacacggctaatccgaggagtgtccgtgcttcatag 42511322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 291
Target Start/End: Original strand, 5040758 - 5040822
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacac 291  Q
    |||||||||||| |||||||  | ||||||||||| ||| ||||| ||||||||| |||||||||    
T  5040758 tcacataattcaatgtaattacaagtgtcggtgtcggacacgacatgtgtccgacgccgggacac 5040822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 322
Target Start/End: Complemental strand, 21782816 - 21782744
Alignment:
Q  250 tgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||| |||||| | | |||||||||||| ||||||||||||  |||||||| | ||||| ||||||||||||    
T  21782816 tgtgttggtgtcaggcacgacacgtgtccaacaccgggacacgtctaatctgtggagtgtccgtgcttcatag 21782744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 31808101 - 31808173
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatc 299  Q
    |||||||||||||||||||| |||||||| ||||   || |||||| ||| ||||||| ||||||| ||||||    
T  31808101 tcacataattcagtgtaattatatgtgtcagtgttgaacacgacacatgttcgacacctggacacacctaatc 31808173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 291
Target Start/End: Complemental strand, 37411279 - 37411215
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacac 291  Q
    |||||||||||||||| ||| ||||||||| ||||  || |||| |||||||||||| |||||||    
T  37411279 tcacataattcagtgtgattatatgtgtcgatgtcgaacacgacgcgtgtccgacactgggacac 37411215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 24009320 - 24009414
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||| ||| |||||||| | |||||||||||||| ||| ||||||||||| ||||| |||||||  || |||  || ||||| ||||||||||||    
T  24009320 tcacaaaatgcagtgtaaat-tatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 24009414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 321
Target Start/End: Complemental strand, 5891785 - 5891715
Alignment:
Q  251 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcata 321  Q
    |||||||||| |||| ||||||||||| |||| || |||||  ||||| | ||||||||||||| ||||||    
T  5891785 gtgtcggtgtttgacacgacacgtgtcagacatcgagacacgtctaatttaagaagtgttcgtgtttcata 5891715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 256 - 322
Target Start/End: Complemental strand, 11223858 - 11223793
Alignment:
Q  256 ggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||| ||| |||||| |||| |||||||||||||  |||||||||| ||||| ||||||||||||    
T  11223858 ggtgtcggacacgacac-tgtctgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 11223793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 322
Target Start/End: Original strand, 19980740 - 19980794
Alignment:
Q  268 gacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||| ||||||||| || |||||| |||||| ||||||||||| ||||||||||    
T  19980740 gacacatgtccgacatcgagacacacctaatccgagaagtgttcatgcttcatag 19980794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 27084229 - 27084279
Alignment:
Q  169 cctatgaagcacggatatggacacggacacgccgagaccgctaaaaatttg 219  Q
    ||||||||||||||||| |||||||||||| |||| || ||||| ||||||    
T  27084229 cctatgaagcacggatacggacacggacactccgacactgctaataatttg 27084279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 322
Target Start/End: Complemental strand, 24975304 - 24975255
Alignment:
Q  273 gtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||||||| |||||| | |||||||||| ||||| ||||||||||||    
T  24975304 gtgtccgacactgggacaaatctaatctgaggagtgtccgtgcttcatag 24975255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 198
Target Start/End: Complemental strand, 27447121 - 27447088
Alignment:
Q  165 aagacctatgaagcacggatatggacacggacac 198  Q
    ||||||||||||||||||||| ||||||||||||    
T  27447121 aagacctatgaagcacggatacggacacggacac 27447088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 291
Target Start/End: Original strand, 41843465 - 41843534
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgt-----ctgacgcgacacgtgtccgacaccgggacac 291  Q
    ||||||||||| || ||||| |||||||||||||     | ||||||||||||||||||||| |||||||    
T  41843465 tcacataattcggtataattatatgtgtcggtgttgtgtcggacgcgacacgtgtccgacacggggacac 41843534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 23718050 - 23718082
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtg 259  Q
    |||||||||||||||||||| ||||||||||||    
T  23718050 tcacataattcagtgtaattatatgtgtcggtg 23718082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 24105722 - 24105754
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtg 259  Q
    |||||||||||||||||||| ||||||||||||    
T  24105722 tcacataattcagtgtaattatatgtgtcggtg 24105754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 233 - 324
Target Start/End: Original strand, 37497150 - 37497242
Alignment:
Q  233 aattcagtgtaattctatgtgtcggtgtctgacgc-gacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    |||||| ||||||  ||| |||||||||| ||| | ||||| ||| || ||||||||||  |||||||  |||||||| ||||||||||||||    
T  37497150 aattcaatgtaataatatctgtcggtgtcagacaccgacacatgttcggcaccgggacatggctaatcccagaagtgtccgtgcttcataggt 37497242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 229 - 319
Target Start/End: Original strand, 70304 - 70394
Alignment:
Q  229 acataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttca 319  Q
    |||||||||||||||||| || ||||||||||| ||| |||||||||||||||||| |||||   |||||| ||  |||||||||||||||    
T  70304 acataattcagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacaccaggacatgcctaatccgatgagtgttcgtgcttca 70394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 5e-17; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 227 - 320
Target Start/End: Original strand, 3025575 - 3025668
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 320  Q
    |||||||||||||||||||| || ||||| ||||| ||| ||||||||||| ||||| | ||||| ||||||| ||| ||||| ||||||||||    
T  3025575 tcacataattcagtgtaattataggtgtcagtgtcggacacgacacgtgtctgacactgtgacacggctaatccgaggagtgtccgtgcttcat 3025668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 177 - 324
Target Start/End: Original strand, 5813567 - 5813713
Alignment:
Q  177 gcacggatatggacacggacacgccgagaccgctaaaaatttgnnnnnnntcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgt 276  Q
    ||||||||| ||||||||||||||||| || ||||| ||||||       ||||||| || ||||||| |  | ||||||||||| ||| ||||||||||    
T  5813567 gcacggatacggacacggacacgccgacacagctaataatttgaaaaag-tcacatattttagtgtaaatacaagtgtcggtgtcggacacgacacgtgt 5813665  T
Q  277 ccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    |||||||||||||||  |||||  ||| ||||| |||||||| |||||    
T  5813666 ccgacaccgggacacgcctaattggaggagtgtccgtgcttcgtaggt 5813713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 251 - 324
Target Start/End: Complemental strand, 29510304 - 29510231
Alignment:
Q  251 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    ||||||||||| ||| |||| ||||||||||||||||||||| |||||| ||| ||||| ||||||||||||||    
T  29510304 gtgtcggtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcataggt 29510231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 227 - 291
Target Start/End: Complemental strand, 20679430 - 20679366
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacac 291  Q
    ||||||| |||||||||||| || ||||||||||| ||||| |||||||||||||||||||||||    
T  20679430 tcacatagttcagtgtaattataagtgtcggtgtcagacgcaacacgtgtccgacaccgggacac 20679366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 235 - 290
Target Start/End: Complemental strand, 926815 - 926760
Alignment:
Q  235 ttcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggaca 290  Q
    |||||||||||| || ||||||||||| ||||||||||||||||||||||||||||    
T  926815 ttcagtgtaattataagtgtcggtgtcggacgcgacacgtgtccgacaccgggaca 926760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 14134723 - 14134818
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||||||||||||||||| ||| ||||||||||  || ||||||||||||| |||| ||||||  |||||  ||| ||||| |||| |||||||    
T  14134723 tcacataattcagtgtaattatatatgtcggtgtcaaacacgacacgtgtccgtcaccaggacacgcctaattcgaggagtgtccgtgtttcatag 14134818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 22652035 - 22652106
Alignment:
Q  251 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||||||| ||| ||||| |||||||||||||||||||  |||||| ||| ||||| ||||||||||||    
T  22652035 gtgtcggtgtcggacacgacatgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 22652106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 299
Target Start/End: Complemental strand, 33405418 - 33405347
Alignment:
Q  228 cacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatc 299  Q
    ||||||||| ||||||||| |||||||||||||| ||| |||||| |||| |||||| |||||| |||||||    
T  33405418 cacataatttagtgtaattatatgtgtcggtgtcggacacgacacatgtctgacacctggacacggctaatc 33405347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 229 - 322
Target Start/End: Complemental strand, 24413592 - 24413499
Alignment:
Q  229 acataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||||||| |||||| || ||||| ||||| ||| |||  ||||||| ||| ||||||||  |||||| ||||||||| ||||||||||||    
T  24413592 acataattcagggtaattataagtgtcagtgtcggacacgatgcgtgtccaacagcgggacacgtctaatccgagaagtgtccgtgcttcatag 24413499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 324
Target Start/End: Original strand, 40332215 - 40332312
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    ||||||||||||||||||||  | ||||||||||  ||| |||||||||||| |||||||||| |  |||||| ||| ||||| |||| |||| ||||    
T  40332215 tcacataattcagtgtaattacaagtgtcggtgtgggacacgacacgtgtcccacaccgggacgcgcctaatccgaggagtgtccgtgtttcacaggt 40332312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 251 - 322
Target Start/End: Complemental strand, 15816129 - 15816058
Alignment:
Q  251 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||| |||||| ||| |||||||  ||||||||||||||||  |||||| ||||||||| ||||||||||||    
T  15816129 gtgttggtgtcggacacgacacgaatccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 15816058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 273 - 324
Target Start/End: Original strand, 27213595 - 27213646
Alignment:
Q  273 gtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    ||||| ||||||||||||| ||||||| ||||||||| ||||||||||||||    
T  27213595 gtgtcggacaccgggacacggctaatccgagaagtgtccgtgcttcataggt 27213646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 29447503 - 29447574
Alignment:
Q  251 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||||||| ||| ||||| ||||||||||||||||||   |||||| ||| ||||| ||||||||||||    
T  29447503 gtgtcggtgtcagacacgacatgtgtccgacaccgggacaggtctaatcggaggagtgtccgtgcttcatag 29447574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 36450789 - 36450694
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||| ||||||||||||||  | |||| |||||| ||| |||| ||||||||||||| ||||||  |||||| ||| |||||  |||||||||||    
T  36450789 tcacagaattcagtgtaattacaagtgtaggtgtcggacacgacgcgtgtccgacaccaggacacgcctaatccgaggagtgtctgtgcttcatag 36450694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 314
Target Start/End: Complemental strand, 126369 - 126295
Alignment:
Q  240 tgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtg 314  Q
    ||||||| |||||||| ||||| ||| |||||||||||| | |||||||||| ||||||| ||| ||||| ||||    
T  126369 tgtaattatatgtgtcagtgtcggacacgacacgtgtccaataccgggacacggctaatccgaggagtgtccgtg 126295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 227 - 324
Target Start/End: Original strand, 18407743 - 18407840
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    ||||||||||||||||||||  | |||||| || | ||| |||||| ||||||||||  ||||||  |||||  ||| ||||| ||||||||||||||    
T  18407743 tcacataattcagtgtaattacaagtgtcgctgccggacacgacacatgtccgacactaggacacgcctaattggaggagtgtccgtgcttcataggt 18407840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 227 - 316
Target Start/End: Original strand, 38079023 - 38079112
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgct 316  Q
    |||||| ||||||||||||| |||| |||| |||| ||| |||| | |||||||||||||| |||   |||||||| |||||| ||||||    
T  38079023 tcacatgattcagtgtaattatatgcgtcgatgtcggacacgacgcatgtccgacaccgggccacgtataatctgaaaagtgtccgtgct 38079112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 291
Target Start/End: Original strand, 31557020 - 31557084
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacac 291  Q
    ||||||||||||||||||||  | || |||||||| ||| |||||| ||||||||||| ||||||    
T  31557020 tcacataattcagtgtaattacaagtttcggtgtcagacacgacacatgtccgacaccaggacac 31557084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 324
Target Start/End: Complemental strand, 949278 - 949203
Alignment:
Q  249 atgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    ||||||||||| | ||  |||||| | |||||||||| |||||  |||||||||| | ||||||||||||||||||    
T  949278 atgtgtcggtgccggatacgacacatatccgacaccgagacactcctaatctgaggaatgttcgtgcttcataggt 949203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 3951571 - 3951476
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||| ||| ||||||| || |||||||||||||| ||| ||||||||||| ||||| || ||||  ||||||  || ||| | ||||||||||||    
T  3951571 tcacaaaatgcagtgtacttatatgtgtcggtgtcagacacgacacgtgtctgacacgggaacacgcctaatccaaggagtttccgtgcttcatag 3951476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 199
Target Start/End: Complemental strand, 4298996 - 4298965
Alignment:
Q  168 acctatgaagcacggatatggacacggacacg 199  Q
    ||||||||||||||||||||||||||||||||    
T  4298996 acctatgaagcacggatatggacacggacacg 4298965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 261
Target Start/End: Complemental strand, 4786373 - 4786339
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtc 261  Q
    |||||||||||||||||||| ||||||||||||||    
T  4786373 tcacataattcagtgtaattatatgtgtcggtgtc 4786339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 309
Target Start/End: Original strand, 8293849 - 8293931
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgt 309  Q
    |||| ||||||||||||||| ||||||||||||||  ||  ||||| | || |||||| ||||||| |||||| ||| |||||    
T  8293849 tcacgtaattcagtgtaattatatgtgtcggtgtcaaacatgacacatatctgacacctggacacacctaatccgaggagtgt 8293931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 323
Target Start/End: Original strand, 8343381 - 8343447
Alignment:
Q  257 gtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatagg 323  Q
    ||||| ||| |||||||||||||||||||||||||  |||||| ||  |||||  ||||||||||||    
T  8343381 gtgtccgacacgacacgtgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcatagg 8343447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 261
Target Start/End: Original strand, 8847280 - 8847314
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtc 261  Q
    |||||||||||||||||||| ||||||||||||||    
T  8847280 tcacataattcagtgtaattatatgtgtcggtgtc 8847314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 261
Target Start/End: Complemental strand, 11927121 - 11927087
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtc 261  Q
    |||||||||||||||||||| ||||||||||||||    
T  11927121 tcacataattcagtgtaattatatgtgtcggtgtc 11927087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 279
Target Start/End: Original strand, 22596020 - 22596070
Alignment:
Q  229 acataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccg 279  Q
    ||||||||||||||||||  | |||| |||||| |||||||||||||||||    
T  22596020 acataattcagtgtaattacaagtgttggtgtcggacgcgacacgtgtccg 22596070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 261
Target Start/End: Complemental strand, 26902210 - 26902176
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtc 261  Q
    |||||||||||||||||||| ||||||||||||||    
T  26902210 tcacataattcagtgtaattatatgtgtcggtgtc 26902176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 37283845 - 37283755
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||||||||||||||||  |||||||||||||  ||| |||||||||||    ||||||||||  |||||| ||| ||||  ||||||||||||    
T  37283845 tcacataattcagtgtaat--tatgtgtcggtgtgggacacgacacgtgtc---taccgggacacgtctaatccgaggagtgcccgtgcttcatag 37283755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 321
Target Start/End: Complemental strand, 43737846 - 43737752
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcata 321  Q
    ||||| ||| |||||||||| |||||||||||||| ||| ||||| ||||| ||||| |||| ||  || |||  || ||||| |||||||||||    
T  43737846 tcacaaaatacagtgtaattatatgtgtcggtgtcggacacgacaggtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcata 43737752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 9414910 - 9414857
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccga 280  Q
    ||||||||||||||| |||| || |||| |||||| ||| ||||||||||||||    
T  9414910 tcacataattcagtgcaattataagtgttggtgtcagacacgacacgtgtccga 9414857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 322
Target Start/End: Original strand, 40064032 - 40064081
Alignment:
Q  273 gtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||||||||||||||||| |||||| ||| ||||| |||||| |||||    
T  40064032 gtgtccgacaccgggacacatctaatccgaggagtgtccgtgctacatag 40064081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 291
Target Start/End: Original strand, 20873093 - 20873157
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacac 291  Q
    |||||||||| |||||||||  | ||||||||||| ||| ||| |||||||||| |||| |||||    
T  20873093 tcacataatttagtgtaattacaagtgtcggtgtcggacacgatacgtgtccgataccgagacac 20873157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 268 - 324
Target Start/End: Complemental strand, 22197725 - 22197669
Alignment:
Q  268 gacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    |||||||||||||||||||  |||  |||||||||| ||||| ||||||| ||||||    
T  22197725 gacacgtgtccgacaccggatcacgcctaatctgaggagtgtccgtgctttataggt 22197669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 241653 - 241724
Alignment:
Q  251 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||| |||||| ||| |||||||||||||||||||||||||  |||||| ||||||||| ||||||||||||    
T  241653 gtgttggtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 241724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 236964 - 236912
Alignment:
Q  272 cgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    |||||| |||||||||||||| |||||||||| |||||  |||||||||||||    
T  236964 cgtgtctgacaccgggacacacctaatctgaggagtgtctgtgcttcataggt 236912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 238 - 322
Target Start/End: Original strand, 8833 - 8917
Alignment:
Q  238 agtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||||||  | ||||||||||| ||| ||||||||||||||||||| |||||  |||||||||| ||| | ||||||||||||    
T  8833 agtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggagtctccgtgcttcatag 8917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 251 - 324
Target Start/End: Original strand, 71784 - 71857
Alignment:
Q  251 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 324  Q
    ||||||||||| ||| | |||||||||||||||||||||||  |||||| ||| |||||  |||||||||||||    
T  71784 gtgtcggtgtcggacacaacacgtgtccgacaccgggacacgactaatccgaggagtgtcggtgcttcataggt 71857  T

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Target: scaffold0361 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 171 - 322
Target Start/End: Original strand, 14498 - 14646
Alignment:
Q  171 tatgaagcacggatatggacac-ggacacgccgagaccgctaaaaatttgnnnnnnntcacataattcagtgtaattctatgtgtcggtgtctgacgcga 269  Q
    ||||||||||||||| |||||| ||||||||||| ||  |||| ||||||       ||||||||||||||||||||  | |||   ||||| ||| |||    
T  14498 tatgaagcacggatacggacaccggacacgccgacacaactaataatttgaaaaaa-tcacataattcagtgtaattacaagtg---gtgtcggacacga 14593  T
Q  270 cacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    |||||||||||||||| |||||  ||||||  || ||||| ||||||||||||    
T  14594 cacgtgtccgacaccgagacacgcctaatcgaaggagtgtacgtgcttcatag 14646  T

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Target: scaffold0793 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 4918 - 4821
Alignment:
Q  227 tcacataattcagtgtaattctatgtgtcggtgtctg--acgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||||||||||||||||  | |||| |||||||   || |||||| |||||||||| |||||||  |||||| ||| ||||| ||||||||||||    
T  4918 tcacataattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 4821  T

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Target: scaffold0083 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 45563 - 45502
Alignment:
Q  229 acataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggaca 290  Q
    ||||||||||||||||||  | ||||||||||| ||| ||||||||||| ||||||| ||||    
T  45563 acataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtctgacaccgcgaca 45502  T

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Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 92775 - 92824
Alignment:
Q  170 ctatgaagcacggatatggacacggacacgccgagaccgctaaaaatttg 219  Q
    |||||||||||||||| |||||| |||||||||| |||||||| ||||||    
T  92775 ctatgaagcacggatacggacactgacacgccgacaccgctaataatttg 92824  T

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Target: scaffold0123 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 322
Target Start/End: Complemental strand, 44525 - 44454
Alignment:
Q  251 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||||||  ||| | ||||||||||||||| ||||||  | |||||||||||||||  |||||||||||    
T  44525 gtgtcggtgttggacacaacacgtgtccgacactgggacatggttaatctgagaagtgtctgtgcttcatag 44454  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 322
Target Start/End: Complemental strand, 135313 - 135263
Alignment:
Q  272 cgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 322  Q
    ||||||||||||| ||||||  ||||||||||  |||||||||||||||||    
T  135313 cgtgtccgacaccaggacacgcctaatctgaggcgtgttcgtgcttcatag 135263  T

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Target: scaffold0022 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 284
Target Start/End: Original strand, 90871 - 90924
Alignment:
Q  231 ataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacacc 284  Q
    |||||||||||||||| ||| ||||| |||| ||| | ||||||||||||||||    
T  90871 ataattcagtgtaattatatatgtcgatgtcagacacaacacgtgtccgacacc 90924  T

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Target: scaffold0136 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 170 - 198
Target Start/End: Complemental strand, 3969 - 3941
Alignment:
Q  170 ctatgaagcacggatatggacacggacac 198  Q
    |||||||||||||||||||||||||||||    
T  3969 ctatgaagcacggatatggacacggacac 3941  T

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Target: scaffold0044 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 53239 - 53279
Alignment:
Q  251 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacac 291  Q
    ||||||||||| |||  ||||||||||||||||||||||||    
T  53239 gtgtcggtgtcggacatgacacgtgtccgacaccgggacac 53279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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