View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0033_high_15 (Length: 252)

Name: NF0033_high_15
Description: NF0033
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0033_high_15
NF0033_high_15
[»] chr4 (54 HSPs)
chr4 (1-240)||(22234679-22234929)
chr4 (139-243)||(35161053-35161157)
chr4 (141-240)||(23292926-23293025)
chr4 (141-242)||(8423658-8423759)
chr4 (141-240)||(35157925-35158024)
chr4 (141-240)||(12895214-12895313)
chr4 (141-240)||(34306744-34306843)
chr4 (172-240)||(49431046-49431114)
chr4 (141-240)||(2361915-2362014)
chr4 (141-240)||(36509032-36509131)
chr4 (141-240)||(40179576-40179675)
chr4 (134-240)||(28964181-28964287)
chr4 (139-196)||(19482743-19482800)
chr4 (172-240)||(29205464-29205532)
chr4 (184-240)||(54580006-54580062)
chr4 (159-242)||(9996858-9996941)
chr4 (145-240)||(12797282-12797377)
chr4 (141-240)||(715545-715646)
chr4 (141-240)||(752871-752972)
chr4 (142-206)||(3947702-3947766)
chr4 (141-242)||(24343525-24343632)
chr4 (137-212)||(30982803-30982878)
chr4 (141-242)||(36635342-36635449)
chr4 (146-192)||(3712458-3712504)
chr4 (180-242)||(8402721-8402783)
chr4 (141-242)||(16886627-16886726)
chr4 (139-212)||(53381528-53381602)
chr4 (143-240)||(4157169-4157266)
chr4 (139-240)||(16073414-16073515)
chr4 (143-196)||(19312410-19312463)
chr4 (138-211)||(24613627-24613700)
chr4 (202-242)||(5775359-5775399)
chr4 (142-206)||(14465006-14465070)
chr4 (206-242)||(40613468-40613504)
chr4 (191-242)||(10499260-10499311)
chr4 (139-190)||(18513173-18513224)
chr4 (141-196)||(29205532-29205587)
chr4 (141-188)||(37203324-37203371)
chr4 (141-240)||(42640549-42640643)
chr4 (178-240)||(4157456-4157518)
chr4 (139-212)||(10133756-10133830)
chr4 (139-189)||(11596295-11596345)
chr4 (204-242)||(16189727-16189765)
chr4 (178-240)||(21945523-21945585)
chr4 (202-243)||(13134467-13134508)
chr4 (143-196)||(28000672-28000725)
chr4 (141-242)||(30103297-30103397)
chr4 (202-242)||(18576038-18576078)
chr4 (210-242)||(22440609-22440641)
chr4 (202-242)||(30982879-30982919)
chr4 (160-240)||(38846971-38847051)
chr4 (140-184)||(40784029-40784073)
chr4 (202-242)||(44132645-44132685)
chr4 (202-242)||(46160914-46160954)
[»] chr6 (54 HSPs)
chr6 (141-242)||(7377997-7378098)
chr6 (141-240)||(28152118-28152217)
chr6 (141-240)||(34595154-34595253)
chr6 (137-240)||(28715315-28715418)
chr6 (172-243)||(9658896-9658967)
chr6 (177-242)||(7265569-7265634)
chr6 (144-242)||(9025448-9025535)
chr6 (144-240)||(32978842-32978938)
chr6 (139-240)||(8776906-8777012)
chr6 (158-240)||(12627534-12627616)
chr6 (142-240)||(17841530-17841628)
chr6 (178-240)||(33001266-33001328)
chr6 (139-212)||(10339052-10339125)
chr6 (141-242)||(13360313-13360413)
chr6 (137-241)||(7740660-7740764)
chr6 (140-240)||(16833328-16833428)
chr6 (139-242)||(17327588-17327696)
chr6 (141-240)||(7977770-7977869)
chr6 (191-242)||(19040370-19040421)
chr6 (141-240)||(24645501-24645600)
chr6 (142-197)||(31959213-31959268)
chr6 (138-236)||(4877967-4878064)
chr6 (202-240)||(7027262-7027300)
chr6 (144-243)||(8389411-8389514)
chr6 (185-242)||(31579211-31579266)
chr6 (141-243)||(32511606-32511708)
chr6 (139-212)||(8365446-8365519)
chr6 (139-212)||(10294166-10294239)
chr6 (202-242)||(9617452-9617492)
chr6 (202-242)||(9629401-9629441)
chr6 (139-242)||(12236676-12236780)
chr6 (202-242)||(26562707-26562747)
chr6 (140-239)||(6898220-6898319)
chr6 (203-242)||(7086813-7086852)
chr6 (141-238)||(9027200-9027286)
chr6 (141-212)||(9107299-9107370)
chr6 (207-242)||(11591876-11591911)
chr6 (139-242)||(13364643-13364746)
chr6 (141-212)||(16766756-16766827)
chr6 (178-240)||(29020932-29020994)
chr6 (186-243)||(30851619-30851674)
chr6 (172-242)||(7996353-7996419)
chr6 (172-242)||(8022382-8022448)
chr6 (143-211)||(5000557-5000625)
chr6 (202-242)||(5732511-5732551)
chr6 (202-242)||(9195755-9195795)
chr6 (198-242)||(13851754-13851798)
chr6 (202-242)||(16488591-16488631)
chr6 (202-242)||(18367854-18367894)
chr6 (202-242)||(19044482-19044522)
chr6 (202-242)||(21924936-21924976)
chr6 (206-242)||(30866149-30866185)
chr6 (202-242)||(34073348-34073388)
chr6 (141-189)||(34894968-34895016)
[»] chr3 (54 HSPs)
chr3 (138-240)||(40993272-40993374)
chr3 (141-240)||(18426969-18427068)
chr3 (136-240)||(55401095-55401199)
chr3 (141-242)||(35222956-35223057)
chr3 (142-242)||(8789489-8789591)
chr3 (141-240)||(20503485-20503584)
chr3 (141-242)||(11251996-11252095)
chr3 (138-212)||(41961576-41961650)
chr3 (145-242)||(25093520-25093617)
chr3 (172-240)||(10954972-10955040)
chr3 (143-238)||(25775531-25775624)
chr3 (141-240)||(27505266-27505370)
chr3 (171-242)||(45451571-45451642)
chr3 (181-242)||(2941576-2941637)
chr3 (141-242)||(13845465-13845566)
chr3 (139-212)||(14209172-14209245)
chr3 (141-213)||(25074841-25074914)
chr3 (139-192)||(40052380-40052433)
chr3 (139-196)||(49651714-49651771)
chr3 (172-236)||(3631708-3631772)
chr3 (142-206)||(14216957-14217021)
chr3 (142-206)||(14223086-14223150)
chr3 (143-240)||(28918021-28918120)
chr3 (143-240)||(29508464-29508567)
chr3 (202-240)||(7928470-7928508)
chr3 (141-195)||(17276792-17276846)
chr3 (143-212)||(4987222-4987291)
chr3 (140-240)||(7171521-7171621)
chr3 (141-237)||(23657762-23657858)
chr3 (185-236)||(3865698-3865749)
chr3 (141-212)||(25064966-25065037)
chr3 (141-243)||(4466540-4466642)
chr3 (141-195)||(8101892-8101946)
chr3 (141-191)||(11610578-11610628)
chr3 (141-195)||(34185052-34185106)
chr3 (202-240)||(38731238-38731276)
chr3 (185-242)||(6780403-6780460)
chr3 (202-243)||(7614416-7614457)
chr3 (205-242)||(10690266-10690303)
chr3 (139-196)||(52369851-52369908)
chr3 (202-242)||(8039836-8039876)
chr3 (202-242)||(8383275-8383315)
chr3 (141-241)||(8842348-8842448)
chr3 (141-181)||(8903514-8903554)
chr3 (205-241)||(11507479-11507515)
chr3 (202-242)||(13414487-13414527)
chr3 (202-242)||(14028025-14028065)
chr3 (172-212)||(14832158-14832198)
chr3 (146-206)||(16192667-16192727)
chr3 (202-242)||(20691337-20691377)
chr3 (143-242)||(24204983-24205082)
chr3 (172-240)||(24633372-24633440)
chr3 (142-186)||(25211604-25211648)
chr3 (202-242)||(49505155-49505195)
[»] chr1 (61 HSPs)
chr1 (143-241)||(29163323-29163421)
chr1 (139-240)||(5898204-5898305)
chr1 (140-240)||(1815277-1815377)
chr1 (139-240)||(51410045-51410146)
chr1 (138-242)||(2896058-2896162)
chr1 (142-238)||(12918967-12919063)
chr1 (140-240)||(37598852-37598951)
chr1 (155-242)||(40181889-40181976)
chr1 (142-240)||(40258874-40258972)
chr1 (141-240)||(18190048-18190147)
chr1 (141-240)||(18337349-18337448)
chr1 (141-240)||(22515827-22515926)
chr1 (143-240)||(1486646-1486748)
chr1 (139-240)||(9828064-9828176)
chr1 (180-242)||(36878479-36878541)
chr1 (143-240)||(42359391-42359488)
chr1 (143-198)||(17778615-17778670)
chr1 (141-240)||(38078601-38078700)
chr1 (141-240)||(46348323-46348422)
chr1 (139-212)||(40917808-40917881)
chr1 (141-240)||(52903269-52903365)
chr1 (140-196)||(6427539-6427595)
chr1 (142-242)||(10233271-10233374)
chr1 (140-242)||(20157283-20157391)
chr1 (202-242)||(30749858-30749898)
chr1 (202-242)||(30771309-30771349)
chr1 (141-213)||(32461393-32461465)
chr1 (202-242)||(34371731-34371771)
chr1 (202-242)||(44482248-44482288)
chr1 (203-242)||(1864882-1864921)
chr1 (190-241)||(17705576-17705626)
chr1 (141-208)||(18556385-18556452)
chr1 (146-192)||(1209821-1209867)
chr1 (140-242)||(7918153-7918252)
chr1 (138-242)||(9690210-9690313)
chr1 (172-242)||(43492465-43492535)
chr1 (154-243)||(2784573-2784662)
chr1 (203-240)||(13997903-13997940)
chr1 (142-242)||(10577676-10577776)
chr1 (202-242)||(23636050-23636090)
chr1 (202-242)||(25361904-25361944)
chr1 (202-242)||(39953147-39953187)
chr1 (141-240)||(5944303-5944413)
chr1 (141-242)||(19562556-19562662)
chr1 (140-191)||(46940747-46940798)
chr1 (141-212)||(47989556-47989627)
chr1 (141-243)||(19637785-19637887)
chr1 (146-192)||(23219608-23219654)
chr1 (146-240)||(26830608-26830701)
chr1 (141-242)||(34712323-34712424)
chr1 (202-239)||(13436479-13436516)
chr1 (193-242)||(14332634-14332683)
chr1 (209-242)||(25098563-25098596)
chr1 (202-242)||(6427368-6427408)
chr1 (202-242)||(9709838-9709878)
chr1 (210-242)||(12443469-12443501)
chr1 (210-242)||(19324580-19324612)
chr1 (141-240)||(22794018-22794117)
chr1 (202-242)||(25272500-25272540)
chr1 (140-212)||(31694638-31694710)
chr1 (202-242)||(38503338-38503378)
[»] chr7 (44 HSPs)
chr7 (141-243)||(598225-598327)
chr7 (142-242)||(32287404-32287504)
chr7 (141-242)||(21880170-21880271)
chr7 (140-240)||(15680829-15680929)
chr7 (140-242)||(1401043-1401143)
chr7 (135-242)||(5835265-5835372)
chr7 (139-240)||(5409769-5409875)
chr7 (142-242)||(20549809-20549909)
chr7 (191-242)||(9482952-9483003)
chr7 (141-240)||(21864828-21864927)
chr7 (164-243)||(27093376-27093455)
chr7 (164-243)||(27184846-27184925)
chr7 (142-212)||(32308179-32308249)
chr7 (141-242)||(18212973-18213074)
chr7 (141-240)||(32093954-32094059)
chr7 (139-236)||(33994236-33994333)
chr7 (142-242)||(22484043-22484143)
chr7 (202-242)||(22602711-22602751)
chr7 (141-242)||(7133212-7133319)
chr7 (141-212)||(24339701-24339772)
chr7 (141-240)||(42720830-42720929)
chr7 (139-240)||(9778520-9778626)
chr7 (172-242)||(39138462-39138532)
chr7 (202-239)||(640134-640171)
chr7 (146-243)||(27732189-27732281)
chr7 (141-206)||(43027404-43027469)
chr7 (164-243)||(12278852-12278931)
chr7 (198-242)||(24146834-24146878)
chr7 (203-242)||(17851449-17851488)
chr7 (141-195)||(17852065-17852119)
chr7 (208-242)||(22868060-22868094)
chr7 (203-240)||(15902842-15902879)
chr7 (201-242)||(19206068-19206109)
chr7 (143-212)||(26033392-26033461)
chr7 (183-240)||(26733324-26733381)
chr7 (202-242)||(3721111-3721151)
chr7 (202-242)||(5548694-5548734)
chr7 (202-242)||(7328692-7328732)
chr7 (172-240)||(8234166-8234234)
chr7 (202-242)||(16341514-16341554)
chr7 (202-242)||(17307911-17307951)
chr7 (202-242)||(19992019-19992059)
chr7 (203-243)||(23849460-23849500)
chr7 (141-229)||(24105709-24105797)
[»] chr5 (41 HSPs)
chr5 (139-240)||(43564901-43565002)
chr5 (143-240)||(21190998-21191095)
chr5 (141-240)||(21576685-21576784)
chr5 (143-242)||(30502330-30502429)
chr5 (143-242)||(30542673-30542772)
chr5 (140-242)||(14873535-14873642)
chr5 (141-240)||(42893380-42893479)
chr5 (174-242)||(18421814-18421882)
chr5 (154-242)||(26312787-26312875)
chr5 (139-242)||(28588612-28588715)
chr5 (145-238)||(30098982-30099075)
chr5 (140-242)||(27932253-27932355)
chr5 (141-242)||(21194063-21194164)
chr5 (173-242)||(23012380-23012449)
chr5 (205-242)||(39758290-39758327)
chr5 (202-242)||(3966521-3966561)
chr5 (202-242)||(6471890-6471930)
chr5 (172-212)||(21542089-21542129)
chr5 (202-242)||(41091258-41091298)
chr5 (186-242)||(42029770-42029826)
chr5 (141-212)||(7677764-7677835)
chr5 (139-242)||(32630673-32630776)
chr5 (141-212)||(32766872-32766943)
chr5 (144-215)||(39268541-39268612)
chr5 (141-212)||(39698600-39698671)
chr5 (162-242)||(24272994-24273071)
chr5 (162-242)||(24389143-24389220)
chr5 (139-189)||(38464311-38464361)
chr5 (191-240)||(15884008-15884057)
chr5 (141-242)||(17123066-17123166)
chr5 (202-243)||(17925173-17925214)
chr5 (141-206)||(30098391-30098456)
chr5 (201-242)||(32426869-32426910)
chr5 (202-242)||(6401516-6401556)
chr5 (143-242)||(7997108-7997207)
chr5 (202-242)||(16203796-16203836)
chr5 (141-189)||(19820328-19820376)
chr5 (172-212)||(21522809-21522849)
chr5 (172-212)||(21533375-21533415)
chr5 (202-242)||(21814279-21814319)
chr5 (202-242)||(36838561-36838601)
[»] scaffold0652 (1 HSPs)
scaffold0652 (142-240)||(403-501)
[»] chr2 (42 HSPs)
chr2 (143-240)||(2438661-2438758)
chr2 (141-240)||(18840953-18841052)
chr2 (142-237)||(28596492-28596587)
chr2 (141-240)||(30404790-30404889)
chr2 (140-240)||(15972893-15972993)
chr2 (172-239)||(5367213-5367280)
chr2 (141-240)||(37558997-37559096)
chr2 (180-242)||(20242706-20242768)
chr2 (141-240)||(38117099-38117198)
chr2 (140-234)||(34993921-34994015)
chr2 (172-242)||(37411215-37411285)
chr2 (141-242)||(24009314-24009414)
chr2 (139-212)||(37419802-37419875)
chr2 (172-240)||(5040754-5040822)
chr2 (164-240)||(31808097-31808173)
chr2 (141-212)||(35056927-35056998)
chr2 (141-211)||(26769571-26769641)
chr2 (150-236)||(29176442-29176528)
chr2 (201-242)||(18889591-18889632)
chr2 (141-194)||(42511322-42511375)
chr2 (141-213)||(21782744-21782816)
chr2 (202-242)||(34784983-34785023)
chr2 (202-242)||(38355888-38355928)
chr2 (172-239)||(41843462-41843534)
chr2 (202-242)||(44860338-44860378)
chr2 (203-242)||(39279693-39279732)
chr2 (142-212)||(5891715-5891785)
chr2 (141-207)||(11223793-11223858)
chr2 (146-240)||(12224243-12224337)
chr2 (141-195)||(19980740-19980794)
chr2 (204-242)||(23718044-23718082)
chr2 (204-242)||(24105716-24105754)
chr2 (202-240)||(34691806-34691844)
chr2 (202-240)||(34714218-34714256)
chr2 (209-242)||(21616780-21616813)
chr2 (141-190)||(24975255-24975304)
chr2 (140-240)||(28677929-28678034)
chr2 (202-242)||(18276539-18276579)
chr2 (202-242)||(20922929-20922969)
chr2 (207-239)||(28524447-28524479)
chr2 (202-242)||(35056886-35056926)
chr2 (139-230)||(37497150-37497242)
[»] chr8 (45 HSPs)
chr8 (143-242)||(3025569-3025668)
chr8 (172-242)||(20679366-20679436)
chr8 (173-242)||(926760-926829)
chr8 (141-242)||(14134717-14134818)
chr8 (139-212)||(29510231-29510304)
chr8 (139-242)||(40332209-40332312)
chr8 (145-243)||(31580071-31580169)
chr8 (164-242)||(33405347-33405425)
chr8 (147-243)||(38079016-38079112)
chr8 (141-212)||(22652035-22652106)
chr8 (141-240)||(36450694-36450793)
chr8 (202-243)||(4786339-4786380)
chr8 (139-212)||(5813640-5813713)
chr8 (139-240)||(18407739-18407840)
chr8 (141-234)||(24413499-24413592)
chr8 (202-242)||(26902176-26902216)
chr8 (172-240)||(31557016-31557084)
chr8 (141-242)||(37283755-37283851)
chr8 (141-240)||(3951476-3951575)
chr8 (202-245)||(8847271-8847314)
chr8 (141-212)||(15816058-15816129)
chr8 (139-190)||(27213595-27213646)
chr8 (141-212)||(29447503-29447574)
chr8 (142-241)||(43737752-43737851)
chr8 (149-223)||(126295-126369)
chr8 (202-240)||(11927087-11927125)
chr8 (203-243)||(11803276-11803316)
chr8 (202-242)||(13844597-13844637)
chr8 (172-240)||(20873089-20873157)
chr8 (184-240)||(22596014-22596070)
chr8 (202-242)||(34897103-34897143)
chr8 (139-214)||(949203-949278)
chr8 (154-237)||(8293848-8293931)
chr8 (183-238)||(9414857-9414912)
chr8 (203-242)||(18964195-18964234)
chr8 (140-206)||(8343381-8343447)
chr8 (202-240)||(11944685-11944723)
chr8 (204-242)||(31236580-31236618)
chr8 (140-240)||(4298829-4298925)
chr8 (202-239)||(28384995-28385032)
chr8 (202-243)||(33382020-33382061)
chr8 (141-190)||(40064032-40064081)
chr8 (202-242)||(12606830-12606870)
chr8 (139-195)||(22197669-22197725)
chr8 (206-242)||(27213565-27213601)
[»] scaffold0050 (1 HSPs)
scaffold0050 (144-240)||(70298-70394)
[»] scaffold0053 (1 HSPs)
scaffold0053 (141-240)||(8818-8917)
[»] scaffold0003 (2 HSPs)
scaffold0003 (141-212)||(241653-241724)
scaffold0003 (139-191)||(236912-236964)
[»] scaffold0793 (1 HSPs)
scaffold0793 (141-240)||(4821-4922)
[»] scaffold0361 (1 HSPs)
scaffold0361 (141-240)||(14550-14646)
[»] scaffold0019 (1 HSPs)
scaffold0019 (139-212)||(71784-71857)
[»] scaffold0022 (1 HSPs)
scaffold0022 (179-242)||(90861-90924)
[»] scaffold0020 (1 HSPs)
scaffold0020 (141-242)||(135263-135353)
[»] scaffold0123 (2 HSPs)
scaffold0123 (205-242)||(44529-44566)
scaffold0123 (141-212)||(44454-44525)
[»] scaffold0083 (1 HSPs)
scaffold0083 (173-234)||(45502-45563)
[»] scaffold0036 (1 HSPs)
scaffold0036 (202-242)||(9748-9788)
[»] scaffold0279 (1 HSPs)
scaffold0279 (185-243)||(17787-17845)
[»] scaffold0171 (1 HSPs)
scaffold0171 (202-240)||(23440-23478)
[»] scaffold0044 (2 HSPs)
scaffold0044 (204-242)||(53198-53236)
scaffold0044 (172-212)||(53239-53279)
[»] scaffold0623 (1 HSPs)
scaffold0623 (202-242)||(5997-6037)
[»] scaffold0236 (1 HSPs)
scaffold0236 (202-242)||(25769-25809)
[»] scaffold0110 (1 HSPs)
scaffold0110 (203-243)||(28867-28907)


Alignment Details
Target: chr4 (Bit Score: 201; Significance: 1e-110; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 22234679 - 22234929
Alignment:
Q  1 caatttgcttctttttctccttttaagcaattggagataccaaactatgatcttcagcctcagatcttttgcagggttgtcaatgtccaactacttgtaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22234679 caatttgcttctttttctccttttaagcaattggagataccaaactatgatcttcagcctcagatcttttgcagggttgtcaatgtccaactacttgtaa 22234778  T
Q  101 gtactcaattatactctttgaattaactattagtgtttacctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||    
T  22234779 gtactcaattatactctttgaattaactattagtgtttacctatgaagcacgaacacttctcggattagctgtgtcctggtgtcggacacgtgtcgtgtc 22234878  T
Q  201 a-----------gacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |           |||||||||||||||||||||||||||||||||||||||    
T  22234879 agacaccgacacgacaccgacacatagaattacactgaattatgtgatttt 22234929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 139 - 243
Target Start/End: Complemental strand, 35161157 - 35161053
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatt 238  Q
    |||||||||||||| |||||| || |||||| ||||| |||||||||||||||||||| ||| ||| | || || || ||||||||||||||||||||||    
T  35161157 acctatgaagcacggacacttttcggattaggtgtgttccggtgtcggacacgtgtcgtgtccgactctgatacttataattacactgaattatgtgatt 35161058  T
Q  239 ttctt 243  Q
    |||||    
T  35161057 ttctt 35161053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 23292926 - 23293025
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||| ||||| ||| ||||||  ||||||||||||||||||||||||| ||| ||||||||||| |  ||||| ||||||||||||||||||    
T  23292926 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattatactgaattatgtgatttt 23293025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 242
Target Start/End: Original strand, 8423658 - 8423759
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||| ||||| ||||||||| ||||||  ||||||||||||||||||  ||||| ||| ||||||||||  || ||||||||||||||||||||||||    
T  8423658 ctatgacgcacggacacttctccgattaggcgtgtcccggtgtcggacagctgtcgtgtccgacaccgacatttataattacactgaattatgtgatttt 8423757  T
Q  241 ct 242  Q
    ||    
T  8423758 ct 8423759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 35157925 - 35158024
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||| ||||||||| |||||   |||| ||||||| ||||| |||||| ||||||||||||||| || ||||||||| ||||||||||||||    
T  35157925 ctatgaagcacggacacttctcggattaagcgtgttccggtgttggacatgtgtcgtgtcagacaccgacacttataattacactaaattatgtgatttt 35158024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 12895214 - 12895313
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||||||||| ||| ||||||  |||||||| ||||||| || ||||| ||| ||||||||||| || ||||||||  ||||||||||||||    
T  12895214 ctatgaagcacgaacactcctcggattaggcgtgtcccgatgtcggatacatgtcgtgtccgacaccgacacttataattacacaaaattatgtgatttt 12895313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 34306744 - 34306843
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||||||| | ||||||||||  ||||| ||||||||||||||||||| ||| ||||||||||| |  |||||||||  ||||| |||||||    
T  34306744 ctatgaagcacgaacattcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactacattatctgatttt 34306843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 240
Target Start/End: Complemental strand, 49431114 - 49431046
Alignment:
Q  172 gtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||| |||||||||||| ||| ||||||||||| |  ||||||||||||||||||||||||    
T  49431114 gtgtcccggtgttggacacgtgtcgtgtccgacaccgacacttttaattacactgaattatgtgatttt 49431046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 2361915 - 2362014
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||| |||||  ||||||||| |||||| ||||||| |||||| |||| ||| ||||||||||| |  ||||||||| |||||||| |||||    
T  2361915 ctatgaagcacggacactcgtcagattaggtgtgtctcggtgtcagacacgagtcgtgtccgacaccgacacttttaattacactaaattatgtaatttt 2362014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 36509032 - 36509131
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||| ||| ||||||| |||||   |||||| ||| || ||||||||||||||| ||| |||||||||| |||||||||  |||||||||||||    
T  36509032 ctatgaagcatgaatacttctcggattaaacgtgtcctggtatcagacacgtgtcgcgtccgacgccgacacatataattacacttgattatgtgatttt 36509131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 40179576 - 40179675
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||| ||||||||| | ||||| ||||||  |||||  ||||||| ||| |||||| ||| ||||||||| |||| ||||||||||||||||||||||||    
T  40179576 ctatcaagcacgaataattctcggattaggcgtgtcatggtgtcgaacatgtgtcgtgtccgacaccgacgcatataattacactgaattatgtgatttt 40179675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 134 - 240
Target Start/End: Original strand, 28964181 - 28964287
Alignment:
Q  134 tgtttacctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatg 233  Q
    |||||| |||||||||| | ||||| ||| ||||||  ||||||| |||||||| | |||||| ||| ||||| ||||| |  |||||||||||||||||    
T  28964181 tgtttaactatgaagcatggacactcctcggattaggcgtgtcccagtgtcggatatgtgtcgtgtccgacacagacacttgtaattacactgaattatg 28964280  T
Q  234 tgatttt 240  Q
    |||||||    
T  28964281 tgatttt 28964287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 19482800 - 19482743
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcg 196  Q
    |||||||||||||||||||| ||| |||||| |||||||| |||||||||||||||||    
T  19482800 acctatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacgtgtcg 19482743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 240
Target Start/End: Complemental strand, 29205532 - 29205464
Alignment:
Q  172 gtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||||||||| |||||| |||  |||||||||| |  ||||||||||||||||||||||||    
T  29205532 gtgtcccggtgtcggacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtgatttt 29205464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 54580006 - 54580062
Alignment:
Q  184 cggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    ||||||||||||| ||| ||||||||||| || ||||||||||||||||||||||||    
T  54580006 cggacacgtgtcgtgtccgacaccgacacttataattacactgaattatgtgatttt 54580062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 242
Target Start/End: Complemental strand, 9996941 - 9996858
Alignment:
Q  159 tctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||| |||||| ||||| || |||||||||||||||   ||| |||||||| ||||| ||||| ||||||||||||||||||||    
T  9996941 tctccgattaggtgtgttccagtgtcggacacgtgttatgtctgacaccgagacatataattatactgaattatgtgattttct 9996858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 240
Target Start/End: Original strand, 12797282 - 12797377
Alignment:
Q  145 gaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||| | ||| ||||||   |||||||||||| |||| || ||| ||| ||||||||||| |  ||||||||||||||||||||||||    
T  12797282 gaagcacgaacattcctcggattagacttgtcccggtgtcagacatgtatcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 12797377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 715545 - 715646
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgt--cagacaccgacacatagaattacactgaattatgtgatt 238  Q
    |||||||||||| ||||| ||| ||||||  ||||||| |||||||||| |||||| ||   ||||||| |||| |  ||||||||||||||||||||||    
T  715545 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatgtgatt 715644  T
Q  239 tt 240  Q
    ||    
T  715645 tt 715646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 752871 - 752972
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgt--cagacaccgacacatagaattacactgaattatgtgatt 238  Q
    |||||||||||| ||||| ||| ||||||  ||||||| |||||||||| |||||| ||   ||||||| |||| |  ||||||||||||||||||||||    
T  752871 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatgtgatt 752970  T
Q  239 tt 240  Q
    ||    
T  752971 tt 752972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 206
Target Start/End: Original strand, 3947702 - 3947766
Alignment:
Q  142 tatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacac 206  Q
    ||||||||||| ||||| ||| |||||| ||||||| |||||||||||||||||| ||| |||||    
T  3947702 tatgaagcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgtccgacac 3947766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 242
Target Start/End: Complemental strand, 24343632 - 24343525
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtc-gcgtcagacac-----cgacacatagaattacactgaattatgt 234  Q
    |||||||||||| ||||| |||||| |||  |||||||||||||||||||| ||| | ||| |||||     |||||| || ||||||||||||||||||    
T  24343632 ctatgaagcacggacactcctcagaataggcgtgtcccggtgtcggacacgcgtcggtgtcggacaccgacacgacacctataattacactgaattatgt 24343533  T
Q  235 gattttct 242  Q
     |||||||    
T  24343532 aattttct 24343525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 30982803 - 30982878
Alignment:
Q  137 ttacctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacac 212  Q
    |||| ||||||||||| |||||  |  ||||||  ||||||||||||||||||||||||| ||| |||||||||||    
T  30982803 ttacatatgaagcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacac 30982878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 242
Target Start/End: Complemental strand, 36635449 - 36635342
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacac-----cga-cacatagaattacactgaattatgt 234  Q
    |||||||||||| |||||  || ||||||  ||||||||||||| ||| ||||||| ||| |||||     ||| |||||| ||||||||||||||||||    
T  36635449 ctatgaagcacggacactcttcggattaggcgtgtcccggtgtctgacgcgtgtcgtgtctgacactcacacgaacacatataattacactgaattatgt 36635350  T
Q  235 gattttct 242  Q
    ||||||||    
T  36635349 gattttct 36635342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 192
Target Start/End: Original strand, 3712458 - 3712504
Alignment:
Q  146 aagcacgaacacttctcagattagctgtgtcccggtgtcggacacgt 192  Q
    ||||||| ||||| ||||||||||| |||||||||||||||||||||    
T  3712458 aagcacggacactcctcagattagccgtgtcccggtgtcggacacgt 3712504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 8402721 - 8402783
Alignment:
Q  180 gtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||| |||||| ||| ||||| || ||||| |||||||||||||||| |||||||||    
T  8402721 gtgtcggacaagtgtcgtgtctgacactgagacatataattacactgaattatatgattttct 8402783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 242
Target Start/End: Complemental strand, 16886726 - 16886627
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||| ||||||| |||||||| |||||||| |||| |||||||||||||| ||| | ||| | |||| ||||||   ||| ||||||||||||||| |||    
T  16886726 ctatcaagcacggacacttctgagattagccgtgttccggtgtcggacacatgtagtgtctgtcaccaacacat--tatttcactgaattatgtgaattt 16886629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 53381528 - 53381602
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtc-gcgtcagacaccgacac 212  Q
    |||||||||||||| ||||| ||| |||||| ||||||||||||||||| ||| ||| | ||| |||||||||||    
T  53381528 acctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggatacgcgtcagtgtccgacaccgacac 53381602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 4157266 - 4157169
Alignment:
Q  143 atgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||  ||||| |||  ||||| ||| || |||||||||||| |||||| ||| ||||||||||| |  |||| |||| ||||||||||||||    
T  4157266 atgaagcacagacactcctcgaattaggtgtttctcggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtgatttt 4157169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 240
Target Start/End: Complemental strand, 16073515 - 16073414
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatt 238  Q
    |||||||||||| | ||||| ||| ||||||  |||||   |||||||||| || ||| ||| ||||||||||| |  ||||||||||||||||| ||||    
T  16073515 acctatgaagcatggacactcctcggattaggcgtgtcttagtgtcggacatgtatcgtgtccgacaccgacacttgtaattacactgaattatgcgatt 16073416  T
Q  239 tt 240  Q
    ||    
T  16073415 tt 16073414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 19312463 - 19312410
Alignment:
Q  143 atgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcg 196  Q
    ||||| |||| ||||||||||||||||  ||||| |||||||||||||||||||    
T  19312463 atgaaacacggacacttctcagattagacgtgtctcggtgtcggacacgtgtcg 19312410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 211
Target Start/End: Original strand, 24613627 - 24613700
Alignment:
Q  138 tacctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgaca 211  Q
    ||||||||||||||| ||||| ||  ||||||  |||||| |||||| ||||||||||| ||| ||||||||||    
T  24613627 tacctatgaagcacggacactcctaggattagacgtgtcctggtgtcagacacgtgtcgtgtctgacaccgaca 24613700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 5775359 - 5775399
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| ||||||||| ||||||||||||||||    
T  5775359 gacaccgacacatataattacacttaattatgtgattttct 5775399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 206
Target Start/End: Original strand, 14465006 - 14465070
Alignment:
Q  142 tatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacac 206  Q
    ||||||||||| ||||| ||||||||||  ||||||| |||||| |||||||||| ||| |||||    
T  14465006 tatgaagcacggacactcctcagattagacgtgtcccagtgtcgaacacgtgtcgtgtctgacac 14465070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 40613504 - 40613468
Alignment:
Q  206 ccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||| ||||||||||||||||||||||||||    
T  40613504 ccgacacatataattacactgaattatgtgattttct 40613468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 242
Target Start/End: Original strand, 10499260 - 10499311
Alignment:
Q  191 gtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||| ||| ||||| |||||||| ||||||||| ||||||||||||||||    
T  10499260 gtgtcgggtccgacactgacacatataattacactaaattatgtgattttct 10499311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 190
Target Start/End: Original strand, 18513173 - 18513224
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacac 190  Q
    |||||||||||||| ||||| ||||||||||  |||||| ||||||||||||    
T  18513173 acctatgaagcacggacactcctcagattaggcgtgtcctggtgtcggacac 18513224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 29205587 - 29205532
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcg 196  Q
    |||||||||||||||||| ||| ||||||  ||||||| |||||||||| ||||||    
T  29205587 ctatgaagcacgaacactcctcggattaggcgtgtcccagtgtcggacatgtgtcg 29205532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 188
Target Start/End: Complemental strand, 37203371 - 37203324
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggac 188  Q
    |||||||||||| ||||||||| ||||||  |||||||||||||||||    
T  37203371 ctatgaagcacggacacttctcggattagacgtgtcccggtgtcggac 37203324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 42640643 - 42640549
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||| | ||| ||| ||||||  |||||| |||| ||||||||||||      ||||||||||| |  ||||||||||||||||||||||||    
T  42640643 ctatgaagcacggaaactcctcggattaggcgtgtcctggtgccggacacgtgtcc-----gacaccgacacttgtaattacactgaattatgtgatttt 42640549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 4157518 - 4157456
Alignment:
Q  178 cggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||| |||||| ||| ||||||||||| |  |||| |||| ||||||||||||||    
T  4157518 cggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtgatttt 4157456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 10133830 - 10133756
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtc-gcgtcagacaccgacac 212  Q
    |||||||||||| ||||  | |||||||||| ||||||| ||||||||||||| ||| | ||| |||||||||||    
T  10133830 acctatgaagcatgaacgttcctcagattaggtgtgtcctggtgtcggacacgcgtcagtgtctgacaccgacac 10133756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 189
Target Start/End: Original strand, 11596295 - 11596345
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggaca 189  Q
    |||||||||||||| ||||| ||||||||||  |||||||| |||||||||    
T  11596295 acctatgaagcacggacactcctcagattaggcgtgtcccgatgtcggaca 11596345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 16189765 - 16189727
Alignment:
Q  204 caccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  16189765 caccgacacacataattacactgaattatgtgattttct 16189727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 21945585 - 21945523
Alignment:
Q  178 cggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||| |||||  ||| ||||||||||| |  |||||||||||||||||| |||||    
T  21945585 cggtgtcggacatgtgtcatgtccgacaccgacacttgtaattacactgaattatgtcatttt 21945523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 13134508 - 13134467
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttctt 243  Q
    |||| ||||||||| ||||||||| |||||||||||||||||    
T  13134508 gacatcgacacatataattacactaaattatgtgattttctt 13134467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 28000672 - 28000725
Alignment:
Q  143 atgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcg 196  Q
    |||||||||| |||||  ||||||||| |||||| ||||||| |||||||||||    
T  28000672 atgaagcacggacactcatcagattaggtgtgtctcggtgtcagacacgtgtcg 28000725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 242
Target Start/End: Original strand, 30103297 - 30103397
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    ||||||||||   ||||| ||| |||||| ||||||| | |||| ||||  ||||| ||  ||||||||||||||  |||||||| ||||||||||||||    
T  30103297 ctatgaagcagagacactcctcggattagatgtgtcctgatgtcagacatatgtcgtgtttgacaccgacacatatgattacact-aattatgtgatttt 30103395  T
Q  241 ct 242  Q
    ||    
T  30103396 ct 30103397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 18576038 - 18576078
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||| ||||||| |||||||| |||||||||||||||||    
T  18576038 gacaccaacacatataattacaccgaattatgtgattttct 18576078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 22440609 - 22440641
Alignment:
Q  210 cacatagaattacactgaattatgtgattttct 242  Q
    |||||| ||||||||||||||||||||||||||    
T  22440609 cacatataattacactgaattatgtgattttct 22440641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 30982879 - 30982919
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    ||||||||||| || |||||||||||| |||||||||||||    
T  30982879 gacaccgacacttataattacactgaaatatgtgattttct 30982919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 38846971 - 38847051
Alignment:
Q  160 ctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||| | ||| | ||||||||||||||||||  || ||||| ||||| |  ||||||||||||| || |||||||    
T  38846971 ctcagattaggtatgttctggtgtcggacacgtgtcgtatccgacactgacacttgtaattacactgaataatatgatttt 38847051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 40784073 - 40784029
Alignment:
Q  140 cctatgaagcacgaacacttctcagattagctgtgtcccggtgtc 184  Q
    ||||||||||||| ||||| ||| |||||| ||||||||||||||    
T  40784073 cctatgaagcacggacactcctcggattaggtgtgtcccggtgtc 40784029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 44132645 - 44132685
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| ||||| ||||||||| ||||||||||    
T  44132645 gacaccgacacatataattatactgaattacgtgattttct 44132685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 46160954 - 46160914
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| ||| |||||||||||||| |||||||    
T  46160954 gacaccgacacatataataacactgaattatgttattttct 46160914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 3e-29; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 141 - 242
Target Start/End: Complemental strand, 7378098 - 7377997
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||  | ||||| ||| |||||||||||||| ||||||| ||||||||||||||||    
T  7378098 ctatgaagcacggacacttctcagattagccgtgtcccggtgtcggatgcatgtcgtgtccgacaccgacacatataattacattgaattatgtgatttt 7377999  T
Q  241 ct 242  Q
    ||    
T  7377998 ct 7377997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 28152217 - 28152118
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||||||||| ||| ||||||   |||||||||||||||||||||||| ||| ||||||||||| |  ||||||||||||||||||||||||    
T  28152217 ctatgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 28152118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 34595253 - 34595154
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||| ||||| ||| |||||| |||||||||||||| ||||||||||| ||| ||||||||||| |  ||||||||||||||||||||||||    
T  34595253 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 34595154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 137 - 240
Target Start/End: Complemental strand, 28715418 - 28715315
Alignment:
Q  137 ttacctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtga 236  Q
    |||||||||||||||| |||||||||  |||||  |||||||||||||| |||||||||| ||| ||||||||||| |  |||||||||||||||||| |    
T  28715418 ttacctatgaagcacgtacacttctcgaattaggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtca 28715319  T
Q  237 tttt 240  Q
    ||||    
T  28715318 tttt 28715315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 9658967 - 9658896
Alignment:
Q  172 gtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttctt 243  Q
    |||| |||||||| ||||||||||| |||  ||||||||| ||| |||||||||||||||||||||||||||    
T  9658967 gtgttccggtgtcagacacgtgtcgtgtctaacaccgacaaatataattacactgaattatgtgattttctt 9658896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 242
Target Start/End: Original strand, 7265569 - 7265634
Alignment:
Q  177 ccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttct 242  Q
    ||||||||||||| || | | ||| |||||||||||||| ||||||||||||||||||||||||||    
T  7265569 ccggtgtcggacatgtattgtgtccgacaccgacacatataattacactgaattatgtgattttct 7265634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 9025448 - 9025535
Alignment:
Q  144 tgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttct 242  Q
    ||||||||| ||||||||| ||||||  ||||||||||||||||||||           ||||||||||||| ||||||||||||||||||||||||||    
T  9025448 tgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacg-----------acaccgacacatataattacactgaattatgtgattttct 9025535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 240
Target Start/End: Original strand, 32978842 - 32978938
Alignment:
Q  144 tgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    ||||||||| ||||| ||  ||||||  |||||||||||||||||| |||||| ||| ||||||||||| |  ||||||||| ||||||||| ||||    
T  32978842 tgaagcacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacacttaattatgtgttttt 32978938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 240
Target Start/End: Original strand, 8776906 - 8777012
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtca-----gacaccgacacatagaattacactgaattatg 233  Q
    |||||||||||||| ||||| ||| |||||| |||||| ||||||||||||||||||| |||      |||||| |||| |  |||||||||||||| ||    
T  8776906 acctatgaagcacggacactcctcggattaggtgtgtctcggtgtcggacacgtgtcgtgtcgtgtccgacaccaacacttgtaattacactgaattttg 8777005  T
Q  234 tgatttt 240  Q
    |||||||    
T  8777006 tgatttt 8777012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 12627534 - 12627616
Alignment:
Q  158 ttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    ||||| ||||||  ||||| |||||||||||| |||| | ||| |||| |||||||||  |||||||||||||||||||||||    
T  12627534 ttctcggattaggagtgtctcggtgtcggacatgtgtggtgtccgacatcgacacatattattacactgaattatgtgatttt 12627616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 240
Target Start/End: Original strand, 17841530 - 17841628
Alignment:
Q  142 tatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    ||||||||||| ||||| ||| ||||||  ||||| | ||||||||||| ||||| ||| ||||||| ||| |  ||||||||| ||||||||||||||    
T  17841530 tatgaagcacggacactcctcggattaggcgtgtctcagtgtcggacacatgtcgtgtccgacaccgtcacttgtaattacactaaattatgtgatttt 17841628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 33001266 - 33001328
Alignment:
Q  178 cggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    ||||||| ||||||||||| ||| |||||||||||||| ||||||| | ||||||||||||||    
T  33001266 cggtgtcagacacgtgtcgtgtccgacaccgacacatataattacatttaattatgtgatttt 33001328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 10339052 - 10339125
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacac 212  Q
    |||||||||||||| ||||| ||| ||||||  ||||||| |||||||||| |||||| ||| |||||||||||    
T  10339052 acctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaccgacac 10339125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 242
Target Start/End: Original strand, 13360313 - 13360413
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||| |||||  || ||||||  ||||| | ||||||||||  ||| | ||| |||||||| ||||| ||||||||||||||||||||||||    
T  13360313 ctatgaagcacggacactcttcggattaggcgtgtctcagtgtcggacat-tgttgtgtctgacaccgaaacatataattacactgaattatgtgatttt 13360411  T
Q  241 ct 242  Q
    ||    
T  13360412 ct 13360413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 241
Target Start/End: Complemental strand, 7740764 - 7740660
Alignment:
Q  137 ttacctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtga 236  Q
    ||||||||||| |||| |||||||||||   ||  |||||| ||| ||||  |||||||| ||| ||||| |||||||| ||||||||| |||| |||||    
T  7740764 ttacctatgaaacacggacacttctcagggcaggcgtgtcctggtatcgggtacgtgtcgtgtccgacactgacacatataattacactcaattttgtga 7740665  T
Q  237 ttttc 241  Q
    |||||    
T  7740664 ttttc 7740660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 240
Target Start/End: Complemental strand, 16833428 - 16833328
Alignment:
Q  140 cctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattt 239  Q
    ||||||||| ||  ||||| ||| |||| | ||||||| |||||||||| ||||||| |||  |||||||||| |  |||||||||||| ||||||||||    
T  16833428 cctatgaagtacagacactcctcggattcggtgtgtcctggtgtcggacgcgtgtcgtgtctaacaccgacacttgtaattacactgaagtatgtgattt 16833329  T
Q  240 t 240  Q
    |    
T  16833328 t 16833328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 242
Target Start/End: Original strand, 17327588 - 17327696
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtc-----agacaccgacacatagaattacactgaattatg 233  Q
    |||||||||||||| ||||| ||| ||||||  ||||||| ||||| ||||||||||| |||      ||||| |||||||| | ||||||| |||||||    
T  17327588 acctatgaagcacggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgtccgacacgacactgacacatatagttacactaaattatg 17327687  T
Q  234 tgattttct 242  Q
    |||||||||    
T  17327688 tgattttct 17327696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 7977770 - 7977869
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||||||||| || |||||||  ||||  || |||||||||  ||| | ||| ||||||||||| |  |||||||||||||||||| |||||    
T  7977770 ctatgaagcacgaacactccttagattaggcgtgtttcgttgtcggacatatgttgtgtccgacaccgacacttgtaattacactgaattatgtaatttt 7977869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 242
Target Start/End: Complemental strand, 19040421 - 19040370
Alignment:
Q  191 gtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||| ||| ||||| |||||||| ||||||||||||||||||||||||||    
T  19040421 gtgtcgtgtccgacacagacacatataattacactgaattatgtgattttct 19040370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 24645600 - 24645501
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||  |||||  || ||||||  |||||  |||||||||||||||||| ||| ||||||||||| |  || || ||||||||||||||||||    
T  24645600 ctatgaagcacagacactcttcggattagacgtgtcttggtgtcggacacgtgtcgtgtctgacaccgacacttgtaactatactgaattatgtgatttt 24645501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 31959268 - 31959213
Alignment:
Q  142 tatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgc 197  Q
    ||||||||||| ||||| ||| |||||| |||||||||||||||||||| ||||||    
T  31959268 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacatgtcgc 31959213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 138 - 236
Target Start/End: Complemental strand, 4878064 - 4877967
Alignment:
Q  138 tacctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtga 236  Q
    ||||||||||||||| ||||| ||| ||||||  |||||| | ||||||||| |||||| ||| ||||||||||| |  ||||| ||| ||||||||||    
T  4878064 tacctatgaagcacggacactcctcggattaggcgtgtcctg-tgtcggacatgtgtcgtgtccgacaccgacacttgtaattatacttaattatgtga 4877967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 240
Target Start/End: Complemental strand, 7027300 - 7027262
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  7027300 gacaccgacacatataattacactgaattatgtgatttt 7027262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 243
Target Start/End: Original strand, 8389411 - 8389514
Alignment:
Q  144 tgaagcacgaacacttctcagattagctgtgtcccggtgtcggaca-cgtgtcgcgtcagacaccgac---aca-tagaattacactgaattatgtgatt 238  Q
    ||||||||| ||||| ||| |||||| ||||||||||||||||||| ||||| | ||| |||||||||   ||| || |||||||||||||||| |||||    
T  8389411 tgaagcacggacactcctcggattaggtgtgtcccggtgtcggacaccgtgttg-gtccgacaccgacatgacactataattacactgaattatatgatt 8389509  T
Q  239 ttctt 243  Q
    |||||    
T  8389510 ttctt 8389514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 242
Target Start/End: Original strand, 31579211 - 31579266
Alignment:
Q  185 ggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttct 242  Q
    ||||| |||||| ||| ||||||||||||||  |||||||||||||||||||||||||    
T  31579211 ggacatgtgtcgtgtccgacaccgacacata--attacactgaattatgtgattttct 31579266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 32511606 - 32511708
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||| ||||| ||| ||||||  |||  ||| |||| ||||  |||||  || |||||| |||| || ||||||||||||||||||||||||    
T  32511606 ctatgaagcacggacactcctccgattaggcgtgctccgatgtcagacatatgtcgtatccgacaccaacacttataattacactgaattatgtgatttt 32511705  T
Q  241 ctt 243  Q
    |||    
T  32511706 ctt 32511708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 8365446 - 8365519
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacac 212  Q
    |||||||||||||| | ||| ||| ||||||  ||||||| ||||||||||||||||| ||| || ||||||||    
T  8365446 acctatgaagcacggagactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacac 8365519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 10294239 - 10294166
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacac 212  Q
    |||||||||||||  ||||| ||||||||||||||||||  || |||||||| ||||| ||| |||||| ||||    
T  10294239 acctatgaagcacagacactcctcagattagctgtgtcctagtttcggacacatgtcgtgtccgacaccaacac 10294166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 9617492 - 9617452
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| ||||||| ||||||||||||||||||    
T  9617492 gacaccgacacatataattacattgaattatgtgattttct 9617452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 9629441 - 9629401
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| ||||||| ||||||||||||||||||    
T  9629441 gacaccgacacatataattacattgaattatgtgattttct 9629401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 242
Target Start/End: Complemental strand, 12236780 - 12236676
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtc-gcgtcagacaccgacacatagaattacactgaattatgtgat 237  Q
    |||||||||||||||||||| ||||| ||||  ||||||||||| || ||| ||||| | ||   ||| |||||||||  |||||| |||||||||| ||    
T  12236780 acctatgaagcacgaacactcctcaggttaggcgtgtcccggtgccgaacatgtgtcggtgtttaacatcgacacatacgattacattgaattatgttat 12236681  T
Q  238 tttct 242  Q
    |||||    
T  12236680 tttct 12236676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 26562747 - 26562707
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||| ||||||||| ||||||||||||||||||||||||||    
T  26562747 gacatcgacacatataattacactgaattatgtgattttct 26562707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 239
Target Start/End: Original strand, 6898220 - 6898319
Alignment:
Q  140 cctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattt 239  Q
    |||||||||||||||||||  || ||||||  ||||  |||||| |||||||  ||| ||| ||||||||||| |  ||||||||| |||||||| ||||    
T  6898220 cctatgaagcacgaacactcatcggattaggcgtgtttcggtgttggacacgcttcgtgtccgacaccgacacttgtaattacacttaattatgtaattt 6898319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 203 - 242
Target Start/End: Complemental strand, 7086852 - 7086813
Alignment:
Q  203 acaccgacacatagaattacactgaattatgtgattttct 242  Q
    ||||||||||||| ||||||||| ||||||||||||||||    
T  7086852 acaccgacacatataattacactaaattatgtgattttct 7086813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 9027286 - 9027200
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatt 238  Q
    ||||||||||| |||||| ||  ||||||| |||||||||||||||||||           |||||||||||||| |||||||| |||||||||||||    
T  9027286 ctatgaagcacaaacactccttggattagccgtgtcccggtgtcggacac-----------gacaccgacacatataattacacggaattatgtgatt 9027200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 212
Target Start/End: Original strand, 9107299 - 9107370
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacac 212  Q
    ||||||||||||  |||| ||| |||||| ||||||||||||||||||||  || | ||| |||||||||||    
T  9107299 ctatgaagcacgggcactcctcggattaggtgtgtcccggtgtcggacacacgttgtgtccgacaccgacac 9107370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 207 - 242
Target Start/End: Original strand, 11591876 - 11591911
Alignment:
Q  207 cgacacatagaattacactgaattatgtgattttct 242  Q
    ||||||||| ||||||||||||||||||||||||||    
T  11591876 cgacacatataattacactgaattatgtgattttct 11591911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 242
Target Start/End: Original strand, 13364643 - 13364746
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatt 238  Q
    |||||||||||||  |||||  || || |||  |||||| |||||| |||| || ||| |||  |||||||||||||  ||||||||||||||| |||||    
T  13364643 acctatgaagcacagacactcgtcggaatagacgtgtcctggtgtcagacatgtatcgtgtccaacaccgacacatatgattacactgaattatatgatt 13364742  T
Q  239 ttct 242  Q
    ||||    
T  13364743 ttct 13364746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 212
Target Start/End: Complemental strand, 16766827 - 16766756
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacac 212  Q
    |||||||||||| ||| |  || ||||||  ||||||||||||||||||||||| | ||| |||||||||||    
T  16766827 ctatgaagcacggacattcttcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacac 16766756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 29020994 - 29020932
Alignment:
Q  178 cggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||| |||||||||| ||| |||||  |||| || ||||||||||||||||| ||||||    
T  29020994 cggtgtcgaacacgtgtcgtgtccgacacaaacacctataattacactgaattatgcgatttt 29020932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 30851674 - 30851619
Alignment:
Q  186 gacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttctt 243  Q
    ||||||||||| ||| |||||||||||||| ||||||| |||||  ||||||||||||    
T  30851674 gacacgtgtcgtgtccgacaccgacacatataattacattgaat--tgtgattttctt 30851619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 242
Target Start/End: Original strand, 7996353 - 7996419
Alignment:
Q  172 gtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttct 242  Q
    ||||||| ||||  |||||||||||||    |||||||| |||| |||||||||||||||| |||||||||    
T  7996353 gtgtccccgtgttagacacgtgtcgcg----acaccgacgcatataattacactgaattatatgattttct 7996419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 242
Target Start/End: Complemental strand, 8022448 - 8022382
Alignment:
Q  172 gtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttct 242  Q
    ||||||| ||||  |||||||||||||    |||||||| |||| |||||||||||||||| |||||||||    
T  8022448 gtgtccccgtgttagacacgtgtcgcg----acaccgacgcatataattacactgaattatatgattttct 8022382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 5000557 - 5000625
Alignment:
Q  143 atgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgaca 211  Q
    ||||||||||||||||  || ||||||  |||||| ||||||||| | |||||| ||| ||||||||||    
T  5000557 atgaagcacgaacactcttcggattagacgtgtcctggtgtcggatatgtgtcgtgtctgacaccgaca 5000625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 5732511 - 5732551
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| ||||||||| || |||||||||||||    
T  5732511 gacaccgacacatataattacactaaaatatgtgattttct 5732551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 9195755 - 9195795
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| ||||||||| |||||||| |||||||    
T  9195755 gacaccgacacatataattacactaaattatgtcattttct 9195795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 13851798 - 13851754
Alignment:
Q  198 gtcagacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||| ||||||||| ||||||||||||||| || |||||||    
T  13851798 gtcagacatcgacacatataattacactgaattacgttattttct 13851754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 16488591 - 16488631
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| |||||||||| ||| |||||||||||    
T  16488591 gacaccgacacatataattacactgcattttgtgattttct 16488631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 18367894 - 18367854
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| |||||||||| ||| |||||||||||    
T  18367894 gacaccgacacatataattacactgcattttgtgattttct 18367854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 19044522 - 19044482
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| ||| ||||||||||||||||| ||||    
T  19044522 gacaccgacacatataataacactgaattatgtgatattct 19044482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 21924936 - 21924976
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| |||||||||||||||| |||| ||||    
T  21924936 gacaccgacacatataattacactgaattatttgatattct 21924976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Original strand, 30866149 - 30866185
Alignment:
Q  206 ccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  30866149 ccgacacatataattacattgaattatgtgattttct 30866185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 34073348 - 34073388
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    ||||||||| |||| ||||||||||||||||| ||||||||    
T  34073348 gacaccgacccatataattacactgaattatgagattttct 34073388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 34894968 - 34895016
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggaca 189  Q
    |||||||||||| ||||| |||| ||||| |||||||| ||||||||||    
T  34894968 ctatgaagcacggacactcctcatattaggtgtgtccctgtgtcggaca 34895016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 138 - 240
Target Start/End: Original strand, 40993272 - 40993374
Alignment:
Q  138 tacctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgat 237  Q
    ||||||||||||| | ||||| ||| ||||||  |||||||||||||||||| |||||| ||| |||||||||||||| |||||||||||||||||||||    
T  40993272 tacctatgaagcatggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgat 40993371  T
Q  238 ttt 240  Q
    |||    
T  40993372 ttt 40993374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 18427068 - 18426969
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    ||||||| |||| ||||| |||||||||| |||||||||||| |||||||||||||  || |||||||||| ||| |||||||| |||||||||||||||    
T  18427068 ctatgaaacacggacactcctcagattaggtgtgtcccggtgccggacacgtgtcgtatccgacaccgacatatataattacaccgaattatgtgatttt 18426969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 136 - 240
Target Start/End: Complemental strand, 55401199 - 55401095
Alignment:
Q  136 tttacctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtg 235  Q
    |||| |||||||||||| ||||| ||| ||||||  ||||| ||||||||||||||||||| ||| ||||||||||| |  ||||||||| |||||||||    
T  55401199 tttagctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtg 55401100  T
Q  236 atttt 240  Q
    |||||    
T  55401099 atttt 55401095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 242
Target Start/End: Complemental strand, 35223057 - 35222956
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||| ||||| ||| ||| |   ||||||| ||||| ||||||||||  ||| |||||||||||||| ||||||| ||||||||||||||||    
T  35223057 ctatgaagcacggacactcctcggataaagcgtgtccccgtgtcagacacgtgtcatgtccgacaccgacacatataattacattgaattatgtgatttt 35222958  T
Q  241 ct 242  Q
    ||    
T  35222957 ct 35222956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 142 - 242
Target Start/End: Original strand, 8789489 - 8789591
Alignment:
Q  142 tatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgt--cgcgtcagacaccgacacatagaattacactgaattatgtgattt 239  Q
    ||||||||||| ||||| ||| ||||||  ||||| ||||||| |||| ||||  || ||| |||||||||||||| |||||||| ||||||||||||||    
T  8789489 tatgaagcacggacactcctcggattaggcgtgtctcggtgtccgacatgtgtgtcgtgtccgacaccgacacatataattacacggaattatgtgattt 8789588  T
Q  240 tct 242  Q
    |||    
T  8789589 tct 8789591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 20503584 - 20503485
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||| ||||| ||| ||||||  ||||||||||||| |||| |||||| |||  |||||||||| |  |||||||||||||||||| |||||    
T  20503584 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtcatttt 20503485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 242
Target Start/End: Complemental strand, 11252095 - 11251996
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||  ||||| ||| ||||||  |||| ||| || ||||||||||| | ||| |||||||||||||  ||||||||||||||||||||||||    
T  11252095 ctatgaagcacagacactcctcggattaggcgtgttccgatgccggacacgtgttgtgtctgacaccgacacat--aattacactgaattatgtgatttt 11251998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 212
Target Start/End: Original strand, 41961576 - 41961650
Alignment:
Q  138 tacctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacac 212  Q
    ||||||||||||||| ||||||||| ||||||  ||||||| ||||||||||||||||| ||| || ||||||||    
T  41961576 tacctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacac 41961650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 242
Target Start/End: Complemental strand, 25093617 - 25093520
Alignment:
Q  145 gaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttct 242  Q
    ||||||||||||||  |||||||||  |||   | |||||||||| |||| | ||| |||||||||||||| |||||||||||||| |||||||||||    
T  25093617 gaagcacgaacactcttcagattagaagtgcttcagtgtcggacatgtgttgtgtccgacaccgacacatataattacactgaattgtgtgattttct 25093520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 240
Target Start/End: Complemental strand, 10955040 - 10954972
Alignment:
Q  172 gtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    ||||||| ||||||||||||||||| ||| ||||||||||| |   |||||||||||||||||||||||    
T  10955040 gtgtcccagtgtcggacacgtgtcgtgtccgacaccgacacttgtgattacactgaattatgtgatttt 10954972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 25775624 - 25775531
Alignment:
Q  143 atgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatt 238  Q
    |||||||||||||||| ||| ||||||  |||||| ||||||||||||  | || ||| ||||||||||| |  ||||||||||||||||||||||    
T  25775624 atgaagcacgaacactcctcggattaggcgtgtcctggtgtcggacac--gacgtgtccgacaccgacacttgtaattacactgaattatgtgatt 25775531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 27505370 - 27505266
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacac-----cgacacatagaattacactgaattatgtg 235  Q
    |||||||||||| ||||| ||| ||||||   |||||||||||||||||||||||| |||||||||     |||||| |  ||||||||| |||||||||    
T  27505370 ctatgaagcacggacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgtcagacacgacaccgacacttgtaattacacttaattatgtg 27505271  T
Q  236 atttt 240  Q
    |||||    
T  27505270 atttt 27505266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 45451642 - 45451571
Alignment:
Q  171 tgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||| |||||||||||| |||||| ||| ||||||||||||||  |||| |||||| |||||||||||||    
T  45451642 tgtgtctcggtgtcggacatgtgtcgtgtccgacaccgacacatattattatactgaagtatgtgattttct 45451571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 242
Target Start/End: Complemental strand, 2941637 - 2941576
Alignment:
Q  181 tgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||| ||||||||||| ||| |||||||||||||| |||||||||| ||| |||||||||||    
T  2941637 tgtcagacacgtgtcgtgtccgacaccgacacatataattacactgtattttgtgattttct 2941576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 242
Target Start/End: Original strand, 13845465 - 13845566
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||| ||||| ||  ||| ||  ||||| | ||||| ||||||| ||| ||| |||||||||||||| |||||||||| ||| |||||||||    
T  13845465 ctatgaagcacggacactccttggataaggcgtgtctccgtgtcagacacgtctcgtgtccgacaccgacacatataattacactgcattttgtgatttt 13845564  T
Q  241 ct 242  Q
    ||    
T  13845565 ct 13845566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 14209245 - 14209172
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacac 212  Q
    |||||||||||||| ||||||||  |||||| ||| ||||| ||||| |||||||||| ||| |||||||||||    
T  14209245 acctatgaagcacggacacttcttggattaggtgtatcccgatgtcgtacacgtgtcgtgtccgacaccgacac 14209172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 25074914 - 25074841
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtg-tcgcgtcagacaccgacaca 213  Q
    |||||||||||||||||| ||| |||||| |||||||| |||||||||||| | | | ||||||||||||||||    
T  25074914 ctatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacgcgttggtgtcagacaccgacaca 25074841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 40052433 - 40052380
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgt 192  Q
    |||||||||||||||||||| ||| ||||||  |||||||||||||||||||||    
T  40052433 acctatgaagcacgaacactcctcggattaggcgtgtcccggtgtcggacacgt 40052380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 49651714 - 49651771
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcg 196  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||||||| | ||||||    
T  49651714 acctatgaagcacggacacttctcggattaggtgtgtcccggtgtcggatatgtgtcg 49651771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 236
Target Start/End: Complemental strand, 3631772 - 3631708
Alignment:
Q  172 gtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtga 236  Q
    |||||| ||||||||||| |||||| ||| ||||| | |||||| ||||||||||||||||||||    
T  3631772 gtgtcctggtgtcggacatgtgtcgtgtccgacactggcacatataattacactgaattatgtga 3631708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 206
Target Start/End: Complemental strand, 14217021 - 14216957
Alignment:
Q  142 tatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacac 206  Q
    ||||||||||| ||||||||| |||||| |||||||| |||||| |||||||||| ||| |||||    
T  14217021 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacac 14216957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 206
Target Start/End: Complemental strand, 14223150 - 14223086
Alignment:
Q  142 tatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacac 206  Q
    ||||||||||| ||||||||| |||||| |||||||| |||||| |||||||||| ||| |||||    
T  14223150 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacac 14223086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 28918120 - 28918021
Alignment:
Q  143 atgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtca--gacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||| | ||||| ||  ||||||  ||||||| ||||||||||||||||| |||   ||||||||||| |  ||||||||||||||||||||||||    
T  28918120 atgaagcagggacactccttggattaggcgtgtcccagtgtcggacacgtgtcgtgtccacgacaccgacacttgtaattacactgaattatgtgatttt 28918021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 29508567 - 29508464
Alignment:
Q  143 atgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacac------cgacacatagaattacactgaattatgtga 236  Q
    |||||||||| ||||||||  ||||||  |||||||||||||||||  |||||| ||| |||||      ||||||||| |||||||||||||||| |||    
T  29508567 atgaagcacggacacttcttggattagacgtgtcccggtgtcggacgtgtgtcgtgtccgacaccaacatcgacacatataattacactgaattatatga 29508468  T
Q  237 tttt 240  Q
    ||||    
T  29508467 tttt 29508464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 240
Target Start/End: Complemental strand, 7928508 - 7928470
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  7928508 gacaccgacacatataattacactgaattatgtgatttt 7928470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 17276846 - 17276792
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtc 195  Q
    |||||||||||| ||||||||| |||||| || ||| ||||||||||||||||||    
T  17276846 ctatgaagcacggacacttctcggattaggtgcgtctcggtgtcggacacgtgtc 17276792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 4987222 - 4987291
Alignment:
Q  143 atgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacac 212  Q
    |||||| ||| ||||| ||| ||||||  ||||||||||||||||||||||||| |||  ||||||||||    
T  4987222 atgaagtacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacac 4987291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 240
Target Start/End: Complemental strand, 7171621 - 7171521
Alignment:
Q  140 cctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattt 239  Q
    |||||||||||   ||||| ||  ||||||  ||||| ||||||||||||||||||| ||| |||||| |||| |  |||||||| ||||||| ||||||    
T  7171621 cctatgaagcatatacactccttggattaggcgtgtcgcggtgtcggacacgtgtcgtgtccgacaccaacacttgtaattacaccgaattatatgattt 7171522  T
Q  240 t 240  Q
    |    
T  7171521 t 7171521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 23657858 - 23657762
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgat 237  Q
    |||||||| ||| |||||| || |||||| ||||||||||| |||||||  ||||  ||| |||||||| |  || |||||||||||||||| ||||    
T  23657858 ctatgaagtacggacacttttcggattaggtgtgtcccggtatcggacaaatgtcatgtccgacaccgatatttataattacactgaattatatgat 23657762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 3865749 - 3865698
Alignment:
Q  185 ggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtga 236  Q
    |||||||||||| ||||||||||||||| |  ||||| ||||||||||||||    
T  3865749 ggacacgtgtcgtgtcagacaccgacacttgtaattatactgaattatgtga 3865698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 212
Target Start/End: Complemental strand, 25065037 - 25064966
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacac 212  Q
    ||||| |||||||||||| ||| ||| | | ||||||||||||| ||||||||||| ||| |||||| ||||    
T  25065037 ctatggagcacgaacactcctcggataaaccgtgtcccggtgtcagacacgtgtcgtgtccgacaccaacac 25064966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 4466540 - 4466642
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||| ||||| |||  || ||| ||||||| ||||||||||| | | |  || ||||||| |||||| |  ||||||||||||| |||||||    
T  4466540 ctatgaagcacggacactcctcgaataagccgtgtcccagtgtcggacacatcttgtatccgacaccggcacatatagctacactgaattatatgatttt 4466639  T
Q  241 ctt 243  Q
    |||    
T  4466640 ctt 4466642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 8101892 - 8101946
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtc 195  Q
    |||||||||||||||||| ||||||||||  |||| || ||||| ||||||||||    
T  8101892 ctatgaagcacgaacactcctcagattagacgtgtaccagtgtccgacacgtgtc 8101946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 191
Target Start/End: Complemental strand, 11610628 - 11610578
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacg 191  Q
    |||||||||||| ||||| ||||||||||  |||||||| |||||||||||    
T  11610628 ctatgaagcacggacactcctcagattaggcgtgtcccgatgtcggacacg 11610578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 34185052 - 34185106
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtc 195  Q
    |||||||||||| ||||| ||| ||||||  ||||||||||||||||||| ||||    
T  34185052 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacatgtc 34185106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 240
Target Start/End: Complemental strand, 38731276 - 38731238
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||||| || |||||||||||||||||||||    
T  38731276 gacaccgacacatataactacactgaattatgtgatttt 38731238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 242
Target Start/End: Original strand, 6780403 - 6780460
Alignment:
Q  185 ggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||| | ||| |||||| ||||||| |||||||||||| || ||||||||||    
T  6780403 ggacacgtgttgtgtccgacaccaacacatataattacactgaactacgtgattttct 6780460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 7614416 - 7614457
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttctt 243  Q
    |||||||||| ||| ||||| |||||||||||||||||||||    
T  7614416 gacaccgacatatataattatactgaattatgtgattttctt 7614457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 10690266 - 10690303
Alignment:
Q  205 accgacacatagaattacactgaattatgtgattttct 242  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  10690266 accgacaaatataattacactgaattatgtgattttct 10690303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 52369908 - 52369851
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcg 196  Q
    |||||||||||||| ||||| ||| || ||| ||||||||||||| ||||||| ||||    
T  52369908 acctatgaagcacggacactcctcggaataggtgtgtcccggtgttggacacgcgtcg 52369851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 8039836 - 8039876
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| |||||||||||||||| | |||||||    
T  8039836 gacaccgacacatataattacactgaattatataattttct 8039876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 8383315 - 8383275
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    ||||||||||| || |||||||||||||||| |||||||||    
T  8383315 gacaccgacacttataattacactgaattatatgattttct 8383275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 241
Target Start/End: Complemental strand, 8842448 - 8842348
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||| ||||| ||| ||||||  ||||| |  | ||  ||| |||||| ||| |||||||||| ||| ||||||||  ||||||||||||||    
T  8842448 ctatgaagcacggacactcctcggattaggcgtgtctcaatatctaacatgtgtcgtgtctgacaccgacatatataattacaccaaattatgtgatttt 8842349  T
Q  241 c 241  Q
    |    
T  8842348 c 8842348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 8903554 - 8903514
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggt 181  Q
    |||||||||||||||||| ||| |||||| |||||||||||    
T  8903554 ctatgaagcacgaacactcctcggattaggtgtgtcccggt 8903514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 241
Target Start/End: Original strand, 11507479 - 11507515
Alignment:
Q  205 accgacacatagaattacactgaattatgtgattttc 241  Q
    ||||| ||||| |||||||||||||||||||||||||    
T  11507479 accgaaacatataattacactgaattatgtgattttc 11507515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 13414527 - 13414487
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| ||||||| |||||||| |||||||||    
T  13414527 gacaccgacacatataattacattgaattatttgattttct 13414487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 14028065 - 14028025
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| |||||||||| ||| |||||||||||    
T  14028065 gacaccgacacatataattacactgcattttgtgattttct 14028025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 212
Target Start/End: Complemental strand, 14832198 - 14832158
Alignment:
Q  172 gtgtcccggtgtcggacacgtgtcgcgtcagacaccgacac 212  Q
    ||||||||||||||||||||||||| ||| || ||||||||    
T  14832198 gtgtcccggtgtcggacacgtgtcgtgtccgataccgacac 14832158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 206
Target Start/End: Original strand, 16192667 - 16192727
Alignment:
Q  146 aagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacac 206  Q
    |||||| |||||| |||| ||||| | |||||||||||| ||||||||||| ||| |||||    
T  16192667 aagcacaaacactcctcatattaggtatgtcccggtgtcagacacgtgtcgtgtctgacac 16192727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 20691377 - 20691337
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    ||||||||||||||  ||||||||||||||||| |||||||    
T  20691377 gacaccgacacatatgattacactgaattatgtcattttct 20691337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 242
Target Start/End: Original strand, 24204983 - 24205082
Alignment:
Q  143 atgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtc-gcgtcagacaccgacacatagaattacactgaattatgtgattttc 241  Q
    |||||||||| ||||| |||  |||||  |||||| ||||||||||||| ||| | ||| |||| |||||| || |||||||||| ||||||| ||||||    
T  24204983 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcggacacgcgtcagtgtccgaca-cgacacttataattacactgtattatgtcattttc 24205081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 240
Target Start/End: Original strand, 24633372 - 24633440
Alignment:
Q  172 gtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||| |||||||  |||| |||||| |||  ||||||||||||| ||||||| ||||||| ||||||||    
T  24633372 gtgtaccggtgttagacaagtgtcgtgtccaacaccgacacatataattacattgaattacgtgatttt 24633440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 25211648 - 25211604
Alignment:
Q  142 tatgaagcacgaacacttctcagattagctgtgtcccggtgtcgg 186  Q
    |||||||||| |||||||||||||||||  |||||| ||||||||    
T  25211648 tatgaagcacaaacacttctcagattaggcgtgtcctggtgtcgg 25211604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 49505155 - 49505195
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    ||||| |||||||| ||||||||| ||||||||||||||||    
T  49505155 gacactgacacatataattacactaaattatgtgattttct 49505195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 143 - 241
Target Start/End: Original strand, 29163323 - 29163421
Alignment:
Q  143 atgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttc 241  Q
    |||||||||||||||||||| ||||||| ||||||||||||| | ||||||||| ||| |||||||||||||| ||||| | |||||||||||||||||    
T  29163323 atgaagcacgaacacttctctgattagccgtgtcccggtgtcaggcacgtgtcgtgtccgacaccgacacatataattaaattgaattatgtgattttc 29163421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 139 - 240
Target Start/End: Original strand, 5898204 - 5898305
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatt 238  Q
    |||||| ||||||| ||||| ||| ||||||  |||||||||||| |||||||||||| ||| ||||||||| |||| ||||||||||||||||||||||    
T  5898204 acctataaagcacggacactcctcggattagacgtgtcccggtgttggacacgtgtcgtgtctgacaccgacgcatataattacactgaattatgtgatt 5898303  T
Q  239 tt 240  Q
    ||    
T  5898304 tt 5898305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 140 - 240
Target Start/End: Complemental strand, 1815377 - 1815277
Alignment:
Q  140 cctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattt 239  Q
    |||||||| ||||  |||| ||||||||||  |||||||||||||||||| |||||| ||| ||||||||||| |  |||||||||||||||||||||||    
T  1815377 cctatgaatcacggtcactcctcagattaggcgtgtcccggtgtcggacatgtgtcgtgtcggacaccgacacttgtaattacactgaattatgtgattt 1815278  T
Q  240 t 240  Q
    |    
T  1815277 t 1815277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 240
Target Start/End: Complemental strand, 51410146 - 51410045
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatt 238  Q
    |||||||||||||||| ||| ||  ||||||  ||||| |||||||||| |||||||| ||| ||||||||||| |  ||||||||||||||||||||||    
T  51410146 acctatgaagcacgaatactccttggattaggcgtgtctcggtgtcggatacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatt 51410047  T
Q  239 tt 240  Q
    ||    
T  51410046 tt 51410045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 138 - 242
Target Start/End: Original strand, 2896058 - 2896162
Alignment:
Q  138 tacctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgat 237  Q
    |||||||||| || | ||||||||  |||||| ||||||||||| |||||||| ||||| ||| |||||||||| ||| |  ||||||||||||||||||    
T  2896058 tacctatgaaacatggacacttcttggattaggtgtgtcccggtctcggacacatgtcgtgtctgacaccgacatatatagctacactgaattatgtgat 2896157  T
Q  238 tttct 242  Q
    |||||    
T  2896158 tttct 2896162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 142 - 238
Target Start/End: Complemental strand, 12919063 - 12918967
Alignment:
Q  142 tatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatt 238  Q
    ||||||||||||||||||||| ||| ||| ||||||| ||||| ||||||||||| ||| || ||| ||||||| ||| ||| ||||||||||||||    
T  12919063 tatgaagcacgaacacttctcggataagccgtgtccccgtgtcagacacgtgtcgtgtccgataccaacacatataatcacattgaattatgtgatt 12918967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 140 - 240
Target Start/End: Complemental strand, 37598951 - 37598852
Alignment:
Q  140 cctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattt 239  Q
    ||||||||||||| ||||| ||| ||||||  |||||||  |||||||||||||||| ||| ||||||||||| || |||||||||||||| ||||||||    
T  37598951 cctatgaagcacggacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaatt-tgtgattt 37598853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 242
Target Start/End: Complemental strand, 40181976 - 40181889
Alignment:
Q  155 cacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||| ||| ||||||  |||||||||||| |||||||||| | ||| |||||||| ||||| ||||||||||||||||||||||||||    
T  40181976 cactcctcggattaggcgtgtcccggtgtaggacacgtgttgtgtccgacaccgatacatataattacactgaattatgtgattttct 40181889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 142 - 240
Target Start/End: Original strand, 40258874 - 40258972
Alignment:
Q  142 tatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    ||||||||| | ||||| ||| ||||||  |||||| ||||||||||| |||||| ||| ||||||||||| |  ||||||||||||||||||||||||    
T  40258874 tatgaagcatggacactcctcggattaggcgtgtcctggtgtcggacaggtgtcgtgtctgacaccgacacttgtaattacactgaattatgtgatttt 40258972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 18190048 - 18190147
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    ||||||||| |  ||||| ||| |||||| |||||||||||||||||||||||| | ||| |||| |||||| |  |||||||||||||||||| |||||    
T  18190048 ctatgaagcgcatacactcctcggattaggtgtgtcccggtgtcggacacgtgttgtgtctgacatcgacacttgtaattacactgaattatgtaatttt 18190147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 18337448 - 18337349
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||| ||||| ||| ||| ||   |||||| ||||||||||||||| | ||| ||||||||||| |  ||||||||||||||||||||||||    
T  18337448 ctatgaagcacggacactcctcggatcaggcatgtcccagtgtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 18337349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 22515827 - 22515926
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||| ||||| ||| ||||||  ||||| |||||||||| | |||||| ||| ||||||||||| |  ||||||||| ||||||||||||||    
T  22515827 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgatttt 22515926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 1486646 - 1486748
Alignment:
Q  143 atgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtc-----agacaccgacacatagaattacactgaattatgtgat 237  Q
    |||||||||  ||||| ||| ||||||  ||||||||||||||||||||||||| |||      ||||||||||| || |||||||||||||||||||||    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttataattacactgaattatgtgat 1486745  T
Q  238 ttt 240  Q
    |||    
T  1486746 ttt 1486748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 240
Target Start/End: Complemental strand, 9828176 - 9828064
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtc-----------agacaccgacacatagaattacactga 227  Q
    |||||||||||||| ||||| ||| ||||||  ||||||||||||||||||||||||| |||            |||||||||||||| |||||||||||    
T  9828176 acctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacacgacaccgacacataaaattacactga 9828077  T
Q  228 attatgtgatttt 240  Q
    |||||||||||||    
T  9828076 attatgtgatttt 9828064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 180 - 242
Target Start/End: Complemental strand, 36878541 - 36878479
Alignment:
Q  180 gtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||| || ||| ||||||||||||||| || ||||||||||||||||||||||||||    
T  36878541 gtgtcggacatgtttcgtgtcagacaccgacacctataattacactgaattatgtgattttct 36878479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 42359391 - 42359488
Alignment:
Q  143 atgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||| ||||| ||| ||||||  |||||||||||||||||||  |||  ||| ||||||||||| |  |||||||||||||| |||||||||    
T  42359391 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacacgtcttgtccgacaccgacacttgtaattacactgaattttgtgatttt 42359488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 198
Target Start/End: Complemental strand, 17778670 - 17778615
Alignment:
Q  143 atgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcg 198  Q
    |||||||||||||||||||| ||||||   ||||||||||||||||||||||||||    
T  17778670 atgaagcacgaacacttctcggattaggcatgtcccggtgtcggacacgtgtcgcg 17778615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 38078601 - 38078700
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||||| ||| ||| ||||||  |||||| ||||| | ||| |||||| ||| ||||||||||| |  ||||||| ||||||||||||||||    
T  38078601 ctatgaagcacgaatactcctcggattaggcgtgtcctggtgttgaacatgtgtcgtgtccgacaccgacacttgtaattacattgaattatgtgatttt 38078700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 46348323 - 46348422
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||| ||||  ||| ||| ||  ||||| ||||||||||||||||||| ||| ||||||||||| |  ||||||||| |||||| |||||||    
T  46348323 ctatgaagcacggacacacctcggatcaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatatgatttt 46348422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 40917881 - 40917808
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacac 212  Q
    |||||||||||||| ||| | ||| ||||||  ||||||||||||||||||||||||| |||  ||||||||||    
T  40917881 acctatgaagcacggacagtcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacac 40917808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 52903365 - 52903269
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||| |||||  ||  || ||| |||||||||||||||||||  ||   ||| |||||||||||||| |||||||||||||||| |||||||    
T  52903365 ctatgaagcacggacactcttcgaataagccgtgtcccggtgtcggacacacgt---gtccgacaccgacacatataattacactgaattatatgatttt 52903269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 6427595 - 6427539
Alignment:
Q  140 cctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcg 196  Q
    ||||||||||||| |||||  |||||||||  |||||||||||||||||||||||||    
T  6427595 cctatgaagcacggacactcatcagattaggcgtgtcccggtgtcggacacgtgtcg 6427539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 10233374 - 10233271
Alignment:
Q  142 tatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgc-gtcag--acaccgacacatagaattacactgaattatgtgatt 238  Q
    ||||||||||| ||||| ||| |||||| ||||||| |||||||||||| || | | | ||   |||| |||||||| ||||||||||||||||||||||    
T  10233374 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacacatgacaccgacaccaacacagacacatataattacactgaattatgtgatt 10233275  T
Q  239 ttct 242  Q
    ||||    
T  10233274 ttct 10233271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 242
Target Start/End: Original strand, 20157283 - 20157391
Alignment:
Q  140 cctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgc-----gtca-gacaccgacacatagaattacactgaattatg 233  Q
    ||||||||||||| | ||| |||| ||||| |||||| |||||||||||||| ||||      | || ||||||||||||||  ||||||||||||||||    
T  20157283 cctatgaagcacggatactcctcaaattaggtgtgtctcggtgtcggacacgcgtcggtgtcggacacgacaccgacacatatgattacactgaattatg 20157382  T
Q  234 tgattttct 242  Q
    |||||||||    
T  20157383 tgattttct 20157391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 30749898 - 30749858
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  30749898 gacaccgacacatataattacactgaattatgtgattttct 30749858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 30771349 - 30771309
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  30771349 gacaccgacacatataattacactgaattatgtgattttct 30771309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 32461393 - 32461465
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacaca 213  Q
    |||||||||||| ||||||||  ||||||  ||||||| ||||| ||||||||||| ||| ||||||||||||    
T  32461393 ctatgaagcacggacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccgacaca 32461465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 34371771 - 34371731
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  34371771 gacaccgacacatataattacactgaattatgtgattttct 34371731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 44482288 - 44482248
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  44482288 gacaccgacacatataattacactgaattatgtgattttct 44482248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 242
Target Start/End: Original strand, 1864882 - 1864921
Alignment:
Q  203 acaccgacacatagaattacactgaattatgtgattttct 242  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  1864882 acaccgacacatataattacactgaattatgtgattttct 1864921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 241
Target Start/End: Original strand, 17705576 - 17705626
Alignment:
Q  190 cgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttc 241  Q
    ||||||||||| ||||| |||||||| |||||||||||||||||||||||||    
T  17705576 cgtgtcgcgtccgacac-gacacatataattacactgaattatgtgattttc 17705626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 208
Target Start/End: Original strand, 18556385 - 18556452
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccg 208  Q
    |||||||||||| ||||||||| ||||||  ||||||| |||||||| |||||||| ||| |||||||    
T  18556385 ctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggatacgtgtcgggtctgacaccg 18556452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 1209867 - 1209821
Alignment:
Q  146 aagcacgaacacttctcagattagctgtgtcccggtgtcggacacgt 192  Q
    ||||||||||||||||| |||||| ||||||| ||||||||||||||    
T  1209867 aagcacgaacacttctcggattaggtgtgtcctggtgtcggacacgt 1209821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 242
Target Start/End: Original strand, 7918153 - 7918252
Alignment:
Q  140 cctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtca-gacaccgacacatagaattacactgaattatgtgatt 238  Q
    ||||||||||||| ||||| ||| |||||| ||||||| |||||| || ||||     | || ||||| |||||||| ||||||||||||||||||||||    
T  7918153 cctatgaagcacggacactcctcggattaggtgtgtcctggtgtcagaaacgtt----gacacgacactgacacatataattacactgaattatgtgatt 7918248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 138 - 242
Target Start/End: Original strand, 9690210 - 9690313
Alignment:
Q  138 tacctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtc-gcgtcagacaccgacacatagaattacactgaattatgtga 236  Q
    |||||||||||||| ||||||   | ||||||  |||||||||||||||||||||||| | | | ||| ||||||||||  ||||||||||||  |||||    
T  9690210 tacctatgaagcacaaacactctccggattaggcgtgtcccggtgtcggacacgtgtcagtggccgacgccgacacatatgattacactgaat--tgtga 9690307  T
Q  237 ttttct 242  Q
    ||||||    
T  9690308 ttttct 9690313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 242
Target Start/End: Original strand, 43492465 - 43492535
Alignment:
Q  172 gtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||| ||||||||||||| |||| | ||| |||||||||||| | |||||||| |||||| ||||||||||    
T  43492465 gtgtgccggtgtcggacatgtgttgtgtctgacaccgacacacataattacaccgaattacgtgattttct 43492535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 243
Target Start/End: Complemental strand, 2784662 - 2784573
Alignment:
Q  154 acacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttctt 243  Q
    |||||||||| ||||  |||||||  |||||||| ||  || | ||| |||||||||||||| ||||| ||| |||||||||||||||||    
T  2784662 acacttctcaaattaagtgtgtcctagtgtcggatacacgttgtgtctgacaccgacacatataattatactcaattatgtgattttctt 2784573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 240
Target Start/End: Complemental strand, 13997940 - 13997903
Alignment:
Q  203 acaccgacacatagaattacactgaattatgtgatttt 240  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  13997940 acaccgacacatataattacactgaattatgtgatttt 13997903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 242
Target Start/End: Original strand, 10577676 - 10577776
Alignment:
Q  142 tatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttc 241  Q
    ||||||||||| ||||| ||  ||| ||  ||||||| ||||| |||||| |||| ||| | | |||||||||| |||||||||| ||| ||||||||||    
T  10577676 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgcgtcgtgtccgcccccgacacatataattacactgcattttgtgattttc 10577775  T
Q  242 t 242  Q
    |    
T  10577776 t 10577776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 23636050 - 23636090
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| |||||||||||||||||| |||||||    
T  23636050 gacaccgacacatacaattacactgaattatgtaattttct 23636090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 25361944 - 25361904
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    ||||| |||||||| ||||||||||||||||||||||||||    
T  25361944 gacactgacacatataattacactgaattatgtgattttct 25361904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 39953147 - 39953187
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| ||||||||| ||||||||||||||||    
T  39953147 gacaccgacacatacaattacactaaattatgtgattttct 39953187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 5944413 - 5944303
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcg----cgtca-------gacaccgacacatagaattacactgaat 229  Q
    |||||||||||||||||| ||| ||||||  || ||||||||||||||| |||| |    |||||       ||||||||||| || |||||||||||||    
T  5944413 ctatgaagcacgaacactcctcggattaggcgtatcccggtgtcggacatgtgttgtgtccgtcatcgacacgacaccgacacttataattacactgaat 5944314  T
Q  230 tatgtgatttt 240  Q
    |||||||||||    
T  5944313 tatgtgatttt 5944303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 242
Target Start/End: Original strand, 19562556 - 19562662
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcg----cgtca--gacaccgacacatagaattacactgaattatgt 234  Q
    ||||||||||||| |||| ||| |||||| |||||||| ||||||||||||||| |    || ||  |||||| ||||||| |||||||||||| ||||     
T  19562556 ctatgaagcacga-cactcctcggattaggtgtgtccctgtgtcggacacgtgttgtatccgacactgacacctacacatataattacactgaactatga 19562654  T
Q  235 gattttct 242  Q
    ||||||||    
T  19562655 gattttct 19562662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 191
Target Start/End: Original strand, 46940747 - 46940798
Alignment:
Q  140 cctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacg 191  Q
    ||||||||||||||||||| ||| ||||||  |||| |||||||||||||||    
T  46940747 cctatgaagcacgaacactcctcggattaggcgtgttccggtgtcggacacg 46940798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 212
Target Start/End: Complemental strand, 47989627 - 47989556
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacac 212  Q
    |||||||||||| ||||| ||| ||||||  |||||||| |||| |||| |||||| ||| |||||||||||    
T  47989627 ctatgaagcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacac 47989556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 19637887 - 19637785
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||| |||| || ||| ||| ||||||  | |||||||||||||| | || ||| ||| ||||||||||||||  |||||| ||||| |||| |||||    
T  19637887 ctatgatgcacaaatactcctcggattaggggcgtcccggtgtcggatatgtatcgtgtccgacaccgacacatatgattacattgaataatgtcatttt 19637788  T
Q  241 ctt 243  Q
    |||    
T  19637787 ctt 19637785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 192
Target Start/End: Original strand, 23219608 - 23219654
Alignment:
Q  146 aagcacgaacacttctcagattagctgtgtcccggtgtcggacacgt 192  Q
    |||||| |||||||||| |||||| |||||| |||||||||||||||    
T  23219608 aagcacaaacacttctcggattaggtgtgtcacggtgtcggacacgt 23219654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 240
Target Start/End: Complemental strand, 26830701 - 26830608
Alignment:
Q  146 aagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    ||||||| ||||| ||| ||||||  |||||||||| ||| |||||||| | ||| ||||| ||||| || ||||||| | ||||||||||||||    
T  26830701 aagcacggacactcctctgattaggcgtgtcccggtatcgaacacgtgtagtgtctgacac-gacacttataattacatttaattatgtgatttt 26830608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 242
Target Start/End: Original strand, 34712323 - 34712424
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtca-gacaccgacacatagaattacactgaattatgtgattt 239  Q
    |||||||||||| ||||| ||   |||||  ||||||| |||| ||||||||||| || || ||||| |||||||| ||||||||| |||||||| ||||    
T  34712323 ctatgaagcacggacactccttgaattagacgtgtcccagtgtaggacacgtgtc-cgacacgacactgacacatataattacactaaattatgttattt 34712421  T
Q  240 tct 242  Q
    |||    
T  34712422 tct 34712424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 239
Target Start/End: Complemental strand, 13436516 - 13436479
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattt 239  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  13436516 gacaccaacacatataattacactgaattatgtgattt 13436479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 14332634 - 14332683
Alignment:
Q  193 gtcgcgtcagacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||| ||| |||||||| ||||| ||||||||| ||||||||||||||||    
T  14332634 gtcgtgtccgacaccgagacatataattacactaaattatgtgattttct 14332683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 242
Target Start/End: Original strand, 25098563 - 25098596
Alignment:
Q  209 acacatagaattacactgaattatgtgattttct 242  Q
    ||||||| ||||||||||||||||||||||||||    
T  25098563 acacatataattacactgaattatgtgattttct 25098596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 6427408 - 6427368
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||| ||||||| ||||||| ||||||||||||||||||    
T  6427408 gacaccaacacatataattacattgaattatgtgattttct 6427368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 9709878 - 9709838
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| |||||||  |||||||||||||||||    
T  9709878 gacaccgacacatataattacaacgaattatgtgattttct 9709838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 12443469 - 12443501
Alignment:
Q  210 cacatagaattacactgaattatgtgattttct 242  Q
    |||||| ||||||||||||||||||||||||||    
T  12443469 cacatacaattacactgaattatgtgattttct 12443501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 19324612 - 19324580
Alignment:
Q  210 cacatagaattacactgaattatgtgattttct 242  Q
    |||||| ||||||||||||||||||||||||||    
T  19324612 cacatataattacactgaattatgtgattttct 19324580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 22794018 - 22794117
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtc-gcgtcagacaccgacacatagaattacactgaattatgtgattt 239  Q
    |||||||||||| ||||| |||  ||||| |||||||||| |||||||| | ||| | ||| |||| |||||| || |||||||||| ||||||| ||||    
T  22794018 ctatgaagcacgtacactcctcgaattaggtgtgtcccggagtcggacatgcgtcagtgtcggaca-cgacacctataattacactgtattatgtcattt 22794116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 25272540 - 25272500
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    ||||||||||| || ||||||||| ||||||||||||||||    
T  25272540 gacaccgacacttataattacactaaattatgtgattttct 25272500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 212
Target Start/End: Original strand, 31694638 - 31694710
Alignment:
Q  140 cctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacac 212  Q
    ||||||||||||| ||||| ||||||||||  |||| ||||||||| | | |||| | ||| |||||||||||    
T  31694638 cctatgaagcacggacactcctcagattaggcgtgttccggtgtcgaatatgtgttgtgtccgacaccgacac 31694710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 38503378 - 38503338
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| |||||||||||| ||| |||||||||    
T  38503378 gacaccgacacatataattacactgaaatatatgattttct 38503338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 4e-25; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 598327 - 598225
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||| ||||||||| ||||||  ||||||||||||||||||||||||| ||| ||||||||||| || ||||||| | ||||| ||||||||    
T  598327 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacttacaattacatttaattacgtgatttt 598228  T
Q  241 ctt 243  Q
    |||    
T  598227 ctt 598225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 142 - 242
Target Start/End: Original strand, 32287404 - 32287504
Alignment:
Q  142 tatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttc 241  Q
    ||||||||||| ||||| ||| |||||| |||||||||||||||||||| ||||  ||| |||||||||||||| | || ||||||||||||||||||||    
T  32287404 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacttgtcatgtccgacaccgacacatatacttgcactgaattatgtgattttc 32287503  T
Q  242 t 242  Q
    |    
T  32287504 t 32287504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 242
Target Start/End: Complemental strand, 21880271 - 21880170
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||| ||||||||| ||||||  |||||| ||||||||||| |||||| ||| ||||||||||| |  |||||||||||||||||| |||||    
T  21880271 ctatgaagcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtaatttt 21880172  T
Q  241 ct 242  Q
    ||    
T  21880171 ct 21880170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 140 - 240
Target Start/End: Complemental strand, 15680929 - 15680829
Alignment:
Q  140 cctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattt 239  Q
    ||||||||||||| ||||| |||  |||||  ||||| ||||||||||||||||||| ||| ||||||||||| || ||||||||| |||||||||||||    
T  15680929 cctatgaagcacggacactcctcgaattagacgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactaaattatgtgattt 15680830  T
Q  240 t 240  Q
    |    
T  15680829 t 15680829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 242
Target Start/End: Complemental strand, 1401143 - 1401043
Alignment:
Q  140 cctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattt 239  Q
    ||||||||||| | ||||| |||||||||| ||||||||| |||||||||  ||||| ||| |||||||| || || |||||||||||||||||||| ||    
T  1401143 cctatgaagcatggacactcctcagattaggtgtgtcccgatgtcggaca--tgtcgtgtcggacaccgatacttataattacactgaattatgtgagtt 1401046  T
Q  240 tct 242  Q
    |||    
T  1401045 tct 1401043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 242
Target Start/End: Complemental strand, 5835372 - 5835265
Alignment:
Q  135 gtttacctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgt 234  Q
    ||||| |||| |||||  |||||||||| |||||   |||||||||| || ||||| ||||  ||| |||||||||||||| ||||||||||||||||||    
T  5835372 gtttaactataaagcaaaaacacttctcggattaagcgtgtcccggtatcagacacatgtcatgtctgacaccgacacatataattacactgaattatgt 5835273  T
Q  235 gattttct 242  Q
     |||||||    
T  5835272 tattttct 5835265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 240
Target Start/End: Original strand, 5409769 - 5409875
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtc-----agacaccgacacatagaattacactgaattatg 233  Q
    |||||||||||||| ||||| ||| ||||||  ||||||||||||||||||||||||| |||      ||||||||||| |  |||| ||||||||||||    
T  5409769 acctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttgtaattgcactgaattatg 5409868  T
Q  234 tgatttt 240  Q
    |||||||    
T  5409869 tgatttt 5409875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 20549909 - 20549809
Alignment:
Q  142 tatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttc 241  Q
    |||||||||||  |||| ||| ||||||  ||||| |  ||||||||| |||| | ||| |||||||||||||| ||||||||||||||| |||||||||    
T  20549909 tatgaagcacgggcactcctcggattaggcgtgtctcattgtcggacatgtgttgtgtccgacaccgacacatataattacactgaattacgtgattttc 20549810  T
Q  242 t 242  Q
    |    
T  20549809 t 20549809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 191 - 242
Target Start/End: Complemental strand, 9483003 - 9482952
Alignment:
Q  191 gtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||| |||||||||||||| |||||||||||||| |||||||||||    
T  9483003 gtgtcgcgtccgacaccgacacatataattacactgaattgtgtgattttct 9482952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 21864927 - 21864828
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||  ||||| |||  |||||  ||||||||||||||||||||||||| ||| |||| |||||| |  ||||||||| |||||| |||||||    
T  21864927 ctatgaagcacagacactcctcgaattagacgtgtcccggtgtcggacacgtgtcgtgtccgacagcgacacttgtaattacactaaattatatgatttt 21864828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 243
Target Start/End: Original strand, 27093376 - 27093455
Alignment:
Q  164 gattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttctt 243  Q
    |||||| |||||||  ||||||||||| ||||| |||  |||||||| |||| ||||||||| |||||||||||||||||    
T  27093376 gattaggtgtgtcctagtgtcggacacatgtcgtgtctaacaccgacgcatataattacactaaattatgtgattttctt 27093455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 243
Target Start/End: Complemental strand, 27184925 - 27184846
Alignment:
Q  164 gattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttctt 243  Q
    |||||| |||||||  ||||||||||| ||||| |||  |||||||| |||| ||||||||| |||||||||||||||||    
T  27184925 gattaggtgtgtcctagtgtcggacacatgtcgtgtctaacaccgacgcatataattacactaaattatgtgattttctt 27184846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 32308249 - 32308179
Alignment:
Q  142 tatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacac 212  Q
    ||||||||| ||||||| ||| ||||||||||||| |||||||||||| |||||| |||  ||||||||||    
T  32308249 tatgaagcatgaacactcctcggattagctgtgtctcggtgtcggacatgtgtcgtgtccaacaccgacac 32308179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 242
Target Start/End: Original strand, 18212973 - 18213074
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||  ||||| ||| ||| ||  ||||||| ||||| || | | |||| ||| |||||||||||||| ||||||||| ||||||||||||||    
T  18212973 ctatgaagcacagacactcctcggataaggcgtgtccccgtgtcagaaaggggtcgtgtccgacaccgacacatataattacactaaattatgtgatttt 18213072  T
Q  241 ct 242  Q
    ||    
T  18213073 ct 18213074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 32093954 - 32094059
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtccc-ggtgtcggacacgtgtcgcgtc-----agacaccgacacatagaattacactgaattatgt 234  Q
    |||||||||||||||||| ||| ||||||  ||||||| |||||||||||||||||| |||      ||||||||||  |  ||||||||||||||||||    
T  32093954 ctatgaagcacgaacactcctcggattaggcgtgtccccggtgtcggacacgtgtcgtgtccgacacgacaccgacatttgtaattacactgaattatgt 32094053  T
Q  235 gatttt 240  Q
    ||||||    
T  32094054 gatttt 32094059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 236
Target Start/End: Complemental strand, 33994333 - 33994236
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtga 236  Q
    ||||||||| |||||||||| ||  ||||||  ||||| |||||| ||||| |||||| ||| ||||||||||| |  |||| |||||||||||||||    
T  33994333 acctatgaaacacgaacactccttggattaggcgtgtctcggtgttggacatgtgtcgtgtctgacaccgacacttgtaattgcactgaattatgtga 33994236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 22484143 - 22484043
Alignment:
Q  142 tatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttc 241  Q
    ||||||||||| ||||||||| ||| ||   |||| || ||||||||| |||||  ||| |||||||||||||| ||||| |||||||||||  ||||||    
T  22484143 tatgaagcacggacacttctcggatcagacatgtctcgatgtcggacatgtgtcatgtctgacaccgacacatataattatactgaattatgcaattttc 22484044  T
Q  242 t 242  Q
    |    
T  22484043 t 22484043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 22602711 - 22602751
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  22602711 gacaccgacacatataattacactgaattatgtgattttct 22602751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 242
Target Start/End: Original strand, 7133212 - 7133319
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtc-gcgtcagacaccgacaca-----tagaattacactgaattatgt 234  Q
    |||||||||||| || || |||||||||| |||||||| |||||||||||| ||| | ||| ||||||||||||     ||  |||||||||||||||||    
T  7133212 ctatgaagcacggacgctcctcagattaggtgtgtcccagtgtcggacacgcgtcggtgtccgacaccgacacaccacctatgattacactgaattatgt 7133311  T
Q  235 gattttct 242  Q
     |||||||    
T  7133312 cattttct 7133319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 212
Target Start/End: Complemental strand, 24339772 - 24339701
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacac 212  Q
    ||||||||||||  |||| ||| ||||||  |||||||||||||||| |||||||| ||| |||||||||||    
T  24339772 ctatgaagcacgggcactcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacac 24339701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 42720830 - 42720929
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    ||||||||||| ||||||| ||  |||||  |||| ||||||| | |||| ||| | ||||||||| |||||||| ||||||| | ||||||||||||||    
T  42720830 ctatgaagcacaaacacttatcgaattagacgtgttccggtgttgtacacatgttgtgtcagacactgacacatataattacatttaattatgtgatttt 42720929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 240
Target Start/End: Complemental strand, 9778626 - 9778520
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtc-----agacaccgacacatagaattacactgaattatg 233  Q
    |||||||||||||| ||||| ||  ||||||  ||||||||||||||||||||||| | |||      ||||||||||| |  ||||| |||||||||||    
T  9778626 acctatgaagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacacgacaccgacacttgtaattatactgaattatg 9778527  T
Q  234 tgatttt 240  Q
    |||||||    
T  9778526 tgatttt 9778520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 242
Target Start/End: Complemental strand, 39138532 - 39138462
Alignment:
Q  172 gtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttct 242  Q
    ||||||| ||||  |||| || ||| ||| |||||||||| ||| ||||||||||||||||||||||||||    
T  39138532 gtgtccccgtgttagacatgtatcgtgtccgacaccgacatatataattacactgaattatgtgattttct 39138462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 239
Target Start/End: Complemental strand, 640171 - 640134
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattt 239  Q
    |||||||||||||| |||||||||||||||||||||||    
T  640171 gacaccgacacatataattacactgaattatgtgattt 640134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 243
Target Start/End: Original strand, 27732189 - 27732281
Alignment:
Q  146 aagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttctt 243  Q
    ||||||| |||||| ||  ||||| ||||||| |||||||||||  ||||| ||     ||||||||||| |||||||||||||||||| ||||||||    
T  27732189 aagcacggacacttttcgaattaggtgtgtcctggtgtcggacatatgtcgtgt-----accgacacatataattacactgaattatgtaattttctt 27732281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 43027404 - 43027469
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacac 206  Q
    |||||||||||| |||||  || ||||||  ||||||||||||||||||||||||| ||| |||||    
T  43027404 ctatgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacac 43027469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 243
Target Start/End: Complemental strand, 12278931 - 12278852
Alignment:
Q  164 gattagctgtgtcccggtgtcggacacgtg-tcgcgtcagacaccgacacatagaattacactgaattatgtgattttctt 243  Q
    |||||| |||||||||||||| |||||| | | | ||| |||| ||||||||| |||||||||||||||||| ||||||||    
T  12278931 gattaggtgtgtcccggtgtcagacacgcgttggtgtccgaca-cgacacatataattacactgaattatgtcattttctt 12278852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 24146878 - 24146834
Alignment:
Q  198 gtcagacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||||||| ||||| | ||||||||||||||||||    
T  24146878 gtcagacaccgacacatataattatattgaattatgtgattttct 24146834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 203 - 242
Target Start/End: Complemental strand, 17851488 - 17851449
Alignment:
Q  203 acaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||| |||||||| ||||||||||||||||||||||||||    
T  17851488 acacagacacatataattacactgaattatgtgattttct 17851449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 17852119 - 17852065
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtc 195  Q
    |||||||||||| ||||| |||  ||||| |||||| ||||||||||||||||||    
T  17852119 ctatgaagcacggacactcctcgaattaggtgtgtctcggtgtcggacacgtgtc 17852065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 242
Target Start/End: Complemental strand, 22868094 - 22868060
Alignment:
Q  208 gacacatagaattacactgaattatgtgattttct 242  Q
    |||||||| ||||||||||||||||||||||||||    
T  22868094 gacacatataattacactgaattatgtgattttct 22868060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 240
Target Start/End: Complemental strand, 15902879 - 15902842
Alignment:
Q  203 acaccgacacatagaattacactgaattatgtgatttt 240  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  15902879 acaccgacacatataattacactaaattatgtgatttt 15902842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 19206109 - 19206068
Alignment:
Q  201 agacaccgacacatagaattacactgaattatgtgattttct 242  Q
    ||||||||||||||| ||||| | ||||||||||||||||||    
T  19206109 agacaccgacacatataattataatgaattatgtgattttct 19206068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 26033392 - 26033461
Alignment:
Q  143 atgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacac 212  Q
    ||||| |||| ||||| ||| |||||| |||||| |||| |||||||||||||  ||| |||||||||||    
T  26033392 atgaaacacggacactcctcggattaggtgtgtcgcggtatcggacacgtgtcatgtctgacaccgacac 26033461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 26733381 - 26733324
Alignment:
Q  183 tcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    ||||||| | |||| ||| |||||||||||||  ||||| ||||||||||||||||||    
T  26733381 tcggacatgcgtcgtgtccgacaccgacacatttaattagactgaattatgtgatttt 26733324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 3721151 - 3721111
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| ||||| ||| ||||||||||||||||    
T  3721151 gacaccgacacatataattatactaaattatgtgattttct 3721111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 5548734 - 5548694
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    ||||| |||||||| |||||||||||||||| |||||||||    
T  5548734 gacactgacacatataattacactgaattatttgattttct 5548694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 7328692 - 7328732
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| ||||||||| |||||||| |||||||    
T  7328692 gacaccgacacatataattacactaaattatgttattttct 7328732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 240
Target Start/End: Complemental strand, 8234234 - 8234166
Alignment:
Q  172 gtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    ||||| |||||||||||| |||||| ||| ||||||| ||| |  || ||||||||||||||| |||||    
T  8234234 gtgtctcggtgtcggacatgtgtcgtgtccgacaccggcacttgtaactacactgaattatgttatttt 8234166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 16341554 - 16341514
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    ||||||| |||||| ||||||||| ||||||||||||||||    
T  16341554 gacaccggcacatataattacacttaattatgtgattttct 16341514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 17307951 - 17307911
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||| ||||||| |||||||||||||||||| |||||||    
T  17307951 gacaccaacacatataattacactgaattatgttattttct 17307911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 19992059 - 19992019
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    ||||||||||| || |||||||||||| |||||||||||||    
T  19992059 gacaccgacacttataattacactgaaatatgtgattttct 19992019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 243
Target Start/End: Original strand, 23849460 - 23849500
Alignment:
Q  203 acaccgacacatagaattacactgaattatgtgattttctt 243  Q
    ||||||||||||| ||||| ||||||||||||| |||||||    
T  23849460 acaccgacacatataattatactgaattatgtgtttttctt 23849500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 229
Target Start/End: Complemental strand, 24105797 - 24105709
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaat 229  Q
    ||||||||||| |||||| ||| | ||||  ||||||||||||||||||| ||| | | | ||| ||||||| |  |||||||||||||    
T  24105797 ctatgaagcacaaacactcctcgggttaggcgtgtcccggtgtcggacacatgttgtgcccgactccgacacttgtaattacactgaat 24105709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 139 - 240
Target Start/End: Complemental strand, 43565002 - 43564901
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatt 238  Q
    |||||||||||||| ||||||||| ||||||  ||||||||| ||||||||| ||||| ||| ||||||||||| || ||||||||| ||||||||||||    
T  43565002 acctatgaagcacggacacttctcggattaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttataattacactaaattatgtgatt 43564903  T
Q  239 tt 240  Q
    ||    
T  43564902 tt 43564901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 21190998 - 21191095
Alignment:
Q  143 atgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||| ||||| ||| ||||||  ||||||||| ||||||||||||| | ||| ||||||||||| |  ||||||||||||||||||||||||    
T  21190998 atgaagcacggacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 21191095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 21576685 - 21576784
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||| ||||| ||| ||||||  ||||||| ||||| ||||||||||| ||| |||| |||||| |  ||||||||||||||||||||||||    
T  21576685 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacatcgacacttgtaattacactgaattatgtgatttt 21576784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 242
Target Start/End: Original strand, 30502330 - 30502429
Alignment:
Q  143 atgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| | ||  ||||||   |||||| |||||||||| |||||| ||| |||||||||||||| ||||||||||||||| ||||||||||    
T  30502330 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttct 30502429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 242
Target Start/End: Original strand, 30542673 - 30542772
Alignment:
Q  143 atgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| | ||  ||||||   |||||| |||||||||| |||||| ||| |||||||||||||| ||||||||||||||| ||||||||||    
T  30542673 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttct 30542772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 242
Target Start/End: Complemental strand, 14873642 - 14873535
Alignment:
Q  140 cctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtc-----agacaccgacacatagaattacactgaattatgt 234  Q
    ||||||||||||| ||||| ||| ||||||  |||||||||||| |||||||||| |||||      |||||||||||||| ||||||||| ||||||||    
T  14873642 cctatgaagcacggacactcctcggattaggcgtgtcccggtgttggacacgtgttgcgtccgacatgacaccgacacatataattacactaaattatgt 14873543  T
Q  235 gattttct 242  Q
    | ||||||    
T  14873542 gcttttct 14873535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 42893479 - 42893380
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||| | ||||| |||| |||||  |||||| |||||||||||||||| | ||| ||||||||||| |  |||||||||| |||||||||||||    
T  42893479 ctatgaagcatggacactcctcatattaggcgtgtcctggtgtcggacacgtgttgtgtctgacaccgacacttgtaattacactggattatgtgatttt 42893380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 174 - 242
Target Start/End: Original strand, 18421814 - 18421882
Alignment:
Q  174 gtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttct 242  Q
    ||||||||| |||||| |||||| ||| ||| |||||||||| |||||||||| |||||||||||||||    
T  18421814 gtcccggtgccggacatgtgtcgtgtccgacgccgacacatataattacactggattatgtgattttct 18421882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 242
Target Start/End: Complemental strand, 26312875 - 26312787
Alignment:
Q  154 acacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttct 242  Q
    ||||| ||| |||||| ||||||| |||||| ||||||| ||| ||| |||||||| ||||| |||||||||||||||  |||||||||    
T  26312875 acactcctcggattaggtgtgtcctggtgtcagacacgtatcgtgtccgacaccgatacatataattacactgaattaattgattttct 26312787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 139 - 242
Target Start/End: Original strand, 28588612 - 28588715
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatt 238  Q
    |||||||||||| | |||||  || |||||   |||||| |||||| || | |||||| ||| ||||||||||| || ||||||||||||||||||||||    
T  28588612 acctatgaagcatggacactcttcggattaagcgtgtcctggtgtcagatatgtgtcgtgtccgacaccgacacctataattacactgaattatgtgatt 28588711  T
Q  239 ttct 242  Q
    ||||    
T  28588712 ttct 28588715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 238
Target Start/End: Original strand, 30098982 - 30099075
Alignment:
Q  145 gaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatt 238  Q
    |||||||||||||| ||  ||| ||  ||||||| ||||| |||||||||||  || |||||||||||||| |||||||| |||||||| ||||    
T  30098982 gaagcacgaacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtatccgacaccgacacatataattacacagaattatgcgatt 30099075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 242
Target Start/End: Complemental strand, 27932355 - 27932253
Alignment:
Q  140 cctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattt 239  Q
    |||||||||||| |||||| |||  |||||  |||||| |||||| ||||||||||| ||| |||||| | |  |  |||||||||||||||||| ||||    
T  27932355 cctatgaagcacaaacactcctcgaattaggcgtgtcctggtgtccgacacgtgtcgtgtccgacaccaagatttgtaattacactgaattatgtaattt 27932256  T
Q  240 tct 242  Q
    |||    
T  27932255 tct 27932253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 242
Target Start/End: Original strand, 21194063 - 21194164
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||| ||||||| ||||| ||| ||||||  ||| ||||||||| |||| |||||| |||  ||||| | || || ||||||||||||| ||||||||||    
T  21194063 ctataaagcacggacactcctcggattaggcgtgccccggtgtctgacatgtgtcgtgtccaacaccaatacctataattacactgaatgatgtgatttt 21194162  T
Q  241 ct 242  Q
    ||    
T  21194163 ct 21194164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 242
Target Start/End: Original strand, 23012380 - 23012449
Alignment:
Q  173 tgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||| |||| |||||| |||  ||||||||||||| ||||||| | |||||| |||||||||    
T  23012380 tgtcccggtgtcagacatgtgtcgtgtccaacaccgacacatataattacattaaattatatgattttct 23012449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 39758327 - 39758290
Alignment:
Q  205 accgacacatagaattacactgaattatgtgattttct 242  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  39758327 accgacacatataattacactgaattatgtgattttct 39758290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 3966561 - 3966521
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| |||||||||||||| |||||||||||    
T  3966561 gacaccgacacatataattacactgaattgtgtgattttct 3966521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 6471890 - 6471930
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||| ||||||| ||||||||||||||||||||||||||    
T  6471890 gacacccacacatataattacactgaattatgtgattttct 6471930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 212
Target Start/End: Complemental strand, 21542129 - 21542089
Alignment:
Q  172 gtgtcccggtgtcggacacgtgtcgcgtcagacaccgacac 212  Q
    ||||||||||||||||||||||||| ||| |||||||||||    
T  21542129 gtgtcccggtgtcggacacgtgtcgtgtccgacaccgacac 21542089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 41091258 - 41091298
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||| ||||||||| ||||||||||||||||||||||||||    
T  41091258 gacatcgacacatataattacactgaattatgtgattttct 41091298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 242
Target Start/End: Complemental strand, 42029826 - 42029770
Alignment:
Q  186 gacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||| |||||| ||| |||||||| ||||| ||||||| ||||||||||||||||||    
T  42029826 gacatgtgtcgtgtccgacaccgatacatataattacattgaattatgtgattttct 42029770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 212
Target Start/End: Complemental strand, 7677835 - 7677764
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacac 212  Q
    |||||||||||  || || ||| ||||||  |||||||||||||||||| ||| || |||||||||||||||    
T  7677835 ctatgaagcaccgactctcctcggattaggcgtgtcccggtgtcggacatgtgacgtgtcagacaccgacac 7677764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 242
Target Start/End: Original strand, 32630673 - 32630776
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatt 238  Q
    ||||||||||||   ||||| |||  ||||| |||||| |  ||||||||||||||||  || ||||| |||||||| ||||||| |||||||| | |||    
T  32630673 acctatgaagcatagacactcctcgaattaggtgtgtctcaatgtcggacacgtgtcgtatccgacactgacacatataattacattgaattatataatt 32630772  T
Q  239 ttct 242  Q
    ||||    
T  32630773 ttct 32630776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 212
Target Start/End: Original strand, 32766872 - 32766943
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacac 212  Q
    |||||||||||| ||||| ||||||||||  || ||| ||||||||||||||||||  |  |||||||||||    
T  32766872 ctatgaagcacggacactcctcagattagacgtatcctggtgtcggacacgtgtcgttttcgacaccgacac 32766943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 215
Target Start/End: Original strand, 39268541 - 39268612
Alignment:
Q  144 tgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacata 215  Q
    ||||||||| ||||| ||| ||||||  ||||||| ||||||||||| ||||| |||  |||||||||||||    
T  39268541 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacatgtcgtgtccaacaccgacacata 39268612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 212
Target Start/End: Complemental strand, 39698671 - 39698600
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacac 212  Q
    |||||||||||| ||||| ||| ||||||  ||||| |||||||||| || ||||| ||| |||||||||||    
T  39698671 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatacatgtcgtgtccgacaccgacac 39698600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 242
Target Start/End: Original strand, 24272994 - 24273071
Alignment:
Q  162 cagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttct 242  Q
    ||||||||| |||||| ||||||||| | |||||| ||   |||||   ||||| ||||||||||||||||||||||||||    
T  24272994 cagattagccgtgtccgggtgtcggatatgtgtcgtgtaccacacc---acatataattacactgaattatgtgattttct 24273071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 24389220 - 24389143
Alignment:
Q  162 cagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttct 242  Q
    ||||||||| |||||| ||||||||| | |||||| ||   |||||   ||||| ||||||||||||||||||||||||||    
T  24389220 cagattagccgtgtccgggtgtcggatatgtgtcgtgtaccacacc---acatataattacactgaattatgtgattttct 24389143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 189
Target Start/End: Original strand, 38464311 - 38464361
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggaca 189  Q
    |||||||||||||  ||||| ||| |||||| |||||||||||||||||||    
T  38464311 acctatgaagcacagacactcctcggattaggtgtgtcccggtgtcggaca 38464361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 15884057 - 15884008
Alignment:
Q  191 gtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||| ||| ||||||||||| |  ||||||||||||||||||||||||    
T  15884057 gtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 15884008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 242
Target Start/End: Complemental strand, 17123166 - 17123066
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||| ||||| ||| ||||||  |||||||| ||||||||| || ||| |||  ||||||||| ||| ||||  |||  |||||||||||||    
T  17123166 ctatgaagcacggacactcctcggattaggcgtgtcccg-tgtcggacatgtttcgtgtccaacaccgacatatataattgtacttgattatgtgatttt 17123068  T
Q  241 ct 242  Q
    ||    
T  17123067 ct 17123066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 17925173 - 17925214
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttctt 243  Q
    ||||||||||||||  |||||| |||||||||||||||||||    
T  17925173 gacaccgacacatattattacattgaattatgtgattttctt 17925214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 30098456 - 30098391
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacac 206  Q
    |||||||||||| ||| | ||| |||||| ||||||| |||||| ||||||||||| ||| |||||    
T  30098456 ctatgaagcacggacattcctcggattaggtgtgtcctggtgtctgacacgtgtcgtgtccgacac 30098391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 32426869 - 32426910
Alignment:
Q  201 agacaccgacacatagaattacactgaattatgtgattttct 242  Q
    ||||||||||||| | ||||||| ||||||||||||||||||    
T  32426869 agacaccgacacaaataattacaatgaattatgtgattttct 32426910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 6401556 - 6401516
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| |||||||||| ||| |||||||||||    
T  6401556 gacaccgacacatataattacactgtattttgtgattttct 6401516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 242
Target Start/End: Original strand, 7997108 - 7997207
Alignment:
Q  143 atgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtc-gcgtcagacaccgacacatagaattacactgaattatgtgattttc 241  Q
    ||||||||| ||||||||||  ||||| ||||||| | ||||||||||| ||| | ||| |||| |||||| || |||||||||| ||||| | ||||||    
T  7997108 atgaagcacaaacacttctcgaattaggtgtgtcctgatgtcggacacgcgtcagtgtccgaca-cgacacttataattacactgtattatatcattttc 7997206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 16203796 - 16203836
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| ||||||||| ||||||| ||||||||    
T  16203796 gacaccgacacatataattacactaaattatgagattttct 16203836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 19820328 - 19820376
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggaca 189  Q
    |||||||||||| ||||| ||| ||||||  ||||||||||||||||||    
T  19820328 ctatgaagcacggacactcctctgattaggcgtgtcccggtgtcggaca 19820376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 212
Target Start/End: Complemental strand, 21522849 - 21522809
Alignment:
Q  172 gtgtcccggtgtcggacacgtgtcgcgtcagacaccgacac 212  Q
    ||||||||||| ||||||||||||| ||| |||||||||||    
T  21522849 gtgtcccggtgccggacacgtgtcgtgtccgacaccgacac 21522809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 212
Target Start/End: Complemental strand, 21533415 - 21533375
Alignment:
Q  172 gtgtcccggtgtcggacacgtgtcgcgtcagacaccgacac 212  Q
    ||||||||||| ||||||||||||| ||| |||||||||||    
T  21533415 gtgtcccggtgccggacacgtgtcgtgtccgacaccgacac 21533375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 21814319 - 21814279
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| |||||||||| ||| |||||||||||    
T  21814319 gacaccgacacatataattacactgcattttgtgattttct 21814279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 36838601 - 36838561
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| ||||||||| |||||||| |||||||    
T  36838601 gacaccgacacatataattacactaaattatgtaattttct 36838561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 240
Target Start/End: Original strand, 403 - 501
Alignment:
Q  142 tatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    ||||||||||| ||||| ||| |||||| ||||||||||||||||||||| |||| ||| ||||||||||| |  |||||||||||||| |||||||||    
T  403 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacttgtaattacactgaattttgtgatttt 501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 4e-22; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 2438661 - 2438758
Alignment:
Q  143 atgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||| ||||| ||| ||||||  |||||||||||||||||| |||||| ||| ||||||||||| |  ||||||||||||||||||||||||    
T  2438661 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 2438758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 18840953 - 18841052
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||| ||||| ||| |||||| ||||||||||||||||||| |||||| ||| ||||||||||| |  ||||||||| |||||||| |||||    
T  18840953 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacacttgtaattacacttaattatgtaatttt 18841052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 28596587 - 28596492
Alignment:
Q  142 tatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgat 237  Q
    ||||||||||| ||||| ||| ||||||  ||||||  ||||||||||||||||| ||| ||||||||||| || ||||||||||| |||||||||    
T  28596587 tatgaagcacggacactcctcggattaggagtgtccgagtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgacttatgtgat 28596492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 30404790 - 30404889
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    ||||||||||| ||| |||||||||||||   ||||| ||||||||||| |||||| ||| ||| ||||||| |  ||||||||||||||||||||||||    
T  30404790 ctatgaagcacaaacgcttctcagattaggcatgtcctggtgtcggacatgtgtcgtgtccgacgccgacacttgtaattacactgaattatgtgatttt 30404889  T

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Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 240
Target Start/End: Complemental strand, 15972993 - 15972893
Alignment:
Q  140 cctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattt 239  Q
    ||||||||||||| ||| |  || |||||| |||||||||| ||||||||||||||| ||| ||||||||||| |  |||||||||||||| ||| ||||    
T  15972993 cctatgaagcacggacattcttcggattaggtgtgtcccggcgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattgtgtaattt 15972894  T
Q  240 t 240  Q
    |    
T  15972893 t 15972893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 239
Target Start/End: Complemental strand, 5367280 - 5367213
Alignment:
Q  172 gtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattt 239  Q
    ||||||||| |||||| | |||||| ||| |||||||||||||| |||||||||||||||||||||||    
T  5367280 gtgtcccggagtcggatatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgattt 5367213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 37559096 - 37558997
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||| ||||| ||| |||||   |||| |||||||||||||||||||  ||| ||||||||||| |  ||||||| ||||||||||||||||    
T  37559096 ctatgaagcacggacactcctcggattaagcgtgtaccggtgtcggacacgtgtcaagtccgacaccgacacttgtaattacattgaattatgtgatttt 37558997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 20242706 - 20242768
Alignment:
Q  180 gtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttct 242  Q
    ||||| ||||||||| | ||| |||||||||||||| ||||||||||||||||||||||||||    
T  20242706 gtgtcagacacgtgttgtgtccgacaccgacacatataattacactgaattatgtgattttct 20242768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 38117099 - 38117198
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||| ||||  ||| ||||||  ||||||||||||||||||||||| | ||| |||||| |||| |  |||||||| ||| |||||||||||    
T  38117099 ctatgaagcacggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccaacacttgtaattacaccgaagtatgtgatttt 38117198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 234
Target Start/End: Original strand, 34993921 - 34994015
Alignment:
Q  140 cctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgt 234  Q
    ||||||||||||||||||| ||   |||||  ||||||| ||||||||||| ||||| ||  ||||| |||||||| ||||||| ||||||||||    
T  34993921 cctatgaagcacgaacactccttgaattaggcgtgtcccagtgtcggacacatgtcgtgttcgacactgacacatataattacattgaattatgt 34994015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 242
Target Start/End: Original strand, 37411215 - 37411285
Alignment:
Q  172 gtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttct 242  Q
    ||||||| |||||||||||| |||| ||  |||| ||||||||| ||| ||||||||||||||||||||||    
T  37411215 gtgtcccagtgtcggacacgcgtcgtgttcgacatcgacacatataatcacactgaattatgtgattttct 37411285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 242
Target Start/End: Complemental strand, 24009414 - 24009314
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||| ||||| ||  ||| ||  ||||||| ||||| ||||||||||| ||| |||||||||||||| | |||||||| ||| |||||||||    
T  24009414 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacata-atttacactgcattttgtgatttt 24009316  T
Q  241 ct 242  Q
    ||    
T  24009315 ct 24009314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 37419875 - 37419802
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacac 212  Q
    |||||||||||||| ||||| ||| ||||||  ||||||||||||||||||||  ||| ||| |||||||||||    
T  37419875 acctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgcatcgtgtccgacaccgacac 37419802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 240
Target Start/End: Complemental strand, 5040822 - 5040754
Alignment:
Q  172 gtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    ||||||||| ||||||||| ||||| ||| ||||||||||| |  ||||||| ||||||||||||||||    
T  5040822 gtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttgtaattacattgaattatgtgatttt 5040754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 240
Target Start/End: Complemental strand, 31808173 - 31808097
Alignment:
Q  164 gattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||| ||||||| ||||||| ||| |||||| ||   |||| |||||||| ||||||||||||||||||||||||    
T  31808173 gattaggtgtgtccaggtgtcgaacatgtgtcgtgttcaacactgacacatataattacactgaattatgtgatttt 31808097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 212
Target Start/End: Complemental strand, 35056998 - 35056927
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacac 212  Q
    |||||||||||| ||||| ||||||||||  ||||  | ||||||||||||||||| ||| |||||||||||    
T  35056998 ctatgaagcacggacactcctcagattaggcgtgtttccgtgtcggacacgtgtcgtgtccgacaccgacac 35056927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 26769641 - 26769571
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgaca 211  Q
    |||||||||||| ||||| ||| ||||||  ||||||| ||||||||||||||||| ||| || |||||||    
T  26769641 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgaca 26769571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 150 - 236
Target Start/End: Original strand, 29176442 - 29176528
Alignment:
Q  150 acgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtga 236  Q
    ||||||||||||  |||||| |||||| | |||||||||| ||| || |||  ||||| |||| || ||||||||||||||||||||    
T  29176442 acgaacacttcttggattaggtgtgtctcagtgtcggacatgtgccgtgtccaacaccaacacttataattacactgaattatgtga 29176528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 18889591 - 18889632
Alignment:
Q  201 agacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||||  |||||||||||||||||||||||||    
T  18889591 agacaccgacacatatgattacactgaattatgtgattttct 18889632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 42511322 - 42511375
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgt 194  Q
    |||||||||||| ||||| ||| ||||||| ||||||| |||||||||||||||    
T  42511322 ctatgaagcacggacactcctcggattagccgtgtccctgtgtcggacacgtgt 42511375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 21782744 - 21782816
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacaca 213  Q
    |||||||||||| ||||| | ||||||||  |||||||||||| |||||||||||| | | |||||| |||||    
T  21782744 ctatgaagcacggacactccacagattagacgtgtcccggtgttggacacgtgtcgtgcctgacaccaacaca 21782816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 34784983 - 34785023
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| ||||||||| ||||||||||||||||    
T  34784983 gacaccgacacatataattacactaaattatgtgattttct 34785023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 38355888 - 38355928
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| ||| ||||||||||||||||||||||    
T  38355888 gacaccgacacatataatcacactgaattatgtgattttct 38355928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 239
Target Start/End: Complemental strand, 41843534 - 41843462
Alignment:
Q  172 gtgtcccggtgtcggacacgtgtcgcgtcag-----acaccgacacatagaattacactgaattatgtgattt 239  Q
    ||||||| ||||||||||||||||||||| |     ||||||||||||| ||||| || ||||||||||||||    
T  41843534 gtgtccccgtgtcggacacgtgtcgcgtccgacacaacaccgacacatataattataccgaattatgtgattt 41843462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 44860378 - 44860338
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| ||||||||||||||||| ||||||||    
T  44860378 gacaccgacacatataattacactgaattatgcgattttct 44860338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 203 - 242
Target Start/End: Complemental strand, 39279732 - 39279693
Alignment:
Q  203 acaccgacacatagaattacactgaattatgtgattttct 242  Q
    ||||||||||||| |||||||||||||||| |||||||||    
T  39279732 acaccgacacatataattacactgaattatttgattttct 39279693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 5891715 - 5891785
Alignment:
Q  142 tatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacac 212  Q
    |||||| ||||||||||||| | |||||  ||||| || |||| ||||||||||| |||| ||||||||||    
T  5891715 tatgaaacacgaacacttcttaaattagacgtgtctcgatgtctgacacgtgtcgtgtcaaacaccgacac 5891785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 207
Target Start/End: Original strand, 11223793 - 11223858
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacacc 207  Q
    |||||||||||| ||||| ||||||||||  ||||||||||||| |||| |||||| ||| ||||||    
T  11223793 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcagaca-gtgtcgtgtccgacacc 11223858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 240
Target Start/End: Complemental strand, 12224337 - 12224243
Alignment:
Q  146 aagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||| |||||| ||  ||||||  ||||||| ||||||||||||| ||| ||| ||||||||||| |  ||||||| || |||||| ||||||    
T  12224337 aagcacaaacactccttggattaggcgtgtcccagtgtcggacacgtatcgtgtccgacaccgacacttgtaattacattggattatgggatttt 12224243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 19980794 - 19980740
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtc 195  Q
    |||||||||| ||||||||||| |||||| |||||| || ||||||||| |||||    
T  19980794 ctatgaagcatgaacacttctcggattaggtgtgtctcgatgtcggacatgtgtc 19980740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 23718082 - 23718044
Alignment:
Q  204 caccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||| |||||||||||||||||||| |||||    
T  23718082 caccgacacatataattacactgaattatgtgactttct 23718044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 24105754 - 24105716
Alignment:
Q  204 caccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||| |||||||||||||||||||| |||||    
T  24105754 caccgacacatataattacactgaattatgtgactttct 24105716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 240
Target Start/End: Original strand, 34691806 - 34691844
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||||| |||||||||||||||| |||||||    
T  34691806 gacaccgacacatataattacactgaattatatgatttt 34691844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 240
Target Start/End: Original strand, 34714218 - 34714256
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||||| |||||||||||||||| |||||||    
T  34714218 gacaccgacacatataattacactgaattatatgatttt 34714256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 242
Target Start/End: Complemental strand, 21616813 - 21616780
Alignment:
Q  209 acacatagaattacactgaattatgtgattttct 242  Q
    ||||||| ||||||||||||||||||||||||||    
T  21616813 acacatataattacactgaattatgtgattttct 21616780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 24975255 - 24975304
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacac 190  Q
    |||||||||||| ||||| |||||||||| | |||||| |||||||||||    
T  24975255 ctatgaagcacggacactcctcagattagatttgtcccagtgtcggacac 24975304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 240
Target Start/End: Complemental strand, 28678034 - 28677929
Alignment:
Q  140 cctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgac-----acatagaattacactgaattatgt 234  Q
    |||||||||||   ||||| ||| | | ||| ||||||| ||||||||||| ||||| ||  |||||||||     ||||| ||||||||||||||||||    
T  28678034 cctatgaagcatagacactcctccggtcagccgtgtccctgtgtcggacacttgtcgtgtttgacaccgacaccgaacatataattacactgaattatgt 28677935  T
Q  235 gatttt 240  Q
    ||||||    
T  28677934 gatttt 28677929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 18276579 - 18276539
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||| | ||||||||||||||| ||||||||||    
T  18276579 gacaccgacacacataattacactgaattaagtgattttct 18276539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 20922929 - 20922969
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    ||||| |||||||| ||||||||| ||||||||||||||||    
T  20922929 gacacagacacatataattacactaaattatgtgattttct 20922969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 28524479 - 28524447
Alignment:
Q  207 cgacacatagaattacactgaattatgtgattt 239  Q
    ||||||||| |||||||||||||||||||||||    
T  28524479 cgacacatataattacactgaattatgtgattt 28524447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 35056926 - 35056886
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| |||||||||||||||| || ||||||    
T  35056926 gacaccgacacatataattacactgaattatatggttttct 35056886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 230
Target Start/End: Complemental strand, 37497242 - 37497150
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtc-gcgtcagacaccgacacatagaattacactgaatt 230  Q
    |||||||||||||| ||||||||  |||||||  |||||||||| || ||| ||||| | ||| |||||||||| |||  |||||| ||||||    
T  37497242 acctatgaagcacggacacttctgggattagccatgtcccggtgccgaacatgtgtcggtgtctgacaccgacagatattattacattgaatt 37497150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 6e-21; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 143 - 242
Target Start/End: Complemental strand, 3025668 - 3025569
Alignment:
Q  143 atgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||| ||||| ||| ||||||| ||||| | ||||| ||||||||||| ||| ||||| ||||| || ||||||||||||||||||||||||||    
T  3025668 atgaagcacggacactcctcggattagccgtgtcacagtgtcagacacgtgtcgtgtccgacactgacacctataattacactgaattatgtgattttct 3025569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 172 - 242
Target Start/End: Original strand, 20679366 - 20679436
Alignment:
Q  172 gtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttct 242  Q
    ||||||||||||||||||||||| ||||| ||||||||||| || |||||||||||| |||||||||||||    
T  20679366 gtgtcccggtgtcggacacgtgttgcgtctgacaccgacacttataattacactgaactatgtgattttct 20679436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 173 - 242
Target Start/End: Original strand, 926760 - 926829
Alignment:
Q  173 tgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||||||||||||||||| ||||||||||| || ||||||||||||  ||| ||||||||    
T  926760 tgtcccggtgtcggacacgtgtcgcgtccgacaccgacacttataattacactgaacaatgagattttct 926829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 242
Target Start/End: Complemental strand, 14134818 - 14134717
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    ||||||| |||| ||||| |||  |||||  |||||| |||| ||||||||||||| ||  |||||||||| ||| ||||||||||||||||||||||||    
T  14134818 ctatgaaacacggacactcctcgaattaggcgtgtcctggtgacggacacgtgtcgtgtttgacaccgacatatataattacactgaattatgtgatttt 14134719  T
Q  241 ct 242  Q
    ||    
T  14134718 ct 14134717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 29510231 - 29510304
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacac 212  Q
    |||||||||||||| ||||| ||| |||||| ||||||||||||||||||||| |||| ||| |||||||||||    
T  29510231 acctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 29510304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 242
Target Start/End: Complemental strand, 40332312 - 40332209
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatt 238  Q
    |||| |||| |||| ||||| ||| ||||||  | |||||||||| |||||||||||| |||  |||||||||| |  ||||||||||||||||||||||    
T  40332312 acctgtgaaacacggacactcctcggattaggcgcgtcccggtgtgggacacgtgtcgtgtcccacaccgacacttgtaattacactgaattatgtgatt 40332213  T
Q  239 ttct 242  Q
    ||||    
T  40332212 ttct 40332209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 31580071 - 31580169
Alignment:
Q  145 gaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttctt 243  Q
    |||||| ||||||  ||| |||||| |||||  |||||||| ||| |||||||||| |||| |||||| || ||||||||| |||||||||||||||||    
T  31580071 gaagcatgaacacccctcggattaggtgtgtttcggtgtcgaacatgtgtcgcgtccgacatcgacacctataattacactcaattatgtgattttctt 31580169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 242
Target Start/End: Original strand, 33405347 - 33405425
Alignment:
Q  164 gattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttct 242  Q
    ||||||| |||||| |||||| |||| |||||| ||| |||||||||||||| ||||||||| ||||||||| ||||||    
T  33405347 gattagccgtgtccaggtgtcagacatgtgtcgtgtccgacaccgacacatataattacactaaattatgtgtttttct 33405425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 243
Target Start/End: Complemental strand, 38079112 - 38079016
Alignment:
Q  147 agcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttctt 243  Q
    |||||| |||||| ||||||||   ||| |||||||||||||| | |||| ||| |||| |||| |||| ||||||||||||| |||||||||||||    
T  38079112 agcacggacacttttcagattatacgtggcccggtgtcggacatgcgtcgtgtccgacatcgacgcatataattacactgaatcatgtgattttctt 38079016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 212
Target Start/End: Complemental strand, 22652106 - 22652035
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacac 212  Q
    |||||||||||| ||||| ||| ||||||  ||||||||||||||||||| ||||| ||| |||||||||||    
T  22652106 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgtccgacaccgacac 22652035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 36450694 - 36450793
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||  ||||| ||| ||||||  |||||| ||||||||||||| |||| ||| |||||| |||| |  |||||||||||||| |||||||||    
T  36450694 ctatgaagcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacctacacttgtaattacactgaattctgtgatttt 36450793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 4786339 - 4786380
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttctt 243  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  4786339 gacaccgacacatataattacactgaattatgtgattttctt 4786380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 5813713 - 5813640
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacac 212  Q
    ||||| |||||||| ||||| |||  |||||  ||||||||||||||||||||||||| ||| |||||||||||    
T  5813713 acctacgaagcacggacactcctccaattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacac 5813640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 240
Target Start/End: Complemental strand, 18407840 - 18407739
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatt 238  Q
    |||||||||||||| ||||| |||  |||||  ||||||  |||||||||| |||||| ||| | || |||||| |  ||||||||||||||||||||||    
T  18407840 acctatgaagcacggacactcctccaattaggcgtgtcctagtgtcggacatgtgtcgtgtccggcagcgacacttgtaattacactgaattatgtgatt 18407741  T
Q  239 tt 240  Q
    ||    
T  18407740 tt 18407739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 234
Target Start/End: Original strand, 24413499 - 24413592
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgt 234  Q
    |||||||||||| ||||||||| ||||||  |||||||| ||| |||||||  ||| ||| ||||| ||||| || |||||| |||||||||||    
T  24413499 ctatgaagcacggacacttctcggattagacgtgtcccgctgttggacacgcatcgtgtccgacactgacacttataattaccctgaattatgt 24413592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 26902176 - 26902216
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  26902176 gacaccgacacatataattacactgaattatgtgattttct 26902216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 240
Target Start/End: Complemental strand, 31557084 - 31557016
Alignment:
Q  172 gtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||| ||||||||||| |||||| ||| |||||||| || |  ||||||||||||||||||||||||    
T  31557084 gtgtcctggtgtcggacatgtgtcgtgtctgacaccgaaacttgtaattacactgaattatgtgatttt 31557016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 242
Target Start/End: Original strand, 37283755 - 37283851
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    ||||||||||||  |||| ||| ||||||  ||||||||||    ||||||||||| |||  |||||||||||||  |||||||||||||||||||||||    
T  37283755 ctatgaagcacgggcactcctcggattagacgtgtcccggta---gacacgtgtcgtgtcccacaccgacacata--attacactgaattatgtgatttt 37283849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 3951476 - 3951575
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||| | ||| ||  ||||||  |||| || ||||| ||||||||||| ||| |||||||||||||| || ||||||| ||| |||||||||    
T  3951476 ctatgaagcacggaaactccttggattaggcgtgttcccgtgtcagacacgtgtcgtgtctgacaccgacacatataagtacactgcattttgtgatttt 3951575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 202 - 245
Target Start/End: Complemental strand, 8847314 - 8847271
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttcttcg 245  Q
    |||||||||||||| ||||||||||||||||||||||| |||||    
T  8847314 gacaccgacacatataattacactgaattatgtgatttgcttcg 8847271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 212
Target Start/End: Original strand, 15816058 - 15816129
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacac 212  Q
    |||||||||||| ||||||||| ||||||  ||||||||||||||||  ||||||| ||| |||||| ||||    
T  15816058 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggattcgtgtcgtgtccgacaccaacac 15816129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 190
Target Start/End: Complemental strand, 27213646 - 27213595
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacac 190  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||||| |||||    
T  27213646 acctatgaagcacggacacttctcggattagccgtgtcccggtgtccgacac 27213595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 212
Target Start/End: Complemental strand, 29447574 - 29447503
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacac 212  Q
    |||||||||||| ||||| ||| ||||||   |||||||||||||||||| ||||| ||| |||||||||||    
T  29447574 ctatgaagcacggacactcctccgattagacctgtcccggtgtcggacacatgtcgtgtctgacaccgacac 29447503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 241
Target Start/End: Original strand, 43737752 - 43737851
Alignment:
Q  142 tatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttc 241  Q
    ||||||||||| ||||| ||  ||| ||  || |||| ||||| ||||| ||||| ||| |||||||||||||| |||||||||| ||| ||||||||||    
T  43737752 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacctgtcgtgtccgacaccgacacatataattacactgtattttgtgattttc 43737851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 223
Target Start/End: Original strand, 126295 - 126369
Alignment:
Q  149 cacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattaca 223  Q
    |||| ||||| ||| ||||||| |||||||||| | |||||||||||| ||| ||||| |||||||| |||||||    
T  126295 cacggacactcctcggattagccgtgtcccggtattggacacgtgtcgtgtccgacactgacacatataattaca 126369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 240
Target Start/End: Original strand, 11927087 - 11927125
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  11927087 gacaccgacacatataattacactgaattatgtgatttt 11927125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 243
Target Start/End: Complemental strand, 11803316 - 11803276
Alignment:
Q  203 acaccgacacatagaattacactgaattatgtgattttctt 243  Q
    ||||| ||||||| |||||||||||||||||||||||||||    
T  11803316 acaccaacacatataattacactgaattatgtgattttctt 11803276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 13844597 - 13844637
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| ||||||||| ||||||||||||||||    
T  13844597 gacaccgacacatataattacactcaattatgtgattttct 13844637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 240
Target Start/End: Complemental strand, 20873157 - 20873089
Alignment:
Q  172 gtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    ||||| |||| |||||||||| ||| ||| ||||||||||| |  ||||||||| ||||||||||||||    
T  20873157 gtgtctcggtatcggacacgtatcgtgtccgacaccgacacttgtaattacactaaattatgtgatttt 20873089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 22596070 - 22596014
Alignment:
Q  184 cggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    ||||||||||||||||| |||||| |||| |  |||||||||||||||||| |||||    
T  22596070 cggacacgtgtcgcgtccgacaccaacacttgtaattacactgaattatgttatttt 22596014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 34897143 - 34897103
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||| ||||||||| ||||||||||||||||||||||||||    
T  34897143 gacatcgacacatataattacactgaattatgtgattttct 34897103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 949203 - 949278
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacat 214  Q
    |||||||||||||||||| | ||||||||||  ||||| |||||||||| | ||||||  || | |||||||||||    
T  949203 acctatgaagcacgaacattcctcagattaggagtgtctcggtgtcggatatgtgtcgtatccggcaccgacacat 949278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 237
Target Start/End: Complemental strand, 8293931 - 8293848
Alignment:
Q  154 acacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgat 237  Q
    ||||| ||| |||||| ||||||| |||||| || | |||||  ||  |||||||||||||| ||||||||||||||| |||||    
T  8293931 acactcctcggattaggtgtgtccaggtgtcagatatgtgtcatgtttgacaccgacacatataattacactgaattacgtgat 8293848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 238
Target Start/End: Original strand, 9414857 - 9414912
Alignment:
Q  183 tcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatt 238  Q
    |||||||||||||| ||| |||||| |||| || |||| |||||||||||||||||    
T  9414857 tcggacacgtgtcgtgtctgacaccaacacttataattgcactgaattatgtgatt 9414912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 203 - 242
Target Start/End: Complemental strand, 18964234 - 18964195
Alignment:
Q  203 acaccgacacatagaattacactgaattatgtgattttct 242  Q
    ||||||||||||| ||||||| ||||||||||||||||||    
T  18964234 acaccgacacatataattacattgaattatgtgattttct 18964195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 206
Target Start/End: Complemental strand, 8343447 - 8343381
Alignment:
Q  140 cctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacac 206  Q
    ||||||||||||  |||||  || ||||||  ||||||||||||||||||||||||| ||| |||||    
T  8343447 cctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcggacac 8343381  T

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Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 240
Target Start/End: Complemental strand, 11944723 - 11944685
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  11944723 gacaccgacacatataattacactgagttatgtgatttt 11944685  T

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Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Original strand, 31236580 - 31236618
Alignment:
Q  204 caccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||| ||||||| ||||||||||||||||||    
T  31236580 caccgacacatataattacattgaattatgtgattttct 31236618  T

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Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 240
Target Start/End: Original strand, 4298829 - 4298925
Alignment:
Q  140 cctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattt 239  Q
    |||||||||||||| |||| ||||||||||  |||||||| ||||| |||||||||   || ||||||||||| |  ||||||| | |||||||||||||    
T  4298829 cctatgaagcacga-cactcctcagattaggcgtgtcccg-tgtcgaacacgtgtca--tctgacaccgacacttgtaattacattaaattatgtgattt 4298924  T

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Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 239
Target Start/End: Original strand, 28384995 - 28385032
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattt 239  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  28384995 gacaccgacacatataattacactgaattatgagattt 28385032  T

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Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 33382020 - 33382061
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttctt 243  Q
    |||||||||||||| |||||| ||||||||||| ||||||||    
T  33382020 gacaccgacacatataattactctgaattatgtcattttctt 33382061  T

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Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 40064081 - 40064032
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacac 190  Q
    ||||| |||||| ||||| ||| |||||| ||||||||||||||||||||    
T  40064081 ctatgtagcacggacactcctcggattagatgtgtcccggtgtcggacac 40064032  T

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Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 12606830 - 12606870
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| ||||||| |||||||| |||||||||    
T  12606830 gacaccgacacatataattacattgaattatatgattttct 12606870  T

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Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 22197669 - 22197725
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtc 195  Q
    |||||| ||||||| ||||| ||||||||||  |||  |||||||||||||||||||    
T  22197669 acctataaagcacggacactcctcagattaggcgtgatccggtgtcggacacgtgtc 22197725  T

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Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 27213601 - 27213565
Alignment:
Q  206 ccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  27213601 ccgacacatataattacagtgaattatgtgattttct 27213565  T

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Target: scaffold0050 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 144 - 240
Target Start/End: Complemental strand, 70394 - 70298
Alignment:
Q  144 tgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||||||  || ||||||   ||||| |||||||||||||||||| ||| ||||||||||| || |||||||||||||||||| |||||    
T  70394 tgaagcacgaacactcatcggattaggcatgtcctggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaattatgttatttt 70298  T

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Target: scaffold0053 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 8917 - 8818
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||| | ||| ||||||||||  ||||| ||||||||||||||||||| ||| ||||||||||| |  ||||||||| ||| || |||||||    
T  8917 ctatgaagcacggagactcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaataatatgatttt 8818  T

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Target: scaffold0003 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 212
Target Start/End: Complemental strand, 241724 - 241653
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacac 212  Q
    |||||||||||| ||||||||| ||||||  ||||||||||||||||||||||||| ||| |||||| ||||    
T  241724 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacac 241653  T

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Target: scaffold0003; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 236912 - 236964
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacg 191  Q
    |||||||||||||  ||||| |||||||||| |||||||||||||| ||||||    
T  236912 acctatgaagcacagacactcctcagattaggtgtgtcccggtgtcagacacg 236964  T

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Target: scaffold0793 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 4821 - 4922
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgt--cagacaccgacacatagaattacactgaattatgtgatt 238  Q
    |||||||||||| ||||| ||| ||||||  ||||||| |||||||||| |||||| ||   ||||||| |||| |  ||||||||||||||||||||||    
T  4821 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatgtgatt 4920  T
Q  239 tt 240  Q
    ||    
T  4921 tt 4922  T

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Target: scaffold0361 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 14646 - 14550
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||| ||||| ||  ||||||  ||||| ||||||||||||||||||| ||| |||||   ||| |  ||||||||||||||||||||||||    
T  14646 ctatgaagcacgtacactccttcgattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacac---cacttgtaattacactgaattatgtgatttt 14550  T

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Target: scaffold0019 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 71857 - 71784
Alignment:
Q  139 acctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacac 212  Q
    |||||||||||||  ||||| ||| ||||||  ||||||||||||||||||||||| | ||| |||||||||||    
T  71857 acctatgaagcaccgacactcctcggattagtcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacac 71784  T

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Target: scaffold0022 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 242
Target Start/End: Complemental strand, 90924 - 90861
Alignment:
Q  179 ggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||||| | ||| |||| ||||| ||| |||||||||||||||| |||||||||    
T  90924 ggtgtcggacacgtgttgtgtctgacatcgacatatataattacactgaattatatgattttct 90861  T

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Target: scaffold0020 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 242
Target Start/End: Original strand, 135263 - 135353
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgatttt 240  Q
    |||||||||||||||||  ||||||||||  |||||| |||||||||||||           ||||||||||||| |||||||| |||||||||||||||    
T  135263 ctatgaagcacgaacacgcctcagattaggcgtgtcctggtgtcggacacg-----------acaccgacacatataattacacagaattatgtgatttt 135351  T

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Target: scaffold0123 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 44529 - 44566
Alignment:
Q  205 accgacacatagaattacactgaattatgtgattttct 242  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  44529 accgacacatataattacactgaattatgtgattttct 44566  T

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Target: scaffold0123; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 212
Target Start/End: Original strand, 44454 - 44525
Alignment:
Q  141 ctatgaagcacgaacacttctcagattagctgtgtcccggtgtcggacacgtgtcgcgtcagacaccgacac 212  Q
    |||||||||||  ||||||||||||||| |  |||||| ||||||||||||||| | |||  ||||||||||    
T  44454 ctatgaagcacagacacttctcagattaaccatgtcccagtgtcggacacgtgttgtgtccaacaccgacac 44525  T

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Target: scaffold0083 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 234
Target Start/End: Original strand, 45502 - 45563
Alignment:
Q  173 tgtcccggtgtcggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgt 234  Q
    |||| ||||||| ||||||||||| ||| ||||||||||| |  ||||||||||||||||||    
T  45502 tgtcgcggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgt 45563  T

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Target: scaffold0036 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 9748 - 9788
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| ||||||||||||||| ||||||||||    
T  9748 gacaccgacacatataattacactgaattaagtgattttct 9788  T

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Target: scaffold0279 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 243
Target Start/End: Complemental strand, 17845 - 17787
Alignment:
Q  185 ggacacgtgtcgcgtcagacaccgacacatagaattacactgaattatgtgattttctt 243  Q
    |||||| ||||| ||| |||||||||||||| |||||||| || || ||||||||||||    
T  17845 ggacacatgtcgtgtctgacaccgacacatacaattacaccgagttgtgtgattttctt 17787  T

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Target: scaffold0171 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 240
Target Start/End: Complemental strand, 23478 - 23440
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgatttt 240  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  23478 gacaccgacacttataattacactgaattatgtgatttt 23440  T

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Target: scaffold0044 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 53236 - 53198
Alignment:
Q  204 caccgacacatagaattacactgaattatgtgattttct 242  Q
    ||||||||| || ||||||||||||||||||||||||||    
T  53236 caccgacacttataattacactgaattatgtgattttct 53198  T

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Target: scaffold0044; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 212
Target Start/End: Complemental strand, 53279 - 53239
Alignment:
Q  172 gtgtcccggtgtcggacacgtgtcgcgtcagacaccgacac 212  Q
    ||||||||||||||||||||||||  ||| |||||||||||    
T  53279 gtgtcccggtgtcggacacgtgtcatgtccgacaccgacac 53239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 5997 - 6037
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    |||||||||||||| |||||||||| ||| |||||||||||    
T  5997 gacaccgacacatataattacactgcattttgtgattttct 6037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 25769 - 25809
Alignment:
Q  202 gacaccgacacatagaattacactgaattatgtgattttct 242  Q
    ||||||||||| || ||||||||| ||||||||||||||||    
T  25769 gacaccgacacttataattacactaaattatgtgattttct 25809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 243
Target Start/End: Complemental strand, 28907 - 28867
Alignment:
Q  203 acaccgacacatagaattacactgaattatgtgattttctt 243  Q
    ||||||||||||| ||||||| ||||||||| |||||||||    
T  28907 acaccgacacatataattacattgaattatgcgattttctt 28867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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