View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0033_low_16 (Length: 290)

Name: NF0033_low_16
Description: NF0033
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0033_low_16
NF0033_low_16
[»] chr4 (44 HSPs)
chr4 (41-287)||(22234644-22234890)
chr4 (16-112)||(23292926-23293022)
chr4 (10-114)||(35161053-35161157)
chr4 (11-112)||(8423658-8423759)
chr4 (16-112)||(35157925-35158021)
chr4 (16-112)||(12895214-12895310)
chr4 (28-112)||(34306744-34306828)
chr4 (19-112)||(2361915-2362008)
chr4 (57-114)||(19482743-19482800)
chr4 (16-81)||(49431049-49431114)
chr4 (16-112)||(36509032-36509128)
chr4 (16-112)||(40179576-40179672)
chr4 (16-119)||(28964181-28964284)
chr4 (16-81)||(29205467-29205532)
chr4 (16-69)||(54580006-54580059)
chr4 (47-111)||(3947702-3947766)
chr4 (16-108)||(12797282-12797374)
chr4 (16-112)||(715545-715643)
chr4 (16-112)||(752871-752969)
chr4 (11-94)||(9996858-9996941)
chr4 (16-51)||(22234891-22234926)
chr4 (41-116)||(30982803-30982878)
chr4 (61-107)||(3712458-3712504)
chr4 (41-114)||(53381528-53381602)
chr4 (57-110)||(19312410-19312463)
chr4 (42-115)||(24613627-24613700)
chr4 (47-111)||(14465006-14465070)
chr4 (17-112)||(16886633-16886726)
chr4 (41-112)||(24343560-24343632)
chr4 (63-114)||(18513173-18513224)
chr4 (57-112)||(29205532-29205587)
chr4 (65-112)||(37203324-37203371)
chr4 (16-110)||(4157172-4157266)
chr4 (11-73)||(8402721-8402783)
chr4 (41-114)||(10133756-10133830)
chr4 (64-114)||(11596295-11596345)
chr4 (13-51)||(15029785-15029823)
chr4 (20-114)||(16073421-16073515)
chr4 (57-110)||(28000672-28000725)
chr4 (11-51)||(5775359-5775399)
chr4 (19-75)||(21945529-21945585)
chr4 (11-47)||(40613468-40613504)
chr4 (69-113)||(40784029-40784073)
chr4 (16-112)||(42640552-42640643)
[»] chr6 (41 HSPs)
chr6 (11-112)||(7377997-7378098)
chr6 (16-112)||(28152121-28152217)
chr6 (16-112)||(34595157-34595253)
chr6 (19-116)||(28715321-28715418)
chr6 (10-81)||(9658896-9658967)
chr6 (18-109)||(32978842-32978933)
chr6 (11-76)||(7265569-7265634)
chr6 (57-114)||(8776906-8776963)
chr6 (41-114)||(10339052-10339125)
chr6 (11-109)||(9025448-9025535)
chr6 (16-95)||(12627534-12627613)
chr6 (16-111)||(17841530-17841625)
chr6 (56-111)||(31959213-31959268)
chr6 (16-75)||(33001266-33001325)
chr6 (17-115)||(4877967-4878064)
chr6 (19-112)||(7977770-7977863)
chr6 (41-114)||(8365446-8365519)
chr6 (41-114)||(10294166-10294239)
chr6 (11-112)||(13360313-13360413)
chr6 (16-113)||(16833331-16833428)
chr6 (16-116)||(7740664-7740764)
chr6 (11-114)||(17327588-17327696)
chr6 (11-51)||(19044482-19044522)
chr6 (11-51)||(21924936-21924976)
chr6 (16-112)||(24645504-24645600)
chr6 (16-51)||(7027265-7027300)
chr6 (41-112)||(9107299-9107370)
chr6 (41-112)||(16766756-16766827)
chr6 (11-62)||(19040370-19040421)
chr6 (19-113)||(6898220-6898314)
chr6 (63-109)||(8389411-8389457)
chr6 (62-112)||(9027236-9027286)
chr6 (11-68)||(31579211-31579266)
chr6 (10-112)||(32511606-32511708)
chr6 (57-114)||(12236723-12236780)
chr6 (42-110)||(5000557-5000625)
chr6 (11-51)||(9617452-9617492)
chr6 (11-51)||(9629401-9629441)
chr6 (11-51)||(26562707-26562747)
chr6 (23-67)||(30851630-30851674)
chr6 (64-112)||(34894968-34895016)
[»] chr3 (39 HSPs)
chr3 (16-115)||(40993272-40993371)
chr3 (16-112)||(18426972-18427068)
chr3 (16-117)||(55401098-55401199)
chr3 (41-115)||(41961576-41961650)
chr3 (19-112)||(20503491-20503584)
chr3 (11-112)||(35222956-35223057)
chr3 (11-111)||(8789489-8789591)
chr3 (16-110)||(25775532-25775624)
chr3 (11-112)||(11251996-11252095)
chr3 (16-81)||(10954975-10955040)
chr3 (41-114)||(14209172-14209245)
chr3 (40-112)||(25074841-25074914)
chr3 (11-108)||(25093520-25093617)
chr3 (47-112)||(27505305-27505370)
chr3 (61-114)||(40052380-40052433)
chr3 (57-114)||(49651714-49651771)
chr3 (17-81)||(3631708-3631772)
chr3 (47-111)||(14216957-14217021)
chr3 (47-111)||(14223086-14223150)
chr3 (13-112)||(23657759-23657858)
chr3 (11-82)||(45451571-45451642)
chr3 (58-112)||(17276792-17276846)
chr3 (11-72)||(2941576-2941637)
chr3 (41-110)||(4987222-4987291)
chr3 (11-112)||(13845465-13845566)
chr3 (16-110)||(28918024-28918120)
chr3 (16-110)||(29508467-29508567)
chr3 (17-68)||(3865698-3865749)
chr3 (16-51)||(7928473-7928508)
chr3 (41-112)||(25064966-25065037)
chr3 (58-112)||(8101892-8101946)
chr3 (62-112)||(11610578-11610628)
chr3 (58-112)||(34185052-34185106)
chr3 (16-113)||(7171524-7171621)
chr3 (57-114)||(52369851-52369908)
chr3 (72-112)||(8903514-8903554)
chr3 (41-81)||(14832158-14832198)
chr3 (47-107)||(16192667-16192727)
chr3 (67-111)||(25211604-25211648)
[»] chr1 (49 HSPs)
chr1 (16-110)||(29163323-29163417)
chr1 (16-114)||(5898204-5898302)
chr1 (16-113)||(1815280-1815377)
chr1 (16-111)||(12918968-12919063)
chr1 (23-113)||(37598861-37598951)
chr1 (16-114)||(51410048-51410146)
chr1 (11-115)||(2896058-2896162)
chr1 (11-98)||(40181889-40181976)
chr1 (16-111)||(40258874-40258969)
chr1 (41-114)||(9828103-9828176)
chr1 (19-112)||(18190048-18190141)
chr1 (16-112)||(18337352-18337448)
chr1 (16-112)||(22515827-22515923)
chr1 (16-110)||(1486646-1486745)
chr1 (55-110)||(17778615-17778670)
chr1 (11-73)||(36878479-36878541)
chr1 (16-110)||(42359391-42359485)
chr1 (41-114)||(40917808-40917881)
chr1 (57-113)||(6427539-6427595)
chr1 (40-112)||(32461393-32461465)
chr1 (16-112)||(38078601-38078697)
chr1 (16-112)||(46348323-46348419)
chr1 (45-112)||(18556385-18556452)
chr1 (61-107)||(1209821-1209867)
chr1 (16-112)||(52903272-52903365)
chr1 (23-115)||(9690210-9690303)
chr1 (11-111)||(10233271-10233374)
chr1 (11-113)||(20157283-20157391)
chr1 (11-51)||(30749858-30749898)
chr1 (11-51)||(30771309-30771349)
chr1 (11-51)||(34371731-34371771)
chr1 (11-51)||(44482248-44482288)
chr1 (11-50)||(1864882-1864921)
chr1 (16-51)||(9828067-9828102)
chr1 (16-63)||(17705576-17705622)
chr1 (62-113)||(46940747-46940798)
chr1 (41-112)||(47989556-47989627)
chr1 (11-113)||(7918153-7918252)
chr1 (16-50)||(13997906-13997940)
chr1 (61-107)||(23219608-23219654)
chr1 (11-81)||(43492465-43492535)
chr1 (10-99)||(2784573-2784662)
chr1 (59-112)||(5944360-5944413)
chr1 (59-112)||(19562556-19562608)
chr1 (11-111)||(10577676-10577776)
chr1 (19-51)||(23636050-23636082)
chr1 (11-51)||(25361904-25361944)
chr1 (41-113)||(31694638-31694710)
chr1 (11-51)||(39953147-39953187)
[»] chr7 (30 HSPs)
chr7 (10-112)||(598225-598327)
chr7 (11-111)||(32287404-32287504)
chr7 (16-113)||(15680832-15680929)
chr7 (19-112)||(21880178-21880271)
chr7 (17-113)||(1401049-1401143)
chr7 (47-114)||(5409769-5409836)
chr7 (19-118)||(5835273-5835372)
chr7 (41-111)||(32308179-32308249)
chr7 (17-114)||(33994236-33994333)
chr7 (11-111)||(20549809-20549909)
chr7 (16-112)||(21864831-21864927)
chr7 (11-62)||(9482952-9483003)
chr7 (20-111)||(22484052-22484143)
chr7 (41-112)||(24339701-24339772)
chr7 (10-89)||(27093376-27093455)
chr7 (10-89)||(27184846-27184925)
chr7 (47-112)||(32093954-32094020)
chr7 (40-112)||(7133212-7133285)
chr7 (11-112)||(18212973-18213074)
chr7 (47-112)||(43027404-43027469)
chr7 (11-51)||(22602711-22602751)
chr7 (16-112)||(42720830-42720926)
chr7 (16-51)||(640136-640171)
chr7 (59-114)||(9778571-9778626)
chr7 (58-112)||(17852065-17852119)
chr7 (11-81)||(39138462-39138532)
chr7 (41-110)||(26033392-26033461)
chr7 (10-89)||(12278852-12278931)
chr7 (24-112)||(24105709-24105797)
chr7 (11-55)||(24146834-24146878)
[»] chr5 (29 HSPs)
chr5 (16-114)||(43564904-43565002)
chr5 (16-110)||(21190998-21191092)
chr5 (16-112)||(21576685-21576781)
chr5 (11-110)||(30502330-30502429)
chr5 (11-110)||(30542673-30542772)
chr5 (18-113)||(14873542-14873642)
chr5 (16-112)||(42893383-42893479)
chr5 (22-99)||(26312798-26312875)
chr5 (20-108)||(30098982-30099070)
chr5 (11-114)||(28588612-28588715)
chr5 (41-81)||(21542089-21542129)
chr5 (41-112)||(7677764-7677835)
chr5 (41-112)||(32766872-32766943)
chr5 (38-109)||(39268541-39268612)
chr5 (41-112)||(39698600-39698671)
chr5 (19-113)||(27932261-27932355)
chr5 (64-114)||(38464311-38464361)
chr5 (11-112)||(21194063-21194164)
chr5 (11-80)||(23012380-23012449)
chr5 (47-112)||(30098391-30098456)
chr5 (21-114)||(32630673-32630766)
chr5 (11-48)||(39758290-39758327)
chr5 (11-51)||(3966521-3966561)
chr5 (11-51)||(6471890-6471930)
chr5 (64-112)||(19820328-19820376)
chr5 (41-81)||(21522809-21522849)
chr5 (41-81)||(21533375-21533415)
chr5 (11-51)||(41091258-41091298)
chr5 (11-67)||(42029770-42029826)
[»] scaffold0652 (1 HSPs)
scaffold0652 (16-111)||(403-498)
[»] chr2 (32 HSPs)
chr2 (16-110)||(2438661-2438755)
chr2 (19-112)||(18840953-18841046)
chr2 (16-111)||(28596492-28596587)
chr2 (16-112)||(30404790-30404886)
chr2 (23-113)||(15972903-15972993)
chr2 (16-81)||(5367215-5367280)
chr2 (16-112)||(37559000-37559096)
chr2 (11-73)||(20242706-20242768)
chr2 (19-113)||(34993921-34994015)
chr2 (41-114)||(37419802-37419875)
chr2 (16-112)||(38117099-38117195)
chr2 (41-112)||(35056927-35056998)
chr2 (42-112)||(26769571-26769641)
chr2 (17-103)||(29176442-29176528)
chr2 (11-81)||(37411215-37411285)
chr2 (16-81)||(5040757-5040822)
chr2 (11-112)||(24009314-24009414)
chr2 (16-89)||(31808100-31808173)
chr2 (59-112)||(42511322-42511375)
chr2 (40-112)||(21782744-21782816)
chr2 (41-111)||(5891715-5891785)
chr2 (46-112)||(11223793-11223858)
chr2 (58-112)||(19980740-19980794)
chr2 (16-81)||(41843464-41843534)
chr2 (11-52)||(18889591-18889632)
chr2 (63-112)||(24975255-24975304)
chr2 (17-49)||(23718050-23718082)
chr2 (17-49)||(24105722-24105754)
chr2 (11-51)||(34784983-34785023)
chr2 (23-114)||(37497150-37497242)
chr2 (11-51)||(38355888-38355928)
chr2 (11-51)||(44860338-44860378)
[»] chr8 (37 HSPs)
chr8 (11-110)||(3025569-3025668)
chr8 (11-81)||(20679366-20679436)
chr8 (41-114)||(29510231-29510304)
chr8 (25-80)||(926760-926815)
chr8 (11-112)||(14134717-14134818)
chr8 (41-112)||(22652035-22652106)
chr8 (18-89)||(33405347-33405418)
chr8 (11-114)||(40332209-40332312)
chr8 (10-108)||(31580071-31580169)
chr8 (41-114)||(5813640-5813713)
chr8 (19-112)||(24413499-24413592)
chr8 (16-112)||(36450694-36450790)
chr8 (10-106)||(38079016-38079112)
chr8 (41-112)||(15816058-15816129)
chr8 (63-114)||(27213595-27213646)
chr8 (41-112)||(29447503-29447574)
chr8 (30-104)||(126295-126369)
chr8 (16-114)||(18407742-18407840)
chr8 (10-51)||(4786339-4786380)
chr8 (16-81)||(31557019-31557084)
chr8 (16-112)||(3951476-3951572)
chr8 (11-51)||(26902176-26902216)
chr8 (11-112)||(37283755-37283851)
chr8 (39-114)||(949203-949278)
chr8 (16-99)||(8293848-8293931)
chr8 (16-51)||(8847279-8847314)
chr8 (16-51)||(11927087-11927122)
chr8 (16-111)||(43737752-43737847)
chr8 (47-113)||(8343381-8343447)
chr8 (16-70)||(9414857-9414911)
chr8 (19-69)||(22596020-22596070)
chr8 (16-81)||(20873092-20873157)
chr8 (63-112)||(40064032-40064081)
chr8 (10-50)||(11803276-11803316)
chr8 (11-51)||(13844597-13844637)
chr8 (58-114)||(22197669-22197725)
chr8 (11-51)||(34897103-34897143)
[»] scaffold0050 (1 HSPs)
scaffold0050 (19-109)||(70304-70394)
[»] scaffold0003 (2 HSPs)
scaffold0003 (41-112)||(241653-241724)
scaffold0003 (62-114)||(236912-236964)
[»] scaffold0053 (1 HSPs)
scaffold0053 (28-112)||(8833-8917)
[»] scaffold0019 (1 HSPs)
scaffold0019 (41-114)||(71784-71857)
[»] scaffold0793 (1 HSPs)
scaffold0793 (16-112)||(4821-4919)
[»] scaffold0361 (1 HSPs)
scaffold0361 (16-112)||(14553-14646)
[»] scaffold0083 (1 HSPs)
scaffold0083 (19-80)||(45502-45563)
[»] scaffold0123 (2 HSPs)
scaffold0123 (41-112)||(44454-44525)
scaffold0123 (11-48)||(44529-44566)
[»] scaffold0022 (1 HSPs)
scaffold0022 (11-74)||(90861-90924)
[»] scaffold0020 (1 HSPs)
scaffold0020 (11-112)||(135263-135353)
[»] scaffold0044 (1 HSPs)
scaffold0044 (41-81)||(53239-53279)
[»] scaffold0036 (1 HSPs)
scaffold0036 (11-51)||(9748-9788)


Alignment Details
Target: chr4 (Bit Score: 223; Significance: 1e-123; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 41 - 287
Target Start/End: Complemental strand, 22234890 - 22234644
Alignment:
Q  41 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggtaaacactaatagttaattcaaagagt 140  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22234890 gtgtcggtgtctgacacgacacgtgtccgacaccaggacacagctaatccgagaagtgttcgtgcttcataggtaaacactaatagttaattcaaagagt 22234791  T
Q  141 ataattgagtacttacaagtagttggacattgacaaccctgcaaaagatctgaggctgaagatcatagtttggtatctccaattgcttaaaaggagaaaa 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22234790 ataattgagtacttacaagtagttggacattgacaaccctgcaaaagatctgaggctgaagatcatagtttggtatctccaattgcttaaaaggagaaaa 22234691  T
Q  241 agaagcaaattgtaccaagtgacattgtggaaaatataccacaacat 287  Q
    ||||||||||||| ||||||||| |||||||||||| ||||||||||    
T  22234690 agaagcaaattgttccaagtgaccttgtggaaaatacaccacaacat 22234644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 23293022 - 23292926
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||||||||||||| |||||  | ||||||||||| ||| |||||||||||||||||||||||||  |||||| ||| ||||| ||||||||||||    
T  23293022 atcacataattcagtataattacaagtgtcggtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 23292926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 35161053 - 35161157
Alignment:
Q  10 aagaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttca 109  Q
    ||||| ||||||||||||||||||||| || || || | ||| ||| |||||||||||||||||||| ||||| |||||| || |||||| |||||||||    
T  35161053 aagaaaatcacataattcagtgtaattataagtatcagagtcggacacgacacgtgtccgacaccggaacacacctaatccgaaaagtgtccgtgcttca 35161152  T
Q  110 taggt 114  Q
    |||||    
T  35161153 taggt 35161157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 8423759 - 8423658
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 110  Q
    |||| ||||||||||||||||||||| ||  |||||||||| ||| |||||  ||||||||||||||||||  |||||| ||||||||| ||||| ||||    
T  8423759 agaaaatcacataattcagtgtaattataaatgtcggtgtcggacacgacagctgtccgacaccgggacacgcctaatcggagaagtgtccgtgcgtcat 8423660  T
Q  111 ag 112  Q
    ||    
T  8423659 ag 8423658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 35158021 - 35157925
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||||||||| ||||||||| || ||||||||||||||| |||||| ||||| ||||||| ||||   ||||| ||||||||| ||||||||||||    
T  35158021 atcacataatttagtgtaattataagtgtcggtgtctgacacgacacatgtccaacaccggaacacgcttaatccgagaagtgtccgtgcttcatag 35157925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 12895310 - 12895214
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||||||||||  |||||||| || ||||||||||| ||| ||||| || ||||||| ||||||||  |||||| ||| ||||||||||||||||||    
T  12895310 atcacataattttgtgtaattataagtgtcggtgtcggacacgacatgtatccgacatcgggacacgcctaatccgaggagtgttcgtgcttcatag 12895214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 34306828 - 34306744
Alignment:
Q  28 agtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||||||||  | ||||||||||| ||| ||||||||||||||||||| |||||  |||||||||| | ||||||||||||||||    
T  34306828 agtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggaatgttcgtgcttcatag 34306744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 2362008 - 2361915
Alignment:
Q  19 acataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||||||| |||||||||  | ||||||||||| ||| |||| |||||| ||||||| |||||| |||||||||  ||||| ||||||||||||    
T  2362008 acataatttagtgtaattaaaagtgtcggtgtcggacacgactcgtgtctgacaccgagacacacctaatctgacgagtgtccgtgcttcatag 2361915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 19482743 - 19482800
Alignment:
Q  57 cgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 114  Q
    ||||||||||||||||| |||||||| |||||| ||| ||||||||||||||||||||    
T  19482743 cgacacgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcataggt 19482800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 49431049 - 49431114
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacac 81  Q
    |||||||||||||||||||||  | ||||||||||| ||| |||||||||||| ||||||||||||    
T  49431049 atcacataattcagtgtaattaaaagtgtcggtgtcggacacgacacgtgtccaacaccgggacac 49431114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 36509128 - 36509032
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||||||||  ||||||||| |||||||||| ||| ||||||||||||||| || ||| ||||||   ||||| ||||||| ||| ||||||||||    
T  36509128 atcacataatcaagtgtaattatatgtgtcggcgtcggacgcgacacgtgtctgataccaggacacgtttaatccgagaagtattcatgcttcatag 36509032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 40179672 - 40179576
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||||||||||||||||||| |||| ||||||||| ||| |||||| ||| |||||||  |||||  |||||| ||||| | ||||||||| ||||    
T  40179672 atcacataattcagtgtaattatatgcgtcggtgtcggacacgacacatgttcgacaccatgacacgcctaatccgagaattattcgtgcttgatag 40179576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 28964284 - 28964181
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggta 115  Q
    |||||||||||||||||||||  | ||||| ||||| ||| |||||| | |||||||| |||||||  |||||| ||| ||||| | |||||||||| ||    
T  28964284 atcacataattcagtgtaattacaagtgtctgtgtcggacacgacacatatccgacactgggacacgcctaatccgaggagtgtccatgcttcatagtta 28964185  T
Q  116 aaca 119  Q
    ||||    
T  28964184 aaca 28964181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 29205467 - 29205532
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacac 81  Q
    |||||||||||||||||||||  | ||||||||||  ||| |||||| ||||||||||||||||||    
T  29205467 atcacataattcagtgtaattacaagtgtcggtgttggacacgacacatgtccgacaccgggacac 29205532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 54580059 - 54580006
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccg 69  Q
    ||||||||||||||||||||| || ||||||||||| ||| |||||||||||||    
T  54580059 atcacataattcagtgtaattataagtgtcggtgtcggacacgacacgtgtccg 54580006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 3947766 - 3947702
Alignment:
Q  47 gtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcata 111  Q
    ||||| ||| |||||||||||||||||| ||||||| |||||| ||| ||||| |||||||||||    
T  3947766 gtgtcggacacgacacgtgtccgacaccaggacacacctaatccgaggagtgtccgtgcttcata 3947702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 108
Target Start/End: Complemental strand, 12797374 - 12797282
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttc 108  Q
    |||||||||||||||||||||  | ||||||||||| ||| ||| || |||| ||||||||||||   |||||| ||| | ||||||||||||    
T  12797374 atcacataattcagtgtaattacaagtgtcggtgtcggacacgatacatgtctgacaccgggacaagtctaatccgaggaatgttcgtgcttc 12797282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 715643 - 715545
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctg--acgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||||||||||||||||||||  | |||| |||||||   || |||||| |||||||||| |||||||  |||||| ||| ||||| ||||||||||||    
T  715643 atcacataattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 715545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 752969 - 752871
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctg--acgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||||||||||||||||||||  | |||| |||||||   || |||||| |||||||||| |||||||  |||||| ||| ||||| ||||||||||||    
T  752969 atcacataattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 752871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 9996858 - 9996941
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgaga 94  Q
    |||| ||||||||||||||| ||||| ||||| |||||||| |||   ||||||||||||||| || ||||| |||||| ||||    
T  9996858 agaaaatcacataattcagtataattatatgtctcggtgtcagacataacacgtgtccgacactggaacacacctaatcggaga 9996941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 22234926 - 22234891
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtc 51  Q
    ||||||||||||||||||||||||||||||||||||    
T  22234926 atcacataattcagtgtaattctatgtgtcggtgtc 22234891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 116
Target Start/End: Complemental strand, 30982878 - 30982803
Alignment:
Q  41 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggtaa 116  Q
    ||||||||||| ||| |||||||||||||||||||||||||  ||||||  |  ||||| ||||||||||| ||||    
T  30982878 gtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccaaagagtgtccgtgcttcatatgtaa 30982803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 107
Target Start/End: Complemental strand, 3712504 - 3712458
Alignment:
Q  61 acgtgtccgacaccgggacacagctaatctgagaagtgttcgtgctt 107  Q
    ||||||||||||||||||||| ||||||||||| ||||| |||||||    
T  3712504 acgtgtccgacaccgggacacggctaatctgaggagtgtccgtgctt 3712458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 53381602 - 53381528
Alignment:
Q  41 gtgtcggtgtctgacgc-gacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 114  Q
    ||||||||||| ||| | ||| ||| ||||||||||||||||| |||||| ||| ||||| ||||||||||||||    
T  53381602 gtgtcggtgtcggacactgacgcgtatccgacaccgggacacacctaatccgaggagtgtccgtgcttcataggt 53381528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 110
Target Start/End: Original strand, 19312410 - 19312463
Alignment:
Q  57 cgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 110  Q
    ||||||||||||||||||| |||||  |||||||||||||||| |||| |||||    
T  19312410 cgacacgtgtccgacaccgagacacgtctaatctgagaagtgtccgtgtttcat 19312463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 115
Target Start/End: Complemental strand, 24613700 - 24613627
Alignment:
Q  42 tgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggta 115  Q
    |||||||||| ||| ||||||||||| |||||| ||||||  ||||||  || ||||| |||||||||||||||    
T  24613700 tgtcggtgtcagacacgacacgtgtctgacaccaggacacgtctaatcctaggagtgtccgtgcttcataggta 24613627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 14465070 - 14465006
Alignment:
Q  47 gtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcata 111  Q
    ||||| ||| |||||||||| |||||| |||||||  |||||||||| ||||| |||||||||||    
T  14465070 gtgtcagacacgacacgtgttcgacactgggacacgtctaatctgaggagtgtccgtgcttcata 14465006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 16886633 - 16886726
Alignment:
Q  17 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||||||||||||| |||   |||||| |||| | ||| | ||| |||||||||||||| |||| |||||||| |||||||| ||||||| ||||    
T  16886633 tcacataattcagtgaaata--atgtgttggtgacagacactacatgtgtccgacaccggaacacggctaatctcagaagtgtccgtgcttgatag 16886726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 112
Target Start/End: Original strand, 24343560 - 24343632
Alignment:
Q  41 gtgtcggtgtctgacgc-gacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||||||||| ||| | ||| ||||||||||||||||||||  ||| |||||| ||||| ||||||||||||    
T  24343560 gtgtcggtgtccgacaccgacgcgtgtccgacaccgggacacgcctattctgaggagtgtccgtgcttcatag 24343632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 114
Target Start/End: Complemental strand, 18513224 - 18513173
Alignment:
Q  63 gtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 114  Q
    |||||||||||| ||||||  |||||||||| ||||| ||||||||||||||    
T  18513224 gtgtccgacaccaggacacgcctaatctgaggagtgtccgtgcttcataggt 18513173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 112
Target Start/End: Original strand, 29205532 - 29205587
Alignment:
Q  57 cgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||||| |||||||||| |||||||  |||||| ||| ||||||||||||||||||    
T  29205532 cgacacatgtccgacactgggacacgcctaatccgaggagtgttcgtgcttcatag 29205587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 112
Target Start/End: Original strand, 37203324 - 37203371
Alignment:
Q  65 gtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||||||||||||||||  |||||| ||||||||| ||||||||||||    
T  37203324 gtccgacaccgggacacgtctaatccgagaagtgtccgtgcttcatag 37203371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 4157172 - 4157266
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 110  Q
    ||||||||||| |||| ||||  | ||||||||||| ||| |||||| |||||||||||| || ||| |||||  ||| |||||  |||||||||    
T  4157172 atcacataatttagtgcaattacaagtgtcggtgtcggacacgacacatgtccgacaccgagaaacacctaattcgaggagtgtctgtgcttcat 4157266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 8402783 - 8402721
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacac 73  Q
    |||| |||| |||||||||||||||| ||||| || ||||| ||| |||||| ||||||||||    
T  8402783 agaaaatcatataattcagtgtaattatatgtctcagtgtcagacacgacacttgtccgacac 8402721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 10133756 - 10133830
Alignment:
Q  41 gtgtcggtgtctgacgc-gacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 114  Q
    ||||||||||| ||| | ||| ||||||||||||| ||||||| |||||||||| |  |||| ||||||||||||    
T  10133756 gtgtcggtgtcagacactgacgcgtgtccgacaccaggacacacctaatctgaggaacgttcatgcttcataggt 10133830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 114
Target Start/End: Complemental strand, 11596345 - 11596295
Alignment:
Q  64 tgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 114  Q
    ||||||||| ||||||||  |||||||||| ||||| ||||||||||||||    
T  11596345 tgtccgacatcgggacacgcctaatctgaggagtgtccgtgcttcataggt 11596295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 15029785 - 15029823
Alignment:
Q  13 aatatcacataattcagtgtaattctatgtgtcggtgtc 51  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  15029785 aatatcacataattcagtgtaattatatgtgttggtgtc 15029823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 114
Target Start/End: Original strand, 16073421 - 16073515
Alignment:
Q  20 cataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 114  Q
    |||||||||||||||||  | ||||||||||| ||| ||| || ||||||||||   |||||  |||||| ||| ||||| | ||||||||||||    
T  16073421 cataattcagtgtaattacaagtgtcggtgtcggacacgatacatgtccgacactaagacacgcctaatccgaggagtgtccatgcttcataggt 16073515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 28000725 - 28000672
Alignment:
Q  57 cgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 110  Q
    ||||||||||| ||||||| |||||| |||||||||  ||||| ||||||||||    
T  28000725 cgacacgtgtctgacaccgagacacacctaatctgatgagtgtccgtgcttcat 28000672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 5775399 - 5775359
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtc 51  Q
    |||| ||||||||||| ||||||||| ||||||||||||||    
T  5775399 agaaaatcacataattaagtgtaattatatgtgtcggtgtc 5775359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 21945529 - 21945585
Alignment:
Q  19 acataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccg 75  Q
    ||||||||||||||||||  | ||||||||||| |||  ||||| ||||||||||||    
T  21945529 acataattcagtgtaattacaagtgtcggtgtcggacatgacacatgtccgacaccg 21945585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 47
Target Start/End: Original strand, 40613468 - 40613504
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcgg 47  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  40613468 agaaaatcacataattcagtgtaattatatgtgtcgg 40613504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 40784029 - 40784073
Alignment:
Q  69 gacaccgggacacagctaatctgagaagtgttcgtgcttcatagg 113  Q
    |||||||||||||| |||||| ||| ||||| |||||||||||||    
T  40784029 gacaccgggacacacctaatccgaggagtgtccgtgcttcatagg 40784073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 42640552 - 42640643
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||||||||||||||||||||  | |||||||||||      |||||||||||| |||| ||||||  |||||| ||| ||| | ||||||||||||    
T  42640552 atcacataattcagtgtaattacaagtgtcggtgtc-----ggacacgtgtccggcaccaggacacgcctaatccgaggagtttccgtgcttcatag 42640643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 8e-27; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 11 - 112
Target Start/End: Original strand, 7377997 - 7378098
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 110  Q
    |||| ||||||||||||| ||||||| |||||||||||||| ||| ||||| |  |||||||||||||||| ||||||||||||||||| ||||||||||    
T  7377997 agaaaatcacataattcaatgtaattatatgtgtcggtgtcggacacgacatgcatccgacaccgggacacggctaatctgagaagtgtccgtgcttcat 7378096  T
Q  111 ag 112  Q
    ||    
T  7378097 ag 7378098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 28152121 - 28152217
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||||||||||||||||||||  | ||||||||||| ||| ||||||||||||||||||||||||   |||||| ||| ||||||||||||||||||    
T  28152121 atcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgggacaggcctaatccgaggagtgttcgtgcttcatag 28152217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 34595157 - 34595253
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||||||||||||||||||||  | ||||||||||| ||| ||||||||||| |||||||||||||| |||||| ||| ||||| ||||||||||||    
T  34595157 atcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtctgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 34595253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 28715321 - 28715418
Alignment:
Q  19 acataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggtaa 116  Q
    ||||||||||||||||||  | ||||||||||| ||| |||||||||| ||||||||||||||  |||||  ||||||||| ||||||||||||||||    
T  28715321 acataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgttcgacaccgggacacgcctaattcgagaagtgtacgtgcttcataggtaa 28715418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 9658896 - 9658967
Alignment:
Q  10 aagaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacac 81  Q
    ||||| ||||||||||||||||||||| ||| |||||||||  ||| ||||||||||| |||||||| ||||    
T  9658896 aagaaaatcacataattcagtgtaattatatttgtcggtgttagacacgacacgtgtctgacaccggaacac 9658967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 109
Target Start/End: Complemental strand, 32978933 - 32978842
Alignment:
Q  18 cacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttca 109  Q
    ||||||||| |||||||||  | ||||||||||| ||| |||||| ||||||||||||||||||  ||||||  || ||||| |||||||||    
T  32978933 cacataattaagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccgggacacgtctaatccaaggagtgtccgtgcttca 32978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 7265634 - 7265569
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgg 76  Q
    |||| ||||||||||||||||||||| |||||||||||||| ||| | | || |||||||||||||    
T  7265634 agaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacaatacatgtccgacaccgg 7265569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 8776963 - 8776906
Alignment:
Q  57 cgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 114  Q
    ||||||||||||||||||| |||||| |||||| ||| ||||| ||||||||||||||    
T  8776963 cgacacgtgtccgacaccgagacacacctaatccgaggagtgtccgtgcttcataggt 8776906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 10339125 - 10339052
Alignment:
Q  41 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 114  Q
    ||||||||||| ||| |||||| |||||||||| |||||||  |||||| ||| ||||| ||||||||||||||    
T  10339125 gtgtcggtgtcggacacgacacatgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcataggt 10339052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 9025535 - 9025448
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttca 109  Q
    |||| ||||||||||||||||||||| |||||||||||||           ||||||||||||||||||||  |||||| ||||||||| |||||||||    
T  9025535 agaaaatcacataattcagtgtaattatatgtgtcggtgt-----------cgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttca 9025448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 12627613 - 12627534
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaa 95  Q
    ||||||||||||||||||||  ||||||||| |||| ||| | |||| |||||||||||| |||||  |||||| |||||    
T  12627613 atcacataattcagtgtaataatatgtgtcgatgtcggacaccacacatgtccgacaccgagacactcctaatccgagaa 12627534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 17841625 - 17841530
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcata 111  Q
    ||||||||||| |||||||||  | ||| ||||||| ||| ||||| ||||||||||| | |||||  |||||| ||| ||||| |||||||||||    
T  17841625 atcacataatttagtgtaattacaagtgacggtgtcggacacgacatgtgtccgacactgagacacgcctaatccgaggagtgtccgtgcttcata 17841530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 111
Target Start/End: Original strand, 31959213 - 31959268
Alignment:
Q  56 gcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcata 111  Q
    |||||| |||||||||||||||||||| |||||| ||| ||||| |||||||||||    
T  31959213 gcgacatgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 31959268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 33001325 - 33001266
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccg 75  Q
    ||||||||||| | ||||||| |||||||||||||| ||| ||||||||||| |||||||    
T  33001325 atcacataattaaatgtaattatatgtgtcggtgtcggacacgacacgtgtctgacaccg 33001266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 4877967 - 4878064
Alignment:
Q  17 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggta 115  Q
    |||||||||| ||| |||||  | ||||||||||| ||| |||||| ||||||||| | ||||||  |||||| ||| ||||| |||||||||||||||    
T  4877967 tcacataattaagtataattacaagtgtcggtgtcggacacgacacatgtccgaca-caggacacgcctaatccgaggagtgtccgtgcttcataggta 4878064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 7977863 - 7977770
Alignment:
Q  19 acataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||||||||||||||||  | ||||||||||| ||| | |||  ||||||||| ||  ||||  ||||||| || ||||||||||||||||||    
T  7977863 acataattcagtgtaattacaagtgtcggtgtcggacacaacatatgtccgacaacgaaacacgcctaatctaaggagtgttcgtgcttcatag 7977770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 8365519 - 8365446
Alignment:
Q  41 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 114  Q
    |||||||| || ||| ||||||||||||||||| |||||||  |||||| ||| ||| | ||||||||||||||    
T  8365519 gtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtctccgtgcttcataggt 8365446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 10294166 - 10294239
Alignment:
Q  41 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 114  Q
    |||| |||||| ||| ||||| |||||||| ||  |||||||||||||||||| |||||  |||||||||||||    
T  10294166 gtgttggtgtcggacacgacatgtgtccgaaactaggacacagctaatctgaggagtgtctgtgcttcataggt 10294239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 13360413 - 13360313
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 110  Q
    |||| ||||||||||||||||||||| ||||| |||||||| ||| | |||  |||||||||| | |||||  |||||| ||  ||||| ||||||||||    
T  13360413 agaaaatcacataattcagtgtaattatatgtttcggtgtcagacacaaca-atgtccgacactgagacacgcctaatccgaagagtgtccgtgcttcat 13360315  T
Q  111 ag 112  Q
    ||    
T  13360314 ag 13360313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 16833331 - 16833428
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatagg 113  Q
    |||||||| ||||||||||||  | ||||||||||  ||| ||||||| |||||||||| ||||||| | |||| ||| |||||  || |||||||||    
T  16833331 atcacatacttcagtgtaattacaagtgtcggtgttagacacgacacgcgtccgacaccaggacacaccgaatccgaggagtgtctgtacttcatagg 16833428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 116
Target Start/End: Original strand, 7740664 - 7740764
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggta 115  Q
    |||||| |||| ||||||||| |||||||| ||||| ||| ||||||||  |||| ||| ||||||  ||   ||||||||||| |||| ||||||||||    
T  7740664 atcacaaaattgagtgtaattatatgtgtcagtgtcggacacgacacgtacccgataccaggacacgcctgccctgagaagtgtccgtgtttcataggta 7740763  T
Q  116 a 116  Q
    |    
T  7740764 a 7740764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 17327696 - 17327588
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtct-----gacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgc 105  Q
    |||| ||||||||||| ||||||| | |||||||| |||||      ||| ||||||||||| ||||| |||||||  |||||| ||| ||||| |||||    
T  17327696 agaaaatcacataatttagtgtaactatatgtgtcagtgtcgtgtcggacacgacacgtgtctgacacagggacacgcctaatccgaggagtgtccgtgc 17327597  T
Q  106 ttcataggt 114  Q
    |||||||||    
T  17327596 ttcataggt 17327588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 19044482 - 19044522
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtc 51  Q
    |||||||||||||||||||||| ||| ||||||||||||||    
T  19044482 agaatatcacataattcagtgttattatatgtgtcggtgtc 19044522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 21924976 - 21924936
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtc 51  Q
    ||||||||| |||||||||||||||| ||||||||||||||    
T  21924976 agaatatcaaataattcagtgtaattatatgtgtcggtgtc 21924936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 24645504 - 24645600
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||||||||||||| || ||  | ||||||||||| ||| ||||||||||||||||||  |||||  |||||| ||  |||||  |||||||||||    
T  24645504 atcacataattcagtatagttacaagtgtcggtgtcagacacgacacgtgtccgacaccaagacacgtctaatccgaagagtgtctgtgcttcatag 24645600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 7027265 - 7027300
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtc 51  Q
    ||||||||||||||||||||| ||||||||||||||    
T  7027265 atcacataattcagtgtaattatatgtgtcggtgtc 7027300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 112
Target Start/End: Complemental strand, 9107370 - 9107299
Alignment:
Q  41 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||||||||| ||| | ||  |||||||||||||||||||| |||||| ||| ||||  ||||||||||||    
T  9107370 gtgtcggtgtcggacacaacgtgtgtccgacaccgggacacacctaatccgaggagtgcccgtgcttcatag 9107299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 112
Target Start/End: Original strand, 16766756 - 16766827
Alignment:
Q  41 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||||||||| ||| | |||||||||||||||||||||||  |||||| ||  | ||| ||||||||||||    
T  16766756 gtgtcggtgtcggacacaacacgtgtccgacaccgggacacgcctaatccgaagaatgtccgtgcttcatag 16766827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 19040370 - 19040421
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacac 62  Q
    |||| ||||||||||||||||||||| |||||||| ||||| ||| ||||||    
T  19040370 agaaaatcacataattcagtgtaattatatgtgtctgtgtcggacacgacac 19040421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 6898314 - 6898220
Alignment:
Q  19 acataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatagg 113  Q
    |||||||| |||||||||  | ||||||||||| ||| |||  ||||||| ||||||  ||||  |||||| ||  |||||||||||||||||||    
T  6898314 acataattaagtgtaattacaagtgtcggtgtcggacacgaagcgtgtccaacaccgaaacacgcctaatccgatgagtgttcgtgcttcatagg 6898220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 109
Target Start/End: Complemental strand, 8389457 - 8389411
Alignment:
Q  63 gtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttca 109  Q
    |||||||||||||||||||| |||||| ||| ||||| |||||||||    
T  8389457 gtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttca 8389411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 112
Target Start/End: Original strand, 9027236 - 9027286
Alignment:
Q  62 cgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||||||||||||||||||| |||||||  || |||||| |||||||||||    
T  9027236 cgtgtccgacaccgggacacggctaatccaaggagtgtttgtgcttcatag 9027286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 31579266 - 31579211
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtcc 68  Q
    |||| ||||||||||||||||||||  |||||||||||||| ||| |||||| |||||    
T  31579266 agaaaatcacataattcagtgtaat--tatgtgtcggtgtcggacacgacacatgtcc 31579211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 112
Target Start/End: Complemental strand, 32511708 - 32511606
Alignment:
Q  10 aagaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttca 109  Q
    ||||| ||||||||||||||||||||| || |||| |||||| ||  |||||  |||| |||| |||  |||  |||||| ||| ||||| |||||||||    
T  32511708 aagaaaatcacataattcagtgtaattataagtgttggtgtcggatacgacatatgtctgacatcggagcacgcctaatcggaggagtgtccgtgcttca 32511609  T
Q  110 tag 112  Q
    |||    
T  32511608 tag 32511606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 12236723 - 12236780
Alignment:
Q  57 cgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 114  Q
    |||||| ||| || |||||||||||  |||| ||||| ||||||||||||||||||||    
T  12236723 cgacacatgttcggcaccgggacacgcctaacctgaggagtgttcgtgcttcataggt 12236780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 5000625 - 5000557
Alignment:
Q  42 tgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 110  Q
    |||||||||| ||| |||||| | ||||||||| ||||||  |||||| ||  ||||||||||||||||    
T  5000625 tgtcggtgtcagacacgacacatatccgacaccaggacacgtctaatccgaagagtgttcgtgcttcat 5000557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 9617452 - 9617492
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtc 51  Q
    |||| ||||||||||||| ||||||| ||||||||||||||    
T  9617452 agaaaatcacataattcaatgtaattatatgtgtcggtgtc 9617492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 9629401 - 9629441
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtc 51  Q
    |||| ||||||||||||| ||||||| ||||||||||||||    
T  9629401 agaaaatcacataattcaatgtaattatatgtgtcggtgtc 9629441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 26562707 - 26562747
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtc 51  Q
    |||| ||||||||||||||||||||| ||||||||| ||||    
T  26562707 agaaaatcacataattcagtgtaattatatgtgtcgatgtc 26562747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 30851630 - 30851674
Alignment:
Q  23 aattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtc 67  Q
    |||||| ||||||| |||||||||||||| ||| |||||||||||    
T  30851630 aattcaatgtaattatatgtgtcggtgtcggacacgacacgtgtc 30851674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 34895016 - 34894968
Alignment:
Q  64 tgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||||||||| |||||||| ||||| |||| ||||| ||||||||||||    
T  34895016 tgtccgacacagggacacacctaatatgaggagtgtccgtgcttcatag 34894968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 40993371 - 40993272
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggta 115  Q
    ||||||||||||||||||||| |||||||||||||| ||| |||||| ||||||||||||||||||  |||||| ||| ||||| | |||||||||||||    
T  40993371 atcacataattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccatgcttcataggta 40993272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 18426972 - 18427068
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||||||||||| |||||||| ||| |||||||||| ||  ||||||||||||| |||||||||||| |||||||||| ||||| |||| |||||||    
T  18426972 atcacataattcggtgtaattatatatgtcggtgtcggatacgacacgtgtccggcaccgggacacacctaatctgaggagtgtccgtgtttcatag 18427068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 55401098 - 55401199
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggta 115  Q
    ||||||||||| |||||||||  | ||||||||||| ||| ||||||||||||||||||| |||||  |||||| ||| ||||| |||||||||||| ||    
T  55401098 atcacataatttagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatagcta 55401197  T
Q  116 aa 117  Q
    ||    
T  55401198 aa 55401199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 115
Target Start/End: Complemental strand, 41961650 - 41961576
Alignment:
Q  41 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggta 115  Q
    |||||||| || ||| ||||||||||||||||| |||||||  |||||| ||||||||| |||||||||||||||    
T  41961650 gtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgagaagtgtccgtgcttcataggta 41961576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 20503491 - 20503584
Alignment:
Q  19 acataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||||||||||||||||  | ||||||||||  ||| |||||| |||| |||||||||||||  |||||| ||| ||||| ||||||||||||    
T  20503491 acataattcagtgtaattacaagtgtcggtgttggacacgacacatgtctgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 20503584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 112
Target Start/End: Original strand, 35222956 - 35223057
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 110  Q
    |||| ||||||||||||| ||||||| |||||||||||||| |||  |||||||||| ||||| |||||||   | ||| ||| ||||| ||||||||||    
T  35222956 agaaaatcacataattcaatgtaattatatgtgtcggtgtcggacatgacacgtgtctgacacggggacacgctttatccgaggagtgtccgtgcttcat 35223055  T
Q  111 ag 112  Q
    ||    
T  35223056 ag 35223057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 8789591 - 8789489
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcg--acacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttc 108  Q
    |||| |||||||||||| |||||||| |||||||||||||| ||| ||  |||| |||| ||||||| |||||  |||||| ||| ||||| ||||||||    
T  8789591 agaaaatcacataattccgtgtaattatatgtgtcggtgtcggacacgacacacatgtcggacaccgagacacgcctaatccgaggagtgtccgtgcttc 8789492  T
Q  109 ata 111  Q
    |||    
T  8789491 ata 8789489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 25775532 - 25775624
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 110  Q
    |||||||||||||||||||||  | ||||||||||| ||| || |  |||||||||||| ||||||  |||||| ||| ||||||||||||||||    
T  25775532 atcacataattcagtgtaattacaagtgtcggtgtcggacacgtc--gtgtccgacaccaggacacgcctaatccgaggagtgttcgtgcttcat 25775624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 112
Target Start/End: Original strand, 11251996 - 11252095
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 110  Q
    |||| |||||||||||||||||||||  ||||||||||||| ||| | ||||||||||| || ||| ||||  |||||| ||| |||||  |||||||||    
T  11251996 agaaaatcacataattcagtgtaatt--atgtgtcggtgtcagacacaacacgtgtccggcatcggaacacgcctaatccgaggagtgtctgtgcttcat 11252093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 10954975 - 10955040
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacac 81  Q
    ||||||||||||||||||||   | ||||||||||| ||| ||||||||||||||||| |||||||    
T  10954975 atcacataattcagtgtaatcacaagtgtcggtgtcggacacgacacgtgtccgacactgggacac 10955040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 14209172 - 14209245
Alignment:
Q  41 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 114  Q
    ||||||||||| ||| |||||||||| ||||| ||||| ||| ||||||  |||||||| ||||||||||||||    
T  14209172 gtgtcggtgtcggacacgacacgtgtacgacatcgggatacacctaatccaagaagtgtccgtgcttcataggt 14209245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 112
Target Start/End: Original strand, 25074841 - 25074914
Alignment:
Q  40 tgtgtcggtgtctgacgcga-cacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||||||||||||||| | | | |||||||||||| |||||||| |||||| ||| ||||||||||||||||||    
T  25074841 tgtgtcggtgtctgacaccaacgcgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcatag 25074914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 25093520 - 25093617
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttc 108  Q
    |||| |||||| |||||||||||||| |||||||||||||| ||| | |||| |||||||||| |   |||  |||||||||  ||||||||||||||    
T  25093520 agaaaatcacacaattcagtgtaattatatgtgtcggtgtcggacacaacacatgtccgacactgaagcacttctaatctgaagagtgttcgtgcttc 25093617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 27505305 - 27505370
Alignment:
Q  47 gtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||||||| ||||||||||||||||||||||||   |||||| ||| ||||| ||||||||||||    
T  27505305 gtgtctgacacgacacgtgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttcatag 27505370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 40052380 - 40052433
Alignment:
Q  61 acgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 114  Q
    |||||||||||||||||||||  |||||| ||| ||||||||||||||||||||    
T  40052380 acgtgtccgacaccgggacacgcctaatccgaggagtgttcgtgcttcataggt 40052433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 49651771 - 49651714
Alignment:
Q  57 cgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 114  Q
    |||||| | ||||||||||||||||| |||||| ||||||||| ||||||||||||||    
T  49651771 cgacacatatccgacaccgggacacacctaatccgagaagtgtccgtgcttcataggt 49651714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 3631708 - 3631772
Alignment:
Q  17 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacac 81  Q
    |||||||||||||||||||| |||||| | ||||| ||| |||||| ||||||||||| ||||||    
T  3631708 tcacataattcagtgtaattatatgtgccagtgtcggacacgacacatgtccgacaccaggacac 3631772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 14216957 - 14217021
Alignment:
Q  47 gtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcata 111  Q
    ||||| ||| |||||||||| |||||| |||||||| |||||| ||||||||| |||||||||||    
T  14216957 gtgtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttcata 14217021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 14223086 - 14223150
Alignment:
Q  47 gtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcata 111  Q
    ||||| ||| |||||||||| |||||| |||||||| |||||| ||||||||| |||||||||||    
T  14223086 gtgtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttcata 14223150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 23657759 - 23657858
Alignment:
Q  13 aatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||||| |||||||||||||||| ||  | |||||||| |||  ||||  ||||||| ||||||||||| |||||| || |||||| ||| ||||||||    
T  23657759 aatatcatataattcagtgtaattataaatatcggtgtcggacatgacatttgtccgataccgggacacacctaatccgaaaagtgtccgtacttcatag 23657858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 82
Target Start/End: Original strand, 45451571 - 45451642
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacaca 82  Q
    |||| |||||||| |||||| ||||  |||||||||||||| ||| |||||| |||||||||||| ||||||    
T  45451571 agaaaatcacatacttcagtataataatatgtgtcggtgtcggacacgacacatgtccgacaccgagacaca 45451642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 112
Target Start/End: Original strand, 17276792 - 17276846
Alignment:
Q  58 gacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||||||||||||||||| ||| || |||||| ||||||||| ||||||||||||    
T  17276792 gacacgtgtccgacaccgagacgcacctaatccgagaagtgtccgtgcttcatag 17276846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 2941576 - 2941637
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgaca 72  Q
    |||| |||||| ||| |||||||||| |||||||||||||| ||| ||||||||||| ||||    
T  2941576 agaaaatcacaaaatacagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgaca 2941637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 110
Target Start/End: Complemental strand, 4987291 - 4987222
Alignment:
Q  41 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 110  Q
    ||||||||||  ||| |||||||||||||||||||||||||  |||||| ||| ||||| ||| ||||||    
T  4987291 gtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtacttcat 4987222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 13845566 - 13845465
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 110  Q
    |||| |||||| ||| |||||||||| |||||||||||||| ||| ||| ||||||| ||||| | |||||  || |||  || ||||| ||||||||||    
T  13845566 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgagacgtgtctgacacggagacacgccttatccaaggagtgtccgtgcttcat 13845467  T
Q  111 ag 112  Q
    ||    
T  13845466 ag 13845465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 28918024 - 28918120
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtc--tgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 110  Q
    |||||||||||||||||||||  | |||||||||||   ||| ||||||||||||||||| |||||||  ||||||  || ||||| | ||||||||    
T  28918024 atcacataattcagtgtaattacaagtgtcggtgtcgtggacacgacacgtgtccgacactgggacacgcctaatccaaggagtgtccctgcttcat 28918120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 29508467 - 29508567
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcg------gtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttca 109  Q
    |||| |||||||||||||||| |||||||||      ||||| ||| ||||||  |||||||||||||||||  ||||||  |||||||| |||||||||    
T  29508467 atcatataattcagtgtaattatatgtgtcgatgttggtgtcggacacgacacacgtccgacaccgggacacgtctaatccaagaagtgtccgtgcttca 29508566  T
Q  110 t 110  Q
    |    
T  29508567 t 29508567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 3865698 - 3865749
Alignment:
Q  17 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtcc 68  Q
    |||||||||||||| |||||  | ||||||||||||||| ||||||||||||    
T  3865698 tcacataattcagtataattacaagtgtcggtgtctgacacgacacgtgtcc 3865749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 7928473 - 7928508
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtc 51  Q
    ||||||||||||||||||||| ||||||||||||||    
T  7928473 atcacataattcagtgtaattatatgtgtcggtgtc 7928508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 112
Target Start/End: Original strand, 25064966 - 25065037
Alignment:
Q  41 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||| |||||| ||| ||||||||||| ||||||||||||| | | ||| ||| |||||||||||| |||||    
T  25064966 gtgttggtgtcggacacgacacgtgtctgacaccgggacacggtttatccgaggagtgttcgtgctccatag 25065037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 112
Target Start/End: Complemental strand, 8101946 - 8101892
Alignment:
Q  58 gacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||||||||| ||||| || ||||  |||||||||| ||||||||||||||||||    
T  8101946 gacacgtgtcggacactggtacacgtctaatctgaggagtgttcgtgcttcatag 8101892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 112
Target Start/End: Original strand, 11610578 - 11610628
Alignment:
Q  62 cgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||||||||| ||||||||  |||||||||| ||||| ||||||||||||    
T  11610578 cgtgtccgacatcgggacacgcctaatctgaggagtgtccgtgcttcatag 11610628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 112
Target Start/End: Complemental strand, 34185106 - 34185052
Alignment:
Q  58 gacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||| |||||||||||||||||||  |||||| ||| ||||| ||||||||||||    
T  34185106 gacatgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 34185052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 7171524 - 7171621
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatagg 113  Q
    |||| ||||||| ||||||||  | |||| |||||| ||| ||||||||||||||||||| |||||  ||||||  || |||||   |||||||||||    
T  7171524 atcatataattcggtgtaattacaagtgttggtgtcggacacgacacgtgtccgacaccgcgacacgcctaatccaaggagtgtatatgcttcatagg 7171621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 52369851 - 52369908
Alignment:
Q  57 cgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 114  Q
    |||| ||||||| ||||||||||||| ||| || ||| ||||| ||||||||||||||    
T  52369851 cgacgcgtgtccaacaccgggacacacctattccgaggagtgtccgtgcttcataggt 52369908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 112
Target Start/End: Original strand, 8903514 - 8903554
Alignment:
Q  72 accgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||||||||| |||||| ||| ||||||||||||||||||    
T  8903514 accgggacacacctaatccgaggagtgttcgtgcttcatag 8903554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 14832158 - 14832198
Alignment:
Q  41 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacac 81  Q
    |||||||| || ||| |||||||||||||||||||||||||    
T  14832158 gtgtcggtatcggacacgacacgtgtccgacaccgggacac 14832198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 16192727 - 16192667
Alignment:
Q  47 gtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgctt 107  Q
    ||||| ||| ||||||||||| |||||||||||| | ||||| |||| |||||| ||||||    
T  16192727 gtgtcagacacgacacgtgtctgacaccgggacatacctaatatgaggagtgtttgtgctt 16192667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 111
Target Start/End: Original strand, 25211604 - 25211648
Alignment:
Q  67 ccgacaccgggacacagctaatctgagaagtgttcgtgcttcata 111  Q
    |||||||| ||||||  ||||||||||||||||| ||||||||||    
T  25211604 ccgacaccaggacacgcctaatctgagaagtgtttgtgcttcata 25211648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 5e-25; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 110
Target Start/End: Complemental strand, 29163417 - 29163323
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 110  Q
    ||||||||||||| | ||||| |||||||||||||| ||| ||||||||| | ||||||||||||| ||||||| ||||||||||||||||||||    
T  29163417 atcacataattcaatttaattatatgtgtcggtgtcggacacgacacgtgcctgacaccgggacacggctaatcagagaagtgttcgtgcttcat 29163323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 5898302 - 5898204
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 114  Q
    ||||||||||||||||||||| |||| ||||||||| ||| |||||||||||| ||||||||||||  |||||| ||| ||||| ||||||| ||||||    
T  5898302 atcacataattcagtgtaattatatgcgtcggtgtcagacacgacacgtgtccaacaccgggacacgtctaatccgaggagtgtccgtgctttataggt 5898204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 1815280 - 1815377
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatagg 113  Q
    |||||||||||||||||||||  | ||||||||||| ||| |||||| ||||||||||||||||||  |||||||||| ||||  |||| ||||||||    
T  1815280 atcacataattcagtgtaattacaagtgtcggtgtccgacacgacacatgtccgacaccgggacacgcctaatctgaggagtgaccgtgattcatagg 1815377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 111
Target Start/End: Original strand, 12918968 - 12919063
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcata 111  Q
    ||||||||||||| ||| ||| ||||||| ||| || ||| ||||||||||| ||||| ||||||| ||| ||| |||||||||||||||||||||    
T  12918968 atcacataattcaatgtgattatatgtgttggtatcggacacgacacgtgtctgacacggggacacggcttatccgagaagtgttcgtgcttcata 12919063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 113
Target Start/End: Original strand, 37598861 - 37598951
Alignment:
Q  23 aattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatagg 113  Q
    |||||||||||||| || ||||||||||| ||| ||||||||||||||||  |||||||  |||||| ||| ||||| |||||||||||||    
T  37598861 aattcagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacaatgggacacgcctaatccgaggagtgtccgtgcttcatagg 37598951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 51410048 - 51410146
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 114  Q
    |||||||||||||||||||||  | ||||||||||| ||| |||||||| |||||||||| |||||  ||||||  || ||| ||||||||||||||||    
T  51410048 atcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtatccgacaccgagacacgcctaatccaaggagtattcgtgcttcataggt 51410146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 115
Target Start/End: Complemental strand, 2896162 - 2896058
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 110  Q
    |||| ||||||||||||||||||  | ||| |||||||||| ||| ||||| |||||||| ||||||||||| ||||||  |||||||| | || |||||    
T  2896162 agaaaatcacataattcagtgtagctatatatgtcggtgtcagacacgacatgtgtccgagaccgggacacacctaatccaagaagtgtccatgtttcat 2896063  T
Q  111 aggta 115  Q
    |||||    
T  2896062 aggta 2896058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 40181889 - 40181976
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtg 98  Q
    |||| ||||||||||||||||||||| ||||| |||||||| ||| | |||||||||| ||||||||||||  |||||| ||| ||||    
T  40181889 agaaaatcacataattcagtgtaattatatgtatcggtgtcggacacaacacgtgtcctacaccgggacacgcctaatccgaggagtg 40181976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 40258969 - 40258874
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcata 111  Q
    |||||||||||||||||||||  | ||||||||||| ||| |||||| ||||||||||| ||||||  |||||| ||| ||||| | |||||||||    
T  40258969 atcacataattcagtgtaattacaagtgtcggtgtcagacacgacacctgtccgacaccaggacacgcctaatccgaggagtgtccatgcttcata 40258874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 9828103 - 9828176
Alignment:
Q  41 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 114  Q
    ||||| ||||| ||| |||||||||||||||||||||||||  |||||| ||| ||||| ||||||||||||||    
T  9828103 gtgtccgtgtcagacacgacacgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcataggt 9828176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 18190141 - 18190048
Alignment:
Q  19 acataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||||||||||||||||  | |||||| |||| ||| | |||||||||||||||||||||||| |||||| ||| |||||  | |||||||||    
T  18190141 acataattcagtgtaattacaagtgtcgatgtcagacacaacacgtgtccgacaccgggacacacctaatccgaggagtgtatgcgcttcatag 18190048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 18337352 - 18337448
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||||||||||||||||||||  | ||||||||||| ||| | ||||||||||||||| ||||||   || ||| ||| ||||| ||||||||||||    
T  18337352 atcacataattcagtgtaattacaagtgtcggtgtcggacacaacacgtgtccgacactgggacatgcctgatccgaggagtgtccgtgcttcatag 18337448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 22515923 - 22515827
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||||||||| |||||||||  | ||||||||||| ||| |||||| | |||||||||| |||||  |||||| ||| ||||| ||||||||||||    
T  22515923 atcacataatttagtgtaattacaagtgtcggtgtcggacacgacacatatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 22515827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 110
Target Start/End: Complemental strand, 1486745 - 1486646
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtct-----gacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 110  Q
    ||||||||||||||||||||| || |||||||||||      ||| |||||||||||||||||||||||||  |||||| ||| |||||  |||||||||    
T  1486745 atcacataattcagtgtaattataagtgtcggtgtcgtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 17778615 - 17778670
Alignment:
Q  55 cgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 110  Q
    ||||||||||||||||||||||||||   |||||| ||||||||||||||||||||    
T  17778615 cgcgacacgtgtccgacaccgggacatgcctaatccgagaagtgttcgtgcttcat 17778670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 36878479 - 36878541
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacac 73  Q
    |||| ||||||||||||||||||||| || ||||||||||||||| ||| || ||||||||||    
T  36878479 agaaaatcacataattcagtgtaattataggtgtcggtgtctgacacgaaacatgtccgacac 36878541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 110
Target Start/End: Complemental strand, 42359485 - 42359391
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 110  Q
    |||||| ||||||||||||||  | ||||||||||| |||  |||  |||||||||||||||||||  |||||| ||| ||||| ||||||||||    
T  42359485 atcacaaaattcagtgtaattacaagtgtcggtgtcggacaagacgtgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 42359391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 40917808 - 40917881
Alignment:
Q  41 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 114  Q
    ||||||||||  ||| |||||||||||||||||||||||||  |||||| ||| | ||| ||||||||||||||    
T  40917808 gtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggactgtccgtgcttcataggt 40917881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 6427539 - 6427595
Alignment:
Q  57 cgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatagg 113  Q
    |||||||||||||||||||||||||  |||||||||  ||||| |||||||||||||    
T  6427539 cgacacgtgtccgacaccgggacacgcctaatctgatgagtgtccgtgcttcatagg 6427595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 40 - 112
Target Start/End: Complemental strand, 32461465 - 32461393
Alignment:
Q  40 tgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||||||||||| ||| ||||||||||| ||||| |||||||  ||||||  |||||||| ||||||||||||    
T  32461465 tgtgtcggtgtcggacacgacacgtgtctgacactgggacacgcctaatccaagaagtgtccgtgcttcatag 32461393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 38078697 - 38078601
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||||||||||| |||||||  | ||||||||||| ||| |||||| ||| | ||||| ||||||  |||||| ||| ||| ||||||||||||||    
T  38078697 atcacataattcaatgtaattacaagtgtcggtgtcggacacgacacatgttcaacaccaggacacgcctaatccgaggagtattcgtgcttcatag 38078601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 46348419 - 46348323
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||| |||||| |||||||||  | ||||||||||| ||| ||||||||||||||||||| |||||  || ||| |||  |||| ||||||||||||    
T  46348419 atcatataatttagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctgatccgaggtgtgtccgtgcttcatag 46348323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 112
Target Start/End: Complemental strand, 18556452 - 18556385
Alignment:
Q  45 cggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||||| ||| |||||||| |||||||| |||||||  |||||| ||||||||| ||||||||||||    
T  18556452 cggtgtcagacccgacacgtatccgacactgggacacgcctaatccgagaagtgtccgtgcttcatag 18556385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 1209821 - 1209867
Alignment:
Q  61 acgtgtccgacaccgggacacagctaatctgagaagtgttcgtgctt 107  Q
    |||||||||||||| ||||||| |||||| |||||||||||||||||    
T  1209821 acgtgtccgacaccaggacacacctaatccgagaagtgttcgtgctt 1209867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 52903272 - 52903365
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||| |||||||||||||||| |||||||||||||| |||   ||  ||||||||||||||||||| ||| ||  ||  ||||| ||||||||||||    
T  52903272 atcatataattcagtgtaattatatgtgtcggtgtcggac---acgtgtgtccgacaccgggacacggcttattcgaagagtgtccgtgcttcatag 52903365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 9690303 - 9690210
Alignment:
Q  23 aattcagtgtaattctatgtgtcggtgtctgacgc-gacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggta 115  Q
    |||||||||||||  |||||||||| ||| | | | ||||||||||||||||||||||||  |||||| |   |||||| ||||||||||||||    
T  9690303 aattcagtgtaatcatatgtgtcggcgtcggccactgacacgtgtccgacaccgggacacgcctaatccggagagtgtttgtgcttcataggta 9690210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 111
Target Start/End: Original strand, 10233271 - 10233374
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtc--tgacgc-gacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgctt 107  Q
    |||| ||||||||||||||||||||| |||||||| ||||   || ||  | || |||||||||||| ||||||| |||||| ||| ||||| |||||||    
T  10233271 agaaaatcacataattcagtgtaattatatgtgtctgtgttggtgtcggtgtcatgtgtccgacaccaggacacacctaatcagaggagtgtccgtgctt 10233370  T
Q  108 cata 111  Q
    ||||    
T  10233371 cata 10233374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 113
Target Start/End: Complemental strand, 20157391 - 20157283
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtct-----gacgc-gacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtg 104  Q
    |||| ||||||||||||||||||||  ||||||||||||||      ||| | ||| |||||||||||||| |||||| ||||| |||| ||| | ||||    
T  20157391 agaaaatcacataattcagtgtaatcatatgtgtcggtgtcgtgtccgacaccgacgcgtgtccgacaccgagacacacctaatttgaggagtatccgtg 20157292  T
Q  105 cttcatagg 113  Q
    |||||||||    
T  20157291 cttcatagg 20157283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 30749858 - 30749898
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtc 51  Q
    |||| ||||||||||||||||||||| ||||||||||||||    
T  30749858 agaaaatcacataattcagtgtaattatatgtgtcggtgtc 30749898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 30771309 - 30771349
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtc 51  Q
    |||| ||||||||||||||||||||| ||||||||||||||    
T  30771309 agaaaatcacataattcagtgtaattatatgtgtcggtgtc 30771349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 34371731 - 34371771
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtc 51  Q
    |||| ||||||||||||||||||||| ||||||||||||||    
T  34371731 agaaaatcacataattcagtgtaattatatgtgtcggtgtc 34371771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 44482248 - 44482288
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtc 51  Q
    |||| ||||||||||||||||||||| ||||||||||||||    
T  44482248 agaaaatcacataattcagtgtaattatatgtgtcggtgtc 44482288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 50
Target Start/End: Complemental strand, 1864921 - 1864882
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgt 50  Q
    |||| ||||||||||||||||||||| |||||||||||||    
T  1864921 agaaaatcacataattcagtgtaattatatgtgtcggtgt 1864882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 9828067 - 9828102
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtc 51  Q
    ||||||||||||||||||||| ||||||||||||||    
T  9828067 atcacataattcagtgtaattttatgtgtcggtgtc 9828102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 17705622 - 17705576
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacg 63  Q
    ||||||||||||||||||||| |||||||| ||||| |||||||||||    
T  17705622 atcacataattcagtgtaattatatgtgtc-gtgtcggacgcgacacg 17705576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 46940798 - 46940747
Alignment:
Q  62 cgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatagg 113  Q
    ||||||||||||||| ||||  |||||| ||| |||||||||||||||||||    
T  46940798 cgtgtccgacaccggaacacgcctaatccgaggagtgttcgtgcttcatagg 46940747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 112
Target Start/End: Original strand, 47989556 - 47989627
Alignment:
Q  41 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||||||||| ||| |||||| |||| |||| ||||||||  |||||| ||| ||||| ||||||||||||    
T  47989556 gtgtcggtgtcggacacgacacatgtctgacatcgggacacgcctaatccgaggagtgtccgtgcttcatag 47989627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 113
Target Start/End: Complemental strand, 7918252 - 7918153
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtc-tgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttca 109  Q
    |||| ||||||||||||||||||||| |||||||| ||||| || |     |||| || |||||| ||||||| |||||| ||| ||||| |||||||||    
T  7918252 agaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtc----aacgtttctgacaccaggacacacctaatccgaggagtgtccgtgcttca 7918157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 13997906 - 13997940
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgt 50  Q
    ||||||||||||||||||||| |||||||||||||    
T  13997906 atcacataattcagtgtaattatatgtgtcggtgt 13997940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 107
Target Start/End: Complemental strand, 23219654 - 23219608
Alignment:
Q  61 acgtgtccgacaccgggacacagctaatctgagaagtgttcgtgctt 107  Q
    ||||||||||||||| |||||| |||||| |||||||||| ||||||    
T  23219654 acgtgtccgacaccgtgacacacctaatccgagaagtgtttgtgctt 23219608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 81
Target Start/End: Complemental strand, 43492535 - 43492465
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacac 81  Q
    |||| ||||| |||||| |||||||| | |||||||||||| ||| | |||| ||||||||||||| ||||    
T  43492535 agaaaatcacgtaattcggtgtaattatgtgtgtcggtgtcagacacaacacatgtccgacaccggcacac 43492465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 99
Target Start/End: Original strand, 2784573 - 2784662
Alignment:
Q  10 aagaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgt 99  Q
    ||||| ||||||||||| ||| ||||| |||||||||||||| ||| | ||  || ||||||||  |||||||  |||| ||||||||||    
T  2784573 aagaaaatcacataattgagtataattatatgtgtcggtgtcagacacaacgtgtatccgacactaggacacacttaatttgagaagtgt 2784662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 5944360 - 5944413
Alignment:
Q  59 acacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||| ||||||||||||||| ||  |||||| ||| ||||||||||||||||||    
T  5944360 acacatgtccgacaccgggatacgcctaatccgaggagtgttcgtgcttcatag 5944413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 112
Target Start/End: Complemental strand, 19562608 - 19562556
Alignment:
Q  59 acacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||||||||||||| |||||||| |||||| ||| |||| |||||||||||||    
T  19562608 acacgtgtccgacacagggacacacctaatccgaggagtg-tcgtgcttcatag 19562556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 10577776 - 10577676
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 110  Q
    |||| |||||| ||| |||||||||| |||||||||| | | ||| |||| |||||| ||||| |||||||  || |||  || ||||| ||||||||||    
T  10577776 agaaaatcacaaaatgcagtgtaattatatgtgtcgggggcggacacgacgcgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 10577677  T
Q  111 a 111  Q
    |    
T  10577676 a 10577676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 23636082 - 23636050
Alignment:
Q  19 acataattcagtgtaattctatgtgtcggtgtc 51  Q
    |||||||||||||||||| ||||||||||||||    
T  23636082 acataattcagtgtaattgtatgtgtcggtgtc 23636050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 25361904 - 25361944
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtc 51  Q
    |||| ||||||||||||||||||||| |||||||| |||||    
T  25361904 agaaaatcacataattcagtgtaattatatgtgtcagtgtc 25361944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 113
Target Start/End: Complemental strand, 31694710 - 31694638
Alignment:
Q  41 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatagg 113  Q
    ||||||||||| ||| | |||| | | ||||||||| ||||  |||||||||| ||||| |||||||||||||    
T  31694710 gtgtcggtgtcggacacaacacatattcgacaccggaacacgcctaatctgaggagtgtccgtgcttcatagg 31694638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 39953187 - 39953147
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtc 51  Q
    |||| ||||||||||| ||||||||| ||||||||||||||    
T  39953187 agaaaatcacataatttagtgtaattgtatgtgtcggtgtc 39953147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 112
Target Start/End: Original strand, 598225 - 598327
Alignment:
Q  10 aagaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttca 109  Q
    ||||| ||||| ||||| | ||||||| || ||||||||||| ||| |||||||||||||||||||||||||  |||||| ||||||||| |||||||||    
T  598225 aagaaaatcacgtaattaaatgtaattgtaagtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttca 598324  T
Q  110 tag 112  Q
    |||    
T  598325 tag 598327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 32287504 - 32287404
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 110  Q
    |||| |||||||||||||||| || | |||||||||||||| |||  |||| |||||||||||||||||||| |||||| ||| ||||| ||||||||||    
T  32287504 agaaaatcacataattcagtgcaagtatatgtgtcggtgtcggacatgacaagtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcat 32287405  T
Q  111 a 111  Q
    |    
T  32287404 a 32287404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 15680832 - 15680929
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatagg 113  Q
    ||||||||||| ||||||||| || ||||||||||| ||| ||||||||||||||||||| |||||  |||||  ||| ||||| |||||||||||||    
T  15680832 atcacataatttagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgtctaattcgaggagtgtccgtgcttcatagg 15680929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 21880178 - 21880271
Alignment:
Q  19 acataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||||||||||||||||  | ||||||||||| ||| |||||| ||||||||||| ||||||  |||||| ||||||||| ||||||||||||    
T  21880178 acataattcagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccaggacacgcctaatccgagaagtgtccgtgcttcatag 21880271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 1401049 - 1401143
Alignment:
Q  17 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatagg 113  Q
    |||||||||||||||||||| || || |||||||| ||| |||||  ||||||||| ||||||||| |||||||||| ||||| | |||||||||||    
T  1401049 tcacataattcagtgtaattataagtatcggtgtccgacacgaca--tgtccgacatcgggacacacctaatctgaggagtgtccatgcttcatagg 1401143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 114
Target Start/End: Complemental strand, 5409836 - 5409769
Alignment:
Q  47 gtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 114  Q
    ||||| ||| |||||||||||||||||||||||||  |||||| ||| ||||| ||||||||||||||    
T  5409836 gtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcataggt 5409769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 5835273 - 5835372
Alignment:
Q  19 acataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggtaaac 118  Q
    |||||||||||||||||| |||||||||||||| |||  |||| ||||| || ||||||||||   ||||| ||||||||||  ||||| |||| |||||    
T  5835273 acataattcagtgtaattatatgtgtcggtgtcagacatgacatgtgtctgataccgggacacgcttaatccgagaagtgtttttgctttatagttaaac 5835372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 111
Target Start/End: Original strand, 32308179 - 32308249
Alignment:
Q  41 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcata 111  Q
    ||||||||||  ||| |||||| |||||||||||| ||||||||||||| ||| ||||||| |||||||||    
T  32308179 gtgtcggtgttggacacgacacatgtccgacaccgagacacagctaatccgaggagtgttcatgcttcata 32308249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 33994236 - 33994333
Alignment:
Q  17 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 114  Q
    ||||||||||||||| ||||  | ||||||||||| ||| |||||| ||||| |||||| |||||  ||||||  || |||||||||| |||||||||    
T  33994236 tcacataattcagtgcaattacaagtgtcggtgtcagacacgacacatgtccaacaccgagacacgcctaatccaaggagtgttcgtgtttcataggt 33994333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 111
Target Start/End: Original strand, 20549809 - 20549909
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 110  Q
    |||| ||||| ||||||||||||||| |||||||||||||| ||| | |||| |||||||||  | |||||  |||||| ||| ||||  ||||||||||    
T  20549809 agaaaatcacgtaattcagtgtaattatatgtgtcggtgtcggacacaacacatgtccgacaatgagacacgcctaatccgaggagtgcccgtgcttcat 20549908  T
Q  111 a 111  Q
    |    
T  20549909 a 20549909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 21864831 - 21864927
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||| |||||| |||||||||  | |||||| |||| ||| |||||||||||||||||||||||||  |||||  ||| |||||  |||||||||||    
T  21864831 atcatataatttagtgtaattacaagtgtcgctgtcggacacgacacgtgtccgacaccgggacacgtctaattcgaggagtgtctgtgcttcatag 21864927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 9482952 - 9483003
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacac 62  Q
    |||| |||||| |||||||||||||| |||||||||||||| ||||||||||    
T  9482952 agaaaatcacacaattcagtgtaattatatgtgtcggtgtcggacgcgacac 9483003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 111
Target Start/End: Original strand, 22484052 - 22484143
Alignment:
Q  20 cataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcata 111  Q
    ||||||||||| ||||| |||||||||||||| |||  ||||| ||||||||| || ||||   || ||| ||||||||| |||||||||||    
T  22484052 cataattcagtataattatatgtgtcggtgtcagacatgacacatgtccgacatcgagacatgtctgatccgagaagtgtccgtgcttcata 22484143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 112
Target Start/End: Original strand, 24339701 - 24339772
Alignment:
Q  41 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||||||||| ||| |||||||| ||||||||||||||||  |||||| ||| ||||  ||||||||||||    
T  24339701 gtgtcggtgtcggacacgacacgtatccgacaccgggacacgcctaatccgaggagtgcccgtgcttcatag 24339772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 27093455 - 27093376
Alignment:
Q  10 aagaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatc 89  Q
    ||||| ||||||||||| ||||||||| |||| ||||||||  ||| ||||| |||||||||||  ||||||| ||||||    
T  27093455 aagaaaatcacataatttagtgtaattatatgcgtcggtgttagacacgacatgtgtccgacactaggacacacctaatc 27093376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 27184846 - 27184925
Alignment:
Q  10 aagaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatc 89  Q
    ||||| ||||||||||| ||||||||| |||| ||||||||  ||| ||||| |||||||||||  ||||||| ||||||    
T  27184846 aagaaaatcacataatttagtgtaattatatgcgtcggtgttagacacgacatgtgtccgacactaggacacacctaatc 27184925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 112
Target Start/End: Complemental strand, 32094020 - 32093954
Alignment:
Q  47 gtgtctgacgcgacacgtgtccgacacc-gggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||| ||| |||||||||||||||||| |||||||  |||||| ||| ||||||||||||||||||    
T  32094020 gtgtcggacacgacacgtgtccgacaccggggacacgcctaatccgaggagtgttcgtgcttcatag 32093954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 112
Target Start/End: Complemental strand, 7133285 - 7133212
Alignment:
Q  40 tgtgtcggtgtctgacgc-gacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||||||||||| ||| | ||| |||||||||||| |||||||| |||||||||| || || ||||||||||||    
T  7133285 tgtgtcggtgtcggacaccgacgcgtgtccgacactgggacacacctaatctgaggagcgtccgtgcttcatag 7133212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 18213074 - 18212973
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 110  Q
    |||| ||||||||||| ||||||||| |||||||||||||| ||| |||| | | || ||||| |||||||  || ||| ||| |||||  |||||||||    
T  18213074 agaaaatcacataatttagtgtaattatatgtgtcggtgtcggacacgacccctttctgacacggggacacgccttatccgaggagtgtctgtgcttcat 18212975  T
Q  111 ag 112  Q
    ||    
T  18212974 ag 18212973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 112
Target Start/End: Complemental strand, 43027469 - 43027404
Alignment:
Q  47 gtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||| ||| |||||||||||||||||||||||||  |||||| ||  ||||| ||||||||||||    
T  43027469 gtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgatgagtgtccgtgcttcatag 43027404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 22602751 - 22602711
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtc 51  Q
    |||| ||||||||||||||||||||| ||||||||||||||    
T  22602751 agaaaatcacataattcagtgtaattatatgtgtcggtgtc 22602711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 42720926 - 42720830
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||||||||| | ||||||| |||||||| ||||||||| | ||| |||| | ||||||| ||||  |||||  || ||||||| |||||||||||    
T  42720926 atcacataattaaatgtaattatatgtgtcagtgtctgacacaacatgtgtacaacaccggaacacgtctaattcgataagtgtttgtgcttcatag 42720830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 640136 - 640171
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtc 51  Q
    ||||||||||||||||||||| ||||||||||||||    
T  640136 atcacataattcagtgtaattatatgtgtcggtgtc 640171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 9778571 - 9778626
Alignment:
Q  59 acacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 114  Q
    |||||||||||||||||||||||  ||||||  || ||||| ||||||||||||||    
T  9778571 acacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcttcataggt 9778626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 112
Target Start/End: Original strand, 17852065 - 17852119
Alignment:
Q  58 gacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||||||||||||||||| |||||| |||||  ||| ||||| ||||||||||||    
T  17852065 gacacgtgtccgacaccgagacacacctaattcgaggagtgtccgtgcttcatag 17852119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 81
Target Start/End: Original strand, 39138462 - 39138532
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacac 81  Q
    |||| ||||||||||||||||||||| ||| |||||||||| ||| ||| || ||||  |||| |||||||    
T  39138462 agaaaatcacataattcagtgtaattatatatgtcggtgtcggacacgatacatgtctaacacggggacac 39138532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 110
Target Start/End: Complemental strand, 26033461 - 26033392
Alignment:
Q  41 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 110  Q
    ||||||||||| |||  ||||||||||||| |||| |||||| |||||| ||| ||||| |||| |||||    
T  26033461 gtgtcggtgtcagacatgacacgtgtccgataccgcgacacacctaatccgaggagtgtccgtgtttcat 26033392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 12278852 - 12278931
Alignment:
Q  10 aagaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcga-cacgtgtccgacaccgggacacagctaatc 89  Q
    ||||| || |||||||||||||||||| ||||||||| |||| ||| | | | |||||| |||||||||||||| ||||||    
T  12278852 aagaaaatgacataattcagtgtaattatatgtgtcg-tgtcggacaccaacgcgtgtctgacaccgggacacacctaatc 12278931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 112
Target Start/End: Original strand, 24105709 - 24105797
Alignment:
Q  24 attcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||||||||||||  | ||||||| ||| | | | ||| |||||||||||||||||||  |||| | ||| |||||| |||||||||||    
T  24105709 attcagtgtaattacaagtgtcggagtcgggcacaacatgtgtccgacaccgggacacgcctaacccgaggagtgtttgtgcttcatag 24105797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 24146834 - 24146878
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgac 55  Q
    |||| ||||||||||||| | ||||| ||||||||||||||||||    
T  24146834 agaaaatcacataattcaatataattatatgtgtcggtgtctgac 24146878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 43564904 - 43565002
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 114  Q
    ||||||||||| ||||||||| || ||||||||||| ||| ||||| ||||||||| |||||||||  |||||| ||||||||| ||||||||||||||    
T  43564904 atcacataatttagtgtaattataagtgtcggtgtcggacacgacatgtgtccgacgccgggacacgcctaatccgagaagtgtccgtgcttcataggt 43565002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 110
Target Start/End: Complemental strand, 21191092 - 21190998
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 110  Q
    |||||||||||||||||||||  | ||||||||||| ||| | ||||||||||||| |||||||||  |||||| ||| ||||| ||||||||||    
T  21191092 atcacataattcagtgtaattacaagtgtcggtgtcggacacaacacgtgtccgactccgggacacgcctaatccgaggagtgtccgtgcttcat 21190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 21576781 - 21576685
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||||||||||||||||||||  | |||||| |||| ||| ||||||||||| ||||| |||||||  |||||| ||| ||||| ||||||||||||    
T  21576781 atcacataattcagtgtaattacaagtgtcgatgtcggacacgacacgtgtctgacactgggacacgcctaatccgaggagtgtccgtgcttcatag 21576685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 30502429 - 30502330
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 110  Q
    |||| ||||| ||||||||||||||| |||||||||||||| ||| |||||| |||||||||| ||||||   ||||||  || | ||||||||||||||    
T  30502429 agaaaatcacttaattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacactgggacatgcctaatccaaggattgttcgtgcttcat 30502330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 30542772 - 30542673
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 110  Q
    |||| ||||| ||||||||||||||| |||||||||||||| ||| |||||| |||||||||| ||||||   ||||||  || | ||||||||||||||    
T  30542772 agaaaatcacttaattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacactgggacatgcctaatccaaggattgttcgtgcttcat 30542673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 14873542 - 14873642
Alignment:
Q  18 cacataattcagtgtaattctatgtgtcggtgtct-----gacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||||||| ||||||||| ||||||||||||||      ||||| |||||||||| ||||||||||||  |||||| ||| ||||| ||||||||||||    
T  14873542 cacataatttagtgtaattatatgtgtcggtgtcatgtcggacgcaacacgtgtccaacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 14873641  T
Q  113 g 113  Q
    |    
T  14873642 g 14873642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 42893383 - 42893479
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||||||||| ||||||||||  | ||||||||||| ||| | |||||||||||||||| ||||||  ||||| |||| ||||| | ||||||||||    
T  42893383 atcacataatccagtgtaattacaagtgtcggtgtcagacacaacacgtgtccgacaccaggacacgcctaatatgaggagtgtccatgcttcatag 42893479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 26312798 - 26312875
Alignment:
Q  22 taattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgt 99  Q
    ||||||||||||||| ||||| |||||||| ||| ||| ||||||| |||||| ||||||| |||||| ||| |||||    
T  26312798 taattcagtgtaattatatgtatcggtgtcggacacgatacgtgtctgacaccaggacacacctaatccgaggagtgt 26312875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 30099070 - 30098982
Alignment:
Q  20 cataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttc 108  Q
    |||||||| |||||||| |||||||||||||| ||  ||||||||||| ||||| |||||||  || |||  || ||||||||||||||    
T  30099070 cataattctgtgtaattatatgtgtcggtgtcggatacgacacgtgtctgacacggggacacgccttatccaaggagtgttcgtgcttc 30098982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 28588715 - 28588612
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 110  Q
    |||| ||||||||||||||||||||| || ||||||||||| ||| |||||| | || |||||| ||||||   ||||| ||  ||||| | ||||||||    
T  28588715 agaaaatcacataattcagtgtaattataggtgtcggtgtcggacacgacacatatctgacaccaggacacgcttaatccgaagagtgtccatgcttcat 28588616  T
Q  111 aggt 114  Q
    ||||    
T  28588615 aggt 28588612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 21542089 - 21542129
Alignment:
Q  41 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacac 81  Q
    ||||||||||| ||| |||||||||||||||||||||||||    
T  21542089 gtgtcggtgtcggacacgacacgtgtccgacaccgggacac 21542129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 112
Target Start/End: Original strand, 7677764 - 7677835
Alignment:
Q  41 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||||||||||||| || ||| ||||||||||||||||||  |||||| ||| || ||  |||||||||||    
T  7677764 gtgtcggtgtctgacacgtcacatgtccgacaccgggacacgcctaatccgaggagagtcggtgcttcatag 7677835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 112
Target Start/End: Complemental strand, 32766943 - 32766872
Alignment:
Q  41 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||||||||||  |  |||||||||||||||||| ||| ||  |||||||||| ||||| ||||||||||||    
T  32766943 gtgtcggtgtcgaaaacgacacgtgtccgacaccaggatacgtctaatctgaggagtgtccgtgcttcatag 32766872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 39268612 - 39268541
Alignment:
Q  38 tatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttca 109  Q
    |||||||||||||  ||| ||||| ||||||||||| |||||||  |||||| ||| ||||| |||||||||    
T  39268612 tatgtgtcggtgttggacacgacatgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 39268541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 112
Target Start/End: Original strand, 39698600 - 39698671
Alignment:
Q  41 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||||||||| ||| ||||| || |||||||||| |||||  |||||| ||| ||||| ||||||||||||    
T  39698600 gtgtcggtgtcggacacgacatgtatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 39698671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 27932261 - 27932355
Alignment:
Q  19 acataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatagg 113  Q
    ||||||||||||||||||  |  | | |||||| ||| ||||||||||| |||||| ||||||  |||||  ||| |||||| ||||||||||||    
T  27932261 acataattcagtgtaattacaaatcttggtgtcggacacgacacgtgtcggacaccaggacacgcctaattcgaggagtgtttgtgcttcatagg 27932355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 114
Target Start/End: Complemental strand, 38464361 - 38464311
Alignment:
Q  64 tgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 114  Q
    ||||||||||||||||||| |||||| ||| |||||  |||||||||||||    
T  38464361 tgtccgacaccgggacacacctaatccgaggagtgtctgtgcttcataggt 38464311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 21194164 - 21194063
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 110  Q
    |||| ||||||| ||||||||||||| || || | |||||  ||| |||||| |||| ||||||||| |||  |||||| ||| ||||| ||||||| ||    
T  21194164 agaaaatcacatcattcagtgtaattataggtattggtgttggacacgacacatgtcagacaccggggcacgcctaatccgaggagtgtccgtgctttat 21194065  T
Q  111 ag 112  Q
    ||    
T  21194064 ag 21194063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 23012449 - 23012380
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggaca 80  Q
    |||| |||| |||||| | ||||||| |||||||||||||  ||| |||||| |||| ||||||||||||    
T  23012449 agaaaatcatataatttaatgtaattatatgtgtcggtgttggacacgacacatgtctgacaccgggaca 23012380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 30098391 - 30098456
Alignment:
Q  47 gtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||| ||| ||||||||||| |||||| ||||||| |||||| ||| | ||| ||||||||||||    
T  30098391 gtgtcggacacgacacgtgtcagacaccaggacacacctaatccgaggaatgtccgtgcttcatag 30098456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 114
Target Start/End: Complemental strand, 32630766 - 32630673
Alignment:
Q  21 ataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 114  Q
    |||||||| ||||||| |||||||| ||||| ||  ||||||||||||||||  | |||||| |||||  ||| |||||   ||||||||||||    
T  32630766 ataattcaatgtaattatatgtgtcagtgtcggatacgacacgtgtccgacattgagacacacctaattcgaggagtgtctatgcttcataggt 32630673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 39758290 - 39758327
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggt 48  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  39758290 agaaaatcacataattcagtgtaattatatgtgtcggt 39758327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 3966521 - 3966561
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtc 51  Q
    |||| |||||| |||||||||||||| ||||||||||||||    
T  3966521 agaaaatcacacaattcagtgtaattatatgtgtcggtgtc 3966561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 6471930 - 6471890
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtc 51  Q
    |||| ||||||||||||||||||||| ||||||| ||||||    
T  6471930 agaaaatcacataattcagtgtaattatatgtgtgggtgtc 6471890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 19820376 - 19820328
Alignment:
Q  64 tgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||||||||||||||||  |||||| ||| ||||| ||||||||||||    
T  19820376 tgtccgacaccgggacacgcctaatcagaggagtgtccgtgcttcatag 19820328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 21522809 - 21522849
Alignment:
Q  41 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacac 81  Q
    ||||||||||| ||| ||||||||||||| |||||||||||    
T  21522809 gtgtcggtgtcggacacgacacgtgtccggcaccgggacac 21522849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 21533375 - 21533415
Alignment:
Q  41 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacac 81  Q
    ||||||||||| ||| ||||||||||||| |||||||||||    
T  21533375 gtgtcggtgtcggacacgacacgtgtccggcaccgggacac 21533415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 41091298 - 41091258
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtc 51  Q
    |||| ||||||||||||||||||||| ||||||||| ||||    
T  41091298 agaaaatcacataattcagtgtaattatatgtgtcgatgtc 41091258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 42029770 - 42029826
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtc 67  Q
    |||| ||||||||||||| ||||||| ||||| |||||||| ||| |||||| ||||    
T  42029770 agaaaatcacataattcaatgtaattatatgtatcggtgtcggacacgacacatgtc 42029826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 498 - 403
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcata 111  Q
    |||||| ||||||||||||||  | ||||||||||| ||| |||| ||||||||||||||||||||| |||||| ||| ||||| |||||||||||    
T  498 atcacaaaattcagtgtaattacaagtgtcggtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 3e-20; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 110
Target Start/End: Complemental strand, 2438755 - 2438661
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 110  Q
    |||||||||||||||||||||  | ||||||||||| ||| |||||| ||||||||||||||||||  |||||| ||| ||||| ||||||||||    
T  2438755 atcacataattcagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 2438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 18841046 - 18840953
Alignment:
Q  19 acataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||||||| |||||||||  | ||||||||||| ||| |||||| ||||||||||||||||||| |||||| ||| ||||| ||||||||||||    
T  18841046 acataattaagtgtaattacaagtgtcggtgtcagacacgacacatgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 18840953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 111
Target Start/End: Original strand, 28596492 - 28596587
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcata 111  Q
    ||||||||| ||||||||||| || ||||||||||| ||| |||||||||||||||||  ||||||  |||||| ||| ||||| |||||||||||    
T  28596492 atcacataagtcagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacactcggacactcctaatccgaggagtgtccgtgcttcata 28596587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 30404886 - 30404790
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||||||||||||||||||||  | ||||||| ||| ||| |||||| ||||||||||| |||||   ||||||||||||| ||| |||||||||||    
T  30404886 atcacataattcagtgtaattacaagtgtcggcgtcggacacgacacatgtccgacaccaggacatgcctaatctgagaagcgtttgtgcttcatag 30404790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 113
Target Start/End: Original strand, 15972903 - 15972993
Alignment:
Q  23 aattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatagg 113  Q
    ||||||||||||||  | ||||||||||| ||| ||||||||||||||| |||||||||| |||||| ||  | ||| |||||||||||||    
T  15972903 aattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacgccgggacacacctaatccgaagaatgtccgtgcttcatagg 15972993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 5367215 - 5367280
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacac 81  Q
    ||||||||||||||||||||| |||||||||||||| ||| |||||| | |||||| |||||||||    
T  5367215 atcacataattcagtgtaattatatgtgtcggtgtcggacacgacacatatccgactccgggacac 5367280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 37559000 - 37559096
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||||||||||| |||||||  | ||||||||||| |||  ||||||||||||||||||| ||||   ||||| ||| ||||| ||||||||||||    
T  37559000 atcacataattcaatgtaattacaagtgtcggtgtcggacttgacacgtgtccgacaccggtacacgcttaatccgaggagtgtccgtgcttcatag 37559096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 20242768 - 20242706
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacac 73  Q
    |||| ||||||||||||||||||||| |||||||||||||| ||| | ||||||||| |||||    
T  20242768 agaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacaacacgtgtctgacac 20242706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 34994015 - 34993921
Alignment:
Q  19 acataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatagg 113  Q
    |||||||||| ||||||| |||||||| |||||  || ||||| ||||||||||| |||||||  |||||   || |||||||||||||||||||    
T  34994015 acataattcaatgtaattatatgtgtcagtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgcttcatagg 34993921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 37419802 - 37419875
Alignment:
Q  41 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 114  Q
    ||||||||||| ||| |||  ||||||||||||||||||||  |||||| ||| ||||| ||||||||||||||    
T  37419802 gtgtcggtgtcggacacgatgcgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcataggt 37419875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 38117195 - 38117099
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||||||| ||| ||||||||  | |||| |||||| ||| | |||||||||||||||||||||||  |||||| |||  |||| ||||||||||||    
T  38117195 atcacatacttcggtgtaattacaagtgttggtgtcggacacaacacgtgtccgacaccgggacacgcctaatccgaggggtgtccgtgcttcatag 38117099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 112
Target Start/End: Original strand, 35056927 - 35056998
Alignment:
Q  41 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||||||||| ||| ||||||||||||||||| |  ||||  |||||||||| ||||| ||||||||||||    
T  35056927 gtgtcggtgtcggacacgacacgtgtccgacacggaaacacgcctaatctgaggagtgtccgtgcttcatag 35056998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 112
Target Start/End: Original strand, 26769571 - 26769641
Alignment:
Q  42 tgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||||| || ||| ||||||||||||||||| |||||||  |||||| ||| ||||| ||||||||||||    
T  26769571 tgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttcatag 26769641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 29176528 - 29176442
Alignment:
Q  17 tcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgt 103  Q
    |||||||||||||||||||| || |||| |||||  ||| || ||| |||||||||| | |||||| ||||||  ||||||||||||    
T  29176528 tcacataattcagtgtaattataagtgttggtgttggacacggcacatgtccgacactgagacacacctaatccaagaagtgttcgt 29176442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 81
Target Start/End: Complemental strand, 37411285 - 37411215
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacac 81  Q
    |||| ||||||||||||||||| ||| ||||||||| ||||  || |||| |||||||||||| |||||||    
T  37411285 agaaaatcacataattcagtgtgattatatgtgtcgatgtcgaacacgacgcgtgtccgacactgggacac 37411215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 5040757 - 5040822
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacac 81  Q
    ||||||||||||| |||||||  | ||||||||||| ||| ||||| ||||||||| |||||||||    
T  5040757 atcacataattcaatgtaattacaagtgtcggtgtcggacacgacatgtgtccgacgccgggacac 5040822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 112
Target Start/End: Original strand, 24009314 - 24009414
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 110  Q
    |||| |||||| ||| |||||||| | |||||||||||||| ||| ||||||||||| ||||| |||||||  || |||  || ||||| ||||||||||    
T  24009314 agaaaatcacaaaatgcagtgtaaat-tatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 24009412  T
Q  111 ag 112  Q
    ||    
T  24009413 ag 24009414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 31808100 - 31808173
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatc 89  Q
    ||||||||||||||||||||| |||||||| ||||   || |||||| ||| ||||||| ||||||| ||||||    
T  31808100 atcacataattcagtgtaattatatgtgtcagtgttgaacacgacacatgttcgacacctggacacacctaatc 31808173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 112
Target Start/End: Complemental strand, 42511375 - 42511322
Alignment:
Q  59 acacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||||||||||||| ||||||| ||||||| ||| ||||| ||||||||||||    
T  42511375 acacgtgtccgacacagggacacggctaatccgaggagtgtccgtgcttcatag 42511322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 112
Target Start/End: Complemental strand, 21782816 - 21782744
Alignment:
Q  40 tgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||| |||||| | | |||||||||||| ||||||||||||  |||||||| | ||||| ||||||||||||    
T  21782816 tgtgttggtgtcaggcacgacacgtgtccaacaccgggacacgtctaatctgtggagtgtccgtgcttcatag 21782744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 111
Target Start/End: Complemental strand, 5891785 - 5891715
Alignment:
Q  41 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcata 111  Q
    |||||||||| |||| ||||||||||| |||| || |||||  ||||| | ||||||||||||| ||||||    
T  5891785 gtgtcggtgtttgacacgacacgtgtcagacatcgagacacgtctaatttaagaagtgttcgtgtttcata 5891715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 112
Target Start/End: Complemental strand, 11223858 - 11223793
Alignment:
Q  46 ggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||||| ||| |||||| |||| |||||||||||||  |||||||||| ||||| ||||||||||||    
T  11223858 ggtgtcggacacgacac-tgtctgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 11223793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 112
Target Start/End: Original strand, 19980740 - 19980794
Alignment:
Q  58 gacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||| ||||||||| || |||||| |||||| ||||||||||| ||||||||||    
T  19980740 gacacatgtccgacatcgagacacacctaatccgagaagtgttcatgcttcatag 19980794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 41843464 - 41843534
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgt-----ctgacgcgacacgtgtccgacaccgggacac 81  Q
    |||||||||||| || ||||| |||||||||||||     | ||||||||||||||||||||| |||||||    
T  41843464 atcacataattcggtataattatatgtgtcggtgttgtgtcggacgcgacacgtgtccgacacggggacac 41843534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 18889632 - 18889591
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtct 52  Q
    |||| ||||||||||||||||||||  |||||||||||||||    
T  18889632 agaaaatcacataattcagtgtaatcatatgtgtcggtgtct 18889591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 112
Target Start/End: Complemental strand, 24975304 - 24975255
Alignment:
Q  63 gtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||||||||| |||||| | |||||||||| ||||| ||||||||||||    
T  24975304 gtgtccgacactgggacaaatctaatctgaggagtgtccgtgcttcatag 24975255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 23718050 - 23718082
Alignment:
Q  17 tcacataattcagtgtaattctatgtgtcggtg 49  Q
    |||||||||||||||||||| ||||||||||||    
T  23718050 tcacataattcagtgtaattatatgtgtcggtg 23718082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 24105722 - 24105754
Alignment:
Q  17 tcacataattcagtgtaattctatgtgtcggtg 49  Q
    |||||||||||||||||||| ||||||||||||    
T  24105722 tcacataattcagtgtaattatatgtgtcggtg 24105754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 34785023 - 34784983
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtc 51  Q
    |||| ||||||||||| ||||||||| ||||||||||||||    
T  34785023 agaaaatcacataatttagtgtaattatatgtgtcggtgtc 34784983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 114
Target Start/End: Original strand, 37497150 - 37497242
Alignment:
Q  23 aattcagtgtaattctatgtgtcggtgtctgacgc-gacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 114  Q
    |||||| ||||||  ||| |||||||||| ||| | ||||| ||| || ||||||||||  |||||||  |||||||| ||||||||||||||    
T  37497150 aattcaatgtaataatatctgtcggtgtcagacaccgacacatgttcggcaccgggacatggctaatcccagaagtgtccgtgcttcataggt 37497242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 38355928 - 38355888
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtc 51  Q
    |||| ||||||||||||||||| ||| ||||||||||||||    
T  38355928 agaaaatcacataattcagtgtgattatatgtgtcggtgtc 38355888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 44860338 - 44860378
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtc 51  Q
    |||| ||| ||||||||||||||||| ||||||||||||||    
T  44860338 agaaaatcgcataattcagtgtaattatatgtgtcggtgtc 44860378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 3025569 - 3025668
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 110  Q
    |||| ||||||||||||||||||||| || ||||| ||||| ||| ||||||||||| ||||| | ||||| ||||||| ||| ||||| ||||||||||    
T  3025569 agaaaatcacataattcagtgtaattataggtgtcagtgtcggacacgacacgtgtctgacactgtgacacggctaatccgaggagtgtccgtgcttcat 3025668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 81
Target Start/End: Complemental strand, 20679436 - 20679366
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacac 81  Q
    |||| |||||||| |||||||||||| || ||||||||||| ||||| |||||||||||||||||||||||    
T  20679436 agaaaatcacatagttcagtgtaattataagtgtcggtgtcagacgcaacacgtgtccgacaccgggacac 20679366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 29510304 - 29510231
Alignment:
Q  41 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 114  Q
    ||||||||||| ||| |||| ||||||||||||||||||||| |||||| ||| ||||| ||||||||||||||    
T  29510304 gtgtcggtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcataggt 29510231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 926815 - 926760
Alignment:
Q  25 ttcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggaca 80  Q
    |||||||||||| || ||||||||||| ||||||||||||||||||||||||||||    
T  926815 ttcagtgtaattataagtgtcggtgtcggacgcgacacgtgtccgacaccgggaca 926760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 112
Target Start/End: Original strand, 14134717 - 14134818
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 110  Q
    |||| ||||||||||||||||||||| ||| ||||||||||  || ||||||||||||| |||| ||||||  |||||  ||| ||||| |||| |||||    
T  14134717 agaaaatcacataattcagtgtaattatatatgtcggtgtcaaacacgacacgtgtccgtcaccaggacacgcctaattcgaggagtgtccgtgtttcat 14134816  T
Q  111 ag 112  Q
    ||    
T  14134817 ag 14134818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 112
Target Start/End: Original strand, 22652035 - 22652106
Alignment:
Q  41 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||||||||| ||| ||||| |||||||||||||||||||  |||||| ||| ||||| ||||||||||||    
T  22652035 gtgtcggtgtcggacacgacatgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 22652106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 33405418 - 33405347
Alignment:
Q  18 cacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatc 89  Q
    ||||||||| ||||||||| |||||||||||||| ||| |||||| |||| |||||| |||||| |||||||    
T  33405418 cacataatttagtgtaattatatgtgtcggtgtcggacacgacacatgtctgacacctggacacggctaatc 33405347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 40332209 - 40332312
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 110  Q
    |||| |||||||||||||||||||||  | ||||||||||  ||| |||||||||||| |||||||||| |  |||||| ||| ||||| |||| ||||     
T  40332209 agaaaatcacataattcagtgtaattacaagtgtcggtgtgggacacgacacgtgtcccacaccgggacgcgcctaatccgaggagtgtccgtgtttcac 40332308  T
Q  111 aggt 114  Q
    ||||    
T  40332309 aggt 40332312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 108
Target Start/End: Complemental strand, 31580169 - 31580071
Alignment:
Q  10 aagaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttc 108  Q
    ||||| ||||||||||| ||||||||| || |||||| |||| |||||||||| ||| ||||||||  ||||| |||||| |||  |||||| ||||||    
T  31580169 aagaaaatcacataattgagtgtaattataggtgtcgatgtcggacgcgacacatgttcgacaccgaaacacacctaatccgaggggtgttcatgcttc 31580071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 5813640 - 5813713
Alignment:
Q  41 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 114  Q
    ||||||||||| ||| |||||||||||||||||||||||||  |||||  ||| ||||| |||||||| |||||    
T  5813640 gtgtcggtgtcggacacgacacgtgtccgacaccgggacacgcctaattggaggagtgtccgtgcttcgtaggt 5813713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 24413592 - 24413499
Alignment:
Q  19 acataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||||||||| |||||| || ||||| ||||| ||| |||  ||||||| ||| ||||||||  |||||| ||||||||| ||||||||||||    
T  24413592 acataattcagggtaattataagtgtcagtgtcggacacgatgcgtgtccaacagcgggacacgtctaatccgagaagtgtccgtgcttcatag 24413499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 36450790 - 36450694
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||||| ||||||||||||||  | |||| |||||| ||| |||| ||||||||||||| ||||||  |||||| ||| |||||  |||||||||||    
T  36450790 atcacagaattcagtgtaattacaagtgtaggtgtcggacacgacgcgtgtccgacaccaggacacgcctaatccgaggagtgtctgtgcttcatag 36450694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 38079016 - 38079112
Alignment:
Q  10 aagaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgct 106  Q
    ||||| ||||||| ||||||||||||| |||| |||| |||| ||| |||| | |||||||||||||| |||   |||||||| |||||| ||||||    
T  38079016 aagaaaatcacatgattcagtgtaattatatgcgtcgatgtcggacacgacgcatgtccgacaccgggccacgtataatctgaaaagtgtccgtgct 38079112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 112
Target Start/End: Complemental strand, 15816129 - 15816058
Alignment:
Q  41 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||| |||||| ||| |||||||  ||||||||||||||||  |||||| ||||||||| ||||||||||||    
T  15816129 gtgttggtgtcggacacgacacgaatccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 15816058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 114
Target Start/End: Original strand, 27213595 - 27213646
Alignment:
Q  63 gtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 114  Q
    ||||| ||||||||||||| ||||||| ||||||||| ||||||||||||||    
T  27213595 gtgtcggacaccgggacacggctaatccgagaagtgtccgtgcttcataggt 27213646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 112
Target Start/End: Original strand, 29447503 - 29447574
Alignment:
Q  41 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||||||||| ||| ||||| ||||||||||||||||||   |||||| ||| ||||| ||||||||||||    
T  29447503 gtgtcggtgtcagacacgacatgtgtccgacaccgggacaggtctaatcggaggagtgtccgtgcttcatag 29447574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 126369 - 126295
Alignment:
Q  30 tgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtg 104  Q
    ||||||| |||||||| ||||| ||| |||||||||||| | |||||||||| ||||||| ||| ||||| ||||    
T  126369 tgtaattatatgtgtcagtgtcggacacgacacgtgtccaataccgggacacggctaatccgaggagtgtccgtg 126295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 18407742 - 18407840
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 114  Q
    |||||||||||||||||||||  | |||||| || | ||| |||||| ||||||||||  ||||||  |||||  ||| ||||| ||||||||||||||    
T  18407742 atcacataattcagtgtaattacaagtgtcgctgccggacacgacacatgtccgacactaggacacgcctaattggaggagtgtccgtgcttcataggt 18407840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 4786380 - 4786339
Alignment:
Q  10 aagaatatcacataattcagtgtaattctatgtgtcggtgtc 51  Q
    ||||| ||||||||||||||||||||| ||||||||||||||    
T  4786380 aagaaaatcacataattcagtgtaattatatgtgtcggtgtc 4786339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 31557019 - 31557084
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacac 81  Q
    |||||||||||||||||||||  | || |||||||| ||| |||||| ||||||||||| ||||||    
T  31557019 atcacataattcagtgtaattacaagtttcggtgtcagacacgacacatgtccgacaccaggacac 31557084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 3951572 - 3951476
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||||| ||| ||||||| || |||||||||||||| ||| ||||||||||| ||||| || ||||  ||||||  || ||| | ||||||||||||    
T  3951572 atcacaaaatgcagtgtacttatatgtgtcggtgtcagacacgacacgtgtctgacacgggaacacgcctaatccaaggagtttccgtgcttcatag 3951476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 26902216 - 26902176
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtc 51  Q
    |||| ||||||||||||||||||||| ||||||||||||||    
T  26902216 agaaaatcacataattcagtgtaattatatgtgtcggtgtc 26902176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 37283851 - 37283755
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 110  Q
    |||| ||||||||||||||||||||  |||||||||||||  ||| |||||||||||    ||||||||||  |||||| ||| ||||  ||||||||||    
T  37283851 agaaaatcacataattcagtgtaat--tatgtgtcggtgtgggacacgacacgtgtc---taccgggacacgtctaatccgaggagtgcccgtgcttcat 37283757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 114
Target Start/End: Complemental strand, 949278 - 949203
Alignment:
Q  39 atgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 114  Q
    ||||||||||| | ||  |||||| | |||||||||| |||||  |||||||||| | ||||||||||||||||||    
T  949278 atgtgtcggtgccggatacgacacatatccgacaccgagacactcctaatctgaggaatgttcgtgcttcataggt 949203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 8293848 - 8293931
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgt 99  Q
    ||||| ||||||||||||||| ||||||||||||||  ||  ||||| | || |||||| ||||||| |||||| ||| |||||    
T  8293848 atcacgtaattcagtgtaattatatgtgtcggtgtcaaacatgacacatatctgacacctggacacacctaatccgaggagtgt 8293931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 8847279 - 8847314
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtc 51  Q
    ||||||||||||||||||||| ||||||||||||||    
T  8847279 atcacataattcagtgtaattatatgtgtcggtgtc 8847314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 11927122 - 11927087
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtc 51  Q
    ||||||||||||||||||||| ||||||||||||||    
T  11927122 atcacataattcagtgtaattatatgtgtcggtgtc 11927087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 43737847 - 43737752
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcata 111  Q
    |||||| ||| |||||||||| |||||||||||||| ||| ||||| ||||| ||||| |||| ||  || |||  || ||||| |||||||||||    
T  43737847 atcacaaaatacagtgtaattatatgtgtcggtgtcggacacgacaggtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcata 43737752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 113
Target Start/End: Original strand, 8343381 - 8343447
Alignment:
Q  47 gtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatagg 113  Q
    ||||| ||| |||||||||||||||||||||||||  |||||| ||  |||||  ||||||||||||    
T  8343381 gtgtccgacacgacacgtgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcatagg 8343447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 9414911 - 9414857
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccga 70  Q
    |||||||||||||||| |||| || |||| |||||| ||| ||||||||||||||    
T  9414911 atcacataattcagtgcaattataagtgttggtgtcagacacgacacgtgtccga 9414857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 22596020 - 22596070
Alignment:
Q  19 acataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccg 69  Q
    ||||||||||||||||||  | |||| |||||| |||||||||||||||||    
T  22596020 acataattcagtgtaattacaagtgttggtgtcggacgcgacacgtgtccg 22596070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 20873092 - 20873157
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacac 81  Q
    ||||||||||| |||||||||  | ||||||||||| ||| ||| |||||||||| |||| |||||    
T  20873092 atcacataatttagtgtaattacaagtgtcggtgtcggacacgatacgtgtccgataccgagacac 20873157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 112
Target Start/End: Original strand, 40064032 - 40064081
Alignment:
Q  63 gtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||||||||||||||||||| |||||| ||| ||||| |||||| |||||    
T  40064032 gtgtccgacaccgggacacatctaatccgaggagtgtccgtgctacatag 40064081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 11803276 - 11803316
Alignment:
Q  10 aagaatatcacataattcagtgtaattctatgtgtcggtgt 50  Q
    ||||| ||||||||||||||||||||| ||||||| |||||    
T  11803276 aagaaaatcacataattcagtgtaattatatgtgttggtgt 11803316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 13844637 - 13844597
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtc 51  Q
    |||| ||||||||||| ||||||||| ||||||||||||||    
T  13844637 agaaaatcacataattgagtgtaattatatgtgtcggtgtc 13844597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 22197725 - 22197669
Alignment:
Q  58 gacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 114  Q
    |||||||||||||||||||  |||  |||||||||| ||||| ||||||| ||||||    
T  22197725 gacacgtgtccgacaccggatcacgcctaatctgaggagtgtccgtgctttataggt 22197669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 34897103 - 34897143
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtc 51  Q
    |||| ||||||||||||||||||||| ||||||||| ||||    
T  34897103 agaaaatcacataattcagtgtaattatatgtgtcgatgtc 34897143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 70304 - 70394
Alignment:
Q  19 acataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttca 109  Q
    |||||||||||||||||| || ||||||||||| ||| |||||||||||||||||| |||||   |||||| ||  |||||||||||||||    
T  70304 acataattcagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacaccaggacatgcctaatccgatgagtgttcgtgcttca 70394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 112
Target Start/End: Original strand, 241653 - 241724
Alignment:
Q  41 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||| |||||| ||| |||||||||||||||||||||||||  |||||| ||||||||| ||||||||||||    
T  241653 gtgttggtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 241724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 236964 - 236912
Alignment:
Q  62 cgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 114  Q
    |||||| |||||||||||||| |||||||||| |||||  |||||||||||||    
T  236964 cgtgtctgacaccgggacacacctaatctgaggagtgtctgtgcttcataggt 236912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 8833 - 8917
Alignment:
Q  28 agtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||||||||  | ||||||||||| ||| ||||||||||||||||||| |||||  |||||||||| ||| | ||||||||||||    
T  8833 agtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggagtctccgtgcttcatag 8917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 71784 - 71857
Alignment:
Q  41 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcataggt 114  Q
    ||||||||||| ||| | |||||||||||||||||||||||  |||||| ||| |||||  |||||||||||||    
T  71784 gtgtcggtgtcggacacaacacgtgtccgacaccgggacacgactaatccgaggagtgtcggtgcttcataggt 71857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 4919 - 4821
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctg--acgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||||||||||||||||||||  | |||| |||||||   || |||||| |||||||||| |||||||  |||||| ||| ||||| ||||||||||||    
T  4919 atcacataattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 4821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 14553 - 14646
Alignment:
Q  16 atcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    |||||||||||||||||||||  | |||   ||||| ||| ||||||||||||||||||| |||||  ||||||  || ||||| ||||||||||||    
T  14553 atcacataattcagtgtaattacaagtg---gtgtcggacacgacacgtgtccgacaccgagacacgcctaatcgaaggagtgtacgtgcttcatag 14646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 45563 - 45502
Alignment:
Q  19 acataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggaca 80  Q
    ||||||||||||||||||  | ||||||||||| ||| ||||||||||| ||||||| ||||    
T  45563 acataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtctgacaccgcgaca 45502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 112
Target Start/End: Complemental strand, 44525 - 44454
Alignment:
Q  41 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcatag 112  Q
    ||||||||||  ||| | ||||||||||||||| ||||||  | |||||||||||||||  |||||||||||    
T  44525 gtgtcggtgttggacacaacacgtgtccgacactgggacatggttaatctgagaagtgtctgtgcttcatag 44454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 48
Target Start/End: Complemental strand, 44566 - 44529
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggt 48  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  44566 agaaaatcacataattcagtgtaattatatgtgtcggt 44529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 90861 - 90924
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacacc 74  Q
    |||| |||| |||||||||||||||| ||| ||||| |||| ||| | ||||||||||||||||    
T  90861 agaaaatcatataattcagtgtaattatatatgtcgatgtcagacacaacacgtgtccgacacc 90924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 135353 - 135263
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtctgacgcgacacgtgtccgacaccgggacacagctaatctgagaagtgttcgtgcttcat 110  Q
    |||| |||||||||||| |||||||| ||||||||||||||           |||||||||||| ||||||  ||||||||||  |||||||||||||||    
T  135353 agaaaatcacataattctgtgtaattatatgtgtcggtgtc-----------gtgtccgacaccaggacacgcctaatctgaggcgtgttcgtgcttcat 135265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 53239 - 53279
Alignment:
Q  41 gtgtcggtgtctgacgcgacacgtgtccgacaccgggacac 81  Q
    ||||||||||| |||  ||||||||||||||||||||||||    
T  53239 gtgtcggtgtcggacatgacacgtgtccgacaccgggacac 53279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 9788 - 9748
Alignment:
Q  11 agaatatcacataattcagtgtaattctatgtgtcggtgtc 51  Q
    |||| ||||| ||||||||||||||| ||||||||||||||    
T  9788 agaaaatcacttaattcagtgtaattatatgtgtcggtgtc 9748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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