View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0043_low_12 (Length: 314)
Name: NF0043_low_12
Description: NF0043
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0043_low_12 |
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Alignment Details
Target: chr8 (Bit Score: 173; Significance: 5e-93; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 13907976 - 13908195
Alignment:
| Q |
1 |
aaaatatgcatatgtgtatgttatatatgtgaacacttacatggcttaaacggatatgaagtggattaggtttgaagaatcacgaaatatgacaaaac-- |
98 |
Q |
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| T |
13907976 |
aaaatatgcatatgtgtatgttatatatgtgaacagtgacatgacttaaacggatatgaagtggattagatttgaagaatcacgaaatatgacaaaacac |
13908075 |
T |
|
| Q |
99 |
tggaagaaaattctatggtgcagaaatttgtggtaagttaatgtgttttaagtttctaaagtcaaatgttttttaactgtatgttccttgatgtaatttg |
198 |
Q |
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||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
13908076 |
tggaagaaaattctagggtgtagaaatttgtggtaagttaatgtgttttaagtttctaaagtcaaatgttttttgactgtatgttccttgatgtaatttg |
13908175 |
T |
|
| Q |
199 |
tgtgaatctgcagtgcccta |
218 |
Q |
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||||||| || ||||||||| |
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| T |
13908176 |
tgtgaatatgtagtgcccta |
13908195 |
T |
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