View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0043_low_5 (Length: 411)
Name: NF0043_low_5
Description: NF0043
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0043_low_5 |
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Alignment Details
Target: chr3 (Bit Score: 184; Significance: 2e-99; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 25191655 - 25191854
Alignment:
| Q |
1 |
gttgttgtcgtctttgtcactaaccctaaaagcgcttgatagcgagataatttaatattttattttaagtaaattttactatataagtacataaataatt |
100 |
Q |
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| T |
25191655 |
gttgtcgttgtctttgtcactaaccctaaaagcgcttgatagcgagataatttaatatttgattttaagtaaattttactatataagtacataaataatt |
25191754 |
T |
|
| Q |
101 |
atcctaaaaaacagtacatagatagattctcgtacttaccctttgagcaaagacaacaacaacaaaaaagagttaccctttgagcacaacaaaattacaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
25191755 |
atcctaaaaaacagtacatagatagattctcgtacttaccctttgagcaaagacaacaacaacaaaaaagagttaccctttgagcacaccaaaattacaa |
25191854 |
T |
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