View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0050_high_2 (Length: 271)

Name: NF0050_high_2
Description: NF0050
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0050_high_2
NF0050_high_2
[»] chr7 (52 HSPs)
chr7 (194-256)||(32758228-32758290)
chr7 (195-256)||(11617695-11617756)
chr7 (194-256)||(47077959-47078021)
chr7 (194-256)||(10693177-10693239)
chr7 (194-256)||(19426995-19427057)
chr7 (194-256)||(21172113-21172175)
chr7 (194-256)||(42495941-42496003)
chr7 (202-256)||(48735235-48735289)
chr7 (194-254)||(43557441-43557501)
chr7 (194-256)||(2541125-2541188)
chr7 (194-256)||(14732928-14732990)
chr7 (194-256)||(27629601-27629663)
chr7 (194-256)||(35334920-35334982)
chr7 (194-256)||(42798636-42798698)
chr7 (194-256)||(42805491-42805553)
chr7 (194-255)||(7794612-7794673)
chr7 (194-255)||(34626313-34626374)
chr7 (195-256)||(46354161-46354222)
chr7 (202-256)||(7193052-7193106)
chr7 (194-244)||(11741774-11741824)
chr7 (194-256)||(18327001-18327063)
chr7 (202-256)||(28362259-28362312)
chr7 (195-249)||(33872016-33872070)
chr7 (201-254)||(22699083-22699136)
chr7 (195-256)||(29140467-29140528)
chr7 (194-254)||(5180263-5180323)
chr7 (204-256)||(40463844-40463896)
chr7 (195-246)||(6736867-6736918)
chr7 (201-248)||(13805077-13805124)
chr7 (194-241)||(42391204-42391251)
chr7 (194-256)||(1424016-1424078)
chr7 (202-256)||(3469293-3469346)
chr7 (204-262)||(19265777-19265834)
chr7 (197-247)||(19266426-19266476)
chr7 (194-256)||(23419780-23419841)
chr7 (202-256)||(28078245-28078299)
chr7 (194-256)||(42476840-42476902)
chr7 (194-252)||(47716430-47716488)
chr7 (195-256)||(12473271-12473332)
chr7 (196-252)||(8149054-8149110)
chr7 (194-248)||(7644931-7644985)
chr7 (201-247)||(14099119-14099165)
chr7 (201-247)||(14409136-14409182)
chr7 (202-248)||(39123865-39123911)
chr7 (194-256)||(48123590-48123651)
chr7 (194-247)||(42101991-42102044)
chr7 (202-247)||(29907393-29907440)
chr7 (194-256)||(2663039-2663099)
chr7 (194-256)||(21447557-21447619)
chr7 (215-253)||(28685261-28685299)
chr7 (194-247)||(44123727-44123780)
chr7 (220-256)||(25198689-25198725)
[»] chr4 (56 HSPs)
chr4 (194-256)||(11054252-11054314)
chr4 (194-253)||(47528634-47528693)
chr4 (194-256)||(21646931-21646993)
chr4 (194-256)||(48598929-48598991)
chr4 (193-256)||(30639347-30639410)
chr4 (194-256)||(5306769-5306831)
chr4 (194-256)||(5648226-5648288)
chr4 (194-256)||(6430731-6430793)
chr4 (194-256)||(16408709-16408771)
chr4 (195-256)||(10660371-10660432)
chr4 (195-256)||(10874516-10874577)
chr4 (195-256)||(20224951-20225012)
chr4 (204-256)||(23501760-23501812)
chr4 (194-250)||(44363238-44363294)
chr4 (194-256)||(5313100-5313162)
chr4 (202-256)||(14590804-14590858)
chr4 (202-256)||(16911529-16911583)
chr4 (195-253)||(37494821-37494879)
chr4 (201-253)||(13256510-13256562)
chr4 (202-256)||(17315412-17315466)
chr4 (194-244)||(49938696-49938746)
chr4 (194-243)||(17043500-17043549)
chr4 (203-256)||(47441645-47441697)
chr4 (195-247)||(487242-487294)
chr4 (194-250)||(40915802-40915858)
chr4 (205-256)||(54966989-54967039)
chr4 (194-256)||(30352697-30352759)
chr4 (195-245)||(32478892-32478942)
chr4 (198-235)||(7038041-7038078)
chr4 (195-248)||(19027823-19027876)
chr4 (195-256)||(42164255-42164315)
chr4 (194-242)||(39077900-39077948)
chr4 (203-247)||(43035224-43035268)
chr4 (194-245)||(9832417-9832468)
chr4 (215-254)||(20405062-20405101)
chr4 (205-248)||(25343162-25343205)
chr4 (194-240)||(7385582-7385628)
chr4 (194-256)||(8473726-8473788)
chr4 (195-237)||(25463108-25463150)
chr4 (194-256)||(30496426-30496488)
chr4 (202-256)||(54730216-54730270)
chr4 (194-247)||(35567146-35567199)
chr4 (195-240)||(41018900-41018945)
chr4 (205-245)||(23580325-23580365)
chr4 (201-245)||(30690296-30690340)
chr4 (204-244)||(49938554-49938594)
chr4 (215-254)||(55766593-55766632)
chr4 (204-246)||(3580952-3580994)
chr4 (226-256)||(18969708-18969738)
chr4 (202-256)||(20373908-20373962)
chr4 (202-256)||(50856350-50856403)
chr4 (201-243)||(54175043-54175085)
chr4 (194-256)||(54640445-54640506)
chr4 (202-247)||(12257707-12257752)
chr4 (206-247)||(39029179-39029220)
chr4 (202-238)||(32629382-32629418)
[»] chr3 (38 HSPs)
chr3 (194-256)||(26869696-26869758)
chr3 (194-256)||(8247795-8247857)
chr3 (194-256)||(10870057-10870119)
chr3 (197-255)||(4495773-4495831)
chr3 (194-256)||(7696991-7697053)
chr3 (194-256)||(13730710-13730772)
chr3 (194-256)||(46421143-46421205)
chr3 (194-256)||(52926316-52926378)
chr3 (194-256)||(1217079-1217141)
chr3 (194-256)||(9607192-9607254)
chr3 (194-256)||(12914141-12914203)
chr3 (194-256)||(29366828-29366890)
chr3 (202-252)||(39203509-39203559)
chr3 (195-256)||(40272919-40272980)
chr3 (194-252)||(13628898-13628957)
chr3 (195-256)||(5173827-5173889)
chr3 (202-256)||(16735430-16735484)
chr3 (194-256)||(22123021-22123083)
chr3 (194-256)||(26573117-26573178)
chr3 (194-247)||(53062036-53062089)
chr3 (212-256)||(25517297-25517341)
chr3 (194-246)||(34420750-34420802)
chr3 (194-256)||(45620935-45620996)
chr3 (194-243)||(30928253-30928302)
chr3 (194-254)||(6411927-6411987)
chr3 (194-256)||(12525399-12525458)
chr3 (194-237)||(516417-516460)
chr3 (194-256)||(22609756-22609817)
chr3 (196-246)||(25944468-25944518)
chr3 (194-242)||(7942993-7943041)
chr3 (223-254)||(21875011-21875042)
chr3 (196-247)||(33075926-33075977)
chr3 (207-249)||(33235526-33235569)
chr3 (194-256)||(35417906-35417967)
chr3 (205-254)||(11461758-11461807)
chr3 (202-254)||(26782357-26782409)
chr3 (203-247)||(28904941-28904985)
chr3 (195-247)||(53996673-53996725)
[»] chr1 (59 HSPs)
chr1 (194-256)||(45812641-45812703)
chr1 (194-256)||(18944633-18944695)
chr1 (194-256)||(34725202-34725264)
chr1 (194-256)||(47214501-47214563)
chr1 (194-256)||(22930173-22930235)
chr1 (194-252)||(27474275-27474333)
chr1 (194-256)||(32632662-32632724)
chr1 (194-252)||(41319912-41319970)
chr1 (194-254)||(23768426-23768486)
chr1 (194-253)||(20004198-20004257)
chr1 (194-248)||(6983915-6983969)
chr1 (194-256)||(14617028-14617090)
chr1 (194-256)||(18724651-18724712)
chr1 (194-256)||(30395834-30395896)
chr1 (194-256)||(34714613-34714675)
chr1 (202-256)||(40424732-40424786)
chr1 (195-253)||(46991797-46991855)
chr1 (195-248)||(20036218-20036271)
chr1 (201-253)||(8197036-8197088)
chr1 (205-256)||(19932869-19932920)
chr1 (194-256)||(2435893-2435954)
chr1 (194-256)||(4430132-4430194)
chr1 (194-248)||(27201645-27201699)
chr1 (202-256)||(38478394-38478448)
chr1 (194-252)||(46248059-46248117)
chr1 (201-250)||(6925096-6925145)
chr1 (207-256)||(18742080-18742129)
chr1 (195-256)||(25290153-25290214)
chr1 (194-247)||(50760332-50760385)
chr1 (194-247)||(52910216-52910269)
chr1 (195-247)||(2436000-2436052)
chr1 (194-256)||(10668210-10668277)
chr1 (194-253)||(14988025-14988084)
chr1 (195-256)||(9939450-9939512)
chr1 (202-248)||(19414437-19414483)
chr1 (194-256)||(33222974-33223036)
chr1 (201-247)||(35117881-35117927)
chr1 (194-256)||(45402085-45402146)
chr1 (194-255)||(22151495-22151556)
chr1 (195-244)||(22327101-22327150)
chr1 (195-256)||(35019221-35019281)
chr1 (197-256)||(18335955-18336014)
chr1 (195-246)||(25468370-25468421)
chr1 (201-247)||(10378838-10378884)
chr1 (194-256)||(12126941-12127003)
chr1 (194-256)||(18335394-18335456)
chr1 (205-254)||(21006136-21006185)
chr1 (195-236)||(31272481-31272522)
chr1 (195-256)||(49546014-49546074)
chr1 (194-246)||(19701570-19701622)
chr1 (195-246)||(44485216-44485267)
chr1 (202-256)||(11596504-11596557)
chr1 (194-252)||(21723658-21723715)
chr1 (194-236)||(43768168-43768210)
chr1 (194-256)||(50811930-50811991)
chr1 (195-256)||(10163749-10163810)
chr1 (202-247)||(17470460-17470505)
chr1 (196-248)||(15511259-15511311)
chr1 (194-230)||(35005139-35005175)
[»] scaffold0168 (1 HSPs)
scaffold0168 (194-256)||(30546-30608)
[»] chr8 (37 HSPs)
chr8 (194-256)||(12670354-12670416)
chr8 (194-256)||(20869602-20869664)
chr8 (194-256)||(30454201-30454263)
chr8 (194-256)||(17823543-17823605)
chr8 (194-256)||(28407383-28407445)
chr8 (194-256)||(39461102-39461164)
chr8 (196-253)||(24245421-24245478)
chr8 (194-254)||(20284179-20284239)
chr8 (194-254)||(21070808-21070868)
chr8 (194-253)||(28817732-28817791)
chr8 (194-256)||(2626486-2626548)
chr8 (202-256)||(13160669-13160723)
chr8 (194-256)||(18164865-18164927)
chr8 (194-252)||(25250493-25250551)
chr8 (194-256)||(35261646-35261708)
chr8 (194-256)||(36720763-36720825)
chr8 (195-256)||(7136636-7136697)
chr8 (194-256)||(6760789-6760851)
chr8 (194-256)||(29521791-29521853)
chr8 (194-256)||(42083805-42083866)
chr8 (195-252)||(8897871-8897928)
chr8 (195-256)||(31454155-31454216)
chr8 (195-256)||(44530116-44530177)
chr8 (195-256)||(44781613-44781673)
chr8 (194-250)||(45071238-45071294)
chr8 (194-253)||(11748269-11748328)
chr8 (194-248)||(26954107-26954161)
chr8 (195-241)||(31457155-31457201)
chr8 (195-244)||(35105902-35105951)
chr8 (195-247)||(11001057-11001109)
chr8 (195-247)||(22598133-22598185)
chr8 (195-254)||(12625858-12625917)
chr8 (194-244)||(30962879-30962929)
chr8 (227-256)||(40605044-40605073)
chr8 (226-254)||(23286431-23286459)
chr8 (206-246)||(24365178-24365218)
chr8 (194-254)||(40607830-40607890)
[»] chr6 (30 HSPs)
chr6 (194-256)||(1346931-1346993)
chr6 (194-256)||(1354861-1354923)
chr6 (193-256)||(3815182-3815245)
chr6 (194-256)||(12222023-12222085)
chr6 (194-247)||(9161099-9161152)
chr6 (195-255)||(2166519-2166579)
chr6 (195-255)||(2178152-2178212)
chr6 (196-256)||(8409210-8409270)
chr6 (196-256)||(13905087-13905146)
chr6 (201-253)||(14553482-14553533)
chr6 (205-256)||(20400634-20400685)
chr6 (194-256)||(14975186-14975248)
chr6 (202-256)||(24734600-24734654)
chr6 (202-256)||(33922942-33922996)
chr6 (194-247)||(12889402-12889455)
chr6 (194-252)||(29355963-29356022)
chr6 (205-246)||(32728273-32728314)
chr6 (195-247)||(2755531-2755583)
chr6 (194-253)||(8417442-8417501)
chr6 (202-253)||(12063437-12063488)
chr6 (194-252)||(15866143-15866201)
chr6 (215-256)||(19649294-19649335)
chr6 (202-254)||(6024202-6024254)
chr6 (195-231)||(17432332-17432368)
chr6 (194-237)||(23240928-23240971)
chr6 (194-251)||(27855544-27855601)
chr6 (204-245)||(32068074-32068115)
chr6 (217-253)||(1941825-1941861)
chr6 (195-255)||(22967139-22967199)
chr6 (195-255)||(23821194-23821254)
[»] chr5 (36 HSPs)
chr5 (194-256)||(38879548-38879610)
chr5 (194-256)||(43334169-43334231)
chr5 (194-254)||(27328721-27328781)
chr5 (194-253)||(37024660-37024719)
chr5 (194-256)||(8170088-8170150)
chr5 (194-256)||(24448857-24448919)
chr5 (194-256)||(35710280-35710342)
chr5 (194-256)||(41014286-41014348)
chr5 (195-256)||(1565398-1565459)
chr5 (201-256)||(4619219-4619274)
chr5 (194-256)||(22187252-22187314)
chr5 (195-256)||(23974748-23974808)
chr5 (195-256)||(30006292-30006353)
chr5 (201-247)||(209040-209086)
chr5 (202-252)||(22861780-22861830)
chr5 (195-251)||(22600426-22600482)
chr5 (204-256)||(39079882-39079933)
chr5 (204-256)||(39301091-39301142)
chr5 (202-253)||(31299602-31299653)
chr5 (194-256)||(17419881-17419943)
chr5 (194-236)||(32703411-32703453)
chr5 (215-256)||(12006457-12006498)
chr5 (197-246)||(31694217-31694266)
chr5 (203-239)||(1850624-1850660)
chr5 (195-247)||(28516541-28516593)
chr5 (215-256)||(2838745-2838787)
chr5 (194-240)||(9794465-9794511)
chr5 (202-256)||(10634260-10634313)
chr5 (195-240)||(1405170-1405215)
chr5 (195-248)||(19143049-19143102)
chr5 (215-256)||(19438716-19438757)
chr5 (216-245)||(28208235-28208264)
chr5 (207-248)||(31362454-31362495)
chr5 (202-243)||(34074676-34074717)
chr5 (194-246)||(3771318-3771370)
chr5 (195-231)||(42924941-42924977)
[»] chr2 (44 HSPs)
chr2 (194-256)||(12024024-12024086)
chr2 (194-256)||(14530285-14530347)
chr2 (194-256)||(8455422-8455484)
chr2 (193-255)||(26684727-26684789)
chr2 (196-256)||(10543665-10543725)
chr2 (201-256)||(21779372-21779427)
chr2 (194-253)||(23397736-23397795)
chr2 (194-253)||(24200731-24200790)
chr2 (194-256)||(11514403-11514465)
chr2 (203-256)||(27573588-27573641)
chr2 (204-256)||(25079834-25079886)
chr2 (195-251)||(44604826-44604882)
chr2 (201-252)||(17667973-17668024)
chr2 (194-252)||(7214505-7214563)
chr2 (194-252)||(22371028-22371086)
chr2 (194-256)||(25249843-25249905)
chr2 (196-253)||(17705465-17705522)
chr2 (202-254)||(17896228-17896280)
chr2 (194-256)||(35017785-35017847)
chr2 (195-245)||(5450263-5450313)
chr2 (194-256)||(14544030-14544092)
chr2 (202-252)||(17623535-17623585)
chr2 (194-256)||(19977820-19977882)
chr2 (195-256)||(39914413-39914474)
chr2 (195-248)||(40416978-40417031)
chr2 (202-246)||(99377-99421)
chr2 (194-238)||(25641487-25641531)
chr2 (220-256)||(27466262-27466298)
chr2 (202-245)||(5841006-5841049)
chr2 (194-256)||(9671147-9671210)
chr2 (193-247)||(23145803-23145857)
chr2 (193-247)||(23557593-23557647)
chr2 (195-256)||(24860093-24860154)
chr2 (223-256)||(39189556-39189589)
chr2 (195-243)||(17380343-17380391)
chr2 (195-247)||(29419996-29420048)
chr2 (203-247)||(33795261-33795305)
chr2 (205-256)||(4516468-4516518)
chr2 (204-247)||(21377189-21377232)
chr2 (194-245)||(31158547-31158598)
chr2 (195-232)||(10546153-10546190)
chr2 (194-246)||(4795730-4795782)
chr2 (202-234)||(19614981-19615013)
chr2 (202-246)||(45235932-45235976)
[»] scaffold0187 (4 HSPs)
scaffold0187 (194-254)||(10154-10214)
scaffold0187 (194-254)||(20482-20542)
scaffold0187 (204-256)||(8912-8964)
scaffold0187 (204-256)||(19240-19292)
[»] scaffold0258 (1 HSPs)
scaffold0258 (194-256)||(13129-13191)
[»] scaffold1176 (1 HSPs)
scaffold1176 (195-254)||(1692-1751)
[»] scaffold0005 (1 HSPs)
scaffold0005 (202-256)||(226520-226574)
[»] scaffold0024 (1 HSPs)
scaffold0024 (195-256)||(83842-83903)
[»] scaffold0254 (1 HSPs)
scaffold0254 (195-255)||(4125-4185)
[»] scaffold0057 (3 HSPs)
scaffold0057 (204-256)||(24883-24935)
scaffold0057 (195-256)||(46798-46859)
scaffold0057 (201-246)||(46996-47041)
[»] scaffold0049 (1 HSPs)
scaffold0049 (194-253)||(58947-59006)
[»] scaffold0311 (1 HSPs)
scaffold0311 (195-253)||(10780-10838)
[»] scaffold0223 (1 HSPs)
scaffold0223 (194-256)||(11099-11160)
[»] scaffold0116 (1 HSPs)
scaffold0116 (195-249)||(8865-8919)
[»] scaffold0036 (1 HSPs)
scaffold0036 (194-253)||(35124-35184)
[»] scaffold0194 (1 HSPs)
scaffold0194 (194-245)||(24642-24693)
[»] scaffold0031 (1 HSPs)
scaffold0031 (202-255)||(43097-43150)
[»] scaffold0018 (1 HSPs)
scaffold0018 (228-256)||(73001-73029)


Alignment Details
Target: chr7 (Bit Score: 59; Significance: 5e-25; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 32758290 - 32758228
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32758290 ctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 32758228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 11617695 - 11617756
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11617695 tgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 11617756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 47077959 - 47078021
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  47077959 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 47078021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 10693177 - 10693239
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  10693177 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttactagttgcgcc 10693239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 19426995 - 19427057
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  19426995 ctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccagttgcgcc 19427057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 21172113 - 21172175
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  21172113 ctgtttccaggacttgaacccgtgacctttcagttacatgacaacaactttaccagttgcgcc 21172175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 42495941 - 42496003
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  42495941 ctgtttccaggacttgaacccgtgacctttcagtcatatgacaacaactttaccagttgcgcc 42496003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 256
Target Start/End: Original strand, 48735235 - 48735289
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  48735235 aggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 48735289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 43557501 - 43557441
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcg 254  Q
    |||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  43557501 ctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcg 43557441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 2541125 - 2541188
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttc-agtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  2541125 ctgtttccaggacttgaacccgtgacctttccagtcacatgacaacaactttaccagttgcgcc 2541188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 14732928 - 14732990
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| |||||||||||||  |||| ||||||||||||||||||||||||||||||||||||    
T  14732928 ctgtttccaggacttgaacccatgacttttcagtcacatgacaacaactttaccagttgcgcc 14732990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 27629663 - 27629601
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||    
T  27629663 ctgtttccaggacttgaacccgtgacctttcggtcaaatgacaacaactttaccagttgcgcc 27629601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 35334920 - 35334982
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||  |||||||| |||||||||||||||||||||||||||||||||    
T  35334920 ctgtttccaggacttgaactcgtgaccttccagtcacatgacaacaactttaccagttgcgcc 35334982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 42798698 - 42798636
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| || |||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  42798698 ctgtttccaagacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcc 42798636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 42805553 - 42805491
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||    
T  42805553 ctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttacgcc 42805491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 7794612 - 7794673
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgc 255  Q
    |||||| ||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||    
T  7794612 ctgtttccaggacttgaacccgtgaccttccagtcacataacaacaactttaccagttgcgc 7794673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 34626313 - 34626374
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgc 255  Q
    |||||| ||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||    
T  34626313 ctgtttccaggacttgaatctgtggcctttcaatcacatgacaacaactttaccagttgcgc 34626374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 46354222 - 46354161
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    ||||| ||||||||||||| |||||||| || ||||||||||||||||||||||||||||||    
T  46354222 tgtttccaggacttgaacccgtgaccttccaatcacatgacaacaactttaccagttgcgcc 46354161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 256
Target Start/End: Complemental strand, 7193106 - 7193052
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||| ||||    
T  7193106 aggacttgaacccgtgacctttcagtcacatgacaacaactttacaagttacgcc 7193052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 11741824 - 11741774
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttt 244  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  11741824 ctgttttcaggacttgaacccatgacctttcagtcacatgacaacaacttt 11741774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 18327063 - 18327001
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| | ||||||||||| ||||||||  ||||||||||||||||||||||||||||||||    
T  18327063 ctgtttccgggacttgaacccgtgaccttcaagtcacatgacaacaactttaccagttgcgcc 18327001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 256
Target Start/End: Original strand, 28362259 - 28362312
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  28362259 aggacttgaacctgtgacctttcagccacatgacaacaactttacc-gttgcgcc 28362312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 33872016 - 33872070
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccag 249  Q
    ||||| ||||||||||||| | |||||||||||||||||||||||||||||||||    
T  33872016 tgtttccaggacttgaacccgcgacctttcagtcacatgacaacaactttaccag 33872070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 22699083 - 22699136
Alignment:
Q  201 caggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcg 254  Q
    |||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  22699083 caggacttgaacccataacctttcagtcacatgacaacaactttaccagttgcg 22699136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 29140467 - 29140528
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    ||||||||  |||||||  |||||||||||||| ||||||||||||||||||||||||||||    
T  29140467 tgttttcaaaacttgaatgtgtgacctttcagttacatgacaacaactttaccagttgcgcc 29140528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 5180263 - 5180323
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcg 254  Q
    |||||| ||| | |||||||  |||||||||||||||||||||||||||||||||||||||    
T  5180263 ctgtttccagaagttgaacccttgacctttcagtcacatgacaacaactttaccagttgcg 5180323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 256
Target Start/End: Complemental strand, 40463896 - 40463844
Alignment:
Q  204 gacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||||||| |||||||| |||||||||||||||||||||||| ||||||||    
T  40463896 gacttgaacccgtgaccttacagtcacatgacaacaactttaccggttgcgcc 40463844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 246
Target Start/End: Complemental strand, 6736918 - 6736867
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttac 246  Q
    |||||| |||||||||||| |||||||||||||| |||||||||||||||||    
T  6736918 tgttttgaggacttgaacccgtgacctttcagtcgcatgacaacaactttac 6736867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 248
Target Start/End: Complemental strand, 13805124 - 13805077
Alignment:
Q  201 caggacttgaacctgtgacctttcagtcacatgacaacaactttacca 248  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||    
T  13805124 caggacttgaacccgttacctttcagtcacatgacaacaactttacca 13805077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 241
Target Start/End: Original strand, 42391204 - 42391251
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaac 241  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||    
T  42391204 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaac 42391251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 1424016 - 1424078
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||| ||||| | |||||||| ||||||||| |||||||||||||||||||||||    
T  1424016 ctgtttccaggatttgaatccgtgaccttccagtcacataacaacaactttaccagttgcgcc 1424078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 256
Target Start/End: Original strand, 3469293 - 3469346
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||||||  ||||||||||||||||||||||||||||||||||| ||||||||    
T  3469293 aggacttgagtctgtgacctttcagtcacatgacaacaactttacc-gttgcgcc 3469346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 262
Target Start/End: Complemental strand, 19265834 - 19265777
Alignment:
Q  204 gacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcctatgct 262  Q
    |||||||||| |||||||||||||||| |||||||||||||||| |||||||| |||||    
T  19265834 gacttgaacccgtgacctttcagtcacgtgacaacaactttacc-gttgcgccaatgct 19265777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 247
Target Start/End: Complemental strand, 19266476 - 19266426
Alignment:
Q  197 ttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 247  Q
    |||||||||||||||||   |||||||||||||||||||||||||||||||    
T  19266476 ttttcaggacttgaacccacgacctttcagtcacatgacaacaactttacc 19266426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 23419780 - 23419841
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||| ||||||||||||||||||| |||||||||||| |||||||||| ||||||||    
T  23419780 ctgtttccagaacttgaacctgtgaccttttagtcacatgacagcaactttacc-gttgcgcc 23419841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 256
Target Start/End: Original strand, 28078245 - 28078299
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||||||||| |||||||| |||||||||||||||||||| || |||||||||    
T  28078245 aggacttgaacccgtgaccttacagtcacatgacaacaacttcacgagttgcgcc 28078299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 42476902 - 42476840
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||| ||||||| | ||||||||| ||||||||||||||||||||||||||| ||||    
T  42476902 ctgtttccagaacttgaatccgtgaccttttagtcacatgacaacaactttaccagttacgcc 42476840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 252
Target Start/End: Complemental strand, 47716488 - 47716430
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttg 252  Q
    |||||| ||||||||||||| |||||||| |||||||||| |||||||||| |||||||    
T  47716488 ctgtttccaggacttgaacccgtgaccttccagtcacatggcaacaacttttccagttg 47716430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 12473332 - 12473271
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    ||||| |||||||||||||  |||||||||||  ||||||||||||||||||| ||||||||    
T  12473332 tgtttgcaggacttgaacccatgacctttcagatacatgacaacaactttaccggttgcgcc 12473271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 252
Target Start/End: Original strand, 8149054 - 8149110
Alignment:
Q  196 gttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttg 252  Q
    |||||||||||||||||  ||||| || |||||||||||||||||| ||||||||||    
T  8149054 gttttcaggacttgaactcgtgactttgcagtcacatgacaacaacattaccagttg 8149110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 7644985 - 7644931
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacca 248  Q
    |||||| ||||||||||||| |||||||||||||||| | ||||||| |||||||    
T  7644985 ctgtttccaggacttgaacccgtgacctttcagtcacgttacaacaaatttacca 7644931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 247
Target Start/End: Original strand, 14099119 - 14099165
Alignment:
Q  201 caggacttgaacctgtgacctttcagtcacatgacaacaactttacc 247  Q
    |||||||| ||||  ||||||||||||||||||||||||||||||||    
T  14099119 caggacttcaacccatgacctttcagtcacatgacaacaactttacc 14099165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 247
Target Start/End: Original strand, 14409136 - 14409182
Alignment:
Q  201 caggacttgaacctgtgacctttcagtcacatgacaacaactttacc 247  Q
    |||||||| ||||  ||||||||||||||||||||||||||||||||    
T  14409136 caggacttcaacccatgacctttcagtcacatgacaacaactttacc 14409182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 248
Target Start/End: Complemental strand, 39123911 - 39123865
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatgacaacaactttacca 248  Q
    |||||||||||| ||| | ||||||||||||||||||||||||||||    
T  39123911 aggacttgaacccgtgtcgtttcagtcacatgacaacaactttacca 39123865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 48123590 - 48123651
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| |||||||||||||  ||||||||||| ||||||| |||||||||||| ||||||||    
T  48123590 ctgtttccaggacttgaacccatgacctttcagacacatgataacaactttacc-gttgcgcc 48123651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 247
Target Start/End: Original strand, 42101991 - 42102044
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 247  Q
    |||||| |||||||||||| | ||||||| ||||||| ||||||||||||||||    
T  42101991 ctgtttccaggacttgaacttttgaccttccagtcacgtgacaacaactttacc 42102044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 29907440 - 29907393
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatg--acaacaactttacc 247  Q
    |||||||||||| |||||||||||||||||||  ||||||||||||||    
T  29907440 aggacttgaacccgtgacctttcagtcacatgatacaacaactttacc 29907393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 2663039 - 2663099
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| |||||||||||||| ||||  | ||||||||| ||||||||||||| |||||||||    
T  2663039 ctgtttccaggacttgaacctatgac--tccagtcacataacaacaactttactagttgcgcc 2663099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 21447619 - 21447557
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    ||||||||| |||||||| | |||||||| || | |||||||||||| |||| ||||||||||    
T  21447619 ctgttttcaagacttgaatccgtgaccttccaattacatgacaacaaatttatcagttgcgcc 21447557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 253
Target Start/End: Original strand, 28685261 - 28685299
Alignment:
Q  215 gtgacctttcagtcacatgacaacaactttaccagttgc 253  Q
    |||| |||||||||||||||||||||||||| |||||||    
T  28685261 gtgatctttcagtcacatgacaacaactttaacagttgc 28685299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 247
Target Start/End: Original strand, 44123727 - 44123780
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 247  Q
    |||||| ||| ||||||||| || | ||||||||||||||||| ||||||||||    
T  44123727 ctgtttccagtacttgaacccgtaatctttcagtcacatgacaccaactttacc 44123780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 25198725 - 25198689
Alignment:
Q  220 ctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  25198725 ctttcagtcatatgacaacaactttaccagttacgcc 25198689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 5e-25; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 11054252 - 11054314
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11054252 ctgttttcaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 11054314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 194 - 253
Target Start/End: Original strand, 47528634 - 47528693
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgc 253  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47528634 ctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgc 47528693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 21646993 - 21646931
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  21646993 ctgtttccaggacttgaacctgtgaccttccagtcacatgacaacaactttaccagttgcgcc 21646931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 48598929 - 48598991
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  48598929 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 48598991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 193 - 256
Target Start/End: Complemental strand, 30639410 - 30639347
Alignment:
Q  193 tctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    ||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  30639410 tctgtttccaggacttgaaccagtgacctttcagtcacaagacaacaactttaccagttgcgcc 30639347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 5306769 - 5306831
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  5306769 ctgtttccaggacttgaacccgtgacctttcagtcacatgacatcaactttaccagttgcgcc 5306831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 5648288 - 5648226
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  5648288 ctgtttccaggacttgaacccgtgaccttacagtcacatgacaacaactttaccagttgcgcc 5648226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 6430731 - 6430793
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6430731 ctgtttccatgacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 6430793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 16408709 - 16408771
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  16408709 ctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcc 16408771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 10660432 - 10660371
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    ||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  10660432 tgtttccaggacttgaacatgtaacctttcagtcacatgacaacaactttaccagttgcgcc 10660371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 10874577 - 10874516
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    ||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  10874577 tgtttccaggacttgaacatgtaacctttcagtcacatgacaacaactttaccagttgcgcc 10874516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 20225012 - 20224951
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    ||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  20225012 tgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcgcc 20224951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 204 - 256
Target Start/End: Complemental strand, 23501812 - 23501760
Alignment:
Q  204 gacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23501812 gacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 23501760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 194 - 250
Target Start/End: Original strand, 44363238 - 44363294
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagt 250  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  44363238 ctgttttcaggacttgaactcgtgacctttcagtcacatgacaacaactttaccagt 44363294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 5313100 - 5313162
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||| ||||    
T  5313100 ctgttttcaggaattgaacccgtgacctttcaatcacatgacaacaactttaccagttacgcc 5313162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 256
Target Start/End: Complemental strand, 14590858 - 14590804
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  14590858 aggacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 14590804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 256
Target Start/End: Complemental strand, 16911583 - 16911529
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  16911583 aggacttgaacccgtgacctttaagtcacatgacaacaactttaccagttgcgcc 16911529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 37494879 - 37494821
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgc 253  Q
    ||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  37494879 tgtttccaggacttgaacctgtgacctttcagtcgcatggcaacaactttaccagttgc 37494821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 13256510 - 13256562
Alignment:
Q  201 caggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgc 253  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  13256510 caggacttgaacctatgaccttccagtcacatgacaacaactttaccagttgc 13256562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 256
Target Start/End: Original strand, 17315412 - 17315466
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  17315412 aggaattgaacccgtgacctttcagtcacatgacaacaactttaccggttgcgcc 17315466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 244
Target Start/End: Original strand, 49938696 - 49938746
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttt 244  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  49938696 ctgtttccaggacttgaacctgtgacctttcagtcacgtgacaacaacttt 49938746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 17043500 - 17043549
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactt 243  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  17043500 ctgtttccaggacttgaacctgtgacctttcagtcacttgacaacaactt 17043549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 47441645 - 47441697
Alignment:
Q  203 ggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  47441645 ggacttgaacctgtgacctttcagtcacgtgacaacaactttacc-gttgcgcc 47441697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 487242 - 487294
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 247  Q
    ||||| || |||||||||| |||||||||||||||||||||||||||||||||    
T  487242 tgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttacc 487294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 250
Target Start/End: Complemental strand, 40915858 - 40915802
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagt 250  Q
    |||||| ||||||||||||| ||||||||  ||||||||||||||||||||||||||    
T  40915858 ctgtttccaggacttgaacccgtgaccttatagtcacatgacaacaactttaccagt 40915802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 54967039 - 54966989
Alignment:
Q  205 acttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  54967039 acttgaacatgtgacctttcagtcacatgacaacaactttacc-gttgcgcc 54966989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 30352697 - 30352759
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| |||||||  |||| |||||||||| ||||| |||||||||||||||||||||||||    
T  30352697 ctgtttccaggactctaacccgtgacctttcggtcacttgacaacaactttaccagttgcgcc 30352759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 32478892 - 32478942
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttta 245  Q
    ||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  32478892 tgtttccaggacttgaacctgtgacctctcggtcacatgacaacaacttta 32478942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 235
Target Start/End: Complemental strand, 7038078 - 7038041
Alignment:
Q  198 tttcaggacttgaacctgtgacctttcagtcacatgac 235  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7038078 tttcaggacttgaacctgtgacctttcagtcacatgac 7038041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 19027876 - 19027823
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacca 248  Q
    ||||| ||||||||||||| |||||||||||||||| ||||||||||| |||||    
T  19027876 tgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactctacca 19027823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 42164255 - 42164315
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    ||||| || |||||||||| |||||||||||||||||||||||||| |||||| ||||||||    
T  42164255 tgtttccaagacttgaacccgtgacctttcagtcacatgacaacaattttacc-gttgcgcc 42164315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 39077900 - 39077948
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaact 242  Q
    |||||| ||||||||||||| ||||||||||| ||||||||||||||||    
T  39077900 ctgtttccaggacttgaacccgtgacctttcaatcacatgacaacaact 39077948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 247
Target Start/End: Complemental strand, 43035268 - 43035224
Alignment:
Q  203 ggacttgaacctgtgacctttcagtcacatgacaacaactttacc 247  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||    
T  43035268 ggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 43035224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 9832417 - 9832468
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttta 245  Q
    |||||||||||||||||||| ||||||||||||||| || ||||||| ||||    
T  9832417 ctgttttcaggacttgaacccgtgacctttcagtcagatcacaacaatttta 9832468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 215 - 254
Target Start/End: Complemental strand, 20405101 - 20405062
Alignment:
Q  215 gtgacctttcagtcacatgacaacaactttaccagttgcg 254  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  20405101 gtgaccttccagtcacatgacaacaactttaccagttgcg 20405062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 248
Target Start/End: Complemental strand, 25343205 - 25343162
Alignment:
Q  205 acttgaacctgtgacctttcagtcacatgacaacaactttacca 248  Q
    ||||||||||||||||| |||||||| |||||||||||||||||    
T  25343205 acttgaacctgtgacctatcagtcacgtgacaacaactttacca 25343162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 240
Target Start/End: Original strand, 7385582 - 7385628
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaa 240  Q
    |||||| |||| |||||||| ||||||||||||||||||||||||||    
T  7385582 ctgtttccagggcttgaacccgtgacctttcagtcacatgacaacaa 7385628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 8473726 - 8473788
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| |  ||||| | |||| ||||||||||||||||||||||||||    
T  8473726 ctgtttccaggacttgaacccgcaaccttccggtcatatgacaacaactttaccagttgcgcc 8473788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 237
Target Start/End: Complemental strand, 25463150 - 25463108
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaa 237  Q
    ||||| ||||||||||||| |||||||||||||||||||||||    
T  25463150 tgtttccaggacttgaacccgtgacctttcagtcacatgacaa 25463108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 30496426 - 30496488
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| || |||||||||  |||||||||||||||| |||||||||||||  ||||||||||    
T  30496426 ctgtttccatgacttgaacacgtgacctttcagtcacgtgacaacaacttttacagttgcgcc 30496488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 256
Target Start/End: Complemental strand, 54730270 - 54730216
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||||||||| |||||||||  ||||||||||||||||||||||  |||||||    
T  54730270 aggacttgaacccgtgaccttttggtcacatgacaacaactttaccgattgcgcc 54730216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 247
Target Start/End: Complemental strand, 35567199 - 35567146
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 247  Q
    |||||| || ||||||||||  |||||||||||| |||||||||||||||||||    
T  35567199 ctgtttccaagacttgaacccatgacctttcagttacatgacaacaactttacc 35567146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 41018900 - 41018945
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaa 240  Q
    ||||| ||||||||||||| |||||||||||||||| |||||||||    
T  41018900 tgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaa 41018945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 23580325 - 23580365
Alignment:
Q  205 acttgaacctgtgacctttcagtcacatgacaacaacttta 245  Q
    ||||||||| |||||||||||||||| ||||||||||||||    
T  23580325 acttgaacccgtgacctttcagtcacgtgacaacaacttta 23580365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 245
Target Start/End: Original strand, 30690296 - 30690340
Alignment:
Q  201 caggacttgaacctgtgacctttcagtcacatgacaacaacttta 245  Q
    ||||||||||||| |||||||||||||||| ||||||| ||||||    
T  30690296 caggacttgaacccgtgacctttcagtcacttgacaaccacttta 30690340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 49938554 - 49938594
Alignment:
Q  204 gacttgaacctgtgacctttcagtcacatgacaacaacttt 244  Q
    |||||||| |||||||||||||||||| |||||||||||||    
T  49938554 gacttgaatctgtgacctttcagtcacgtgacaacaacttt 49938594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 215 - 254
Target Start/End: Original strand, 55766593 - 55766632
Alignment:
Q  215 gtgacctttcagtcacatgacaacaactttaccagttgcg 254  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  55766593 gtgaccttccggtcacatgacaacaactttaccagttgcg 55766632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 246
Target Start/End: Original strand, 3580952 - 3580994
Alignment:
Q  204 gacttgaacctgtgacctttcagtcacatgacaacaactttac 246  Q
    |||||||||  ||||| ||||||||||||||||||||||||||    
T  3580952 gacttgaactcgtgacttttcagtcacatgacaacaactttac 3580994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 226 - 256
Target Start/End: Complemental strand, 18969738 - 18969708
Alignment:
Q  226 gtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||||||||||||||||||||||||||||    
T  18969738 gtcacatgacaacaactttaccagttgcgcc 18969708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 256
Target Start/End: Original strand, 20373908 - 20373962
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||| |||||| |||||| ||||||||| |||| |||||||| ||||||||||||    
T  20373908 aggaattgaacatgtgacatttcagtcatatgagaacaacttgaccagttgcgcc 20373962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 256
Target Start/End: Original strand, 50856350 - 50856403
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||||||||| ||||||||||| |||  |||||||||||||||| ||||||||    
T  50856350 aggacttgaacccgtgacctttcaatcatgtgacaacaactttacc-gttgcgcc 50856403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 243
Target Start/End: Complemental strand, 54175085 - 54175043
Alignment:
Q  201 caggacttgaacctgtgacctttcagtcacatgacaacaactt 243  Q
    ||||||||||| | ||||| |||||||||||||||||||||||    
T  54175085 caggacttgaatccgtgacatttcagtcacatgacaacaactt 54175043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 54640445 - 54640506
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| || |||||||||| |||||||||||| ||| ||||||||| |||||| ||||||||    
T  54640445 ctgtttccaagacttgaacccgtgacctttcagccacgtgacaacaattttacc-gttgcgcc 54640506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 12257707 - 12257752
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatgacaacaactttacc 247  Q
    |||| ||||||| ||||||||||| |||| ||||||||||||||||    
T  12257707 aggatttgaacccgtgacctttcaatcacgtgacaacaactttacc 12257752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 206 - 247
Target Start/End: Original strand, 39029179 - 39029220
Alignment:
Q  206 cttgaacctgtgacctttcagtcacatgacaacaactttacc 247  Q
    ||||||||| |||||||| ||||||| |||||||||||||||    
T  39029179 cttgaacctatgaccttttagtcacacgacaacaactttacc 39029220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 238
Target Start/End: Original strand, 32629382 - 32629418
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatgacaac 238  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  32629382 aggatttgaacccgtgacctttcagtcacatgacaac 32629418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 5e-25; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 26869758 - 26869696
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26869758 ctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 26869696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 8247795 - 8247857
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8247795 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 8247857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 10870057 - 10870119
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10870057 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 10870119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 4495773 - 4495831
Alignment:
Q  197 ttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgc 255  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  4495773 ttttcaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgc 4495831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 7696991 - 7697053
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  7696991 ctgtttccaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagttgcgcc 7697053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 13730710 - 13730772
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  13730710 ctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcc 13730772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 46421143 - 46421205
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  46421143 ctgtttccaggacttgaacccgtgacctttaagtcacatgacaacaactttaccagttgcgcc 46421205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 52926316 - 52926378
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  52926316 ctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcc 52926378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 1217141 - 1217079
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||    
T  1217141 ctgtttccaggacttgaacccgtgacctttcagtgacatgactacaactttaccagttgcgcc 1217079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 9607254 - 9607192
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| |||||||||||||  ||||||||||||||||||||||||||||||| |||||||||    
T  9607254 ctgtttccaggacttgaaccgatgacctttcagtcacatgacaacaactttacaagttgcgcc 9607192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 12914141 - 12914203
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| |||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||    
T  12914141 ctgtttccaggacttgaacttgtgacctttcggtcacattacaacaactttaccagttgcgcc 12914203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 29366828 - 29366890
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||    
T  29366828 ctgtttccaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagttacgcc 29366890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 252
Target Start/End: Complemental strand, 39203559 - 39203509
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttg 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  39203559 aggacttgaacctgtgacctttcagtcacatgacaacaactttacaagttg 39203509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 40272919 - 40272980
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    ||||| |||||||||||||  ||||||| |||||||||||||||||||||||||||||||||    
T  40272919 tgtttccaggacttgaacccatgaccttccagtcacatgacaacaactttaccagttgcgcc 40272980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 13628898 - 13628957
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaac-tttaccagttg 252  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  13628898 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttttaccagttg 13628957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 5173827 - 5173889
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaac-tttaccagttgcgcc 256  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||    
T  5173827 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttttacgagttgcgcc 5173889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 256
Target Start/End: Complemental strand, 16735484 - 16735430
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||||||||| ||||| || |||||||||||||||||||||||||||||||||    
T  16735484 aggacttgaacccgtgacgttacagtcacatgacaacaactttaccagttgcgcc 16735430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 22123021 - 22123083
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| | |||||||||||||||||||||||| ||||||||| |||||    
T  22123021 ctgtttccaggacttgaacccgcgacctttcagtcacatgacaacaaatttaccagtggcgcc 22123083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 26573178 - 26573117
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||    
T  26573178 ctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc-gttgcgcc 26573117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 247
Target Start/End: Complemental strand, 53062089 - 53062036
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 247  Q
    |||||| ||||||||||||  |||||||||||||||||||||||||||||||||    
T  53062089 ctgtttccaggacttgaacacgtgacctttcagtcacatgacaacaactttacc 53062036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 256
Target Start/End: Original strand, 25517297 - 25517341
Alignment:
Q  212 cctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  25517297 cctgtgaccttccagtcacatgacaacaactttaccagttgcgcc 25517341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 34420750 - 34420802
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttac 246  Q
    |||||| ||||||||||||| |||||||||||||||| |||||||||||||||    
T  34420750 ctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttac 34420802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 45620935 - 45620996
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||| ||||||||| |||||||||||||||| |||||||||||||||| ||||||||    
T  45620935 ctgtttccagaacttgaacccgtgacctttcagtcacgtgacaacaactttacc-gttgcgcc 45620996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 30928253 - 30928302
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactt 243  Q
    |||||| ||||||||||||| ||||||||||||||||||||||| |||||    
T  30928253 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaagaactt 30928302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 6411927 - 6411987
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcg 254  Q
    |||||| || ||||||||||  |||||| ||||| ||||||||||||||||||||||||||    
T  6411927 ctgtttacaagacttgaacccatgacctatcagttacatgacaacaactttaccagttgcg 6411987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 12525458 - 12525399
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||| ||||||||||||||||||||| |||   ||||||||||||||||||||    
T  12525458 ctgtttccaggactcgaacctgtgacctttcagtcatatg---acaactttaccagttgcgcc 12525399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 516460 - 516417
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaa 237  Q
    |||||| ||||||||||||| |||||||||||||||||||||||    
T  516460 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaa 516417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 22609817 - 22609756
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| || |||||||||| || ||||| |||||||||||||||||||||||| ||||||||    
T  22609817 ctgtttccaagacttgaacccgttaccttacagtcacatgacaacaactttacc-gttgcgcc 22609756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 25944518 - 25944468
Alignment:
Q  196 gttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttac 246  Q
    |||| |||||||||||||  ||||||||||||||| |||||||||||||||    
T  25944518 gtttccaggacttgaacccatgacctttcagtcacgtgacaacaactttac 25944468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 7943041 - 7942993
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaact 242  Q
    |||||| ||||||||||| | |||||||| |||||||||||||||||||    
T  7943041 ctgtttccaggacttgaatccgtgaccttccagtcacatgacaacaact 7942993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 254
Target Start/End: Complemental strand, 21875042 - 21875011
Alignment:
Q  223 tcagtcacatgacaacaactttaccagttgcg 254  Q
    ||||||||||||||||||||||||||||||||    
T  21875042 tcagtcacatgacaacaactttaccagttgcg 21875011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 33075926 - 33075977
Alignment:
Q  196 gttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 247  Q
    |||||||||| |||||| |||||||| ||| |||||||||||||| ||||||    
T  33075926 gttttcaggatttgaacatgtgacctctcaatcacatgacaacaattttacc 33075977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 249
Target Start/End: Complemental strand, 33235569 - 33235526
Alignment:
Q  207 ttgaacctgtgacctttca-gtcacatgacaacaactttaccag 249  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  33235569 ttgaacttgtgacctttcatgtcacatgacaacaactttaccag 33235526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 35417967 - 35417906
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||| ||||||  ||||||| |||||||||||| |||||||||||| ||||||||    
T  35417967 ctgtttccaggatttgaactcgtgacctctcagtcacatgataacaactttacc-gttgcgcc 35417906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 11461758 - 11461807
Alignment:
Q  205 acttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcg 254  Q
    |||| ||||||| ||||| | |||| ||||||||||||||||||||||||    
T  11461758 acttaaacctgtaaccttcctgtcatatgacaacaactttaccagttgcg 11461807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 254
Target Start/End: Complemental strand, 26782409 - 26782357
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcg 254  Q
    |||||||||| | ||||||||||| || |||||||| |||||||||| |||||    
T  26782409 aggacttgaatccgtgacctttcaatcgcatgacaataactttaccaattgcg 26782357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 247
Target Start/End: Complemental strand, 28904985 - 28904941
Alignment:
Q  203 ggacttgaacctgtgacctttcagtcacatgacaacaactttacc 247  Q
    |||||| ||| |||||| ||| |||||||||||||||||||||||    
T  28904985 ggacttaaacatgtgactttttagtcacatgacaacaactttacc 28904941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 53996673 - 53996725
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 247  Q
    ||||| || |||||||||  ||||||||||||||| |||||||||| ||||||    
T  53996673 tgtttccacgacttgaacacgtgacctttcagtcaaatgacaacaaatttacc 53996725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 5e-25; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 45812641 - 45812703
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  45812641 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttatcagttgcgcc 45812703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 18944695 - 18944633
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18944695 ctgtttccaggccttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 18944633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 34725202 - 34725264
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  34725202 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 34725264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 47214563 - 47214501
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  47214563 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 47214501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 22930173 - 22930235
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  22930173 ctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcgcc 22930235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 252
Target Start/End: Complemental strand, 27474333 - 27474275
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttg 252  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27474333 ctgtttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccagttg 27474275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 32632662 - 32632724
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  32632662 ctgtttccaggacttgaacccgtgacctttcagtcatatgacaacaactttaccagttgcgcc 32632724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 41319912 - 41319970
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttg 252  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  41319912 ctgtttccaggacttaaacctgtgacctttcagtcacatgacaacaactttaccagttg 41319970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 23768426 - 23768486
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcg 254  Q
    |||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23768426 ctgtttccatgacttgaacctgtgaccttacagtcacatgacaacaactttaccagttgcg 23768486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 253
Target Start/End: Original strand, 20004198 - 20004257
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgc 253  Q
    |||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  20004198 ctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgc 20004257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 194 - 248
Target Start/End: Original strand, 6983915 - 6983969
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacca 248  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  6983915 ctgtttccaggacttgaacctgtgacctttcagtcacgtgacaacaactttacca 6983969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 14617090 - 14617028
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||    
T  14617090 ctgtttccaggacttgaactcgtgacctttcagtcacatgacaacaactttaccggttgcgcc 14617028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 18724651 - 18724712
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  18724651 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc-gttgcgcc 18724712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 30395834 - 30395896
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||    
T  30395834 ctgtttccaggacttgaacccgtgaccttaaagtcacatgacaacaactttaccagttgcgcc 30395896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 34714675 - 34714613
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| || |||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  34714675 ctgtttccatgacttgaacccgtgacctttcaatcacatgacaacaactttaccagttgcgcc 34714613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 256
Target Start/End: Complemental strand, 40424786 - 40424732
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  40424786 aggacttgaacccgtggcctttcagtcacatgacaacaactttaccagttgcgcc 40424732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 46991855 - 46991797
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgc 253  Q
    ||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  46991855 tgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgc 46991797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 20036271 - 20036218
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacca 248  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20036271 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacca 20036218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 8197088 - 8197036
Alignment:
Q  201 caggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgc 253  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  8197088 caggacttgaacccgtgacctttcagtcacatgacaacaacttgaccagttgc 8197036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 19932869 - 19932920
Alignment:
Q  205 acttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  19932869 acttgaacccatgacctttcagtcacatgacaacaactttaccagttgcgcc 19932920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 2435893 - 2435954
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||    
T  2435893 ctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc-gttgcgcc 2435954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 4430132 - 4430194
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    ||||||||| ||||| |||| |||||||| |||||||||||||||||||||||||| ||||||    
T  4430132 ctgttttcaagacttaaacccgtgaccttccagtcacatgacaacaactttaccagctgcgcc 4430194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 27201699 - 27201645
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacca 248  Q
    |||||| |||||||||||||  |||||||||||||||||||||||||||||||||    
T  27201699 ctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttacca 27201645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 256
Target Start/End: Original strand, 38478394 - 38478448
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||||||||| |||||||||||||||||||||||||| ||||| |||||||||    
T  38478394 aggacttgaacccgtgacctttcagtcacatgacaacaagtttactagttgcgcc 38478448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 46248059 - 46248117
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttg 252  Q
    |||||| || |||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  46248059 ctgtttccaagacttgaacccgtgacatttcagtcacatgacaacaactttaccagttg 46248117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 6925145 - 6925096
Alignment:
Q  201 caggacttgaacctgtgacctttcagtcacatgacaacaactttaccagt 250  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  6925145 caggacttgaacccgtgaccttccagtcacatgacaacaactttaccagt 6925096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 18742080 - 18742129
Alignment:
Q  207 ttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||    
T  18742080 ttgaacccttgacctttcagtcacatgacaacaactttaccagttgcgcc 18742129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 25290214 - 25290153
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    ||||| || |||||||||  ||||||||||||||||||||||||||||||||| ||||||||    
T  25290214 tgtttccaagacttgaacacgtgacctttcagtcacatgacaacaactttacctgttgcgcc 25290153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 247
Target Start/End: Original strand, 50760332 - 50760385
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 247  Q
    |||||||||||||||||||| ||||||| |||||||||||||||| ||||||||    
T  50760332 ctgttttcaggacttgaacccgtgacctctcagtcacatgacaactactttacc 50760385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 247
Target Start/End: Complemental strand, 52910269 - 52910216
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 247  Q
    |||||| || || |||||||||||||||||||||||||||||||||||||||||    
T  52910269 ctgtttccaagagttgaacctgtgacctttcagtcacatgacaacaactttacc 52910216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 2436000 - 2436052
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 247  Q
    ||||| ||||||||||||| |||||||||||||||| ||||||||||||||||    
T  2436000 tgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 2436052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 10668277 - 10668210
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtc-----acatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| ||||||||||||||     ||||||||||||||||||||||||||||    
T  10668277 ctgtttccaggacttgaacccgtgacctttcagtcacatcacatgacaacaactttaccagttgcgcc 10668210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 253
Target Start/End: Original strand, 14988025 - 14988084
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgc 253  Q
    ||||||||||||||||||| |||||| ||  ||||| |||||||||||||||||||||||    
T  14988025 ctgttttcaggacttgaacttgtgactttctagtcatatgacaacaactttaccagttgc 14988084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 9939512 - 9939450
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaac-tttaccagttgcgcc 256  Q
    ||||| ||||||||||||  ||||||||||||||||||||||||||| |||||| ||||||||    
T  9939512 tgtttccaggacttgaactcgtgacctttcagtcacatgacaacaacttttaccggttgcgcc 9939450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 248
Target Start/End: Complemental strand, 19414483 - 19414437
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatgacaacaactttacca 248  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  19414483 aggacttgaacccgtgacctttcagtcatatgacaacaactttacca 19414437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 33223036 - 33222974
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| || ||||| || | ||||||||||||||||||||||||||||||||| ||||||||    
T  33223036 ctgtttccatgacttaaatccgtgacctttcagtcacatgacaacaactttaccggttgcgcc 33222974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 247
Target Start/End: Original strand, 35117881 - 35117927
Alignment:
Q  201 caggacttgaacctgtgacctttcagtcacatgacaacaactttacc 247  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||    
T  35117881 caggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 35117927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 45402146 - 45402085
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| || ||||| || ||||||||||||||||||||||||||||||    
T  45402146 ctgtttccaggacttgaacccgttaccttcca-tcacatgacaacaactttaccagttgcgcc 45402085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 22151556 - 22151495
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgc 255  Q
    |||||| ||| |||||||||| ||||||| |||||| ||||||||||||||| |||||||||    
T  22151556 ctgtttccagaacttgaacctatgaccttacagtcagatgacaacaactttatcagttgcgc 22151495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 244
Target Start/End: Complemental strand, 22327150 - 22327101
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttt 244  Q
    ||||| ||||||||||||| | ||||||||||||||||||||||||||||    
T  22327150 tgtttccaggacttgaacccgcgacctttcagtcacatgacaacaacttt 22327101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 35019281 - 35019221
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    ||||| ||||||||||| |||||||||||||||||  |||||||||||||||| ||||||||    
T  35019281 tgtttacaggacttgaatctgtgacctttcagtcatgtgacaacaactttacc-gttgcgcc 35019221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 256
Target Start/End: Original strand, 18335955 - 18336014
Alignment:
Q  197 ttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    ||||||| |||||||| ||||||||||||| |||||| ||||||||||| || |||||||    
T  18335955 ttttcagaacttgaacatgtgacctttcagacacatggcaacaactttatcacttgcgcc 18336014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 246
Target Start/End: Original strand, 25468370 - 25468421
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttac 246  Q
    ||||| |||||||||||||  |||||||||| ||||||||||||||||||||    
T  25468370 tgtttccaggacttgaacccatgacctttcaatcacatgacaacaactttac 25468421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 247
Target Start/End: Original strand, 10378838 - 10378884
Alignment:
Q  201 caggacttgaacctgtgacctttcagtcacatgacaacaactttacc 247  Q
    ||||||||||||| || ||||||||||||| ||||||||||||||||    
T  10378838 caggacttgaacccgtaacctttcagtcacgtgacaacaactttacc 10378884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 12126941 - 12127003
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||| |||| |||| ||||||||||| | |||||||||||||||||| |||||||||    
T  12126941 ctgtttccagaacttaaacccgtgacctttcaattacatgacaacaactttacgagttgcgcc 12127003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 18335394 - 18335456
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| |||||||| ||| ||||||||||||| |||||||||| ||||||| || |||||||    
T  18335394 ctgtttccaggactttaacttgtgacctttcagacacatgacaaaaactttatcacttgcgcc 18335456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 21006185 - 21006136
Alignment:
Q  205 acttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcg 254  Q
    |||||||||| ||||||||||||| ||||||||||| |||||| ||||||    
T  21006185 acttgaacctttgacctttcagtcgcatgacaacaattttaccggttgcg 21006136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 31272481 - 31272522
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgaca 236  Q
    ||||| |||||||||||||||||||||||||||||| |||||    
T  31272481 tgtttccaggacttgaacctgtgacctttcagtcacgtgaca 31272522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 49546014 - 49546074
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| || |||||||||||| ||||||||| ||| |||||||||||||||| ||||||||    
T  49546014 tgttttaagaacttgaacctgtaacctttcagccacgtgacaacaactttacc-gttgcgcc 49546074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 19701622 - 19701570
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttac 246  Q
    ||||||||| ||||| |||| ||||| ||||||||||| ||||||||||||||    
T  19701622 ctgttttcatgacttaaacccgtgacatttcagtcacacgacaacaactttac 19701570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 246
Target Start/End: Original strand, 44485216 - 44485267
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttac 246  Q
    ||||| |||||||  |||| ||||||||||| ||||||||||||||||||||    
T  44485216 tgtttccaggactataacccgtgacctttcaatcacatgacaacaactttac 44485267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 256
Target Start/End: Complemental strand, 11596557 - 11596504
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||||||||| ||||| |||||||||||||||| | |||||||| ||||||||    
T  11596557 aggacttgaacccgtgacatttcagtcacatgacagccactttacc-gttgcgcc 11596504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 252
Target Start/End: Complemental strand, 21723715 - 21723658
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttg 252  Q
    |||||| ||||||| |||| ||| ||| | |||||||||||||||||||||||||||||    
T  21723715 ctgtttccaggact-gaacttgtaaccatccagtcacatgacaacaactttaccagttg 21723658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 43768210 - 43768168
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgaca 236  Q
    |||||| ||||||||||||| ||||||||||||| ||||||||    
T  43768210 ctgtttccaggacttgaacccgtgacctttcagtgacatgaca 43768168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 50811991 - 50811930
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| |||||| |||  | |||||||||||||||| |||||||||||||||| ||||||||    
T  50811991 ctgtttccaggacatgattccgtgacctttcagtcacgtgacaacaactttacc-gttgcgcc 50811930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 10163810 - 10163749
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    ||||||||| |||| ||| ||| || ||| || |||||||||||||||||| ||||||||||    
T  10163810 tgttttcagaacttaaacttgtaacattttagccacatgacaacaactttatcagttgcgcc 10163749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 17470460 - 17470505
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatgacaacaactttacc 247  Q
    ||||||||||||  ||||| ||||||||| ||||||||||||||||    
T  17470460 aggacttgaacccatgaccattcagtcacgtgacaacaactttacc 17470505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 248
Target Start/End: Original strand, 15511259 - 15511311
Alignment:
Q  196 gttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacca 248  Q
    |||| |||||||| ||  ||||||||||||| ||||| |||||||||||||||    
T  15511259 gtttccaggacttcaatatgtgacctttcagccacattacaacaactttacca 15511311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 230
Target Start/End: Complemental strand, 35005175 - 35005139
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcac 230  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  35005175 ctgttttcaagacttgaacccgtgacctttcagtcac 35005139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 30608 - 30546
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  30608 ctgtttccaggacttgaaccggtgacctttcagtcacatgacaacaactttaccagttgcgcc 30546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 12670354 - 12670416
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  12670354 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 12670416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 20869602 - 20869664
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  20869602 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 20869664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 30454201 - 30454263
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  30454201 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 30454263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 17823605 - 17823543
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  17823605 ctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccagttgcgcc 17823543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 28407445 - 28407383
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  28407445 ctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcc 28407383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 39461102 - 39461164
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  39461102 ctgtttccaggacttgaacccgtgacctttcagtctcatgacaacaactttaccagttgcgcc 39461164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 24245478 - 24245421
Alignment:
Q  196 gttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgc 253  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  24245478 gtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgc 24245421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 20284179 - 20284239
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcg 254  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  20284179 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacccgttgcg 20284239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 21070808 - 21070868
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcg 254  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  21070808 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacccgttgcg 21070868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 253
Target Start/End: Original strand, 28817732 - 28817791
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgc 253  Q
    |||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  28817732 ctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgc 28817791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 2626548 - 2626486
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||    
T  2626548 ctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccaattgcgcc 2626486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 256
Target Start/End: Complemental strand, 13160723 - 13160669
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  13160723 aggacttgaacccgtgaccttacagtcacatgacaacaactttaccagttgcgcc 13160669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 18164865 - 18164927
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||    
T  18164865 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttcaccggttgcgcc 18164927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 194 - 252
Target Start/End: Complemental strand, 25250551 - 25250493
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttg 252  Q
    |||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  25250551 ctgtttccaggacttgaacatgtgaccttccagtcacatgacaacaactttaccagttg 25250493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 35261708 - 35261646
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| |||| |||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  35261708 ctgtttccagggcttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcc 35261646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 36720825 - 36720763
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||    
T  36720825 ctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttacgcc 36720763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 7136636 - 7136697
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    ||||| |||||||||||||  ||||||| |||||||||||||||||||||||||||||||||    
T  7136636 tgtttccaggacttgaacccatgaccttccagtcacatgacaacaactttaccagttgcgcc 7136697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 6760851 - 6760789
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| ||||||||  ||||| ||||||||||||||||||||||||||    
T  6760851 ctgtttccaggacttgaacccgtgaccttctagtcatatgacaacaactttaccagttgcgcc 6760789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 29521791 - 29521853
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  29521791 ctgtttccaggacttgaacccgtgaccttccagtcacacgacaacaactttatcagttgcgcc 29521853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 42083805 - 42083866
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| |||||||||||||||| ||||||||| |||||| ||||||||    
T  42083805 ctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaattttacc-gttgcgcc 42083866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 8897871 - 8897928
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttg 252  Q
    ||||| |||||||| |||| |||||||| | |||||||||||||||||||||||||||    
T  8897871 tgtttccaggacttcaacccgtgaccttgctgtcacatgacaacaactttaccagttg 8897928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 31454216 - 31454155
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||||||||| ||||| ||||||||||||  ||||||||||||||| |||| ||||||||    
T  31454216 tgttttcaggacatgaacatgtgacctttcaaccacatgacaacaactataccggttgcgcc 31454155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 44530177 - 44530116
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    ||||| || |||||||||| ||||||||  |||||||||||| |||||||||||||||||||    
T  44530177 tgtttccaagacttgaacccgtgaccttctagtcacatgacagcaactttaccagttgcgcc 44530116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 44781613 - 44781673
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    ||||| ||||||||||||| |||| ||||||||||| |||||||||||||||| ||||||||    
T  44781613 tgtttccaggacttgaacccgtgaactttcagtcacgtgacaacaactttacc-gttgcgcc 44781673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 250
Target Start/End: Complemental strand, 45071294 - 45071238
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagt 250  Q
    |||||| ||| ||||||||| |||||||| || ||||||||||||||||||||||||    
T  45071294 ctgtttccagaacttgaacccgtgaccttacaatcacatgacaacaactttaccagt 45071238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 253
Target Start/End: Complemental strand, 11748328 - 11748269
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgc 253  Q
    |||||| || |||||||||| ||||| |||||||||||||||||||| || |||||||||    
T  11748328 ctgtttccaagacttgaacccgtgacatttcagtcacatgacaacaatttcaccagttgc 11748269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 26954161 - 26954107
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacca 248  Q
    |||||| ||||||||||||| ||||||||  | ||||||||||||||||||||||    
T  26954161 ctgtttccaggacttgaacccgtgaccttctaatcacatgacaacaactttacca 26954107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 241
Target Start/End: Complemental strand, 31457201 - 31457155
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaac 241  Q
    ||||| ||||||||||||| |||||||||||| ||||||||||||||    
T  31457201 tgtttacaggacttgaacccgtgacctttcagccacatgacaacaac 31457155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 244
Target Start/End: Complemental strand, 35105951 - 35105902
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttt 244  Q
    ||||| ||||||||||||| |||||||||||| ||| |||||||||||||    
T  35105951 tgtttccaggacttgaacccgtgacctttcagccacgtgacaacaacttt 35105902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 11001057 - 11001109
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 247  Q
    ||||||||| | ||||||| | ||||||||| |||||||||||||||||||||    
T  11001057 tgttttcagaatttgaacccgcgacctttcaatcacatgacaacaactttacc 11001109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 247
Target Start/End: Complemental strand, 22598185 - 22598133
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 247  Q
    ||||| ||||| ||||||| |||||||||||||||  ||||||||||||||||    
T  22598185 tgtttccaggatttgaacccgtgacctttcagtcatgtgacaacaactttacc 22598133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 12625917 - 12625858
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcg 254  Q
    ||||| |||||||||| || |||||||   ||||||| ||||||||||||||||||||||    
T  12625917 tgtttccaggacttgagcccgtgacctacaagtcacacgacaacaactttaccagttgcg 12625858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 244
Target Start/End: Original strand, 30962879 - 30962929
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttt 244  Q
    |||||| |||||||||||   ||||||||||| ||||||||||||||||||    
T  30962879 ctgtttccaggacttgaagtcgtgacctttcaatcacatgacaacaacttt 30962929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 227 - 256
Target Start/End: Original strand, 40605044 - 40605073
Alignment:
Q  227 tcacatgacaacaactttaccagttgcgcc 256  Q
    ||||||||||||||||||||||||||||||    
T  40605044 tcacatgacaacaactttaccagttgcgcc 40605073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 254
Target Start/End: Original strand, 23286431 - 23286459
Alignment:
Q  226 gtcacatgacaacaactttaccagttgcg 254  Q
    |||||||||||||||||||||||||||||    
T  23286431 gtcacatgacaacaactttaccagttgcg 23286459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 246
Target Start/End: Original strand, 24365178 - 24365218
Alignment:
Q  206 cttgaacctgtgacctttcagtcacatgacaacaactttac 246  Q
    |||||||| ||||| ||| ||||||||||||||||||||||    
T  24365178 cttgaacccgtgacattttagtcacatgacaacaactttac 24365218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 40607830 - 40607890
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcg 254  Q
    |||||||| ||||||||||   |||| || |||| |||||||||||||||||||| |||||    
T  40607830 ctgttttcgggacttgaactcatgacattccagttacatgacaacaactttaccaattgcg 40607890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 1346993 - 1346931
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1346993 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 1346931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 1354861 - 1354923
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1354861 ctgtttccaggacttgaaccagtgacctttcagtcacatgacaacaactttaccagttgcgcc 1354923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 193 - 256
Target Start/End: Original strand, 3815182 - 3815245
Alignment:
Q  193 tctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    ||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  3815182 tctgtttccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 3815245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 12222023 - 12222085
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  12222023 ctgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 12222085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 194 - 247
Target Start/End: Complemental strand, 9161152 - 9161099
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 247  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9161152 ctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 9161099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 2166519 - 2166579
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgc 255  Q
    ||||| ||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||    
T  2166519 tgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttactagttgcgc 2166579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 2178152 - 2178212
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgc 255  Q
    ||||| ||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||    
T  2178152 tgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttactagttgcgc 2178212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 8409270 - 8409210
Alignment:
Q  196 gttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||| ||||||||||| | |||||||||||||||||| |||||||||||||||||||||||    
T  8409270 gtttccaggacttgaatccgtgacctttcagtcacattacaacaactttaccagttgcgcc 8409210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 196 - 256
Target Start/End: Original strand, 13905087 - 13905146
Alignment:
Q  196 gttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||    
T  13905087 gttttcaggacttgagcccgtgacctttcagtcacatgacaacaactttacc-gttgcgcc 13905146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 14553533 - 14553482
Alignment:
Q  201 caggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgc 253  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14553533 caggacttgaacctgtgaccttt-agtcacatgacaacaactttaccagttgc 14553482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 20400685 - 20400634
Alignment:
Q  205 acttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  20400685 acttgaacctgtgacctttcagtcacatgacaacaactataccaattgcgcc 20400634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 14975186 - 14975248
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||| | |||||||| |||||||||||||||||||||||| ||||||||    
T  14975186 ctgtttccaggacttgaatccgtgaccttccagtcacatgacaacaactttaccggttgcgcc 14975248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 256
Target Start/End: Complemental strand, 24734654 - 24734600
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||| |||||| | |||||||||||||||||||||||||||||||||||||||||    
T  24734654 aggatttgaacttttgacctttcagtcacatgacaacaactttaccagttgcgcc 24734600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 256
Target Start/End: Original strand, 33922942 - 33922996
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||    
T  33922942 aggacttgaacctgtgacttttcagtcaaatgacaacaactttaccggttgcgcc 33922996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 247
Target Start/End: Complemental strand, 12889455 - 12889402
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 247  Q
    ||||||||| |||||||||||||||||||||| |||| ||||||||||||||||    
T  12889455 ctgttttcaagacttgaacctgtgacctttcactcacgtgacaacaactttacc 12889402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 29355963 - 29356022
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaa-ctttaccagttg 252  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||  |||||||||||    
T  29355963 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaatttttaccagttg 29356022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 246
Target Start/End: Original strand, 32728273 - 32728314
Alignment:
Q  205 acttgaacctgtgacctttcagtcacatgacaacaactttac 246  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  32728273 acttgaatctgtgacctttcagtcacatgacaacaactttac 32728314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 2755531 - 2755583
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 247  Q
    ||||| || |||||||||||  |||||||||||||||||||||||||||||||    
T  2755531 tgtttgcaagacttgaacctacgacctttcagtcacatgacaacaactttacc 2755583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 253
Target Start/End: Complemental strand, 8417501 - 8417442
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgc 253  Q
    |||||| || ||| |||||  ||||| |||||||||||||||||||||||||||||||||    
T  8417501 ctgtttccatgacctgaactcgtgacatttcagtcacatgacaacaactttaccagttgc 8417442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 202 - 253
Target Start/End: Complemental strand, 12063488 - 12063437
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgc 253  Q
    |||||||||||| |||||||||||||| ||||| |||||||||| |||||||    
T  12063488 aggacttgaacccgtgacctttcagtctcatgataacaactttatcagttgc 12063437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 15866143 - 15866201
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttg 252  Q
    |||||| ||||| |||||||  |||||||||| ||||||| ||||||||||||||||||    
T  15866143 ctgtttccaggaattgaacccatgacctttcaatcacatgccaacaactttaccagttg 15866201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 256
Target Start/End: Original strand, 19649294 - 19649335
Alignment:
Q  215 gtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  19649294 gtgatctttcagtcacatgacaacaactttatcagttgcgcc 19649335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 254
Target Start/End: Complemental strand, 6024254 - 6024202
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcg 254  Q
    |||| ||||| | |||||||| || ||||||||||||||||||||||||||||    
T  6024254 aggatttgaaaccgtgaccttccaatcacatgacaacaactttaccagttgcg 6024202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 17432368 - 17432332
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcaca 231  Q
    ||||| |||||||||||||||||||||||||||||||    
T  17432368 tgtttccaggacttgaacctgtgacctttcagtcaca 17432332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 23240928 - 23240971
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaa 237  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||    
T  23240928 ctgtttccaggacttgcacctgtgacctttcagtcacgtgacaa 23240971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 251
Target Start/End: Original strand, 27855544 - 27855601
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagtt 251  Q
    |||||||| |||||| |||  | ||| ||||||||||||||||| |||||||||||||    
T  27855544 ctgttttcgggacttaaactcgcgacatttcagtcacatgacaaaaactttaccagtt 27855601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 204 - 245
Target Start/End: Complemental strand, 32068115 - 32068074
Alignment:
Q  204 gacttgaacctgtgacctttcagtcacatgacaacaacttta 245  Q
    ||||||||| ||||||||||| ||||| ||||||||||||||    
T  32068115 gacttgaacatgtgacctttcggtcacgtgacaacaacttta 32068074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 253
Target Start/End: Complemental strand, 1941861 - 1941825
Alignment:
Q  217 gacctttcagtcacatgacaacaactttaccagttgc 253  Q
    |||||| |||||| |||||||||||||||||||||||    
T  1941861 gaccttccagtcagatgacaacaactttaccagttgc 1941825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 255
Target Start/End: Complemental strand, 22967199 - 22967139
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgc 255  Q
    ||||| || |||||||||  |||||||| |||||||||||||| ||||||| ||| |||||    
T  22967199 tgtttccatgacttgaactagtgaccttacagtcacatgacaataactttatcagatgcgc 22967139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 23821194 - 23821254
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgc 255  Q
    ||||| || |||||||||  |||||||| |||||||||||||| ||||||| ||| |||||    
T  23821194 tgtttccatgacttgaactagtgaccttacagtcacatgacaataactttatcagatgcgc 23821254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 38879610 - 38879548
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  38879610 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 38879548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 43334231 - 43334169
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43334231 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 43334169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 27328781 - 27328721
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcg 254  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27328781 ctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccaattgcg 27328721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 194 - 253
Target Start/End: Original strand, 37024660 - 37024719
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgc 253  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  37024660 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgc 37024719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 8170088 - 8170150
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  8170088 ctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccagttgcgcc 8170150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 24448919 - 24448857
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  24448919 ctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcc 24448857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 35710342 - 35710280
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  35710342 ctgtttccaggacttgaacccgtgacctttcagttacatgacaacaactttaccagttgcgcc 35710280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 41014348 - 41014286
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  41014348 ctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcc 41014286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 1565459 - 1565398
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    ||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  1565459 tgtttccaggacttgaacccgcgacctttcagtcacatgacaacaactttaccagttgcgcc 1565398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 256
Target Start/End: Original strand, 4619219 - 4619274
Alignment:
Q  201 caggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  4619219 caggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcc 4619274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 22187314 - 22187252
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| |||||||| |||| ||||||||||||||| |||||||||||||||| |||||||||    
T  22187314 ctgtttccaggacttaaaccggtgacctttcagtcaaatgacaacaactttactagttgcgcc 22187252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 23974808 - 23974748
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    ||||| ||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||    
T  23974808 tgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc-gttgcgcc 23974748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 30006353 - 30006292
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    ||||||| ||||||||| || ||||||||||||||||||||||||| |||| ||||||||||    
T  30006353 tgttttccggacttgaatctatgacctttcagtcacatgacaacaaatttatcagttgcgcc 30006292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 247
Target Start/End: Original strand, 209040 - 209086
Alignment:
Q  201 caggacttgaacctgtgacctttcagtcacatgacaacaactttacc 247  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||    
T  209040 caggacttgaacttgtgaccttttagtcacatgacaacaactttacc 209086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 252
Target Start/End: Original strand, 22861780 - 22861830
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttg 252  Q
    |||||||||| | ||||||||||||||||||||||||||||||| ||||||    
T  22861780 aggacttgaatccgtgacctttcagtcacatgacaacaactttatcagttg 22861830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 251
Target Start/End: Complemental strand, 22600482 - 22600426
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagtt 251  Q
    ||||| ||||||||||||| || ||||| ||||||||||| ||||||||||||||||    
T  22600482 tgtttccaggacttgaacccgtaaccttccagtcacatgataacaactttaccagtt 22600426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 39079882 - 39079933
Alignment:
Q  204 gacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||||||| |||||||||| |||||||||||||||||||||| ||||||||    
T  39079882 gacttgaacccgtgacctttctgtcacatgacaacaactttacc-gttgcgcc 39079933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 256
Target Start/End: Complemental strand, 39301142 - 39301091
Alignment:
Q  204 gacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||||||| ||||||||||||| ||||||||||||||||||| ||||||||    
T  39301142 gacttgaacccgtgacctttcagtaacatgacaacaactttacc-gttgcgcc 39301091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 202 - 253
Target Start/End: Complemental strand, 31299653 - 31299602
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgc 253  Q
    |||||||||||  ||||||| | |||||||||||||||||||||||||||||    
T  31299653 aggacttgaactagtgacctgtaagtcacatgacaacaactttaccagttgc 31299602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 17419943 - 17419881
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||  || ||||||||||||||| ||||||| |||||||||| ||||    
T  17419943 ctgtttccaggacttgaactcgtaacctttcagtcacattacaacaattttaccagttacgcc 17419881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 32703453 - 32703411
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgaca 236  Q
    |||||| ||||||||||||| ||||||||||||||||||||||    
T  32703453 ctgtttccaggacttgaacccgtgacctttcagtcacatgaca 32703411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 256
Target Start/End: Original strand, 12006457 - 12006498
Alignment:
Q  215 gtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    ||||||||||||||||||||||||||||| | ||||||||||    
T  12006457 gtgacctttcagtcacatgacaacaacttgagcagttgcgcc 12006498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 31694217 - 31694266
Alignment:
Q  197 ttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttac 246  Q
    |||||| ||||||||||| |||||| |||||||| |||||||||||||||    
T  31694217 ttttcaagacttgaacctatgacctatcagtcacgtgacaacaactttac 31694266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 1850660 - 1850624
Alignment:
Q  203 ggacttgaacctgtgacctttcagtcacatgacaaca 239  Q
    ||||||||||| |||||||||||||||||||||||||    
T  1850660 ggacttgaacccgtgacctttcagtcacatgacaaca 1850624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 28516541 - 28516593
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 247  Q
    ||||| || |||||||||| |||||||||||| ||| ||||||||||||||||    
T  28516541 tgtttccaagacttgaacccgtgacctttcagccacctgacaacaactttacc 28516593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 256
Target Start/End: Complemental strand, 2838787 - 2838745
Alignment:
Q  215 gtgaccttt-cagtcacatgacaacaactttaccagttgcgcc 256  Q
    ||||||||| |||||||||||||||||||||||| ||||||||    
T  2838787 gtgacctttacagtcacatgacaacaactttaccggttgcgcc 2838745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 240
Target Start/End: Original strand, 9794465 - 9794511
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaa 240  Q
    |||||||||||||||||||| |||||||||   ||||||||||||||    
T  9794465 ctgttttcaggacttgaacccgtgaccttttgatcacatgacaacaa 9794511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 256
Target Start/End: Original strand, 10634260 - 10634313
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    ||||||||||||  ||||||||||||||| |||||||||||| ||| ||||||||    
T  10634260 aggacttgaacccatgacctttcagtcacttgacaacaacttcacc-gttgcgcc 10634313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 240
Target Start/End: Complemental strand, 1405215 - 1405170
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaa 240  Q
    ||||| ||||||||||||| ||||||||  ||||||||||||||||    
T  1405215 tgtttccaggacttgaacccgtgaccttctagtcacatgacaacaa 1405170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 19143049 - 19143102
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacca 248  Q
    ||||| ||||||||||||||||| | ||| |||||| ||||||||| |||||||    
T  19143049 tgtttccaggacttgaacctgtggcattttagtcacgtgacaacaattttacca 19143102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 215 - 256
Target Start/End: Complemental strand, 19438757 - 19438716
Alignment:
Q  215 gtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||| |||| ||||| ||||||||||||||||||||||||||    
T  19438757 gtgatcttttagtcatatgacaacaactttaccagttgcgcc 19438716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 216 - 245
Target Start/End: Original strand, 28208235 - 28208264
Alignment:
Q  216 tgacctttcagtcacatgacaacaacttta 245  Q
    ||||||||||||||||||||||||||||||    
T  28208235 tgacctttcagtcacatgacaacaacttta 28208264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 31362454 - 31362495
Alignment:
Q  207 ttgaacctgtgacctttcagtcacatgacaacaactttacca 248  Q
    ||||||| |||||||| || ||||||||||||||||||||||    
T  31362454 ttgaacccgtgaccttccaatcacatgacaacaactttacca 31362495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 34074676 - 34074717
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatgacaacaactt 243  Q
    ||||||||||| ||||||||||||||||  ||||||||||||    
T  34074676 aggacttgaacttgtgacctttcagtcatgtgacaacaactt 34074717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 3771370 - 3771318
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttac 246  Q
    |||||| || ||||| ||||||||||||||||||||| ||| |||||| ||||    
T  3771370 ctgtttacatgacttaaacctgtgacctttcagtcacgtgagaacaacattac 3771318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 42924941 - 42924977
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcaca 231  Q
    ||||||||||||||||||  |||||||||||||||||    
T  42924941 tgttttcaggacttgaactcgtgacctttcagtcaca 42924977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 12024024 - 12024086
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  12024024 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 12024086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 14530347 - 14530285
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14530347 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 14530285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 8455422 - 8455484
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  8455422 ctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcc 8455484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 193 - 255
Target Start/End: Original strand, 26684727 - 26684789
Alignment:
Q  193 tctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgc 255  Q
    |||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||    
T  26684727 tctgttttcaggacttaaacctttgacctttcaatcacatgacaacaactttaccagttgcgc 26684789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 10543725 - 10543665
Alignment:
Q  196 gttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  10543725 gtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttatcagttgcgcc 10543665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 256
Target Start/End: Original strand, 21779372 - 21779427
Alignment:
Q  201 caggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  21779372 caggacttgaacccgtgacctttcagtcacatgacaacaacttcaccagttgcgcc 21779427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 253
Target Start/End: Complemental strand, 23397795 - 23397736
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgc 253  Q
    |||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  23397795 ctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgc 23397736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 253
Target Start/End: Original strand, 24200731 - 24200790
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgc 253  Q
    |||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  24200731 ctgtttccaggacttgaacccgtgacttttcagtcacatgacaacaactttaccagttgc 24200790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 11514465 - 11514403
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  11514465 ctgtttccaggagttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcc 11514403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 27573641 - 27573588
Alignment:
Q  203 ggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  27573641 ggacttgaaccaatgacctttcagtcacatgacaacaactttaccagttgcgcc 27573588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 25079834 - 25079886
Alignment:
Q  204 gacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  25079834 gacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcc 25079886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 251
Target Start/End: Complemental strand, 44604882 - 44604826
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagtt 251  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  44604882 tgtttccaggacttgaacctgtgaccttccagtcacatgacaacaactttagcagtt 44604826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 252
Target Start/End: Complemental strand, 17668024 - 17667973
Alignment:
Q  201 caggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttg 252  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  17668024 caggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttg 17667973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 252
Target Start/End: Complemental strand, 7214563 - 7214505
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttg 252  Q
    |||||| || ||||||||||  |||||||||||||||||||||||||||||||||||||    
T  7214563 ctgtttccaagacttgaacccatgacctttcagtcacatgacaacaactttaccagttg 7214505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 252
Target Start/End: Complemental strand, 22371086 - 22371028
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttg 252  Q
    |||||| ||||||||||||| |||||||  |||||||||||||||||||||||||||||    
T  22371086 ctgtttccaggacttgaacccgtgacctcccagtcacatgacaacaactttaccagttg 22371028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 25249843 - 25249905
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| || |||||||||| |||||||| ||||||||||||||||||||||||| |||||||    
T  25249843 ctgtttccatgacttgaacccgtgaccttacagtcacatgacaacaactttaccaattgcgcc 25249905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 17705522 - 17705465
Alignment:
Q  196 gttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgc 253  Q
    |||| ||||||||||||| ||||||||  |||||||||||||||||||||||||||||    
T  17705522 gtttccaggacttgaacccgtgaccttctagtcacatgacaacaactttaccagttgc 17705465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 254
Target Start/End: Complemental strand, 17896280 - 17896228
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcg 254  Q
    |||||||||| | |||||||||| |||||||||||||||||||||||||||||    
T  17896280 aggacttgaatccgtgacctttcggtcacatgacaacaactttaccagttgcg 17896228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 35017847 - 35017785
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttc-agtcacatgacaacaactttaccagttgcgcc 256  Q
    ||||||||||||||| |||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  35017847 ctgttttcaggacttaaacccgtgacctttcaagtcacatgacaacaactttacc-gttgcgcc 35017785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 5450313 - 5450263
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttta 245  Q
    ||||| ||||| ||||||| |||||||||||||||||||||||||||||||    
T  5450313 tgtttccaggaattgaacccgtgacctttcagtcacatgacaacaacttta 5450263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 14544092 - 14544030
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||| || || |||||| ||||||||||||||||||||||||||||||| |||||||    
T  14544092 ctgtttccagtacctggacctgtaacctttcagtcacatgacaacaactttaccaattgcgcc 14544030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 252
Target Start/End: Complemental strand, 17623585 - 17623535
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttg 252  Q
    |||||||||||| |||||||| ||||| |||||||||||||||||||||||    
T  17623585 aggacttgaacccgtgaccttccagtcgcatgacaacaactttaccagttg 17623535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 19977820 - 19977882
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||| ||||||||| |||||||||| |||||||||||||||||| ||||||| ||||    
T  19977820 ctgtttccagaacttgaacccgtgacctttcggtcacatgacaacaacttcaccagttccgcc 19977882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 39914413 - 39914474
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    ||||| ||| |||||| || |||||||| |||||||||||||||||||||||||| ||||||    
T  39914413 tgtttccagtacttgatcccgtgaccttccagtcacatgacaacaactttaccagatgcgcc 39914474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 40416978 - 40417031
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacca 248  Q
    ||||| || |||||||||| |||||||| |||||||||||||||||||||||||    
T  40416978 tgtttccatgacttgaacccgtgaccttccagtcacatgacaacaactttacca 40417031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 246
Target Start/End: Original strand, 99377 - 99421
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatgacaacaactttac 246  Q
    |||||||||||| |||||||||||||||| |||||||||||||||    
T  99377 aggacttgaacccgtgacctttcagtcacgtgacaacaactttac 99421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 238
Target Start/End: Complemental strand, 25641531 - 25641487
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaac 238  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||    
T  25641531 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaac 25641487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 27466262 - 27466298
Alignment:
Q  220 ctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||||||||||||||||||||||||||||||||||    
T  27466262 ctttcagtcacatgacaacaactttaccagttgcgcc 27466298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 202 - 245
Target Start/End: Complemental strand, 5841049 - 5841006
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatgacaacaacttta 245  Q
    |||||||||||| |||||||| ||||||||||||||||||||||    
T  5841049 aggacttgaacccgtgaccttccagtcacatgacaacaacttta 5841006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 9671210 - 9671147
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttc-agtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||| ||||||| ||||| |||| ||||||||||||||||||||||| ||||||||    
T  9671210 ctgtttccaggatttgaacccgtgacatttccagtcacatgacaacaactttaccggttgcgcc 9671147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 23145803 - 23145857
Alignment:
Q  193 tctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 247  Q
    |||||||||| |||||||||| ||||||||||||||||   ||||||||||||||    
T  23145803 tctgttttcaagacttgaacccgtgacctttcagtcacgctacaacaactttacc 23145857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 23557593 - 23557647
Alignment:
Q  193 tctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 247  Q
    |||||||||| |||||||||| ||||||||||||||||   ||||||||||||||    
T  23557593 tctgttttcaagacttgaacccgtgacctttcagtcacgctacaacaactttacc 23557647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 24860093 - 24860154
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    ||||| |||| ||| |||| || ||||| ||||||||||||||||| |||||||||||||||    
T  24860093 tgtttccagggcttaaacccgtaaccttccagtcacatgacaacaattttaccagttgcgcc 24860154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 256
Target Start/End: Original strand, 39189556 - 39189589
Alignment:
Q  223 tcagtcacatgacaacaactttaccagttgcgcc 256  Q
    ||||||||||||||||||||||||||||||||||    
T  39189556 tcagtcacatgacaacaactttaccagttgcgcc 39189589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 17380343 - 17380391
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactt 243  Q
    ||||| || |||||||||| |||||||||| ||||||||||||||||||    
T  17380343 tgtttccaagacttgaacccgtgacctttcggtcacatgacaacaactt 17380391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 29419996 - 29420048
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 247  Q
    ||||| ||||||||||||  |||||||||||||||  ||||||||||||||||    
T  29419996 tgtttccaggacttgaactcgtgacctttcagtcatgtgacaacaactttacc 29420048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 247
Target Start/End: Complemental strand, 33795305 - 33795261
Alignment:
Q  203 ggacttgaacctgtgacctttcagtcacatgacaacaactttacc 247  Q
    ||||||||||| ||||||||||| |||| ||||||||||||||||    
T  33795305 ggacttgaacccgtgacctttcaatcacgtgacaacaactttacc 33795261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 4516468 - 4516518
Alignment:
Q  205 acttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||||  ||||||||||||||||| |||||||||||||||| ||||||||    
T  4516468 acttgaatatgtgacctttcagtcacgtgacaacaactttacc-gttgcgcc 4516518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 247
Target Start/End: Original strand, 21377189 - 21377232
Alignment:
Q  204 gacttgaacctgtgacctttcagtcacatgacaacaactttacc 247  Q
    |||||||||  || ||||||||||||||||||||||||||||||    
T  21377189 gacttgaactcgtaacctttcagtcacatgacaacaactttacc 21377232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 31158547 - 31158598
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttta 245  Q
    ||||||| | ||||| ||||  ||||||||||||||||||||||||||||||    
T  31158547 ctgttttgaagactttaacccttgacctttcagtcacatgacaacaacttta 31158598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 10546190 - 10546153
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacat 232  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  10546190 tgtttccaggacttgaacccgtgacctttcagtcacat 10546153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 4795782 - 4795730
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttac 246  Q
    ||||||||| ||||| |||  ||||| |||||||||| |||||||||||||||    
T  4795782 ctgttttcaagacttcaacaagtgacttttcagtcacgtgacaacaactttac 4795730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 19615013 - 19614981
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatga 234  Q
    |||||||||||| ||||||||||||||||||||    
T  19615013 aggacttgaacccgtgacctttcagtcacatga 19614981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 246
Target Start/End: Original strand, 45235932 - 45235976
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatgacaacaactttac 246  Q
    |||||||||||  |||| ||||||||||||||| |||||||||||    
T  45235932 aggacttgaactcgtgatctttcagtcacatgagaacaactttac 45235976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 53; Significance: 2e-21; HSPs: 4)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 10154 - 10214
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcg 254  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10154 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcg 10214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 20482 - 20542
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcg 254  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  20482 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcg 20542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 256
Target Start/End: Complemental strand, 8964 - 8912
Alignment:
Q  204 gacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||||||||||||| ||||||||||||||||||||||| ||| ||||||||    
T  8964 gacttgaacctgtgacatttcagtcacatgacaacaacttcaccggttgcgcc 8912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 256
Target Start/End: Complemental strand, 19292 - 19240
Alignment:
Q  204 gacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||||||||||||| ||||||||||||||||||||||| ||| ||||||||    
T  19292 gacttgaacctgtgacatttcagtcacatgacaacaacttcaccggttgcgcc 19240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 13129 - 13191
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  13129 ctgtttccaggacttgaaccggtgacctttcagtcacatgacaacaactttaccggttgcgcc 13191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 1692 - 1751
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcg 254  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||    
T  1692 tgttttcaggacttgaacccatgacctttcagtcacatgacaacaactttaccaattgcg 1751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 256
Target Start/End: Original strand, 226520 - 226574
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  226520 aggacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 226574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 83903 - 83842
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    ||||| || |||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  83903 tgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttactagttgcgcc 83842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 255
Target Start/End: Complemental strand, 4185 - 4125
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgc 255  Q
    ||||| ||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||    
T  4185 tgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttactagttgcgc 4125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 24883 - 24935
Alignment:
Q  204 gacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  24883 gacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcgcc 24935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 46859 - 46798
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    ||||| ||| ||||||||| ||||||||  |||||||||||||||||||||||| |||||||    
T  46859 tgtttccagcacttgaacccgtgaccttctagtcacatgacaacaactttaccaattgcgcc 46798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 246
Target Start/End: Original strand, 46996 - 47041
Alignment:
Q  201 caggacttgaacctgtgacctttcagtcacatgacaacaactttac 246  Q
    ||||||||||||  |||||||||||||||| |||||||||||||||    
T  46996 caggacttgaactcgtgacctttcagtcacctgacaacaactttac 47041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 253
Target Start/End: Complemental strand, 59006 - 58947
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgc 253  Q
    |||||| ||||||||||||| ||||||||||||||||||||||| || ||||||||||||    
T  59006 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaataagtttaccagttgc 58947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 10838 - 10780
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgc 253  Q
    |||||||||  |||||||| |||||||| ||||||||||||||||||||||||||||||    
T  10838 tgttttcagaccttgaacccgtgaccttccagtcacatgacaacaactttaccagttgc 10780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 11160 - 11099
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 256  Q
    |||||| ||||||||||||| |||||||||||||||||| | |||||||||||||||||||||    
T  11160 ctgtttccaggacttgaacccgtgacctttcagtcacat-agaacaactttaccagttgcgcc 11099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 8919 - 8865
Alignment:
Q  195 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccag 249  Q
    ||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  8919 tgtttccaggaattgaacctgtgaccttacagtcacatgacaacaactttaccag 8865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 253
Target Start/End: Original strand, 35124 - 35184
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaa-caactttaccagttgc 253  Q
    |||||||||||||||||||| |||||||| ||||||||||||||  |||||||||||||||    
T  35124 ctgttttcaggacttgaacccgtgaccttacagtcacatgacaataaactttaccagttgc 35184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 24693 - 24642
Alignment:
Q  194 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttta 245  Q
    |||||| ||||||||||||| |||||||| ||||||| ||||||||||||||    
T  24693 ctgtttccaggacttgaacccgtgaccttacagtcacttgacaacaacttta 24642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 255
Target Start/End: Complemental strand, 43150 - 43097
Alignment:
Q  202 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgc 255  Q
    ||||| |||||  ||||||||||| ||||||||||| |||||||||||||||||    
T  43150 aggacctgaactcgtgacctttcaatcacatgacaataactttaccagttgcgc 43097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 256
Target Start/End: Original strand, 73001 - 73029
Alignment:
Q  228 cacatgacaacaactttaccagttgcgcc 256  Q
    |||||||||||||||||||||||||||||    
T  73001 cacatgacaacaactttaccagttgcgcc 73029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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