View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0050_low_5 (Length: 224)
Name: NF0050_low_5
Description: NF0050
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0050_low_5 |
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Alignment Details
Target: chr2 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 33638784 - 33638932
Alignment:
| Q |
1 |
ctccatgggttgaatgatcagtatagcaatgtctaacatacggaagacaaatcttcaaccacaaatggttaaaatgtattcctatgtcgtacaacatgac |
100 |
Q |
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| T |
33638784 |
ctccatgggctgaatgatcagtatagcaatgtctaacatacggaagacaaatcctcaaccacaaatggttaaaatgttttcctatgtcgtacagcatgac |
33638883 |
T |
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| Q |
101 |
tcggaattcaaagctaatgcaatcagtgttttcttctacagcaacagct |
149 |
Q |
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| T |
33638884 |
ttggaattcaaagctaatgcaatcagttttttcttctacagcaacagct |
33638932 |
T |
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