View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0052_low_15 (Length: 271)
Name: NF0052_low_15
Description: NF0052
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0052_low_15 |
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Alignment Details
Target: chr4 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 44 - 240
Target Start/End: Original strand, 38328549 - 38328745
Alignment:
| Q |
44 |
tcatcattctactgtcgagttcccaaaactctagaacactgcggtaaaaatgactagtaccatacctttccatattgttcttccaaggatggtgcatgat |
143 |
Q |
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| T |
38328549 |
tcatcattctactgtcgagttcccaaaactctagaacactgcggtaaaaatgactagtaccatacctttccatattgttcttccaaggatggtgcatgat |
38328648 |
T |
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| Q |
144 |
cttctgctttcaattaatctgtttttcttattacttactgatatttagattgagttgtttctgtaacaggttggtggcttgggggatgttgtctgtg |
240 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38328649 |
cttctgctttcaattaatctgtttttcttattacttactgatatttagattgagttgtttctgtaacaggttggtggcttgggggatgttgtctgtg |
38328745 |
T |
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