View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0052_low_18 (Length: 262)
Name: NF0052_low_18
Description: NF0052
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0052_low_18 |
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Alignment Details
Target: chr3 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 63 - 177
Target Start/End: Original strand, 44840624 - 44840736
Alignment:
| Q |
63 |
cagcaaatccaccaatatacagagaaatgttaacctaatgaagcaggtatacatatacacacactcaaaaaggggcatcataatcaacacttggttacga |
162 |
Q |
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| T |
44840624 |
cagcaaatccaccaatatacagagaaatgttaacctaatgaagcaagtatacatat--acacactcaaaaaggggcattataatcaacacttggttacga |
44840721 |
T |
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| Q |
163 |
actcagacagaacac |
177 |
Q |
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||||||||||||||| |
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| T |
44840722 |
actcagacagaacac |
44840736 |
T |
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