View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0054-Insertion-2 (Length: 1090)

Name: NF0054-Insertion-2
Description: NF0054
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0054-Insertion-2
NF0054-Insertion-2
[»] chr3 (25 HSPs)
chr3 (9-544)||(36790530-36791090)
chr3 (555-674)||(36791864-36791983)
chr3 (671-951)||(36792164-36792444)
chr3 (211-337)||(1923138-1923261)
chr3 (224-337)||(46194151-46194265)
chr3 (355-403)||(36790826-36790874)
chr3 (230-339)||(38600757-38600867)
chr3 (242-329)||(24618890-24618979)
chr3 (257-337)||(1334758-1334840)
chr3 (452-499)||(46194329-46194376)
chr3 (268-337)||(51165000-51165069)
chr3 (283-330)||(36790899-36790946)
chr3 (250-337)||(53754034-53754123)
chr3 (458-499)||(42547235-42547276)
chr3 (268-337)||(54021448-54021517)
chr3 (356-396)||(1923145-1923185)
chr3 (452-488)||(49122225-49122261)
chr3 (456-499)||(30261629-30261672)
chr3 (861-908)||(36785232-36785279)
chr3 (243-329)||(36315698-36315784)
chr3 (355-392)||(1334797-1334834)
chr3 (458-499)||(39329879-39329920)
chr3 (452-485)||(41031523-41031556)
chr3 (243-337)||(48409632-48409729)
chr3 (355-392)||(51165006-51165043)
[»] chr1 (56 HSPs)
chr1 (224-334)||(26583779-26583891)
chr1 (211-337)||(3160618-3160747)
chr1 (217-339)||(26924057-26924182)
chr1 (224-337)||(29756087-29756202)
chr1 (226-339)||(24131349-24131462)
chr1 (217-337)||(40754351-40754473)
chr1 (226-339)||(5503466-5503579)
chr1 (257-337)||(31798466-31798546)
chr1 (229-337)||(46363360-46363471)
chr1 (226-337)||(37541060-37541173)
chr1 (226-324)||(26760337-26760437)
chr1 (268-337)||(27932824-27932893)
chr1 (209-337)||(37925171-37925306)
chr1 (257-337)||(44580564-44580644)
chr1 (452-499)||(26760094-26760141)
chr1 (356-403)||(26924126-26924173)
chr1 (452-499)||(26924393-26924440)
chr1 (356-403)||(29756148-29756195)
chr1 (452-499)||(29756268-29756315)
chr1 (230-328)||(14090697-14090793)
chr1 (251-337)||(37495877-37495963)
chr1 (231-329)||(50773301-50773398)
chr1 (230-337)||(50926795-50926904)
chr1 (452-488)||(1859455-1859491)
chr1 (454-490)||(44580462-44580498)
chr1 (356-403)||(26583783-26583830)
chr1 (251-335)||(27209939-27210025)
chr1 (250-330)||(28706594-28706676)
chr1 (356-403)||(31798473-31798520)
chr1 (453-487)||(18186330-18186364)
chr1 (244-337)||(37280967-37281057)
chr1 (243-329)||(16956599-16956687)
chr1 (231-339)||(21304760-21304868)
chr1 (268-337)||(33149321-33149390)
chr1 (252-337)||(2219421-2219508)
chr1 (356-396)||(24131413-24131453)
chr1 (452-496)||(24131524-24131568)
chr1 (452-488)||(26583676-26583712)
chr1 (356-403)||(40754418-40754466)
chr1 (356-392)||(46363428-46363464)
chr1 (452-488)||(52146784-52146820)
chr1 (243-339)||(705313-705411)
chr1 (452-499)||(2886108-2886155)
chr1 (294-337)||(2886219-2886262)
chr1 (356-403)||(3160693-3160740)
chr1 (356-403)||(27932839-27932886)
chr1 (257-337)||(29225386-29225468)
chr1 (250-337)||(49662730-49662816)
chr1 (356-394)||(2886226-2886264)
chr1 (361-395)||(5503480-5503514)
chr1 (268-337)||(4466145-4466214)
chr1 (452-485)||(6784954-6784987)
chr1 (452-485)||(27698763-27698796)
chr1 (268-329)||(36232780-36232841)
chr1 (230-279)||(37525146-37525194)
chr1 (355-392)||(37541130-37541167)
[»] chr4 (44 HSPs)
chr4 (211-335)||(28330844-28330971)
chr4 (211-337)||(20964218-20964347)
chr4 (233-337)||(38319959-38320065)
chr4 (231-337)||(53848694-53848802)
chr4 (225-337)||(42132861-42132977)
chr4 (211-337)||(32949778-32949908)
chr4 (224-339)||(49218727-49218843)
chr4 (229-337)||(8759827-8759937)
chr4 (250-339)||(13719821-13719912)
chr4 (222-337)||(22020454-22020569)
chr4 (244-337)||(39052866-39052960)
chr4 (244-337)||(48400596-48400690)
chr4 (356-403)||(28330849-28330896)
chr4 (452-499)||(36047224-36047271)
chr4 (356-403)||(38319966-38320013)
chr4 (452-499)||(42738455-42738502)
chr4 (452-489)||(38319858-38319895)
chr4 (251-328)||(34790922-34791001)
chr4 (452-499)||(20964417-20964464)
chr4 (270-337)||(36047092-36047159)
chr4 (452-499)||(54217279-54217326)
chr4 (226-313)||(54217441-54217532)
chr4 (251-337)||(35998088-35998176)
chr4 (251-337)||(42051627-42051715)
chr4 (452-485)||(49218906-49218939)
chr4 (452-488)||(5291637-5291673)
chr4 (452-488)||(28330740-28330776)
chr4 (452-488)||(47386107-47386143)
chr4 (452-487)||(388543-388578)
chr4 (452-499)||(32949974-32950021)
chr4 (452-499)||(51572350-51572397)
chr4 (452-487)||(53848281-53848316)
chr4 (356-403)||(53848701-53848748)
chr4 (452-490)||(37316045-37316083)
chr4 (356-398)||(42132868-42132910)
chr4 (300-337)||(11583893-11583930)
chr4 (355-392)||(32949865-32949902)
chr4 (454-487)||(35029222-35029255)
chr4 (356-393)||(36047115-36047152)
chr4 (268-337)||(37315912-37315981)
chr4 (355-392)||(39052917-39052954)
chr4 (355-392)||(48400647-48400684)
chr4 (452-485)||(48400753-48400786)
chr4 (229-278)||(49812338-49812386)
[»] scaffold0155 (1 HSPs)
scaffold0155 (224-318)||(7866-7960)
[»] chr5 (38 HSPs)
chr5 (211-337)||(31090352-31090481)
chr5 (226-337)||(5147443-5147556)
chr5 (224-337)||(13016309-13016423)
chr5 (224-337)||(13087687-13087801)
chr5 (211-337)||(38978952-38979081)
chr5 (226-337)||(42818951-42819064)
chr5 (211-337)||(4194980-4195110)
chr5 (226-337)||(39060898-39061014)
chr5 (230-337)||(15564844-15564948)
chr5 (452-489)||(13016488-13016525)
chr5 (268-337)||(15898239-15898308)
chr5 (358-403)||(31090361-31090406)
chr5 (293-337)||(7871361-7871405)
chr5 (452-488)||(13087866-13087902)
chr5 (452-488)||(20369223-20369259)
chr5 (452-499)||(4194577-4194624)
chr5 (356-403)||(5147502-5147549)
chr5 (452-499)||(9426677-9426724)
chr5 (452-499)||(13597966-13598013)
chr5 (452-499)||(39061078-39061125)
chr5 (452-490)||(15898138-15898176)
chr5 (355-392)||(7871367-7871404)
chr5 (243-279)||(39212519-39212555)
chr5 (456-499)||(72233-72276)
chr5 (251-337)||(4044450-4044537)
chr5 (356-403)||(4194987-4195034)
chr5 (230-337)||(25111101-25111208)
chr5 (230-337)||(25170192-25170299)
chr5 (452-499)||(34534861-34534908)
chr5 (243-277)||(6629360-6629394)
chr5 (250-339)||(17741142-17741232)
chr5 (452-498)||(31090242-31090288)
chr5 (230-337)||(39060374-39060482)
chr5 (355-392)||(4044494-4044531)
chr5 (452-485)||(4044600-4044633)
chr5 (230-339)||(25108619-25108728)
chr5 (230-339)||(25167711-25167820)
chr5 (244-337)||(36006861-36006952)
[»] chr2 (33 HSPs)
chr2 (226-337)||(13222116-13222229)
chr2 (211-334)||(928469-928594)
chr2 (226-337)||(6972487-6972599)
chr2 (226-337)||(314475-314588)
chr2 (244-336)||(7213524-7213617)
chr2 (226-334)||(43427033-43427142)
chr2 (356-403)||(13222123-13222170)
chr2 (226-337)||(2048340-2048452)
chr2 (230-337)||(9724926-9725034)
chr2 (268-337)||(31348559-31348628)
chr2 (246-330)||(14890372-14890455)
chr2 (243-337)||(38280160-38280255)
chr2 (452-499)||(314372-314419)
chr2 (356-403)||(314482-314529)
chr2 (356-403)||(928543-928590)
chr2 (356-403)||(6972545-6972592)
chr2 (452-499)||(31348448-31348495)
chr2 (356-403)||(31348566-31348613)
chr2 (456-499)||(31592488-31592531)
chr2 (452-487)||(43427486-43427521)
chr2 (230-337)||(2427408-2427517)
chr2 (251-337)||(18460536-18460624)
chr2 (452-488)||(3199841-3199877)
chr2 (452-499)||(6972667-6972714)
chr2 (452-499)||(13222006-13222052)
chr2 (452-498)||(9724819-9724865)
chr2 (356-393)||(2048347-2048384)
chr2 (355-396)||(4283031-4283072)
chr2 (452-485)||(8385027-8385060)
chr2 (355-392)||(9724932-9724969)
chr2 (231-337)||(12949916-12950023)
chr2 (452-485)||(15859465-15859498)
chr2 (244-330)||(43182327-43182414)
[»] chr8 (44 HSPs)
chr8 (228-337)||(9734117-9734226)
chr8 (217-337)||(25174521-25174644)
chr8 (211-337)||(14690008-14690137)
chr8 (224-330)||(32231330-32231438)
chr8 (211-337)||(14748634-14748765)
chr8 (230-337)||(45420889-45420998)
chr8 (231-337)||(33743824-33743932)
chr8 (230-337)||(1494198-1494307)
chr8 (224-337)||(886392-886507)
chr8 (226-332)||(8566060-8566170)
chr8 (229-337)||(8394202-8394314)
chr8 (251-337)||(40077721-40077809)
chr8 (355-403)||(32231391-32231439)
chr8 (243-337)||(8418269-8418361)
chr8 (452-499)||(8566529-8566576)
chr8 (251-336)||(14117511-14117598)
chr8 (452-499)||(14689897-14689944)
chr8 (251-339)||(29638347-29638437)
chr8 (452-499)||(32231843-32231890)
chr8 (452-490)||(886571-886609)
chr8 (244-337)||(41726569-41726661)
chr8 (452-499)||(13085074-13085121)
chr8 (452-499)||(17790220-17790267)
chr8 (452-499)||(33743712-33743759)
chr8 (452-499)||(43845007-43845054)
chr8 (453-499)||(8394642-8394688)
chr8 (356-393)||(9734182-9734219)
chr8 (284-337)||(32679083-32679136)
chr8 (268-337)||(41759620-41759689)
chr8 (452-488)||(2796987-2797023)
chr8 (355-403)||(14117516-14117564)
chr8 (296-336)||(37459399-37459439)
chr8 (356-403)||(1494253-1494300)
chr8 (452-499)||(9734481-9734528)
chr8 (356-403)||(14690015-14690062)
chr8 (356-403)||(14748711-14748758)
chr8 (257-337)||(39998211-39998293)
chr8 (452-499)||(45421063-45421110)
chr8 (268-330)||(28791363-28791425)
chr8 (356-390)||(37459405-37459439)
chr8 (231-288)||(15020866-15020922)
chr8 (452-485)||(22325078-22325111)
chr8 (452-485)||(33826186-33826219)
chr8 (452-481)||(41726476-41726505)
[»] chr7 (29 HSPs)
chr7 (229-337)||(23111038-23111148)
chr7 (226-337)||(32971964-32972077)
chr7 (230-337)||(47238265-47238374)
chr7 (212-339)||(29996960-29997090)
chr7 (230-337)||(37264361-37264468)
chr7 (230-337)||(32776031-32776140)
chr7 (244-337)||(36070153-36070247)
chr7 (246-337)||(10355701-10355794)
chr7 (251-337)||(39343644-39343730)
chr7 (268-337)||(38589782-38589851)
chr7 (355-396)||(38589788-38589829)
chr7 (452-488)||(40023849-40023885)
chr7 (452-499)||(32972393-32972440)
chr7 (356-403)||(47238272-47238319)
chr7 (452-490)||(32345546-32345584)
chr7 (452-535)||(47238120-47238202)
chr7 (243-337)||(2849303-2849398)
chr7 (355-392)||(23111105-23111142)
chr7 (268-337)||(45218148-45218217)
chr7 (242-339)||(21446482-21446581)
chr7 (283-339)||(27337878-27337934)
chr7 (452-488)||(37264261-37264297)
chr7 (356-403)||(32972023-32972070)
chr7 (247-329)||(6838118-6838200)
chr7 (251-337)||(24288471-24288557)
chr7 (458-499)||(3668006-3668047)
chr7 (452-485)||(6591664-6591697)
chr7 (455-488)||(27621782-27621815)
chr7 (229-327)||(27621895-27621995)
[»] chr6 (14 HSPs)
chr6 (211-337)||(15325195-15325323)
chr6 (211-337)||(15371794-15371922)
chr6 (250-336)||(3874020-3874108)
chr6 (224-333)||(15351328-15351438)
chr6 (452-499)||(4552839-4552886)
chr6 (242-337)||(15355623-15355719)
chr6 (230-334)||(34803655-34803763)
chr6 (250-337)||(3166078-3166167)
chr6 (357-393)||(15355631-15355667)
chr6 (244-327)||(178949-179031)
chr6 (452-499)||(33921592-33921639)
chr6 (452-490)||(2310411-2310449)
chr6 (356-394)||(15325202-15325240)
chr6 (356-393)||(15371878-15371915)
[»] scaffold0221 (2 HSPs)
scaffold0221 (230-337)||(10740-10850)
scaffold0221 (356-403)||(10796-10843)
[»] scaffold0576 (2 HSPs)
scaffold0576 (242-337)||(613-709)
scaffold0576 (357-393)||(621-657)
[»] scaffold0086 (1 HSPs)
scaffold0086 (251-337)||(5866-5952)
[»] scaffold0003 (1 HSPs)
scaffold0003 (251-337)||(352434-352520)
[»] scaffold0007 (1 HSPs)
scaffold0007 (452-488)||(157975-158011)
[»] scaffold0262 (1 HSPs)
scaffold0262 (230-337)||(12386-12495)


Alignment Details
Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 9 - 544
Target Start/End: Original strand, 36790530 - 36791090
Alignment:
Q  9 taaggatggtaaaatcgtcgaagatggaatctacggatatgcataattgcatattacctttgttccggatttact------------gggaataacattc 96  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            |||||||||||||    
T  36790530 taaggatggtaaaatcgtcgaagatggaatctacggatatgcataattgcatattacctttgttccggatttactaagtttattaatgggaataacattc 36790629  T
Q  97 cttnnnnnnnnnnnnncaccatatctaatcaaattagattattataagatgtagaag--nnnnnnnnnntgca--------ccaaaatcacnnnnnnnaa 186  Q
     ||             ||||||||||||||||||||||||||||||||||| |||||            ||||        ||||||||||       ||    
T  36790630 attaaaaaaaaaaa--caccatatctaatcaaattagattattataagatgaagaagaagaaaaaaatatgcagaatatccccaaaatcactttttttaa 36790727  T
Q  187 tggtaaatgttactccttccacttcatttaaactgagccttgactcatttcgcatttattaagaaaaattgtataaatgaa--agagagaaaaatgagtt 284  Q
    ||||||||||||||||||||||  ||||| ||||||||||||||||||||  |||||||||| ||||||||||||| ||||  |||||||||||||||||    
T  36790728 tggtaaatgttactccttccaccccattttaactgagccttgactcattttacatttattaaaaaaaattgtataagtgaaagagagagaaaaatgagtt 36790827  T
Q  285 tgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagtatacaccaatannnnnnnacatttatgataaagaagaatacaccaata 384  Q
    |||||||  |||||||||||||||||||| |||||||||||||||| ||||||||||||||||       ||||||||||||||||||||||||||||||    
T  36790828 tgagcgcacttatcaactattggtgtattcttctttatcataaatgtaaagtatacaccaatatttttttacatttatgataaagaagaatacaccaata 36790927  T
Q  385 gttgataagggcgctcaaatattattactagaagtgggacaataattggaaagtagt-nnnnnnnnnnttaatattgtattgaaaagtgaaatgagtcaa 483  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||    
T  36790928 gttgataagagcgctcaaatattattactagaagtgggacaataattggaaagtagtaaaaaaagtaattaatattgtattgaaaagtgaaatgagtcaa 36791027  T
Q  484 tttttctcggacaata--nnnnnnnngcaaatggctaaattattatgggacggaagagtaata 544  Q
    |||||||| |||||||          |||||||||||| ||| ||||||||||||||||||||    
T  36791028 tttttctcagacaatattttttttttgcaaatggctaagttaatatgggacggaagagtaata 36791090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 555 - 674
Target Start/End: Original strand, 36791864 - 36791983
Alignment:
Q  555 atcaaaacttgaattttggatctttaactcctcaacttctttaaactctttgctcaaatcagttgagctatgtaaccccatgatgaaataaactccaaaa 654  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  36791864 atcaaaacttaaattttggatcttgaactcctcaacttctttaaactctttgctcaaatcagttgagctatataaccccatgatgaaataaactccaaaa 36791963  T
Q  655 tcacttacaatgatttatga 674  Q
    ||||||||||||||||||||    
T  36791964 tcacttacaatgatttatga 36791983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 671 - 951
Target Start/End: Original strand, 36792164 - 36792444
Alignment:
Q  671 atgaccatatcattttgacatttgatttatcgcgagatttttgttaatgaaattgtcataatcgtcnnnnnnnnnnnnnnnggaatgaaatacccctgtt 770  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||               |||||||||||||||||||    
T  36792164 atgaccatatcatcttgacatttgatttatcgcgagatttttgttaatgaaattgtctttatcgtcaaaaaaataaaaaaaggaatgaaatacccctgtt 36792263  T
Q  771 tagagaagttaaaatgaatagaattttttgttaacaaaagnnnnnnnntttgttatttctttttctgtgcannnnnnnnnnnnnnnnnnngcaataaatt 870  Q
     |||||||||||||||||||||||||||||||||||||||        |||||| ||||||||||||||||                   ||||||||||    
T  36792264 cagagaagttaaaatgaatagaattttttgttaacaaaagaaaaaaaatttgtt-tttctttttctgtgcatttttttttattttttt--gcaataaatt 36792360  T
Q  871 gtcaaatatttcacccacgttgcatgtctatgctcttataaactcgtgcc--aaaaattgccacta-tttgttttctacttttt 951  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||| |||||||||||||||||    
T  36792361 gtcaaatatttcacccacgttgcatgtctatgctcttataaactcgtgccaaaaaaatttccactattttgttttctacttttt 36792444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 211 - 337
Target Start/End: Complemental strand, 1923261 - 1923138
Alignment:
Q  211 catttaaactgagccttgactcatttcgcatttattaagaaaaattgtataaatgaaagagagaaaaatgagtttgagcgcctttatcaactattggtgt 310  Q
    ||||| ||||||||| |  |||||||| || ||||||||||||| ||||||| ||||| ||||||||||| ||||  | ||| ||||||||| ||||||     
T  1923261 cattttaactgagcccttgctcatttcacacttattaagaaaaagtgtataagtgaaaaagagaaaaatg-gttt--gtgcccttatcaactgttggtgc 1923165  T
Q  311 attattctttatcataaatgcaaagta 337  Q
    ||| |||||||||||||||||||||||    
T  1923164 attcttctttatcataaatgcaaagta 1923138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 224 - 337
Target Start/End: Original strand, 46194151 - 46194265
Alignment:
Q  224 ccttgactcatttcgcatttattaagaaaaattgtataaatgaa--agagagaaaaatgagtttgagcgcctttatcaactattggtgtattattcttta 321  Q
    |||||||| ||||| || ||||||||||||| ||||||| | ||  ||||||||||||| ||||||| ||| ||||||||| |||||| |||  ||||||    
T  46194151 ccttgactaatttcacacttattaagaaaaagtgtataagttaaagagagagaaaaatgggtttgagtgcccttatcaactgttggtgcatt-ctcttta 46194249  T
Q  322 tcataaatgcaaagta 337  Q
    ||||||||||||||||    
T  46194250 tcataaatgcaaagta 46194265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 355 - 403
Target Start/End: Complemental strand, 36790874 - 36790826
Alignment:
Q  355 acatttatgataaagaagaatacaccaatagttgataagggcgctcaaa 403  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  36790874 acatttatgataaagaagaatacaccaatagttgataagtgcgctcaaa 36790826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 230 - 339
Target Start/End: Original strand, 38600757 - 38600867
Alignment:
Q  230 ctcatttcgcatttattaagaaaaattgtataaatgaaa--gagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataa 327  Q
    |||||||||||   |||||||||| | ||||||||||||  ||||||||||||| ||||||  |||||||||| |||||||| ||| ||||||| |||||    
T  38600757 ctcatttcgcacagattaagaaaagt-gtataaatgaaaaagagagaaaaatgattttgagtccctttatcaagtattggtgcattcttctttaccataa 38600855  T
Q  328 atgcaaagtata 339  Q
    ||| ||||||||    
T  38600856 atgtaaagtata 38600867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 242 - 329
Target Start/End: Original strand, 24618890 - 24618979
Alignment:
Q  242 ttattaagaaaaattgtataaatgaaag--agagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaat 329  Q
    ||||||||||||| ||||||| ||||||  |||||||||||  ||| || |||||||||||||| ||||||||| ||||||| |||||||    
T  24618890 ttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaagtgcctttatcaactagtggtgtattcttctttagcataaat 24618979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 257 - 337
Target Start/End: Original strand, 1334758 - 1334840
Alignment:
Q  257 gtataaatgaaagag--agaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    |||||||||||||||  |||||||| | |||||  ||||||||||| |||||||| ||| |||||||||||||||| ||||||    
T  1334758 gtataaatgaaagagagagaaaaataattttgaatgcctttatcaagtattggtgcattcttctttatcataaatgtaaagta 1334840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 452 - 499
Target Start/End: Original strand, 46194329 - 46194376
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||    
T  46194329 ttaatattgtattgaaaagtgaaatgggtcaatttttctgggacaata 46194376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 268 - 337
Target Start/End: Complemental strand, 51165069 - 51165000
Alignment:
Q  268 agagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    |||||||||||| | |||||| | ||||||||| |||||||| ||| |||||||||||||||| ||||||    
T  51165069 agagagaaaaataattttgagtgtctttatcaagtattggtgcattcttctttatcataaatgtaaagta 51165000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 330
Target Start/End: Complemental strand, 36790946 - 36790899
Alignment:
Q  283 tttgagcgcctttatcaactattggtgtattattctttatcataaatg 330  Q
    |||||||||  |||||||||||||||||||| ||||||||||||||||    
T  36790946 tttgagcgctcttatcaactattggtgtattcttctttatcataaatg 36790899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 250 - 337
Target Start/End: Original strand, 53754034 - 53754123
Alignment:
Q  250 aaaaattgtataaatgaaa--gagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    ||||| |||||||||||||  ||||||||||||| |||||| | ||||   || |||||||| ||| |||||||||||||||| ||||||    
T  53754034 aaaaagtgtataaatgaaatagagagaaaaatgattttgagtgtctttggtaagtattggtgcattcttctttatcataaatgtaaagta 53754123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 458 - 499
Target Start/End: Original strand, 42547235 - 42547276
Alignment:
Q  458 ttgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    ||||||||||||||||||||||||||||||| | ||||||||    
T  42547235 ttgtattgaaaagtgaaatgagtcaatttttttgggacaata 42547276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 337
Target Start/End: Original strand, 54021448 - 54021517
Alignment:
Q  268 agagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    |||||||||||||| |||||| | ||||||||| ||||| || ||| |||||||| ||||||| ||||||    
T  54021448 agagagaaaaatgattttgagtgtctttatcaaatattgttgcattcttctttattataaatgtaaagta 54021517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 1923145 - 1923185
Alignment:
Q  356 catttatgataaagaagaatacaccaatagttgataagggc 396  Q
    |||||||||||||||||||| |||||| |||||||||||||    
T  1923145 catttatgataaagaagaatgcaccaacagttgataagggc 1923185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 452 - 488
Target Start/End: Original strand, 49122225 - 49122261
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaattttt 488  Q
    |||||||||||||||||||| ||||||||||||||||    
T  49122225 ttaatattgtattgaaaagttaaatgagtcaattttt 49122261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 456 - 499
Target Start/End: Original strand, 30261629 - 30261672
Alignment:
Q  456 tattgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    |||||||||||||||||||||| |||||||||| | ||||||||    
T  30261629 tattgtattgaaaagtgaaatgggtcaatttttttgggacaata 30261672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 861 - 908
Target Start/End: Original strand, 36785232 - 36785279
Alignment:
Q  861 gcaataaattgtcaaatatttcacccacgttgcatgtctatgctctta 908  Q
    |||| |||||| ||||||||||| |||||||||||||| |||||||||    
T  36785232 gcaacaaattgccaaatatttcatccacgttgcatgtccatgctctta 36785279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 329
Target Start/End: Original strand, 36315698 - 36315784
Alignment:
Q  243 tattaagaaaaattgtataaatgaaagagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaat 329  Q
    |||||||||||| ||||||| | ||||||||||||| || || ||| | |||| | || |||||||  ||| |||||||||||||||    
T  36315698 tattaagaaaaagtgtataagtaaaagagagaaaaacgatttcgagtgtctttgttaagtattggtacattcttctttatcataaat 36315784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 355 - 392
Target Start/End: Complemental strand, 1334834 - 1334797
Alignment:
Q  355 acatttatgataaagaagaatacaccaatagttgataa 392  Q
    ||||||||||||||||||||| |||||||| |||||||    
T  1334834 acatttatgataaagaagaatgcaccaatacttgataa 1334797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 458 - 499
Target Start/End: Original strand, 39329879 - 39329920
Alignment:
Q  458 ttgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    |||||||||||||||||||||||||| |||| | ||||||||    
T  39329879 ttgtattgaaaagtgaaatgagtcaacttttttaggacaata 39329920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 452 - 485
Target Start/End: Complemental strand, 41031556 - 41031523
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatt 485  Q
    ||||||||||||||||||||||||||| ||||||    
T  41031556 ttaatattgtattgaaaagtgaaatgactcaatt 41031523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 337
Target Start/End: Complemental strand, 48409729 - 48409632
Alignment:
Q  243 tattaagaaaaattgtataaatgaaagagaga----aaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    ||||||||||||| ||||||||||||||||||    || ||   |||||| | |||| |||| |||||||| ||| |||||||||||||||| ||||||    
T  48409729 tattaagaaaaat-gtataaatgaaagagagagagaaagattgttttgagtgtctttgtcaagtattggtggattcttctttatcataaatgtaaagta 48409632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 355 - 392
Target Start/End: Original strand, 51165006 - 51165043
Alignment:
Q  355 acatttatgataaagaagaatacaccaatagttgataa 392  Q
    ||||||||||||||||||||| |||||||| |||||||    
T  51165006 acatttatgataaagaagaatgcaccaatacttgataa 51165043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 2e-33; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 224 - 334
Target Start/End: Complemental strand, 26583891 - 26583779
Alignment:
Q  224 ccttgactcatttcgcatttattaagaaaaattgtataaatgaaagagaga--aaaatgagtttgagcgcctttatcaactattggtgtattattcttta 321  Q
    |||||||||||||| || ||||||||||||| ||||||| |||||||||||  |||||||||||||| |||||||||||||||||||| ||| |||||||    
T  26583891 ccttgactcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgagtttgagtgcctttatcaactattggtgcattcttcttta 26583792  T
Q  322 tcataaatgcaaa 334  Q
    |||||||||||||    
T  26583791 tcataaatgcaaa 26583779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 211 - 337
Target Start/End: Original strand, 3160618 - 3160747
Alignment:
Q  211 catttaaactgagcc-ttgactcatttcgcatttattaagaaaaattgtataaatgaaagaga--gaaaaatgagtttgagcgcctttatcaactattgg 307  Q
    ||||| ||||||||| |||||||||||| || ||||||||||||| ||||||| |||||||||  |||||||| ||||||| ||| || |||||||||||    
T  3160618 cattttaactgagcccttgactcatttcacacttattaagaaaaagtgtataagtgaaagagaaagaaaaatgggtttgagtgcccttgtcaactattgg 3160717  T
Q  308 tgtattattctttatcataaatgcaaagta 337  Q
    || |||||||||||||||||||||||||||    
T  3160718 tgcattattctttatcataaatgcaaagta 3160747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 217 - 339
Target Start/End: Original strand, 26924057 - 26924182
Alignment:
Q  217 aactgagc-cttgactcatttcgcatttattaagaaaaattgtataaatgaaagag--agaaaaatgagtttgagcgcctttatcaactattggtgtatt 313  Q
    |||||||| |||| |||||||| || ||||||||||||| |||| || ||||||||  ||||||||||||||||| ||| |||||||||||||||| |||    
T  26924057 aactgagctcttggctcatttcacacttattaagaaaaagtgtaaaagtgaaagagagagaaaaatgagtttgagtgcccttatcaactattggtgcatt 26924156  T
Q  314 attctttatcataaatgcaaagtata 339  Q
     |||||||||||||||||||||||||    
T  26924157 cttctttatcataaatgcaaagtata 26924182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 224 - 337
Target Start/End: Original strand, 29756087 - 29756202
Alignment:
Q  224 ccttgactcatttcgcatttattaagaaaaattgtataaatgaaagag--agaaaaatgagtttgagcgcctttatcaactattggtgtattattcttta 321  Q
    ||||| |||||||| || ||||||||||||| ||||||| ||||||||  ||||||||| ||||||| ||| |||||||||||||||| ||| |||||||    
T  29756087 ccttggctcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgggtttgagtgcccttatcaactattggtgcattcttcttta 29756186  T
Q  322 tcataaatgcaaagta 337  Q
    ||||||||||||||||    
T  29756187 tcataaatgcaaagta 29756202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 226 - 339
Target Start/End: Original strand, 24131349 - 24131462
Alignment:
Q  226 ttgactcatttcgcatttattaagaaaaattgtataaatgaaagagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcat 325  Q
    |||||||||||| || |||||||||||||  |||||| |||||||||||||||||  |||||  ||| ||||||||||| |||| ||| |||||||||||    
T  24131349 ttgactcatttcacacttattaagaaaaagcgtataagtgaaagagagaaaaatggttttgaatgcccttatcaactataggtgcattcttctttatcat 24131448  T
Q  326 aaatgcaaagtata 339  Q
    ||||||||||||||    
T  24131449 aaatgcaaagtata 24131462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 217 - 337
Target Start/End: Original strand, 40754351 - 40754473
Alignment:
Q  217 aactgagc-cttgactcatttcgcatttattaagaaaaattgtataaatgaaagagagaaaaatgagtttgagcgcctttatcaa-ctattggtgtatta 314  Q
    |||||||| |||||||||||||  | ||||||||||||| ||||||| ||||||||||| |||||  |||||| ||| ||||||| ||||||||| |||     
T  40754351 aactgagctcttgactcatttcatacttattaagaaaaagtgtataagtgaaagagagagaaatggttttgagtgcccttatcaacctattggtgcattc 40754450  T
Q  315 ttctttatcataaatgcaaagta 337  Q
    |||||||||||||||||||||||    
T  40754451 ttctttatcataaatgcaaagta 40754473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 226 - 339
Target Start/End: Complemental strand, 5503579 - 5503466
Alignment:
Q  226 ttgactcatttcgcatttattaagaaaaattgtataaatgaaagagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcat 325  Q
    |||||||||||| || ||||||||||||| |||||||||||| ||||||||||||  |||  |  || |||||||||||||||| ||| |||||||||||    
T  5503579 ttgactcatttcacacttattaagaaaaagtgtataaatgaaggagagaaaaatggttttaggtacccttatcaactattggtgcattcttctttatcat 5503480  T
Q  326 aaatgcaaagtata 339  Q
     ||| |||||||||    
T  5503479 taattcaaagtata 5503466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 257 - 337
Target Start/End: Complemental strand, 31798546 - 31798466
Alignment:
Q  257 gtataaatgaaagagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    |||||| ||||||||||||| |||  |||||| ||| |||||||||||||||| |||||||||||||||||||||||||||    
T  31798546 gtataagtgaaagagagaaatatggttttgagtgcccttatcaactattggtgcattattctttatcataaatgcaaagta 31798466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 229 - 337
Target Start/End: Original strand, 46363360 - 46363471
Alignment:
Q  229 actcatttcgcatttattaagaaaaattgtataaatgaaagagagaaa--aatgagtttgagcgc-ctttatcaactattggtgtattattctttatcat 325  Q
    ||||||||| || ||||||||||||| ||||||| ||| ||||||| |  |||| ||||||| || |||||||||||||||||| ||| |||||||||||    
T  46363360 actcatttcacacttattaagaaaaagtgtataagtgagagagagagagaaatgtgtttgagtgcactttatcaactattggtgcattcttctttatcat 46363459  T
Q  326 aaatgcaaagta 337  Q
    ||||||||||||    
T  46363460 aaatgcaaagta 46363471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 226 - 337
Target Start/End: Original strand, 37541060 - 37541173
Alignment:
Q  226 ttgactcatttcgcatttattaagaaaaattgtataaatgaaagag--agaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatc 323  Q
    |||| ||||||| || ||||||||||||| ||||||| ||||||||  |||||||||  |||||  | |||||||||||||||||| ||| ||||||||     
T  37541060 ttgattcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatggttttgaatgtctttatcaactattggtgcattcttctttatt 37541159  T
Q  324 ataaatgcaaagta 337  Q
    ||||||| ||||||    
T  37541160 ataaatgtaaagta 37541173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 324
Target Start/End: Complemental strand, 26760437 - 26760337
Alignment:
Q  226 ttgactcatttcgcatttattaagaaaaattgtataaatgaaaga--gagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatc 323  Q
    |||||||||||| || ||||||||||||| ||||||| |||||||  ||||||||||||||||||  |  ||||||| |||||||| ||| |||| ||||    
T  26760437 ttgactcatttcacacttattaagaaaaaatgtataagtgaaagagagagaaaaatgagtttgagttctcttatcaattattggtgcattcttctctatc 26760338  T
Q  324 a 324  Q
    |    
T  26760337 a 26760337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 337
Target Start/End: Original strand, 27932824 - 27932893
Alignment:
Q  268 agagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    ||||||||||||| ||||||| | | || ||||||||||||| ||| |||||||||||||||||||||||    
T  27932824 agagagaaaaatgcgtttgagtgtccttgtcaactattggtgcattcttctttatcataaatgcaaagta 27932893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 337
Target Start/End: Original strand, 37925171 - 37925306
Alignment:
Q  209 ttcatttaaactgagc-cttgactcatttcgcatttattaagaaaaattgtataaatgaaagag------agaaaaatgagtttgagcgcctttatcaac 301  Q
    ||||||| |||||||  |||| |||||||  || ||||||||||||| ||||||| ||||||||      |||||||||| ||| || ||  |||||||     
T  37925171 ttcattttaactgagttcttggctcatttaacacttattaagaaaaagtgtataagtgaaagagagagagagaaaaatgatttttagtgctcttatcaat 37925270  T
Q  302 tattggtgtattattctttatcataaatgcaaagta 337  Q
    |||||||| ||| |||||||||||||||||||||||    
T  37925271 tattggtgcatttttctttatcataaatgcaaagta 37925306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 257 - 337
Target Start/End: Complemental strand, 44580644 - 44580564
Alignment:
Q  257 gtataaatgaaagagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    |||||| ||||||||||||||||| ||| ||| | | |||||||||||| ||| ||| || ||||||||||||||||||||    
T  44580644 gtataagtgaaagagagaaaaatgggttagagtgaccttatcaactatttgtgcatttttttttatcataaatgcaaagta 44580564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 452 - 499
Target Start/End: Complemental strand, 26760141 - 26760094
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  26760141 ttaatattgtattgaaaagtgaaatgaatcaatttttctgggacaata 26760094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 356 - 403
Target Start/End: Complemental strand, 26924173 - 26924126
Alignment:
Q  356 catttatgataaagaagaatacaccaatagttgataagggcgctcaaa 403  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||    
T  26924173 catttatgataaagaagaatgcaccaatagttgataagggcactcaaa 26924126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 452 - 499
Target Start/End: Original strand, 26924393 - 26924440
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  26924393 ttaatattgtattgaaaagtgaaatgaatcaatttttctgggacaata 26924440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 356 - 403
Target Start/End: Complemental strand, 29756195 - 29756148
Alignment:
Q  356 catttatgataaagaagaatacaccaatagttgataagggcgctcaaa 403  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||    
T  29756195 catttatgataaagaagaatgcaccaatagttgataagggcactcaaa 29756148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 452 - 499
Target Start/End: Original strand, 29756268 - 29756315
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||    
T  29756268 ttaatattgtattgaaaagtgaaatgggtcaatttttctaggacaata 29756315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 328
Target Start/End: Complemental strand, 14090793 - 14090697
Alignment:
Q  230 ctcatttcgcatttattaagaaaaattgtataaatgaaagagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaa 328  Q
    |||||||| || ||||||||| ||| ||||||| |||||||||||||||| || ||||  | |||||||||||||||||| ||| || |||||||||||    
T  14090793 ctcatttcacacttattaagacaaaatgtataagtgaaagagagaaaaat-ag-ttgattgtctttatcaactattggtgcattcttgtttatcataaa 14090697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 337
Target Start/End: Complemental strand, 37495963 - 37495877
Alignment:
Q  251 aaaattgtataaatgaaagagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    |||| ||||||||||||| ||||| |||||| |||||  | ||||||||| |||||||| ||| |||||||| ||||||| ||||||    
T  37495963 aaaagtgtataaatgaaaaagagagaaatgattttgaatgtctttatcaagtattggtgcattcttctttattataaatgtaaagta 37495877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 329
Target Start/End: Original strand, 50773301 - 50773398
Alignment:
Q  231 tcatttcgcatttattaagaaaaattgtataaatgaaagagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaat 329  Q
    |||||||||| ||||||||||||  ||||||| |||||||||| | |||| ||||||| ||  |||||||||||| ||||||| || | ||||||||||    
T  50773301 tcatttcgcacttattaagaaaacgtgtataagtgaaagagag-agaatgggtttgagtgctcttatcaactattagtgtattcttttctatcataaat 50773398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 337
Target Start/End: Complemental strand, 50926904 - 50926795
Alignment:
Q  230 ctcatttcgcatttattaagaaaaattgtataaatgaaagagaga--aaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataa 327  Q
    |||||||| ||| ||||||||||||||||||||   |||||||||  ||||||  |||||  || ||| |||| |||||||| ||| |||||||||||||    
T  50926904 ctcatttcacatatattaagaaaaattgtataagaaaaagagagagaaaaatggttttgaatgcatttgtcaagtattggtgcattcttctttatcataa 50926805  T
Q  328 atgcaaagta 337  Q
    ||| ||||||    
T  50926804 atgtaaagta 50926795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 452 - 488
Target Start/End: Complemental strand, 1859491 - 1859455
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaattttt 488  Q
    |||||||||||||||||||||||||||||||||||||    
T  1859491 ttaatattgtattgaaaagtgaaatgagtcaattttt 1859455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 454 - 490
Target Start/End: Complemental strand, 44580498 - 44580462
Alignment:
Q  454 aatattgtattgaaaagtgaaatgagtcaatttttct 490  Q
    |||||||||||||||||||||||||||||||||||||    
T  44580498 aatattgtattgaaaagtgaaatgagtcaatttttct 44580462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 356 - 403
Target Start/End: Original strand, 26583783 - 26583830
Alignment:
Q  356 catttatgataaagaagaatacaccaatagttgataagggcgctcaaa 403  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||    
T  26583783 catttatgataaagaagaatgcaccaatagttgataaaggcactcaaa 26583830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 27209939 - 27210025
Alignment:
Q  251 aaaattgtataaatgaaagag--agaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaag 335  Q
    |||| ||||||||||||||||  |||||||||| |||||| | ||||  ||| |||||||| ||| |||||||||||||||| ||||    
T  27209939 aaaagtgtataaatgaaagagagagaaaaatgattttgagtgtctttgacaagtattggtgcattcttctttatcataaatgtaaag 27210025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 330
Target Start/End: Original strand, 28706594 - 28706676
Alignment:
Q  250 aaaaattgtataaatgaa--agagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatg 330  Q
    ||||| ||||||||||||  |||||||||||||  |||||| |||||| |||| ||||| || ||| ||||||||||||||||    
T  28706594 aaaaaatgtataaatgaataagagagaaaaatggttttgagtgcctttgtcaagtattgatgcatttttctttatcataaatg 28706676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 356 - 403
Target Start/End: Original strand, 31798473 - 31798520
Alignment:
Q  356 catttatgataaagaagaatacaccaatagttgataagggcgctcaaa 403  Q
    |||||||||||||||| ||| |||||||||||||||||||| ||||||    
T  31798473 catttatgataaagaataatgcaccaatagttgataagggcactcaaa 31798520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 453 - 487
Target Start/End: Original strand, 18186330 - 18186364
Alignment:
Q  453 taatattgtattgaaaagtgaaatgagtcaatttt 487  Q
    |||||||||||||||||||||||||||||||||||    
T  18186330 taatattgtattgaaaagtgaaatgagtcaatttt 18186364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 337
Target Start/End: Original strand, 37280967 - 37281057
Alignment:
Q  244 attaagaaaaattgtataaatgaaagagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    |||||||||||| || |||||||||||||||||  ||| |||||| | |||| |||| |||||||| ||| || ||||||||||||| ||||||    
T  37280967 attaagaaaaat-gtgtaaatgaaagagagaaa--tgattttgagtgtctttgtcaagtattggtgcattcttttttatcataaatgtaaagta 37281057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 16956687 - 16956599
Alignment:
Q  243 tattaagaaaaattgtataaatgaaag--agagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaat 329  Q
    |||||||||||| ||||||| ||||||  ||||||||||| ||||||| | |||||| || |||| ||| ||| || ||||||||||||    
T  16956687 tattaagaaaaagtgtataagtgaaaggaagagaaaaatgggtttgagtgtctttattaagtatttgtgcattcttatttatcataaat 16956599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 339
Target Start/End: Original strand, 21304760 - 21304868
Alignment:
Q  231 tcatttcgcatttattaagaaaaattgtataaatgaaagagaga-aaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaat 329  Q
    ||||||| |||  |||||||||||| |||||||||||||||||| |||||   |||||| | |||| |||| ||||| || ||| |||||||||||||||    
T  21304760 tcatttcacataaattaagaaaaat-gtataaatgaaagagagataaaattgttttgagtgtctttgtcaagtattgatgcatttttctttatcataaat 21304858  T
Q  330 gcaaagtata 339  Q
      ||||||||    
T  21304859 ataaagtata 21304868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 337
Target Start/End: Complemental strand, 33149390 - 33149321
Alignment:
Q  268 agagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    |||||||||||||  |||||| | | |||| || |||||||| ||| |||||||||||||||||||||||    
T  33149390 agagagaaaaatggatttgagtgtccttattaattattggtggattcttctttatcataaatgcaaagta 33149321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 252 - 337
Target Start/End: Original strand, 2219421 - 2219508
Alignment:
Q  252 aaattgtataaatgaaagagagaaaa--atgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    ||||||||||||||||||||||| ||  |||| |||||| | |||||| ||  |||| || ||| |||||||||||||||| ||||||    
T  2219421 aaattgtataaatgaaagagagagaataatgattttgagtgtctttataaaagattgatgcattcttctttatcataaatgtaaagta 2219508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 24131453 - 24131413
Alignment:
Q  356 catttatgataaagaagaatacaccaatagttgataagggc 396  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  24131453 catttatgataaagaagaatgcacctatagttgataagggc 24131413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 452 - 496
Target Start/End: Original strand, 24131524 - 24131568
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttctcggaca 496  Q
    ||||||||| ||||||||||||||| ||||||||||||| |||||    
T  24131524 ttaatattgcattgaaaagtgaaataagtcaatttttctgggaca 24131568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 452 - 488
Target Start/End: Complemental strand, 26583712 - 26583676
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaattttt 488  Q
    |||||||||||||||||||||||||| ||||||||||    
T  26583712 ttaatattgtattgaaaagtgaaatgggtcaattttt 26583676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 356 - 403
Target Start/End: Complemental strand, 40754466 - 40754418
Alignment:
Q  356 catttatgataaagaagaatacaccaata-gttgataagggcgctcaaa 403  Q
    |||||||||||||||||||| |||||||| |||||||||||| ||||||    
T  40754466 catttatgataaagaagaatgcaccaataggttgataagggcactcaaa 40754418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 356 - 392
Target Start/End: Complemental strand, 46363464 - 46363428
Alignment:
Q  356 catttatgataaagaagaatacaccaatagttgataa 392  Q
    |||||||||||||||||||| ||||||||||||||||    
T  46363464 catttatgataaagaagaatgcaccaatagttgataa 46363428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 452 - 488
Target Start/End: Original strand, 52146784 - 52146820
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaattttt 488  Q
    |||||||||||||||||||| ||||||||||||||||    
T  52146784 ttaatattgtattgaaaagttaaatgagtcaattttt 52146820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 339
Target Start/End: Original strand, 705313 - 705411
Alignment:
Q  243 tattaagaaaaattgtataaatgaaagaga--gaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagtata 339  Q
    |||||||||||| ||||||| | |||||||  ||||||||| |||||  | |||||| || |||| ||| ||| |||||||||||| ||| ||||||||    
T  705313 tattaagaaaaaatgtataagttaaagagaaagaaaaatgattttgaatgtctttattaagtattagtgcattcttctttatcatagatgtaaagtata 705411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 452 - 499
Target Start/End: Complemental strand, 2886155 - 2886108
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    |||||||||||||||||||||||||   ||||||||||| ||||||||    
T  2886155 ttaatattgtattgaaaagtgaaattgatcaatttttctgggacaata 2886108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 337
Target Start/End: Complemental strand, 2886262 - 2886219
Alignment:
Q  294 ttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    |||||||||||||| | ||| |||||||||||||||||||||||    
T  2886262 ttatcaactattggagcattcttctttatcataaatgcaaagta 2886219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 356 - 403
Target Start/End: Complemental strand, 3160740 - 3160693
Alignment:
Q  356 catttatgataaagaagaatacaccaatagttgataagggcgctcaaa 403  Q
    |||||||||||||||| ||| ||||||||||||| |||||| ||||||    
T  3160740 catttatgataaagaataatgcaccaatagttgacaagggcactcaaa 3160693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 356 - 403
Target Start/End: Complemental strand, 27932886 - 27932839
Alignment:
Q  356 catttatgataaagaagaatacaccaatagttgataagggcgctcaaa 403  Q
    |||||||||||||||||||| ||||||||||||| |||| | ||||||    
T  27932886 catttatgataaagaagaatgcaccaatagttgacaaggacactcaaa 27932839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 337
Target Start/End: Original strand, 29225386 - 29225468
Alignment:
Q  257 gtataaatgaaagag--agaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    |||||| ||||||||  |||||||||| |||||| |||||| | || |||||||| ||| || ||||||||||||| ||||||    
T  29225386 gtataagtgaaagagtgagaaaaatgattttgagtgcctttgttaagtattggtgcattcttttttatcataaatggaaagta 29225468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 337
Target Start/End: Original strand, 49662730 - 49662816
Alignment:
Q  250 aaaaattgtataaatgaaagagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    ||||| ||||||| |||||||||||||||||| |||||||  | || |||| |||||||||||||    ||||||||||| |||||||    
T  49662730 aaaaaatgtataagtgaaagagagaaaaatgattttgagcatc-ttctcaagtattggtgtattacctattatcataaattcaaagta 49662816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 394
Target Start/End: Original strand, 2886226 - 2886264
Alignment:
Q  356 catttatgataaagaagaatacaccaatagttgataagg 394  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  2886226 catttatgataaagaagaatgctccaatagttgataagg 2886264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 361 - 395
Target Start/End: Original strand, 5503480 - 5503514
Alignment:
Q  361 atgataaagaagaatacaccaatagttgataaggg 395  Q
    ||||||||||||||| |||||||||||||||||||    
T  5503480 atgataaagaagaatgcaccaatagttgataaggg 5503514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 268 - 337
Target Start/End: Original strand, 4466145 - 4466214
Alignment:
Q  268 agagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    ||||||||||||| |||||||  ||||| | || |||||||  ||| |||||||||||||||| ||||||    
T  4466145 agagagaaaaatgggtttgagtacctttgttaagtattggtccattcttctttatcataaatgtaaagta 4466214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 452 - 485
Target Start/End: Complemental strand, 6784987 - 6784954
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatt 485  Q
    ||||||||||||||||||||||||||| ||||||    
T  6784987 ttaatattgtattgaaaagtgaaatgattcaatt 6784954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 452 - 485
Target Start/End: Complemental strand, 27698796 - 27698763
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatt 485  Q
    ||||||||||||||||||||||||||| ||||||    
T  27698796 ttaatattgtattgaaaagtgaaatgactcaatt 27698763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 268 - 329
Target Start/End: Original strand, 36232780 - 36232841
Alignment:
Q  268 agagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaat 329  Q
    |||||||||||||| |||||| | ||||  ||| |||||||| ||| |||||||||||||||    
T  36232780 agagagaaaaatgattttgagtgtctttgacaagtattggtgcattcttctttatcataaat 36232841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 279
Target Start/End: Complemental strand, 37525194 - 37525146
Alignment:
Q  230 ctcatttcgcatttattaagaaaaattgtataaatgaaagagagaaaaat 279  Q
    |||||||| ||| ||||||||||||| ||||||||||| |||||||||||    
T  37525194 ctcatttcacatgtattaagaaaaat-gtataaatgaaggagagaaaaat 37525146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 355 - 392
Target Start/End: Complemental strand, 37541167 - 37541130
Alignment:
Q  355 acatttatgataaagaagaatacaccaatagttgataa 392  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  37541167 acatttataataaagaagaatgcaccaatagttgataa 37541130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 2e-30; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 211 - 335
Target Start/End: Complemental strand, 28330971 - 28330844
Alignment:
Q  211 catttaaactgagcc-ttgactcatttcgcatttattaagaaaaattgtataaatgaaagagaga--aaaatgagtttgagcgcctttatcaactattgg 307  Q
    ||||| ||||||||| |||||||||||| || ||||||||||||| ||||||| |||||||||||  |||||| ||||||| ||| ||||||||||||||    
T  28330971 cattttaactgagccattgactcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgggtttgagtgcccttatcaactattgg 28330872  T
Q  308 tgtattattctttatcataaatgcaaag 335  Q
    || ||| |||||||||||||||||||||    
T  28330871 tgcattcttctttatcataaatgcaaag 28330844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 211 - 337
Target Start/End: Original strand, 20964218 - 20964347
Alignment:
Q  211 catttaaactgagc-cttgactcatttcgcatttattaagaaaaattgtataaatgaaagag--agaaaaatgagtttgagcgcctttatcaactattgg 307  Q
    ||||| |||||||| ||||||||||||| || ||||||||||||| ||||||| ||||||||  ||||||||||||||| | | ||||||||||||||||    
T  20964218 cattttaactgagctcttgactcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgagtttgcgtgtctttatcaactattgg 20964317  T
Q  308 tgtattattctttatcataaatgcaaagta 337  Q
    || ||| ||||||||| |||||||||||||    
T  20964318 tgcattcttctttatcgtaaatgcaaagta 20964347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 233 - 337
Target Start/End: Complemental strand, 38320065 - 38319959
Alignment:
Q  233 atttcgcatttattaagaaaaattgtataaatgaaagagaga--aaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatg 330  Q
    ||||| |||||||||||||||| ||||||| |||||||||||  |||||| ||||||| ||| |||||||||||||||| ||| ||||||||||||||||    
T  38320065 atttcacatttattaagaaaaagtgtataagtgaaagagagagaaaaatgggtttgagtgcccttatcaactattggtgcattcttctttatcataaatg 38319966  T
Q  331 caaagta 337  Q
    |||||||    
T  38319965 caaagta 38319959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 231 - 337
Target Start/End: Complemental strand, 53848802 - 53848694
Alignment:
Q  231 tcatttcgcatttattaagaaaaattgtataaatgaaagagagaaaaa--tgagtttgagcgcctttatcaactattggtgtattattctttatcataaa 328  Q
    ||||||| | |||||||||||||| ||||||| || ||||||||||||  ||| |||||| ||| |||||||||||||||| |||||| |||||||||||    
T  53848802 tcatttcacgtttattaagaaaaagtgtataagtgtaagagagaaaaaaatgattttgagtgcccttatcaactattggtgcattattatttatcataaa 53848703  T
Q  329 tgcaaagta 337  Q
    |||||||||    
T  53848702 tgcaaagta 53848694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 225 - 337
Target Start/End: Complemental strand, 42132977 - 42132861
Alignment:
Q  225 cttgactcatttcgcatttattaagaaaaattgtataaatgaaaga--gagaaaaatgagtttga--gcgcctttatcaactattggtgtattattcttt 320  Q
    ||||||||||||| || ||||||||||||| ||||||| |||||||  |||||||||| ||||||  ||||| |||| |||||||| || ||| ||||||    
T  42132977 cttgactcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgggtttgagtgcgcccttataaactattgatgcattcttcttt 42132878  T
Q  321 atcataaatgcaaagta 337  Q
    |||||||||||||||||    
T  42132877 atcataaatgcaaagta 42132861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 211 - 337
Target Start/End: Original strand, 32949778 - 32949908
Alignment:
Q  211 catttaaactgagcctt-gactcatttcgcatttattaagaaaaattgtataaatgaaagaga--gaaaaatgagttt-gagcgcctttatcaactattg 306  Q
    ||||| ||||||||||| |||||||||| || ||||||| ||||| ||||||||||||| |||  ||||||||  ||| ||| | |||||||||||||||    
T  32949778 cattttaactgagcctttgactcatttcacacttattaaaaaaaagtgtataaatgaaatagatagaaaaatggtttttgagtgtctttatcaactattg 32949877  T
Q  307 gtgtattattctttatcataaatgcaaagta 337  Q
    ||| ||| |||||||||||||||| ||||||    
T  32949878 gtgcatttttctttatcataaatgtaaagta 32949908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 224 - 339
Target Start/End: Original strand, 49218727 - 49218843
Alignment:
Q  224 ccttgactcatttcgcatttattaagaaaaattgtataaatgaa--agagagaaaaatgagtttgagcgcctttatcaactattggtgtattattcttta 321  Q
    ||||| |||||||| || ||||||||||||| ||||||| ||||  ||||||||||||| ||| ||| ||| |||||| ||||||||| |||  ||||||    
T  49218727 ccttggctcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgggttagagtgcccttatcagctattggtgcatt-ctcttta 49218825  T
Q  322 tcataaatgcaaagtata 339  Q
    |||||||| |||||||||    
T  49218826 tcataaattcaaagtata 49218843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 337
Target Start/End: Complemental strand, 8759937 - 8759827
Alignment:
Q  229 actcatttcgcatttattaagaaaaattgtataaatgaaagagaga--aaaatgagtttgagcgcctttatcaactattggtgtattattctttatcata 326  Q
    |||||||||  | ||||||| ||||| |||||||||||||||||||  |||||| |||| ||  |  ||||||||||||| || ||| ||||||||||||    
T  8759937 actcatttcaaacttattaaaaaaaagtgtataaatgaaagagagagaaaaatgggtttcagttcacttatcaactattgatgcatttttctttatcata 8759838  T
Q  327 aatgcaaagta 337  Q
    |||||||||||    
T  8759837 aatgcaaagta 8759827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 339
Target Start/End: Complemental strand, 13719912 - 13719821
Alignment:
Q  250 aaaaattgtataaatgaaagaga--gaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagtata 339  Q
    ||||| |||||||||||||||||  |||||||| ||||||| | |||| | || || || ||||||||||||||||||||||| ||||||||    
T  13719912 aaaaagtgtataaatgaaagagaaagaaaaatgggtttgagtgtctttgttaagtaatgatgtattattctttatcataaatgtaaagtata 13719821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 337
Target Start/End: Original strand, 22020454 - 22020569
Alignment:
Q  222 agccttgactcatttcgcatttattaagaaaaattgtataaatgaaagagaga-aaaatgagtttgagcgcctttatcaactattggtgtattattcttt 320  Q
    ||||| |||||||||| || ||||||||||||| ||||||||||| || |||| ||||||  ||||||  ||||| ||||||||| ||  ||| ||| ||    
T  22020454 agcctcgactcatttcacacttattaagaaaaagtgtataaatgagagtgagagaaaatggttttgagttcctttgtcaactatttgtacatttttc-tt 22020552  T
Q  321 atcataaatgcaaagta 337  Q
    |||||||||||||||||    
T  22020553 atcataaatgcaaagta 22020569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 337
Target Start/End: Original strand, 39052866 - 39052960
Alignment:
Q  244 attaagaaaaattgtataaatgaaagagagaaaaatgag--tttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    |||||||||||| |||||||||||||||| |||||  ||  |||||| | ||||||||| |||||||| ||| |||||||||||||||| ||||||    
T  39052866 attaagaaaaat-gtataaatgaaagagaaaaaaaaaagaatttgagtgtctttatcaagtattggtgcattcttctttatcataaatgtaaagta 39052960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 337
Target Start/End: Original strand, 48400596 - 48400690
Alignment:
Q  244 attaagaaaaattgtataaatgaaagag--agaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    |||||||||||| |||||||||||||||  |||||||||| ||| |  || |||||||| ||||| |||||| |||||||||||||||| ||||||    
T  48400596 attaagaaaaat-gtataaatgaaagagagagaaaaatgatttttaatgcttttatcaagtattgatgtattcttctttatcataaatgtaaagta 48400690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 356 - 403
Target Start/End: Original strand, 28330849 - 28330896
Alignment:
Q  356 catttatgataaagaagaatacaccaatagttgataagggcgctcaaa 403  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||    
T  28330849 catttatgataaagaagaatgcaccaatagttgataagggcactcaaa 28330896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 452 - 499
Target Start/End: Original strand, 36047224 - 36047271
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||    
T  36047224 ttaatattgtattgaaaagtgaaatgagtcaatttttctgagacaata 36047271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 356 - 403
Target Start/End: Original strand, 38319966 - 38320013
Alignment:
Q  356 catttatgataaagaagaatacaccaatagttgataagggcgctcaaa 403  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||    
T  38319966 catttatgataaagaagaatgcaccaatagttgataagggcactcaaa 38320013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 452 - 499
Target Start/End: Original strand, 42738455 - 42738502
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||    
T  42738455 ttaatattgtattgaaaagtgaaatgagtcaatttttttaggacaata 42738502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 452 - 489
Target Start/End: Complemental strand, 38319895 - 38319858
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttc 489  Q
    ||||||||||||||||||||||||||||||||||||||    
T  38319895 ttaatattgtattgaaaagtgaaatgagtcaatttttc 38319858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 328
Target Start/End: Original strand, 34790922 - 34791001
Alignment:
Q  251 aaaattgtataaatgaaag--agagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaa 328  Q
    |||| ||||||||||||||  |||||||||||| |||||| || |||||||| |||| ||| ||| ||||||||||||||    
T  34790922 aaaagtgtataaatgaaagtgagagaaaaatgattttgagtgcttttatcaagtatttgtgcattcttctttatcataaa 34791001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 452 - 499
Target Start/End: Original strand, 20964417 - 20964464
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    |||||||||||||||||||||||||  |||||||||||| ||||||||    
T  20964417 ttaatattgtattgaaaagtgaaataggtcaatttttctgggacaata 20964464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 337
Target Start/End: Original strand, 36047092 - 36047159
Alignment:
Q  270 agagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    ||||||||||| || |||| ||  |||||||||||| ||| ||| |||||||||||||||||||||||    
T  36047092 agagaaaaatgggtatgagtgctcttatcaactattagtgcattcttctttatcataaatgcaaagta 36047159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 452 - 499
Target Start/End: Complemental strand, 54217326 - 54217279
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    |||||||||||||||||| |||||||||||||||||||| | ||||||    
T  54217326 ttaatattgtattgaaaaatgaaatgagtcaatttttctagaacaata 54217279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 226 - 313
Target Start/End: Complemental strand, 54217532 - 54217441
Alignment:
Q  226 ttgactcatttcgcatttattaagaaaaattgtataaatgaaagagag----aaaaatgagtttgagcgcctttatcaactattggtgtatt 313  Q
    ||||||||||||  | ||||||||||||| ||||||| ||||||||||    ||||||| |||||||  || || |||||||||||||||||    
T  54217532 ttgactcatttcatacttattaagaaaaagtgtataagtgaaagagagagaaaaaaatgggtttgagtacccttgtcaactattggtgtatt 54217441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 337
Target Start/End: Original strand, 35998088 - 35998176
Alignment:
Q  251 aaaattgtataaatgaaagaga--gaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    |||| |||||||||||||| ||  ||||||| | |||||| | ||||||||| |||||||  ||| |||||||||||||||| ||||||    
T  35998088 aaaagtgtataaatgaaagcgaacgaaaaataattttgagtgtctttatcaagtattggtacattcttctttatcataaatgtaaagta 35998176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 337
Target Start/End: Original strand, 42051627 - 42051715
Alignment:
Q  251 aaaattgtataaatgaaagaga--gaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    |||| |||||||||||||||||  ||||||||  ||| || | ||||| ||| |||||||| ||| |||||||||||||||| ||||||    
T  42051627 aaaagtgtataaatgaaagagatagaaaaatggtttttagtgtctttagcaagtattggtgcattcttctttatcataaatgtaaagta 42051715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 452 - 485
Target Start/End: Original strand, 49218906 - 49218939
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatt 485  Q
    ||||||||||||||||||||||||||||||||||    
T  49218906 ttaatattgtattgaaaagtgaaatgagtcaatt 49218939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 452 - 488
Target Start/End: Complemental strand, 5291673 - 5291637
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaattttt 488  Q
    |||||||||||||||||||||||||| ||||||||||    
T  5291673 ttaatattgtattgaaaagtgaaatgggtcaattttt 5291637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 452 - 488
Target Start/End: Complemental strand, 28330776 - 28330740
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaattttt 488  Q
    |||||||||||||||||||||||||| ||||||||||    
T  28330776 ttaatattgtattgaaaagtgaaatgggtcaattttt 28330740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 452 - 488
Target Start/End: Complemental strand, 47386143 - 47386107
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaattttt 488  Q
    ||||||||||||||||||||||||||| |||||||||    
T  47386143 ttaatattgtattgaaaagtgaaatgaatcaattttt 47386107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 452 - 487
Target Start/End: Original strand, 388543 - 388578
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttt 487  Q
    ||||||||||||||||||||||||| ||||||||||    
T  388543 ttaatattgtattgaaaagtgaaataagtcaatttt 388578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 452 - 499
Target Start/End: Original strand, 32949974 - 32950021
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    ||||||||||||| ||||||||||||| || |||||||| ||||||||    
T  32949974 ttaatattgtattaaaaagtgaaatgattctatttttcttggacaata 32950021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 452 - 499
Target Start/End: Original strand, 51572350 - 51572397
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    ||||||||||||||||||||||||| |||||||| || | ||||||||    
T  51572350 ttaatattgtattgaaaagtgaaataagtcaattattttaggacaata 51572397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 452 - 487
Target Start/End: Complemental strand, 53848316 - 53848281
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttt 487  Q
    |||||||||||||||||||||||||| |||||||||    
T  53848316 ttaatattgtattgaaaagtgaaatgggtcaatttt 53848281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 356 - 403
Target Start/End: Original strand, 53848701 - 53848748
Alignment:
Q  356 catttatgataaagaagaatacaccaatagttgataagggcgctcaaa 403  Q
    ||||||||||||| || ||| |||||||||||||||||||| ||||||    
T  53848701 catttatgataaataataatgcaccaatagttgataagggcactcaaa 53848748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 452 - 490
Target Start/End: Original strand, 37316045 - 37316083
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttct 490  Q
    ||||||||||||||||||||||||||  |||||||||||    
T  37316045 ttaatattgtattgaaaagtgaaatggatcaatttttct 37316083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 398
Target Start/End: Original strand, 42132868 - 42132910
Alignment:
Q  356 catttatgataaagaagaatacaccaatagttgataagggcgc 398  Q
    |||||||||||||||||||| || |||||||| ||||||||||    
T  42132868 catttatgataaagaagaatgcatcaatagtttataagggcgc 42132910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 300 - 337
Target Start/End: Original strand, 11583893 - 11583930
Alignment:
Q  300 actattggtgtattattctttatcataaatgcaaagta 337  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  11583893 actattggtgtattattctttattataaatgtaaagta 11583930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 355 - 392
Target Start/End: Complemental strand, 32949902 - 32949865
Alignment:
Q  355 acatttatgataaagaagaatacaccaatagttgataa 392  Q
    ||||||||||||||||| ||| ||||||||||||||||    
T  32949902 acatttatgataaagaaaaatgcaccaatagttgataa 32949865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 454 - 487
Target Start/End: Original strand, 35029222 - 35029255
Alignment:
Q  454 aatattgtattgaaaagtgaaatgagtcaatttt 487  Q
    ||||||||||||||||||||||||| ||||||||    
T  35029222 aatattgtattgaaaagtgaaatgaatcaatttt 35029255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 356 - 393
Target Start/End: Complemental strand, 36047152 - 36047115
Alignment:
Q  356 catttatgataaagaagaatacaccaatagttgataag 393  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  36047152 catttatgataaagaagaatgcactaatagttgataag 36047115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 268 - 337
Target Start/End: Original strand, 37315912 - 37315981
Alignment:
Q  268 agagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    |||||||||||||  ||||   ||| |||| ||||||| ||| ||| |||||||||||||||||||||||    
T  37315912 agagagaaaaatggttttggatgcccttattaactattagtgcatttttctttatcataaatgcaaagta 37315981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 355 - 392
Target Start/End: Complemental strand, 39052954 - 39052917
Alignment:
Q  355 acatttatgataaagaagaatacaccaatagttgataa 392  Q
    ||||||||||||||||||||| |||||||| |||||||    
T  39052954 acatttatgataaagaagaatgcaccaatacttgataa 39052917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 355 - 392
Target Start/End: Complemental strand, 48400684 - 48400647
Alignment:
Q  355 acatttatgataaagaagaatacaccaatagttgataa 392  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  48400684 acatttatgataaagaagaatacatcaatacttgataa 48400647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 452 - 485
Target Start/End: Original strand, 48400753 - 48400786
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatt 485  Q
    ||||||||||||||||||||||||||| ||||||    
T  48400753 ttaatattgtattgaaaagtgaaatgactcaatt 48400786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 278
Target Start/End: Complemental strand, 49812386 - 49812338
Alignment:
Q  229 actcatttcgcatttattaagaaaaattgtataaatgaaagagagaaaaa 278  Q
    ||||||||| ||| |||||||||||||| |||||||||| ||||||||||    
T  49812386 actcatttcacatgtattaagaaaaatt-tataaatgaaggagagaaaaa 49812338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 67; Significance: 3e-29; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 224 - 318
Target Start/End: Original strand, 7866 - 7960
Alignment:
Q  224 ccttgactcatttcgcatttattaagaaaaattgtataaatgaaagagagaaaaatgagtttgagcgcctttatcaactattggtgtattattct 318  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||||||| | |||||| |||||||||||||||||||| ||| ||||    
T  7866 ccttgactcatttcacatttattaagaaaaaatgtataaatgaaagagagaaaaattattttgagtgcctttatcaactattggtgcatttttct 7960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 3e-29; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 211 - 337
Target Start/End: Complemental strand, 31090481 - 31090352
Alignment:
Q  211 catttaaactgag-ccttgactcatttcgcatttattaagaaaaattgtataaatgaaa--gagagaaaaatgagtttgagcgcctttatcaactattgg 307  Q
    ||||| ||||||| |||||||||||||  |||||||||||||||| ||||||| |||||  ||||||||||||| |||||| ||| ||||||||||||||    
T  31090481 cattttaactgagtccttgactcattttacatttattaagaaaaaatgtataagtgaaaaagagagaaaaatgattttgagtgcccttatcaactattgg 31090382  T
Q  308 tgtattattctttatcataaatgcaaagta 337  Q
    || ||| |||||||||||||| ||||||||    
T  31090381 tgcattcttctttatcataaacgcaaagta 31090352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 226 - 337
Target Start/End: Original strand, 5147443 - 5147556
Alignment:
Q  226 ttgactcatttcgcatttattaagaaaaattgtataaatgaaaga--gagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatc 323  Q
    |||||||||||| || ||||||||||||| | ||||| |||||||  ||||||||||| |||||| | | |||||||||||||||| ||| |||||||||    
T  5147443 ttgactcatttcacacttattaagaaaaaatatataagtgaaagaaagagaaaaatgattttgagtgtccttatcaactattggtgcattcttctttatc 5147542  T
Q  324 ataaatgcaaagta 337  Q
    ||||||||||||||    
T  5147543 ataaatgcaaagta 5147556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 224 - 337
Target Start/End: Original strand, 13016309 - 13016423
Alignment:
Q  224 ccttgactcatttcgcatttattaagaaaaattgtataaatgaaagag--agaaaaatgagtttgagcgcctttatcaactattggtgtattattcttta 321  Q
    ||||| |||||||| || ||||||||||||| |||| || ||||||||  ||||||||||||||||| | | |||||||||||||||| |||  ||||||    
T  13016309 ccttggctcatttcacacttattaagaaaaagtgtaaaagtgaaagagagagaaaaatgagtttgagtgtccttatcaactattggtgcatt-ctcttta 13016407  T
Q  322 tcataaatgcaaagta 337  Q
    ||||||||||||||||    
T  13016408 tcataaatgcaaagta 13016423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 224 - 337
Target Start/End: Original strand, 13087687 - 13087801
Alignment:
Q  224 ccttgactcatttcgcatttattaagaaaaattgtataaatgaaagag--agaaaaatgagtttgagcgcctttatcaactattggtgtattattcttta 321  Q
    ||||| |||||||| || ||||||||||||| |||| || ||||||||  ||||||||||||||||| | | |||||||||||||||| |||  ||||||    
T  13087687 ccttggctcatttcacacttattaagaaaaagtgtaaaagtgaaagagagagaaaaatgagtttgagtgtccttatcaactattggtgcatt-ctcttta 13087785  T
Q  322 tcataaatgcaaagta 337  Q
    ||||||||||||||||    
T  13087786 tcataaatgcaaagta 13087801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 211 - 337
Target Start/End: Complemental strand, 38979081 - 38978952
Alignment:
Q  211 catttaaactgagcc-ttgactcatttcgcatttattaagaaaaattgtataaatgaaagaga--gaaaaatgagtttgagcgcctttatcaactattgg 307  Q
    ||||| ||||||||| || ||||||||| || ||||||||||||| |||| ||  ||||||||  ||||||||  |||||| ||| |||| |||||||||    
T  38979081 cattttaactgagccatttactcatttcacacttattaagaaaaagtgtacaagggaaagagatagaaaaatggttttgagtgcccttattaactattgg 38978982  T
Q  308 tgtattattctttatcataaatgcaaagta 337  Q
    |  |||  ||||||||||||||||||||||    
T  38978981 tacattcctctttatcataaatgcaaagta 38978952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 226 - 337
Target Start/End: Complemental strand, 42819064 - 42818951
Alignment:
Q  226 ttgactcatttcgcatttattaagaaaaattgtataaatgaaagag--agaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatc 323  Q
    |||||||||||| || ||||||||||||| ||||||| | ||||||  |||||||||  |||||| ||| |||| ||  ||||||| ||| |||||||||    
T  42819064 ttgactcatttcacacttattaagaaaaagtgtataagtaaaagagaaagaaaaatggttttgagtgcccttattaatcattggtgcattcttctttatc 42818965  T
Q  324 ataaatgcaaagta 337  Q
    ||||||| ||||||    
T  42818964 ataaatgtaaagta 42818951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 211 - 337
Target Start/End: Complemental strand, 4195110 - 4194980
Alignment:
Q  211 catttaaactgagcc-ttgactcatttcgcatttattaagaaaaat-tgtataaatgaaagagaga--aaaatgagtttgagcgcctttatcaactattg 306  Q
    ||||| ||||||||| ||||| |||||| || |||||||||||||  ||||||| | |||||||||  ||||||  |||||| ||| |||| ||||||||    
T  4195110 cattttaactgagcccttgacgcatttcacacttattaagaaaaaagtgtataagtaaaagagagagaaaaatggttttgagtgcccttatgaactattg 4195011  T
Q  307 gtgtattattctttatcataaatgcaaagta 337  Q
     || ||| |||||||||||||||| ||||||    
T  4195010 atgcattcttctttatcataaatgaaaagta 4194980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 226 - 337
Target Start/End: Original strand, 39060898 - 39061014
Alignment:
Q  226 ttgactcatttcgcatttattaagaaaaattgta---taaatgaaagag--agaaaaatgagtttgagcgcctttatcaactattggtgtattattcttt 320  Q
    |||||||||||| || ||||||||||||| ||||   ||| ||||||||  ||||||||||||||||| | | || ||||| | | ||| ||| ||||||    
T  39060898 ttgactcatttcacacttattaagaaaaaatgtagtataagtgaaagagagagaaaaatgagtttgagtgtccttgtcaaccactagtgcattcttcttt 39060997  T
Q  321 atcataaatgcaaagta 337  Q
    |||||||||||||||||    
T  39060998 atcataaatgcaaagta 39061014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 337
Target Start/End: Original strand, 15564844 - 15564948
Alignment:
Q  230 ctcatttcgcatttattaagaaaaattgtataaatgaa--agagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataa 327  Q
    |||||||| || ||||||||||||| ||||||| ||||  |||||||||||| | ||||||  || |||||||||||||||| ||     ||||||||||    
T  15564844 ctcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaataattttgagtacccttatcaactattggtgcat-----tttatcataa 15564938  T
Q  328 atgcaaagta 337  Q
    ||||||||||    
T  15564939 atgcaaagta 15564948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 452 - 489
Target Start/End: Original strand, 13016488 - 13016525
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttc 489  Q
    ||||||||||||||||||||||||||||||||||||||    
T  13016488 ttaatattgtattgaaaagtgaaatgagtcaatttttc 13016525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 268 - 337
Target Start/End: Complemental strand, 15898308 - 15898239
Alignment:
Q  268 agagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    |||||||||||||||||| || | | |||| |||||||| || ||| |||||||||||||||||||||||    
T  15898308 agagagaaaaatgagtttaagtgtccttattaactattgatgcattcttctttatcataaatgcaaagta 15898239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 358 - 403
Target Start/End: Original strand, 31090361 - 31090406
Alignment:
Q  358 tttatgataaagaagaatacaccaatagttgataagggcgctcaaa 403  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||    
T  31090361 tttatgataaagaagaatgcaccaatagttgataagggcactcaaa 31090406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 7871405 - 7871361
Alignment:
Q  293 tttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||    
T  7871405 tttatcaactattggtgtatttttctttatcataaatgtaaagta 7871361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 452 - 488
Target Start/End: Original strand, 13087866 - 13087902
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaattttt 488  Q
    |||||||||||||||||||||||||||||||||||||    
T  13087866 ttaatattgtattgaaaagtgaaatgagtcaattttt 13087902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 452 - 488
Target Start/End: Complemental strand, 20369259 - 20369223
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaattttt 488  Q
    |||||||||||||||||||||||||||||||||||||    
T  20369259 ttaatattgtattgaaaagtgaaatgagtcaattttt 20369223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 452 - 499
Target Start/End: Complemental strand, 4194624 - 4194577
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    |||||||||||||||||||||||||| || ||||||||| ||||||||    
T  4194624 ttaatattgtattgaaaagtgaaatgggttaatttttctgggacaata 4194577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 356 - 403
Target Start/End: Complemental strand, 5147549 - 5147502
Alignment:
Q  356 catttatgataaagaagaatacaccaatagttgataagggcgctcaaa 403  Q
    |||||||||||||||||||| |||||||||||||||||| | ||||||    
T  5147549 catttatgataaagaagaatgcaccaatagttgataaggacactcaaa 5147502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 452 - 499
Target Start/End: Original strand, 9426677 - 9426724
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    |||||||||||||||||||||||||||||||||| || | ||||||||    
T  9426677 ttaatattgtattgaaaagtgaaatgagtcaattattttaggacaata 9426724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 452 - 499
Target Start/End: Complemental strand, 13598013 - 13597966
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    |||||||||||||||||||||||||||||||||| || | ||||||||    
T  13598013 ttaatattgtattgaaaagtgaaatgagtcaattattttaggacaata 13597966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 452 - 499
Target Start/End: Original strand, 39061078 - 39061125
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    ||||||||||||||||||||||||||| |||||||||||  |||||||    
T  39061078 ttaatattgtattgaaaagtgaaatgaatcaatttttctatgacaata 39061125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 452 - 490
Target Start/End: Complemental strand, 15898176 - 15898138
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttct 490  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  15898176 ttaatattgtattgaaaagtgaaataagtcaatttttct 15898138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 355 - 392
Target Start/End: Original strand, 7871367 - 7871404
Alignment:
Q  355 acatttatgataaagaagaatacaccaatagttgataa 392  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  7871367 acatttatgataaagaaaaatacaccaatagttgataa 7871404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 39212519 - 39212555
Alignment:
Q  243 tattaagaaaaattgtataaatgaaagagagaaaaat 279  Q
    |||||||||||||||||||| ||||||||||||||||    
T  39212519 tattaagaaaaattgtataagtgaaagagagaaaaat 39212555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 456 - 499
Target Start/End: Original strand, 72233 - 72276
Alignment:
Q  456 tattgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    |||||||||||||||||||||| |||||||||| | ||||||||    
T  72233 tattgtattgaaaagtgaaatgggtcaatttttttgggacaata 72276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 337
Target Start/End: Original strand, 4044450 - 4044537
Alignment:
Q  251 aaaattgtataaatgaaa-gagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    |||| ||||||||||||| || | ||||| || |||||  || |||||||| |||||||| ||| |||||||||||||||| ||||||    
T  4044450 aaaagtgtataaatgaaaagaaaaaaaaaagattttgaatgcttttatcaagtattggtgcattcttctttatcataaatgtaaagta 4044537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 356 - 403
Target Start/End: Original strand, 4194987 - 4195034
Alignment:
Q  356 catttatgataaagaagaatacaccaatagttgataagggcgctcaaa 403  Q
    |||||||||||||||||||| || |||||||| |||||||| ||||||    
T  4194987 catttatgataaagaagaatgcatcaatagttcataagggcactcaaa 4195034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 337
Target Start/End: Original strand, 25111101 - 25111208
Alignment:
Q  230 ctcatttcgcatttattaagaaaaattgtataaatgaaagagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaat 329  Q
    |||||||| ||  |||||||||||   ||| || ||||||||||||||||   |||||| | |||| |||| ||||| || ||| |||||||||||||||    
T  25111101 ctcatttcacacatattaagaaaaggagtaaaagtgaaagagagaaaaatagttttgagtgtctttgtcaagtattgctgcattcttctttatcataaat 25111200  T
Q  330 gcaaagta 337  Q
    | ||||||    
T  25111201 gtaaagta 25111208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 337
Target Start/End: Original strand, 25170192 - 25170299
Alignment:
Q  230 ctcatttcgcatttattaagaaaaattgtataaatgaaagagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaat 329  Q
    |||||||| ||  |||||||||||   ||| || ||||||||||||||||   |||||| | |||| |||| ||||| || ||| |||||||||||||||    
T  25170192 ctcatttcacacatattaagaaaaggagtaaaagtgaaagagagaaaaatagttttgagtgtctttgtcaagtattgctgcattcttctttatcataaat 25170291  T
Q  330 gcaaagta 337  Q
    | ||||||    
T  25170292 gtaaagta 25170299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 452 - 499
Target Start/End: Complemental strand, 34534908 - 34534861
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    ||||||||||||||||||||||| ||| ||||||||| | ||||||||    
T  34534908 ttaatattgtattgaaaagtgaactgaatcaatttttttgggacaata 34534861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 277
Target Start/End: Original strand, 6629360 - 6629394
Alignment:
Q  243 tattaagaaaaattgtataaatgaaagagagaaaa 277  Q
    |||||||||||| ||||||||||||||||||||||    
T  6629360 tattaagaaaaagtgtataaatgaaagagagaaaa 6629394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 339
Target Start/End: Original strand, 17741142 - 17741232
Alignment:
Q  250 aaaaattgtataaatgaaagagagaaaaatgagtttgagcgcctttatcaactattggtgtatt-attctttatcataaatgcaaagtata 339  Q
    ||||| ||||||||||||||||||||||||   |||||| |||||| | || ||||| || |||  || ||||||||||||| ||||||||    
T  17741142 aaaaagtgtataaatgaaagagagaaaaatagttttgagtgcctttgttaagtattgatgcattctttttttatcataaatgtaaagtata 17741232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 452 - 498
Target Start/End: Complemental strand, 31090288 - 31090242
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttctcggacaat 498  Q
    ||||||||||||||||||||||||||||| | |||| || |||||||    
T  31090288 ttaatattgtattgaaaagtgaaatgagttatttttactgggacaat 31090242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 337
Target Start/End: Original strand, 39060374 - 39060482
Alignment:
Q  230 ctcatttcgcatttattaagaaaaattgtataaatgaa--agagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataa 327  Q
    |||||||| || ||||||||||||||  ||| | ||||  |||||||||||||  |||||| || ||| | || |||||||  ||| |||||||||||||    
T  39060374 ctcatttcacacttattaagaaaaata-tattagtgaaggagagagaaaaatggttttgagtgcatttgttaagtattggtccattcttctttatcataa 39060472  T
Q  328 atgcaaagta 337  Q
    ||||||||||    
T  39060473 atgcaaagta 39060482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 355 - 392
Target Start/End: Complemental strand, 4044531 - 4044494
Alignment:
Q  355 acatttatgataaagaagaatacaccaatagttgataa 392  Q
    ||||||||||||||||||||| |||||||| |||||||    
T  4044531 acatttatgataaagaagaatgcaccaatacttgataa 4044494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 452 - 485
Target Start/End: Original strand, 4044600 - 4044633
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatt 485  Q
    ||||||||||||||||||||||||||| ||||||    
T  4044600 ttaatattgtattgaaaagtgaaatgattcaatt 4044633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 339
Target Start/End: Complemental strand, 25108728 - 25108619
Alignment:
Q  230 ctcatttcgcatttattaagaaaaattgtataaatgaaagagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaat 329  Q
    |||||||| ||  |||||||||||   ||| || ||||||||||||||||   |||||| | |||| | || ||||| || ||| |||||||||||||||    
T  25108728 ctcatttcacacatattaagaaaaggagtaaaagtgaaagagagaaaaatagttttgagtgtctttgttaagtattgctgcattcttctttatcataaat 25108629  T
Q  330 gcaaagtata 339  Q
    | ||||||||    
T  25108628 gtaaagtata 25108619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 339
Target Start/End: Complemental strand, 25167820 - 25167711
Alignment:
Q  230 ctcatttcgcatttattaagaaaaattgtataaatgaaagagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaat 329  Q
    |||||||| ||  |||||||||||   ||| || ||||||||||||||||   |||||| | |||| | || ||||| || ||| |||||||||||||||    
T  25167820 ctcatttcacacatattaagaaaaggagtaaaagtgaaagagagaaaaatagttttgagtgtctttgttaagtattgctgcattcttctttatcataaat 25167721  T
Q  330 gcaaagtata 339  Q
    | ||||||||    
T  25167720 gtaaagtata 25167711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 337
Target Start/End: Original strand, 36006861 - 36006952
Alignment:
Q  244 attaagaaaaattgtataaatgaaagagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    |||||||||||| |||||||| |||||||||||| ||  ||| || | |||| |||| |||| ||| ||| |||||||||||||||| ||||||    
T  36006861 attaagaaaaat-gtataaataaaagagagaaaa-tggttttaagtgtctttgtcaagtatttgtgcattcttctttatcataaatgtaaagta 36006952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 3e-29; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 226 - 337
Target Start/End: Complemental strand, 13222229 - 13222116
Alignment:
Q  226 ttgactcatttcgcatttattaagaaaaattgtataaatgaaagagaga--aaaatgagtttgagcgcctttatcaactattggtgtattattctttatc 323  Q
    |||||| ||||| || ||||||||||||| ||||||| |||||||||||  |||||| ||||||| ||| |||||||||||||||||||| |||||||||    
T  13222229 ttgacttatttcacacttattaagaaaaaatgtataagtgaaagagagagaaaaatgggtttgagtgcccttatcaactattggtgtattcttctttatc 13222130  T
Q  324 ataaatgcaaagta 337  Q
    ||||||||||||||    
T  13222129 ataaatgcaaagta 13222116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 211 - 334
Target Start/End: Original strand, 928469 - 928594
Alignment:
Q  211 catttaaactgagcc-ttgactcatttcgcatttattaagaaaaattgtataaatgaaagagagaaaaa-tgagtttgagcgcctttatcaactattggt 308  Q
    ||||| ||||||||| ||| |||||||| || |||||||||||||  |||||| ||||||||| ||||| || ||||||| |||||||||||||||||||    
T  928469 cattttaactgagcccttggctcatttcacacttattaagaaaaaacgtataagtgaaagagaaaaaaaatgggtttgagtgcctttatcaactattggt 928568  T
Q  309 gtattattctttatcataaatgcaaa 334  Q
    | ||| ||||||||||||||||||||    
T  928569 gcattcttctttatcataaatgcaaa 928594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 226 - 337
Target Start/End: Original strand, 6972487 - 6972599
Alignment:
Q  226 ttgactcatttcgcatttattaagaaaaattgtataaatgaaagagaga-aaaatgagtttgagcgcctttatcaactattggtgtattattctttatca 324  Q
    |||||||||||| || ||||||||||||| ||||||| ||||||||||| ||||||  |||||| ||| |||||||||||| ||| ||| ||||||||||    
T  6972487 ttgactcatttcacacttattaagaaaaaatgtataagtgaaagagagagaaaatggttttgagtgcccttatcaactatttgtgcattcttctttatca 6972586  T
Q  325 taaatgcaaagta 337  Q
    |||||||||||||    
T  6972587 taaatgcaaagta 6972599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 226 - 337
Target Start/End: Complemental strand, 314588 - 314475
Alignment:
Q  226 ttgactcatttcgcatttattaagaaaaattgtataaatgaaagagaga--aaaatgagtttgagcgcctttatcaactattggtgtattattctttatc 323  Q
    |||||||||||| || ||||||||||||| ||||||| |||||||||||  ||||||  |||||| ||| ||||||||||||| || ||| |||||||||    
T  314588 ttgactcatttcacacttattaagaaaaagtgtataagtgaaagagagaggaaaatggttttgagtgcccttatcaactattgatgcattcttctttatc 314489  T
Q  324 ataaatgcaaagta 337  Q
    ||||||||||||||    
T  314488 ataaatgcaaagta 314475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 244 - 336
Target Start/End: Complemental strand, 7213617 - 7213524
Alignment:
Q  244 attaagaaaaattgtataaatgaaa--gagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagt 336  Q
    |||||||||||| ||||||||||||  ||||||||||||| |||||| ||||||||||| |||||||| ||| |||||||| ||||||| |||||    
T  7213617 attaagaaaaat-gtataaatgaaatagagagaaaaatgattttgagtgcctttatcaaatattggtgcattcttctttattataaatgtaaagt 7213524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 226 - 334
Target Start/End: Original strand, 43427033 - 43427142
Alignment:
Q  226 ttgactcatttcgcatttattaagaaaaattgtataaatgaaagagagaaaaatgagtttgagcgcctttat-caactattggtgtattattctttatca 324  Q
    ||||||||||||  | || |||||||||| ||||||||||||||||||||||||  ||||||| ||| || |  ||||||| ||| ||| ||||||||||    
T  43427033 ttgactcatttcatactttttaagaaaaagtgtataaatgaaagagagaaaaataggtttgagtgcccttgtgaaactattagtgcattcttctttatca 43427132  T
Q  325 taaatgcaaa 334  Q
    ||||||||||    
T  43427133 taaatgcaaa 43427142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 356 - 403
Target Start/End: Original strand, 13222123 - 13222170
Alignment:
Q  356 catttatgataaagaagaatacaccaatagttgataagggcgctcaaa 403  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  13222123 catttatgataaagaagaatacaccaatagttgataagggcactcaaa 13222170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 226 - 337
Target Start/End: Complemental strand, 2048452 - 2048340
Alignment:
Q  226 ttgactcatttcgcatttattaagaaaaattgtataaatgaaagagaga--aaaatgagtttgagcgcctttatcaactattggtgtattattctttatc 323  Q
    |||||||||||| || ||||||| |||||| |||||| |||||||||||  ||||||  | |||| ||  |||||||||||||||| ||| || ||||||    
T  2048452 ttgactcatttcacacttattaaaaaaaat-gtataagtgaaagagagagaaaaatggttatgagtgctcttatcaactattggtgcattcttgtttatc 2048354  T
Q  324 ataaatgcaaagta 337  Q
    ||||||||||||||    
T  2048353 ataaatgcaaagta 2048340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 230 - 337
Target Start/End: Complemental strand, 9725034 - 9724926
Alignment:
Q  230 ctcatttcgcatttattaagaaaaattgtataaatgaaagagagaaa--aatgagtttgagcgcctttatcaactattggtgtattattctttatcataa 327  Q
    |||||||| ||  ||||||||||| | |||||||||||||||||| |  ||||| |||||| || |||||||| |||||||| ||| |||||||||||||    
T  9725034 ctcatttcacacatattaagaaaagt-gtataaatgaaagagagagagaaatgattttgagtgcttttatcaagtattggtgcattcttctttatcataa 9724936  T
Q  328 atgcaaagta 337  Q
    ||| ||||||    
T  9724935 atgtaaagta 9724926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 337
Target Start/End: Complemental strand, 31348628 - 31348559
Alignment:
Q  268 agagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    ||||||||||||| ||||||| ||| |||||||||||||||| ||| || ||||||||||||||| ||||    
T  31348628 agagagaaaaatgggtttgagtgcccttatcaactattggtgcattcttttttatcataaatgcatagta 31348559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 330
Target Start/End: Complemental strand, 14890455 - 14890372
Alignment:
Q  246 taagaaaaattgtataaatgaaagagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatg 330  Q
    |||||||||| |||||||||||||||| |||||||  |||||| | ||||||||| |||| ||| ||| ||||||||||||||||    
T  14890455 taagaaaaat-gtataaatgaaagagataaaaatggttttgagtgtctttatcaagtattagtgcattcttctttatcataaatg 14890372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 337
Target Start/End: Original strand, 38280160 - 38280255
Alignment:
Q  243 tattaagaaaaattgtataaatgaaa--gagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    ||||||||||||| ||||||| ||||  ||||||||||||  |||||| |||||| | || |||||||| ||| |||||||||||||||| ||||||    
T  38280160 tattaagaaaaat-gtataaaggaaatagagagaaaaatggttttgagtgccttttttaaatattggtgcattcttctttatcataaatgtaaagta 38280255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 452 - 499
Target Start/End: Complemental strand, 314419 - 314372
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    ||||||||||||||||||||||||||  ||||||||||| ||||||||    
T  314419 ttaatattgtattgaaaagtgaaatggatcaatttttctaggacaata 314372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 356 - 403
Target Start/End: Original strand, 314482 - 314529
Alignment:
Q  356 catttatgataaagaagaatacaccaatagttgataagggcgctcaaa 403  Q
    |||||||||||||||||||| || ||||||||||||||||| ||||||    
T  314482 catttatgataaagaagaatgcatcaatagttgataagggcactcaaa 314529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 356 - 403
Target Start/End: Complemental strand, 928590 - 928543
Alignment:
Q  356 catttatgataaagaagaatacaccaatagttgataagggcgctcaaa 403  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||    
T  928590 catttatgataaagaagaatgcaccaatagttgataaaggcactcaaa 928543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 356 - 403
Target Start/End: Complemental strand, 6972592 - 6972545
Alignment:
Q  356 catttatgataaagaagaatacaccaatagttgataagggcgctcaaa 403  Q
    |||||||||||||||||||| ||| |||||||||||||||| ||||||    
T  6972592 catttatgataaagaagaatgcacaaatagttgataagggcactcaaa 6972545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 452 - 499
Target Start/End: Complemental strand, 31348495 - 31348448
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    |||||||||||||||||| ||||||| |||||||||||| ||||||||    
T  31348495 ttaatattgtattgaaaattgaaatgggtcaatttttctaggacaata 31348448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 356 - 403
Target Start/End: Original strand, 31348566 - 31348613
Alignment:
Q  356 catttatgataaagaagaatacaccaatagttgataagggcgctcaaa 403  Q
    ||||||||||||| |||||| |||||||||||||||||||| ||||||    
T  31348566 catttatgataaaaaagaatgcaccaatagttgataagggcactcaaa 31348613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 456 - 499
Target Start/End: Complemental strand, 31592531 - 31592488
Alignment:
Q  456 tattgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    ||||||||||||||||||||||||||||||||| | ||||||||    
T  31592531 tattgtattgaaaagtgaaatgagtcaatttttttgggacaata 31592488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 452 - 487
Target Start/End: Original strand, 43427486 - 43427521
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttt 487  Q
    ||||||||||||||||||||||||||||||||||||    
T  43427486 ttaatattgtattgaaaagtgaaatgagtcaatttt 43427521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 337
Target Start/End: Complemental strand, 2427517 - 2427408
Alignment:
Q  230 ctcatttcgcatttattaagaaaaattgtataaatgaaaga--gagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataa 327  Q
    ||||||||  ||||||||||||||| ||||||| ||| | |  |||||||||| ||||||  ||| |||| || |||||| | ||| |||||| ||||||    
T  2427517 ctcatttcatatttattaagaaaaagtgtataactgacatatagagaaaaatgggtttgaatgcccttattaattattggagcattcttctttgtcataa 2427418  T
Q  328 atgcaaagta 337  Q
    ||||||||||    
T  2427417 atgcaaagta 2427408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 337
Target Start/End: Complemental strand, 18460624 - 18460536
Alignment:
Q  251 aaaattgtataaatgaaagag--agaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    |||| ||||||||||||||||  |||||||||| |||||| | |||| |||| |||||||  ||| |||||| ||||||||| ||||||    
T  18460624 aaaagtgtataaatgaaagagatagaaaaatgattttgagtgtctttgtcaaatattggtacattcttctttgtcataaatgtaaagta 18460536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 452 - 488
Target Start/End: Complemental strand, 3199877 - 3199841
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaattttt 488  Q
    ||||||||||||||||||||| |||||||||||||||    
T  3199877 ttaatattgtattgaaaagtgcaatgagtcaattttt 3199841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 452 - 499
Target Start/End: Original strand, 6972667 - 6972714
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    ||||||||||||||||||||||||||  | ||||||||| ||||||||    
T  6972667 ttaatattgtattgaaaagtgaaatggataaatttttctgggacaata 6972714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 452 - 499
Target Start/End: Complemental strand, 13222052 - 13222006
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    |||||||||||||||||||||||||| |||||||||| | ||||||||    
T  13222052 ttaatattgtattgaaaagtgaaatg-gtcaatttttatgggacaata 13222006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 452 - 498
Target Start/End: Complemental strand, 9724865 - 9724819
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttctcggacaat 498  Q
    ||||||||||||||||||||||||||  ||||||||| | |||||||    
T  9724865 ttaatattgtattgaaaagtgaaatggctcaatttttttgggacaat 9724819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 356 - 393
Target Start/End: Original strand, 2048347 - 2048384
Alignment:
Q  356 catttatgataaagaagaatacaccaatagttgataag 393  Q
    ||||||||||||| |||||| |||||||||||||||||    
T  2048347 catttatgataaacaagaatgcaccaatagttgataag 2048384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 355 - 396
Target Start/End: Complemental strand, 4283072 - 4283031
Alignment:
Q  355 acatttatgataaagaagaatacaccaatagttgataagggc 396  Q
    |||||||||||||||| |||| |||||||| |||||||||||    
T  4283072 acatttatgataaagaggaatgcaccaatacttgataagggc 4283031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 452 - 485
Target Start/End: Complemental strand, 8385060 - 8385027
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatt 485  Q
    ||||||||||||||||||||||||| ||||||||    
T  8385060 ttaatattgtattgaaaagtgaaataagtcaatt 8385027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 355 - 392
Target Start/End: Original strand, 9724932 - 9724969
Alignment:
Q  355 acatttatgataaagaagaatacaccaatagttgataa 392  Q
    ||||||||||||||||||||| |||||||| |||||||    
T  9724932 acatttatgataaagaagaatgcaccaatacttgataa 9724969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 337
Target Start/End: Original strand, 12949916 - 12950023
Alignment:
Q  231 tcatttcgcatttattaagaaaaattgtataaatgaaagagagaaaaa--tgagtttgagcgcctttatcaactattggtgtattattctttatcataaa 328  Q
    ||||||| ||| ||||| |||||| ||||||| |||||||||||||||  | | |||||| | |||  |||| |||||||| |||  | |||||||||||    
T  12949916 tcatttcacatatattacgaaaaaatgtataagtgaaagagagaaaaaaataattttgagtgtcttg-tcaagtattggtgaattcctttttatcataaa 12950014  T
Q  329 tgcaaagta 337  Q
    |||||||||    
T  12950015 tgcaaagta 12950023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 452 - 485
Target Start/End: Original strand, 15859465 - 15859498
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatt 485  Q
    ||||||||||||||||||||||||||| ||||||    
T  15859465 ttaatattgtattgaaaagtgaaatgactcaatt 15859498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 43182414 - 43182327
Alignment:
Q  244 attaagaaaaattgtataaatgaaagagaga--aaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatg 330  Q
    |||||||||||| ||||||| ||||||||||  ||||| | |||||| | |||| |||| |||||||| ||| |||||||| |||||||    
T  43182414 attaagaaaaat-gtataaaggaaagagagaaaaaaataattttgagtgtctttgtcaaatattggtgcattcttctttattataaatg 43182327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 3e-26; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 228 - 337
Target Start/End: Original strand, 9734117 - 9734226
Alignment:
Q  228 gactcatttcgcatttattaagaaaaattgtataaatgaaagagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataa 327  Q
    |||||||||| |||||||||| ||||| |||||||||||||||||||||||||  ||||||     |||||||||||||||| ||| |||||||||||||    
T  9734117 gactcatttcacatttattaaaaaaaaatgtataaatgaaagagagaaaaatggatttgagtattcttatcaactattggtgcattcttctttatcataa 9734216  T
Q  328 atgcaaagta 337  Q
    ||||||||||    
T  9734217 atgcaaagta 9734226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 217 - 337
Target Start/End: Original strand, 25174521 - 25174644
Alignment:
Q  217 aactgagcctt-gactcatttcgcatttattaagaaaaattgtataaatgaaagagagaaaa--atgagtttgagcgcctttatcaactattggtgtatt 313  Q
    ||||||||||| ||||||||||  ||||||||||||||| ||||||| | ||||||||||||  |||| |||||| ||| |||| ||||||||||| |||    
T  25174521 aactgagcctttgactcatttcatatttattaagaaaaaatgtataagtaaaagagagaaaagaatgattttgagtgcccttattaactattggtgcatt 25174620  T
Q  314 attctttatcataaatgcaaagta 337  Q
    ||||||||| ||||||||||||||    
T  25174621 attctttattataaatgcaaagta 25174644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 211 - 337
Target Start/End: Complemental strand, 14690137 - 14690008
Alignment:
Q  211 catttaaactgagcc-ttgactcatttcgcatttattaagaaaaattgtataaatgaaagagaga--aaaatgagtttgagcgcctttatcaactattgg 307  Q
    ||||| ||||||||| |||||||||||| || ||||||||||||| ||||||| |||||||||||  ||||||  |||||| | | ||||||||||||||    
T  14690137 cattttaactgagcccttgactcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatggttttgagtgtccttatcaactattgg 14690038  T
Q  308 tgtattattctttatcataaatgcaaagta 337  Q
    || ||| || ||||||||||||||||||||    
T  14690037 tgcattcttttttatcataaatgcaaagta 14690008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 224 - 330
Target Start/End: Original strand, 32231330 - 32231438
Alignment:
Q  224 ccttgactcatttcgcatttattaagaaaaattgtataaatgaaagagaga--aaaatgagtttgagcgcctttatcaactattggtgtattattcttta 321  Q
    ||||| |||||||| |||||||||||||||| ||||||| |||||||||||  ||||||  |||||| ||| ||||||||||||| |||||| |||||||    
T  32231330 ccttgtctcatttcacatttattaagaaaaaatgtataagtgaaagagagaggaaaatggttttgagtgcccttatcaactattgatgtattcttcttta 32231429  T
Q  322 tcataaatg 330  Q
    |||||||||    
T  32231430 tcataaatg 32231438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 211 - 337
Target Start/End: Original strand, 14748634 - 14748765
Alignment:
Q  211 catttaaactgagcc-ttgactcatttcgcatttattaagaaaaattgtataaatgaaagagaga----aaaatgagtttgagcgcctttatcaactatt 305  Q
    ||||| ||||||||| |||||||||||  || ||||||||||||| ||||||| |||||||||||    || ||| ||||||| ||  ||||||||||||    
T  14748634 cattttaactgagcccttgactcattttacacttattaagaaaaagtgtataagtgaaagagagagagaaatatgggtttgagtgctcttatcaactatt 14748733  T
Q  306 ggtgtattattctttatcataaatgcaaagta 337  Q
     ||| ||| |||||||||||||||||||||||    
T  14748734 agtgcattcttctttatcataaatgcaaagta 14748765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 230 - 337
Target Start/End: Original strand, 45420889 - 45420998
Alignment:
Q  230 ctcatttcgcatttattaagaaaaattgtataaatgaaagag--agaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataa 327  Q
    |||||||| || ||||||||||||| ||||||| ||||||||  ||||||||| ||||||| ||| || |||||| |||| | ||| |||||||||||||    
T  45420889 ctcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgggtttgagtgcccttgtcaacttttggagcattcttctttatcataa 45420988  T
Q  328 atgcaaagta 337  Q
    ||||||||||    
T  45420989 atgcaaagta 45420998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 231 - 337
Target Start/End: Complemental strand, 33743932 - 33743824
Alignment:
Q  231 tcatttcgcatttattaagaaaaattgtataaatgaaagagaga--aaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaa 328  Q
    ||||||| || ||||||||||||| |||||||||||||||||||  |||||| ||||||| |   |||||||||||| ||| ||| ||||||||||||||    
T  33743932 tcatttcacacttattaagaaaaagtgtataaatgaaagagagagaaaaatgggtttgagtgtacttatcaactatttgtgcattcttctttatcataaa 33743833  T
Q  329 tgcaaagta 337  Q
    | |||||||    
T  33743832 tacaaagta 33743824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 230 - 337
Target Start/End: Original strand, 1494198 - 1494307
Alignment:
Q  230 ctcatttcgcatttattaagaaaaattgtataaatgaaagag--agaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataa 327  Q
    |||||||| || |||||||| |||| ||||||  ||||||||  |||||||||| |||||| ||| ||||||| ||||| || ||| |||||||||||||    
T  1494198 ctcatttcacacttattaaggaaaaatgtatatgtgaaagagtgagaaaaatgattttgagtgcccttatcaattattgatgcattcttctttatcataa 1494297  T
Q  328 atgcaaagta 337  Q
    ||||||||||    
T  1494298 atgcaaagta 1494307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 224 - 337
Target Start/End: Original strand, 886392 - 886507
Alignment:
Q  224 ccttgactcatttcgcatttattaagaaaaattgtataaatgaaagagagaa--aaatgagtttgagcgcctttatcaactattggtgtattattcttta 321  Q
    ||||| |||||||| || ||||||||||||| |||| || |||||||||||   ||||||||||||  | | |||||||||||  ||| ||| |||||||    
T  886392 ccttggctcatttcacacttattaagaaaaagtgtacaagtgaaagagagagggaaatgagtttgattgtccttatcaactatctgtgcattcttcttta 886491  T
Q  322 tcataaatgcaaagta 337  Q
    ||||||||||||||||    
T  886492 tcataaatgcaaagta 886507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 226 - 332
Target Start/End: Original strand, 8566060 - 8566170
Alignment:
Q  226 ttgactcatttcgcatttattaagaaaaattgtataaatgaaaga--gagaaaaatgagtttgagcgcctttatcaactattggtg--tattattcttta 321  Q
    |||||||||||| || ||||||||||||  ||||||| |||||||  |||||||||| ||||||| ||| ||||||||||||| ||  | || |||||||    
T  8566060 ttgactcatttcacacttattaagaaaacgtgtataagtgaaagagggagaaaaatgtgtttgagtgcccttatcaactattgatgcatttttttcttta 8566159  T
Q  322 tcataaatgca 332  Q
    |||||||||||    
T  8566160 tcataaatgca 8566170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 337
Target Start/End: Original strand, 8394202 - 8394314
Alignment:
Q  229 actcatttcgcatttattaagaaaaattgtataa----atgaaagagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatca 324  Q
    ||||||||| || ||||||||||||| |||||||    | || | |||||||||||||||| |  ||  |||||||||||||||| ||||||||||||||    
T  8394202 actcatttcacacttattaagaaaaagtgtataagtataagagaaagagaaaaatgagtttaaatgctcttatcaactattggtgcattattctttatca 8394301  T
Q  325 taaatgcaaagta 337  Q
    ||||| |||||||    
T  8394302 taaatacaaagta 8394314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 337
Target Start/End: Original strand, 40077721 - 40077809
Alignment:
Q  251 aaaattgtataaatgaaagagagaaaaa--tgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    |||| |||||||||||||||||||||||  ||| |||||| | |||| |||| |||||||| ||| |||||||||||||||| ||||||    
T  40077721 aaaagtgtataaatgaaagagagaaaaaaatgattttgagtgtctttgtcaagtattggtgcattcttctttatcataaatgtaaagta 40077809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 355 - 403
Target Start/End: Complemental strand, 32231439 - 32231391
Alignment:
Q  355 acatttatgataaagaagaatacaccaatagttgataagggcgctcaaa 403  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  32231439 acatttatgataaagaagaatacatcaatagttgataagggcactcaaa 32231391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 243 - 337
Target Start/End: Original strand, 8418269 - 8418361
Alignment:
Q  243 tattaagaaaaattgtataaatgaaagagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    |||||||||||| || |||||||||||||||||||||||  || || |  ||| |||| ||||| || |||||||||||||||||||| ||||||    
T  8418269 tattaagaaaaagtgcataaatgaaagagagaaaaatga--ttcagtgtttttgtcaagtattgatgcattattctttatcataaatgtaaagta 8418361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 452 - 499
Target Start/End: Original strand, 8566529 - 8566576
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||    
T  8566529 ttaatattgtattgaaaagtgaaatgggtcaatttttctaggacaata 8566576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 336
Target Start/End: Complemental strand, 14117598 - 14117511
Alignment:
Q  251 aaaattgtataaatgaaagagaga-aaaatgagttt-gagcgcctttatcaactattggtgtattattctttatcataaatgcaaagt 336  Q
    |||| |||||||| |||||||||| ||||| ||||| ||| |||||| |||| |||||||||||| |||||||||||||||| |||||    
T  14117598 aaaagtgtataaaggaaagagagagaaaattagttttgagtgcctttttcaagtattggtgtattcttctttatcataaatgtaaagt 14117511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 452 - 499
Target Start/End: Complemental strand, 14689944 - 14689897
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||    
T  14689944 ttaatattgtattgaaaagtgaaatgggtcaatttttctgggacaata 14689897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 339
Target Start/End: Complemental strand, 29638437 - 29638347
Alignment:
Q  251 aaaattgtataaatgaaaga--gagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagtata 339  Q
    |||| |||||||||||||||  ||||||||||  |||||  |||||| |||| |||||||  |||||||||||||||||||| ||||||||    
T  29638437 aaaagtgtataaatgaaagaaagagaaaaatggttttgaatgcctttgtcaagtattggttcattattctttatcataaatgtaaagtata 29638347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 452 - 499
Target Start/End: Original strand, 32231843 - 32231890
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||    
T  32231843 ttaatattgtattgaaaagtgaaatgagtcaatttttttgggacaata 32231890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 452 - 490
Target Start/End: Original strand, 886571 - 886609
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttct 490  Q
    |||||||||||||||||||||||||||||||||||||||    
T  886571 ttaatattgtattgaaaagtgaaatgagtcaatttttct 886609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 337
Target Start/End: Complemental strand, 41726661 - 41726569
Alignment:
Q  244 attaagaaaaattgtataaatgaaagagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    |||||||||||| ||||||| |||||||||||| ||   |||||| |||||| |||| ||||| || ||| |||||||||||||||| ||||||    
T  41726661 attaagaaaaat-gtataaaagaaagagagaaatatagttttgagtgcctttttcaagtattgttgcattcttctttatcataaatgtaaagta 41726569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 452 - 499
Target Start/End: Original strand, 13085074 - 13085121
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    ||||||||||||||||||||||||||| ||||||||| | ||||||||    
T  13085074 ttaatattgtattgaaaagtgaaatgaatcaatttttttgggacaata 13085121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 452 - 499
Target Start/End: Original strand, 17790220 - 17790267
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    ||||||||||||||||||||||||| ||| ||||||||| ||||||||    
T  17790220 ttaatattgtattgaaaagtgaaataagtaaatttttctgggacaata 17790267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 452 - 499
Target Start/End: Complemental strand, 33743759 - 33743712
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    |||||||||||||||||||| |||||||||||||||||| | ||||||    
T  33743759 ttaatattgtattgaaaagttaaatgagtcaatttttctggaacaata 33743712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 452 - 499
Target Start/End: Original strand, 43845007 - 43845054
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    |||||||||||||||||||||| |||||||||||||| | ||||||||    
T  43845007 ttaatattgtattgaaaagtgatatgagtcaatttttatgggacaata 43845054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 453 - 499
Target Start/End: Original strand, 8394642 - 8394688
Alignment:
Q  453 taatattgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    |||||||||| ||||||||||||||||||||||||||| | ||||||    
T  8394642 taatattgtactgaaaagtgaaatgagtcaatttttctagaacaata 8394688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 393
Target Start/End: Complemental strand, 9734219 - 9734182
Alignment:
Q  356 catttatgataaagaagaatacaccaatagttgataag 393  Q
    |||||||||||||||||||| |||||||||||||||||    
T  9734219 catttatgataaagaagaatgcaccaatagttgataag 9734182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 337
Target Start/End: Complemental strand, 32679136 - 32679083
Alignment:
Q  284 ttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    ||||| |||||| |||| |||||||| |||||||||||||||||||| ||||||    
T  32679136 ttgagtgcctttttcaagtattggtgcattattctttatcataaatgtaaagta 32679083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 337
Target Start/End: Original strand, 41759620 - 41759689
Alignment:
Q  268 agagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    ||||| ||||||||||||||| | | || |||| |||||||| ||| ||||||||||||||| |||||||    
T  41759620 agagaaaaaaatgagtttgagtgtccttgtcaattattggtgcattcttctttatcataaatacaaagta 41759689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 452 - 488
Target Start/End: Complemental strand, 2797023 - 2796987
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaattttt 488  Q
    |||||||||||||||||||||||||||||||| ||||    
T  2797023 ttaatattgtattgaaaagtgaaatgagtcaagtttt 2796987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 355 - 403
Target Start/End: Original strand, 14117516 - 14117564
Alignment:
Q  355 acatttatgataaagaagaatacaccaatagttgataagggcgctcaaa 403  Q
    |||||||||||||||||||||||||||||| |||| || ||| ||||||    
T  14117516 acatttatgataaagaagaatacaccaatacttgaaaaaggcactcaaa 14117564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 296 - 336
Target Start/End: Complemental strand, 37459439 - 37459399
Alignment:
Q  296 atcaactattggtgtattattctttatcataaatgcaaagt 336  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  37459439 atcaactattgatgtattcttctttatcataaatgcaaagt 37459399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 356 - 403
Target Start/End: Complemental strand, 1494300 - 1494253
Alignment:
Q  356 catttatgataaagaagaatacaccaatagttgataagggcgctcaaa 403  Q
    |||||||||||||||||||| || ||||| ||||||||||| ||||||    
T  1494300 catttatgataaagaagaatgcatcaataattgataagggcactcaaa 1494253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 452 - 499
Target Start/End: Original strand, 9734481 - 9734528
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    ||||||||||||| |||||||||||| ||||||||||||  |||||||    
T  9734481 ttaatattgtattaaaaagtgaaatgggtcaatttttctaagacaata 9734528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 356 - 403
Target Start/End: Original strand, 14690015 - 14690062
Alignment:
Q  356 catttatgataaagaagaatacaccaatagttgataagggcgctcaaa 403  Q
    ||||||||||||| |||||| |||||||||||||||||| | ||||||    
T  14690015 catttatgataaaaaagaatgcaccaatagttgataaggacactcaaa 14690062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 356 - 403
Target Start/End: Complemental strand, 14748758 - 14748711
Alignment:
Q  356 catttatgataaagaagaatacaccaatagttgataagggcgctcaaa 403  Q
    |||||||||||||||||||| ||| ||||||||||||| || ||||||    
T  14748758 catttatgataaagaagaatgcactaatagttgataagagcactcaaa 14748711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 337
Target Start/End: Complemental strand, 39998293 - 39998211
Alignment:
Q  257 gtataaatgaaagagaga--aaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    ||||||||||||||||||  ||||||| ||| || | ||||||||| |||| | | ||| |||||||||||||||| ||||||    
T  39998293 gtataaatgaaagagagagaaaaatgattttaagtgtctttatcaagtatttgagcattcttctttatcataaatgtaaagta 39998211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 452 - 499
Target Start/End: Original strand, 45421063 - 45421110
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    |||||||||||||||||||||||||| || ||||| ||| ||||||||    
T  45421063 ttaatattgtattgaaaagtgaaatgggttaatttatctgggacaata 45421110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 330
Target Start/End: Complemental strand, 28791425 - 28791363
Alignment:
Q  268 agagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatg 330  Q
    ||||||||||||   |||||| |||||| |||| |||||||| ||| ||||||||||||||||    
T  28791425 agagagaaaaatagttttgagtgcctttttcaagtattggtgcattcttctttatcataaatg 28791363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 390
Target Start/End: Original strand, 37459405 - 37459439
Alignment:
Q  356 catttatgataaagaagaatacaccaatagttgat 390  Q
    ||||||||||||||||||||||| |||||||||||    
T  37459405 catttatgataaagaagaatacatcaatagttgat 37459439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 288
Target Start/End: Complemental strand, 15020922 - 15020866
Alignment:
Q  231 tcatttcgcatttattaagaaaaattgtataaatgaaagagagaaaaatgagtttgag 288  Q
    ||||||| ||| ||||||||||| |||||||| | |||||||||||||||| ||||||    
T  15020922 tcatttcacatatattaagaaaa-ttgtataagttaaagagagaaaaatgattttgag 15020866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 452 - 485
Target Start/End: Original strand, 22325078 - 22325111
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatt 485  Q
    ||||||||||||||||||||||||||| ||||||    
T  22325078 ttaatattgtattgaaaagtgaaatgactcaatt 22325111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 452 - 485
Target Start/End: Complemental strand, 33826219 - 33826186
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatt 485  Q
    ||||||||||||||||||||||||| ||||||||    
T  33826219 ttaatattgtattgaaaagtgaaataagtcaatt 33826186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 452 - 481
Target Start/End: Complemental strand, 41726505 - 41726476
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtc 481  Q
    ||||||||||||||||||||||||||||||    
T  41726505 ttaatattgtattgaaaagtgaaatgagtc 41726476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 1e-22; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 229 - 337
Target Start/End: Original strand, 23111038 - 23111148
Alignment:
Q  229 actcatttcgcatttattaagaaaaattgtataaatgaaa--gagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcata 326  Q
    |||||||||  | ||||||||||||| |||||||||||||  ||||||||||||| |||||  | |||||||||||||||||| ||| ||||||||||||    
T  23111038 actcatttcatacttattaagaaaaaatgtataaatgaaatagagagaaaaatgattttgaatgtctttatcaactattggtgcattcttctttatcata 23111137  T
Q  327 aatgcaaagta 337  Q
    |||| ||||||    
T  23111138 aatgtaaagta 23111148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 226 - 337
Target Start/End: Original strand, 32971964 - 32972077
Alignment:
Q  226 ttgactcatttcgcatttattaagaaaaattgtataaatgaaagag--agaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatc 323  Q
    |||||||||||| || ||||||||||||| ||||||| ||||||||  |||||||||  |||||| ||| |||||||||||||||| ||| || ||| ||    
T  32971964 ttgactcatttcacacttattaagaaaaaatgtataagtgaaagagagagaaaaatggttttgagtgcccttatcaactattggtgcattcttttttgtc 32972063  T
Q  324 ataaatgcaaagta 337  Q
    ||||||||||||||    
T  32972064 ataaatgcaaagta 32972077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 230 - 337
Target Start/End: Complemental strand, 47238374 - 47238265
Alignment:
Q  230 ctcatttcgcatttattaagaaaaattgtataaatgaaagagaga--aaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataa 327  Q
    |||||||| || ||||||||||||| ||||||| |||||||||||  ||||||  |||||| ||| |||||||| ||||||| ||| |||||||||||||    
T  47238374 ctcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatggttttgagtgcccttatcaacaattggtgcattcttctttatcataa 47238275  T
Q  328 atgcaaagta 337  Q
    ||||||||||    
T  47238274 atgcaaagta 47238265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 212 - 339
Target Start/End: Original strand, 29996960 - 29997090
Alignment:
Q  212 atttaaactgagcctt-gactcatttcgcatttattaagaaaaattgtataaatgaaagaga--gaaaaatgagtttgagcgcctttatcaactattggt 308  Q
    |||| ||||||||||| |||||||||| || ||||||||||||| ||||||| |||||||||  ||||||||  |||||  | | || | || |||||||    
T  29996960 attttaactgagcctttgactcatttcacacttattaagaaaaagtgtataagtgaaagagaaagaaaaatggttttgaatgtccttgttaattattggt 29997059  T
Q  309 gtattattctttatcataaatgcaaagtata 339  Q
    | ||| |||||||||||||||||||||||||    
T  29997060 gcattcttctttatcataaatgcaaagtata 29997090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 337
Target Start/End: Complemental strand, 37264468 - 37264361
Alignment:
Q  230 ctcatttcgcatttattaagaaaaattgtataaatgaaagagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaat 329  Q
    |||||||| ||  |||||||||||| | ||||| |||||||||||||||||  |||||| ||| || |||| ||||| || |||  ||||||||||||||    
T  37264468 ctcatttcacacatattaagaaaaagtatataagtgaaagagagaaaaatggttttgagtgcccttgtcaagtattgatgcattgctctttatcataaat 37264369  T
Q  330 gcaaagta 337  Q
    ||||||||    
T  37264368 gcaaagta 37264361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 230 - 337
Target Start/End: Complemental strand, 32776140 - 32776031
Alignment:
Q  230 ctcatttcgcatttattaagaaaaattgtataaatgaa--agagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataa 327  Q
    |||||||| ||  |||||||||||| ||||||| ||||  |||||||||||||  |||||| |||||| | || |||||||| ||| |||||||||||||    
T  32776140 ctcatttcacacatattaagaaaaagtgtataagtgaaggagagagaaaaatggttttgagtgcctttgttaagtattggtgcattcttctttatcataa 32776041  T
Q  328 atgcaaagta 337  Q
    ||| ||||||    
T  32776040 atgtaaagta 32776031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 337
Target Start/End: Complemental strand, 36070247 - 36070153
Alignment:
Q  244 attaagaaaaattgtataaatgaaagagaga--aaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    |||||||||||| ||||||||||||||||||  ||||||  |||||| | |||| |||| |||||||| |||||||||||||||||| | ||||||    
T  36070247 attaagaaaaat-gtataaatgaaagagagaggaaaatggttttgagtgtctttgtcaaatattggtgcattattctttatcataaacgtaaagta 36070153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 337
Target Start/End: Original strand, 10355701 - 10355794
Alignment:
Q  246 taagaaaaattgtataaatgaaagagagaaaaa--tgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    ||||||||| ||||||| || ||||||||||||  ||  |||||| | | |||||||||||||||| |||  ||||||||||||||||||||||    
T  10355701 taagaaaaagtgtataagtgtaagagagaaaaaaatggttttgagtgtccttatcaactattggtgcatttctctttatcataaatgcaaagta 10355794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 337
Target Start/End: Original strand, 39343644 - 39343730
Alignment:
Q  251 aaaattgtataaatgaaagagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    |||| |||||||||||||||||||| |||   |||||| || ||| |||| |||| ||||||| |||||||||||||||| ||||||    
T  39343644 aaaagtgtataaatgaaagagagaacaatcgttttgagtgcatttgtcaagtatttgtgtattcttctttatcataaatgtaaagta 39343730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 268 - 337
Target Start/End: Complemental strand, 38589851 - 38589782
Alignment:
Q  268 agagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    |||||||||||||  |||||  ||| |||||||||||||||| ||| |||||||||||||||| ||||||    
T  38589851 agagagaaaaatggttttgaatgcccttatcaactattggtgcattcttctttatcataaatgtaaagta 38589782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 355 - 396
Target Start/End: Original strand, 38589788 - 38589829
Alignment:
Q  355 acatttatgataaagaagaatacaccaatagttgataagggc 396  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  38589788 acatttatgataaagaagaatgcaccaatagttgataagggc 38589829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 452 - 488
Target Start/End: Original strand, 40023849 - 40023885
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaattttt 488  Q
    |||||||||||||||||||||||||||||||||||||    
T  40023849 ttaatattgtattgaaaagtgaaatgagtcaattttt 40023885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 452 - 499
Target Start/End: Original strand, 32972393 - 32972440
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    |||||||||||||| |||||||||||||||||||||| | ||||||||    
T  32972393 ttaatattgtattggaaagtgaaatgagtcaatttttatgggacaata 32972440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 356 - 403
Target Start/End: Original strand, 47238272 - 47238319
Alignment:
Q  356 catttatgataaagaagaatacaccaatagttgataagggcgctcaaa 403  Q
    |||||||||||||||||||| ||||||| |||||||||||| ||||||    
T  47238272 catttatgataaagaagaatgcaccaattgttgataagggcactcaaa 47238319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 452 - 490
Target Start/End: Complemental strand, 32345584 - 32345546
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttct 490  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  32345584 ttaatattgtattgaaaagtcaaatgagtcaatttttct 32345546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 452 - 535
Target Start/End: Complemental strand, 47238202 - 47238120
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttctcggacaatannnnnnnngcaaatggctaaattattatgggacgga 535  Q
    |||||||||||||||||| ||||||  |||||||||||| ||||||||        |||||||||| |||||||||||||||||    
T  47238202 ttaatattgtattgaaaattgaaattggtcaatttttctgggacaata-tttttttgcaaatggctcaattattatgggacgga 47238120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 337
Target Start/End: Complemental strand, 2849398 - 2849303
Alignment:
Q  243 tattaagaaaaattgtataaatgaaagagaga--aaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    ||||||||||||| ||||||||||||||||||  |||||   |||| | | |||| |||| |||||||| ||| |||||||||||||||| ||||||    
T  2849398 tattaagaaaaat-gtataaatgaaagagagagaaaaatagttttgcgtgtctttgtcaagtattggtgcattcttctttatcataaatgtaaagta 2849303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 355 - 392
Target Start/End: Complemental strand, 23111142 - 23111105
Alignment:
Q  355 acatttatgataaagaagaatacaccaatagttgataa 392  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  23111142 acatttatgataaagaagaatgcaccaatagttgataa 23111105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 337
Target Start/End: Original strand, 45218148 - 45218217
Alignment:
Q  268 agagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    ||||||||||||   |||||| |||||| |||| |||||||| ||| |||||||||||||||| ||||||    
T  45218148 agagagaaaaatagttttgagtgcctttttcaagtattggtgcattcttctttatcataaatgtaaagta 45218217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 339
Target Start/End: Complemental strand, 21446581 - 21446482
Alignment:
Q  242 ttattaagaaaaattgtataaatgaaaga--gagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagtata 339  Q
    ||||||||||||||||||||| |||||||  ||||||||| | |||||| | | |||| || |||| ||| ||| || ||||||||||||  ||||||||    
T  21446581 ttattaagaaaaattgtataagtgaaagagagagaaaaataattttgagtgtccttattaattattagtgcattcttttttatcataaatataaagtata 21446482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 283 - 339
Target Start/End: Original strand, 27337878 - 27337934
Alignment:
Q  283 tttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagtata 339  Q
    |||||| | |||| |||| |||||||| |||||||||||||||||||| ||||||||    
T  27337878 tttgagtgtctttgtcaagtattggtgcattattctttatcataaatgtaaagtata 27337934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 452 - 488
Target Start/End: Complemental strand, 37264297 - 37264261
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaattttt 488  Q
    |||||||||||||||||||||||||| ||||||||||    
T  37264297 ttaatattgtattgaaaagtgaaatgggtcaattttt 37264261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 356 - 403
Target Start/End: Complemental strand, 32972070 - 32972023
Alignment:
Q  356 catttatgataaagaagaatacaccaatagttgataagggcgctcaaa 403  Q
    ||||||||| ||| |||||| |||||||||||||||||||| ||||||    
T  32972070 catttatgacaaaaaagaatgcaccaatagttgataagggcactcaaa 32972023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 329
Target Start/End: Complemental strand, 6838200 - 6838118
Alignment:
Q  247 aagaaaaattgtataaatgaaagagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaat 329  Q
    |||||||| ||||||| ||||||||||||||||| || ||||  | |||  |||  ||||||| ||| |||||||||||||||    
T  6838200 aagaaaaaatgtataagtgaaagagagaaaaatgggtatgagtacttttgccaaggattggtgcattcttctttatcataaat 6838118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 337
Target Start/End: Complemental strand, 24288557 - 24288471
Alignment:
Q  251 aaaattgtataaatgaaagagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    |||| ||||||||  ||||||||| ||||   |||||| |||||| |||| |||| ||| ||| |||||||||||||||| ||||||    
T  24288557 aaaagtgtataaagtaaagagagataaatagttttgagtgcctttttcaagtatttgtgcattcttctttatcataaatgtaaagta 24288471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 458 - 499
Target Start/End: Original strand, 3668006 - 3668047
Alignment:
Q  458 ttgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    |||||||||||||||||||| |||||||||| | ||||||||    
T  3668006 ttgtattgaaaagtgaaatgggtcaatttttttaggacaata 3668047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 452 - 485
Target Start/End: Original strand, 6591664 - 6591697
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatt 485  Q
    ||||||||||||| ||||||||||||||||||||    
T  6591664 ttaatattgtatttaaaagtgaaatgagtcaatt 6591697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 455 - 488
Target Start/End: Complemental strand, 27621815 - 27621782
Alignment:
Q  455 atattgtattgaaaagtgaaatgagtcaattttt 488  Q
    |||||||||||||||||||||||| |||||||||    
T  27621815 atattgtattgaaaagtgaaatgaatcaattttt 27621782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 327
Target Start/End: Complemental strand, 27621995 - 27621895
Alignment:
Q  229 actcatttcgcatttattaagaaaaattgtataaatgaaagag--agaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcata 326  Q
    ||||||||| || ||||||||||||| |||||||   ||||||  |||||||||| ||||||  || ||||||| |||||||| |||  || ||||||||    
T  27621995 actcatttcacacttattaagaaaaaatgtataatgaaaagagaaagaaaaatgattttgagtacccttatcaattattggtgcattcctccttatcata 27621896  T
Q  327 a 327  Q
    |    
T  27621895 a 27621895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 1e-19; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 211 - 337
Target Start/End: Complemental strand, 15325323 - 15325195
Alignment:
Q  211 catttaaactgagc-cttgactcatttcgcatttattaagaaaaattgtataaatgaaagagagaaaaa--tgagtttgagcgcctttatcaactattgg 307  Q
    ||||| |||||||| ||||||||||||| || ||||||||||||| ||||||| ||||||||||| |||  ||  |||||  ||||| ||||||||||||    
T  15325323 cattttaactgagctcttgactcatttcacaattattaagaaaaagtgtataagtgaaagagagagaaaattggttttgaatgcctt-atcaactattgg 15325225  T
Q  308 tgtattattctttatcataaatgcaaagta 337  Q
    ||| || ||||||||| |||||||||||||    
T  15325224 tgtgttcttctttatcgtaaatgcaaagta 15325195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 211 - 337
Target Start/End: Original strand, 15371794 - 15371922
Alignment:
Q  211 catttaaactgagcc-ttgactcatttcgcatttattaagaaaaattgtataaatgaaag--agagaaaaatgagtttgagcgcctttatcaactattgg 307  Q
    ||||| ||||||||| |||  ||||||| || ||||||||||||| ||||||| ||||||  |||||||||||  |||||| | ||| |||||||||| |    
T  15371794 cattttaactgagcccttggttcatttcacaattattaagaaaaagtgtataagtgaaagcgagagaaaaatggttttgagtgtctt-atcaactattag 15371892  T
Q  308 tgtattattctttatcataaatgcaaagta 337  Q
    || ||| |||||||||||||||||||||||    
T  15371893 tgcattcttctttatcataaatgcaaagta 15371922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 250 - 336
Target Start/End: Original strand, 3874020 - 3874108
Alignment:
Q  250 aaaaattgtataaatgaaagagagaaaaa--tgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagt 336  Q
    ||||| |||||||||||||||||||||||  ||| |||||| | |||| |||| |||||||| |||||||||||||||||||| |||||    
T  3874020 aaaaagtgtataaatgaaagagagaaaaaaatgattttgagtgtctttgtcaagtattggtgcattattctttatcataaatgtaaagt 3874108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 224 - 333
Target Start/End: Original strand, 15351328 - 15351438
Alignment:
Q  224 ccttgactcatttcgcatttattaagaaaaattgtataaatgaa--agagagaaaaatgagtttgagcgcctttatcaactattggtgtattattcttta 321  Q
    |||||||||||||| || ||||||||||||| ||||||| ||||  |||||||||| ||| ||| || ||| ||||||||||||| ||  || |||||||    
T  15351328 ccttgactcatttcacaattattaagaaaaaatgtataagtgaatgagagagaaaattgatttttagtgcc-ttatcaactattgatgcgttcttcttta 15351426  T
Q  322 tcataaatgcaa 333  Q
    ||||||||||||    
T  15351427 tcataaatgcaa 15351438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 452 - 499
Target Start/End: Complemental strand, 4552886 - 4552839
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||    
T  4552886 ttaatattgtattgaaaagtgaaatgagtcaatttttctgagacaata 4552839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 337
Target Start/End: Complemental strand, 15355719 - 15355623
Alignment:
Q  242 ttattaagaaaaattgtataaatgaaa--gagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    ||||||||||||| ||||||| |||||  ||||||||| ||  |||||| | ||| |||||||||||||| ||| ||||||||||||||| |||||||    
T  15355719 ttattaagaaaaagtgtataagtgaaaaagagagaaaattggttttgagtgtctt-atcaactattggtgcattcttctttatcataaatccaaagta 15355623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 334
Target Start/End: Original strand, 34803655 - 34803763
Alignment:
Q  230 ctcatttcgcatttattaagaaaaattgtataaatgaaagagaga--aaaatgagtttgagcgcctttatcaactattggtgtattattctt--tatcat 325  Q
    |||||||| || ||||||||||||| |||||||| ||||||||||  ||||||  |||||| | ||||||||||||||| || |||  ||||  ||||||    
T  34803655 ctcatttcacacttattaagaaaaagtgtataaaggaaagagagaggaaaatggttttgagtgtctttatcaactattgatgcattcctctttatatcat 34803754  T
Q  326 aaatgcaaa 334  Q
    |||||||||    
T  34803755 aaatgcaaa 34803763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 250 - 337
Target Start/End: Original strand, 3166078 - 3166167
Alignment:
Q  250 aaaaattgtataaatgaaagag--agaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    ||||| ||||||||||||||||  ||||||||   |||||| | ||||| ||| ||||| |||||| |||||||||||||||| ||||||    
T  3166078 aaaaagtgtataaatgaaagagagagaaaaatagttttgagtgtctttaacaagtattgatgtatttttctttatcataaatgtaaagta 3166167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 357 - 393
Target Start/End: Original strand, 15355631 - 15355667
Alignment:
Q  357 atttatgataaagaagaatacaccaatagttgataag 393  Q
    ||||||||||||||||||| |||||||||||||||||    
T  15355631 atttatgataaagaagaatgcaccaatagttgataag 15355667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 327
Target Start/End: Original strand, 178949 - 179031
Alignment:
Q  244 attaagaaaaattgtataaatgaaagagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataa 327  Q
    |||||||||||| |||||||| |||||||||||||||| ||| ||   |||| |||| ||||  |||||| |||||||||||||    
T  178949 attaagaaaaat-gtataaataaaagagagaaaaatgattttaagtttctttgtcaaatattaatgtattcttctttatcataa 179031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 452 - 499
Target Start/End: Original strand, 33921592 - 33921639
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttctcggacaata 499  Q
    |||||||||| ||| ||||||||||| |||||||||||| ||||||||    
T  33921592 ttaatattgttttggaaagtgaaatgggtcaatttttctgggacaata 33921639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 452 - 490
Target Start/End: Original strand, 2310411 - 2310449
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaatttttct 490  Q
    |||||||||||||||||||||||||  ||||||||||||    
T  2310411 ttaatattgtattgaaaagtgaaattggtcaatttttct 2310449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 394
Target Start/End: Original strand, 15325202 - 15325240
Alignment:
Q  356 catttatgataaagaagaatacaccaatagttgataagg 394  Q
    |||||| |||||||||||| |||||||||||||||||||    
T  15325202 catttacgataaagaagaacacaccaatagttgataagg 15325240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 356 - 393
Target Start/End: Complemental strand, 15371915 - 15371878
Alignment:
Q  356 catttatgataaagaagaatacaccaatagttgataag 393  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  15371915 catttatgataaagaagaatgcactaatagttgataag 15371878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 337
Target Start/End: Original strand, 10740 - 10850
Alignment:
Q  230 ctcatttcgcatttattaagaaaaat-tgtataaatgaaagag--agaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcata 326  Q
    |||||||| || |||||||||||||  ||| ||| ||||||||  ||||||||| ||||||| | | |||||||||||||||  ||| ||||||||||||    
T  10740 ctcatttcacagttattaagaaaaaaatgtgtaagtgaaagagagagaaaaatgggtttgagtgtccttatcaactattggttcattcttctttatcata 10839  T
Q  327 aatgcaaagta 337  Q
    |||||||||||    
T  10840 aatgcaaagta 10850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221; HSP #2
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 356 - 403
Target Start/End: Complemental strand, 10843 - 10796
Alignment:
Q  356 catttatgataaagaagaatacaccaatagttgataagggcgctcaaa 403  Q
    ||||||||||||||||||||  ||||||||||||||||| | ||||||    
T  10843 catttatgataaagaagaatgaaccaatagttgataaggacactcaaa 10796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 39; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 337
Target Start/End: Complemental strand, 709 - 613
Alignment:
Q  242 ttattaagaaaaattgtataaatgaaa--gagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    ||||||||||||| ||||||| |||||  ||||||||| ||  |||||| | ||| |||||||||||||| ||| ||||||||||||||| |||||||    
T  709 ttattaagaaaaagtgtataagtgaaaaagagagaaaattggttttgagtgtctt-atcaactattggtgcattcttctttatcataaatccaaagta 613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576; HSP #2
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 357 - 393
Target Start/End: Original strand, 621 - 657
Alignment:
Q  357 atttatgataaagaagaatacaccaatagttgataag 393  Q
    ||||||||||||||||||| |||||||||||||||||    
T  621 atttatgataaagaagaatgcaccaatagttgataag 657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 337
Target Start/End: Complemental strand, 5952 - 5866
Alignment:
Q  251 aaaattgtataaatgaaagagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    |||| ||||||||| ||||||||||||||||  ||||| | ||||||||| ||||| || |||  ||||||||||||||| ||||||    
T  5952 aaaagtgtataaataaaagagagaaaaatgatcttgagtgtctttatcaagtattgatgcattgctctttatcataaatgtaaagta 5866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 337
Target Start/End: Original strand, 352434 - 352520
Alignment:
Q  251 aaaattgtataaatgaaagagagaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataaatgcaaagta 337  Q
    |||| ||||||||| |||||||||||||| | |||||| | |||| | || |||||||| ||| |||||||||||||||| ||||||    
T  352434 aaaagtgtataaataaaagagagaaaaataattttgagtgtctttgttaagtattggtgcattcttctttatcataaatgtaaagta 352520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 452 - 488
Target Start/End: Complemental strand, 158011 - 157975
Alignment:
Q  452 ttaatattgtattgaaaagtgaaatgagtcaattttt 488  Q
    |||||||||||||||||||||||||| ||||||||||    
T  158011 ttaatattgtattgaaaagtgaaatgggtcaattttt 157975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 337
Target Start/End: Original strand, 12386 - 12495
Alignment:
Q  230 ctcatttcgcatttattaagaaaaattgtataaatgaaagaga--gaaaaatgagtttgagcgcctttatcaactattggtgtattattctttatcataa 327  Q
    |||||||| ||  ||||||||||||  ||||||||||||||||  ||| ||||  |||||| | |||| |||| |||| ||| ||| |||||||| ||||    
T  12386 ctcatttcacacgtattaagaaaaaacgtataaatgaaagagagtgaataatggttttgagtgtctttgtcaagtattagtgcattcttctttattataa 12485  T
Q  328 atgcaaagta 337  Q
    ||| ||||||    
T  12486 atgtaaagta 12495  T

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