View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0054_low_5 (Length: 230)

Name: NF0054_low_5
Description: NF0054
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0054_low_5
NF0054_low_5
[»] chr4 (34 HSPs)
chr4 (23-226)||(44102392-44102595)
chr4 (23-230)||(44928655-44928862)
chr4 (23-219)||(21815374-21815569)
chr4 (35-197)||(52242958-52243120)
chr4 (23-100)||(15371384-15371461)
chr4 (23-100)||(15373665-15373742)
chr4 (21-100)||(16223712-16223791)
chr4 (23-96)||(22354015-22354088)
chr4 (23-94)||(15367872-15367943)
chr4 (23-94)||(15370199-15370270)
chr4 (23-94)||(15402885-15402956)
chr4 (23-175)||(15464716-15464869)
chr4 (151-218)||(7089186-7089254)
chr4 (23-123)||(13812649-13812749)
chr4 (151-230)||(15091206-15091286)
chr4 (151-218)||(17047816-17047884)
chr4 (151-229)||(14038958-14039037)
chr4 (151-230)||(16377254-16377333)
chr4 (151-228)||(44053138-44053216)
chr4 (23-120)||(20157133-20157230)
chr4 (151-218)||(3096952-3097020)
chr4 (151-230)||(7799006-7799086)
chr4 (91-219)||(21815045-21815173)
chr4 (91-219)||(21818467-21818595)
chr4 (38-120)||(24028937-24029019)
chr4 (156-220)||(3332201-3332265)
chr4 (156-220)||(24029057-24029121)
chr4 (23-95)||(3332066-3332138)
chr4 (151-230)||(22636743-22636823)
chr4 (151-217)||(7894010-7894077)
chr4 (156-220)||(13812550-13812614)
chr4 (39-96)||(22634080-22634137)
chr4 (151-218)||(12903066-12903134)
chr4 (151-207)||(14053058-14053114)
[»] chr8 (17 HSPs)
chr8 (23-230)||(41598366-41598573)
chr8 (24-137)||(19801252-19801365)
chr8 (23-135)||(13507911-13508023)
chr8 (23-135)||(13597443-13597555)
chr8 (151-230)||(22875375-22875454)
chr8 (23-100)||(17611974-17612051)
chr8 (84-229)||(22626978-22627123)
chr8 (151-230)||(18878969-18879049)
chr8 (151-230)||(20536517-20536597)
chr8 (151-230)||(23406690-23406770)
chr8 (151-230)||(18818142-18818221)
chr8 (149-217)||(21918745-21918814)
chr8 (151-230)||(6759566-6759646)
chr8 (35-137)||(40492677-40492779)
chr8 (151-218)||(25362884-25362952)
chr8 (151-220)||(16199389-16199458)
chr8 (84-132)||(28648874-28648922)
[»] chr5 (24 HSPs)
chr5 (23-226)||(36154564-36154767)
chr5 (23-226)||(11580981-11581184)
chr5 (38-197)||(22144247-22144406)
chr5 (84-230)||(13095737-13095883)
chr5 (151-218)||(8286586-8286654)
chr5 (151-230)||(21985879-21985958)
chr5 (151-230)||(23390228-23390308)
chr5 (151-230)||(24529530-24529610)
chr5 (23-123)||(24767177-24767277)
chr5 (151-230)||(1096777-1096856)
chr5 (84-230)||(25421775-25421921)
chr5 (23-96)||(31061247-31061320)
chr5 (156-220)||(22119934-22119998)
chr5 (151-230)||(9078262-9078341)
chr5 (84-230)||(13025553-13025699)
chr5 (24-96)||(21871438-21871510)
chr5 (24-96)||(21875718-21875790)
chr5 (151-207)||(22107129-22107185)
chr5 (39-120)||(22120036-22120119)
chr5 (151-201)||(21292732-21292782)
chr5 (151-201)||(22075328-22075378)
chr5 (156-220)||(24767078-24767142)
chr5 (82-230)||(25431635-25431783)
chr5 (23-60)||(40726036-40726073)
[»] scaffold0142 (2 HSPs)
scaffold0142 (23-226)||(16962-17165)
scaffold0142 (156-220)||(7512-7576)
[»] chr3 (33 HSPs)
chr3 (23-230)||(17248018-17248225)
chr3 (23-219)||(53070441-53070637)
chr3 (23-137)||(23274870-23274984)
chr3 (23-110)||(17672804-17672891)
chr3 (23-100)||(24340584-24340661)
chr3 (77-230)||(25476117-25476270)
chr3 (23-137)||(2051024-2051138)
chr3 (84-230)||(40213453-40213599)
chr3 (35-137)||(52523552-52523654)
chr3 (84-220)||(14572831-14572968)
chr3 (151-230)||(13442583-13442663)
chr3 (151-230)||(26687196-26687276)
chr3 (149-230)||(17488164-17488246)
chr3 (23-80)||(12119651-12119708)
chr3 (84-220)||(14576574-14576711)
chr3 (23-120)||(14665786-14665883)
chr3 (23-120)||(14668941-14669038)
chr3 (23-120)||(14735299-14735396)
chr3 (151-230)||(18438844-18438923)
chr3 (151-218)||(20698180-20698248)
chr3 (84-197)||(42386654-42386767)
chr3 (155-230)||(12934042-12934117)
chr3 (151-230)||(43841241-43841321)
chr3 (149-230)||(11424495-11424576)
chr3 (149-230)||(17499646-17499728)
chr3 (156-220)||(12340068-12340132)
chr3 (156-220)||(14665921-14665985)
chr3 (156-220)||(14669076-14669140)
chr3 (156-220)||(14735434-14735498)
chr3 (151-228)||(14973164-14973241)
chr3 (23-60)||(22147427-22147464)
chr3 (23-60)||(37642166-37642203)
chr3 (155-230)||(49667815-49667890)
[»] chr1 (11 HSPs)
chr1 (23-230)||(433189-433396)
chr1 (35-195)||(16758845-16759005)
chr1 (23-137)||(21342275-21342389)
chr1 (23-137)||(21347140-21347254)
chr1 (23-100)||(21473126-21473203)
chr1 (23-100)||(21477699-21477776)
chr1 (85-230)||(50209945-50210090)
chr1 (151-230)||(34510090-34510169)
chr1 (77-230)||(22532505-22532658)
chr1 (151-226)||(22354308-22354384)
chr1 (149-207)||(38801147-38801205)
[»] scaffold0413 (1 HSPs)
scaffold0413 (23-226)||(15351-15554)
[»] chr7 (23 HSPs)
chr7 (23-226)||(17061696-17061899)
chr7 (23-230)||(44116687-44116893)
chr7 (23-219)||(12756459-12756655)
chr7 (35-197)||(2279883-2280045)
chr7 (23-100)||(10063684-10063761)
chr7 (23-96)||(38898287-38898360)
chr7 (23-100)||(19486605-19486682)
chr7 (151-230)||(9509498-9509578)
chr7 (46-197)||(12255556-12255707)
chr7 (149-230)||(15143769-15143850)
chr7 (23-123)||(39267486-39267586)
chr7 (84-230)||(38227723-38227869)
chr7 (23-120)||(9751393-9751490)
chr7 (151-230)||(3564096-3564175)
chr7 (38-123)||(2832145-2832230)
chr7 (156-220)||(11995771-11995835)
chr7 (151-230)||(12699141-12699221)
chr7 (35-139)||(16091951-16092055)
chr7 (151-199)||(27847597-27847645)
chr7 (151-207)||(40443698-40443754)
chr7 (30-65)||(9177562-9177597)
chr7 (156-220)||(18302494-18302558)
chr7 (160-220)||(39267387-39267447)
[»] chr6 (19 HSPs)
chr6 (23-219)||(18456897-18457093)
chr6 (23-137)||(25644504-25644618)
chr6 (23-100)||(8227372-8227449)
chr6 (155-220)||(29808626-29808691)
chr6 (149-230)||(22779959-22780041)
chr6 (149-230)||(20594081-20594162)
chr6 (151-230)||(29060850-29060929)
chr6 (155-220)||(28496214-28496280)
chr6 (151-218)||(18821563-18821631)
chr6 (151-218)||(20360704-20360772)
chr6 (151-220)||(19303282-19303352)
chr6 (156-208)||(15894185-15894237)
chr6 (23-119)||(27325278-27325374)
chr6 (151-201)||(16920395-16920445)
chr6 (85-230)||(18409559-18409704)
chr6 (156-220)||(21939699-21939763)
chr6 (151-230)||(17287528-17287608)
chr6 (151-218)||(20638027-20638095)
chr6 (151-207)||(22831811-22831867)
[»] scaffold0031 (1 HSPs)
scaffold0031 (23-219)||(20168-20364)
[»] scaffold0056 (2 HSPs)
scaffold0056 (23-175)||(79116-79268)
scaffold0056 (84-230)||(16947-17093)
[»] scaffold0839 (1 HSPs)
scaffold0839 (92-230)||(1809-1947)
[»] scaffold0503 (1 HSPs)
scaffold0503 (23-219)||(12111-12307)
[»] scaffold0012 (1 HSPs)
scaffold0012 (23-165)||(225589-225731)
[»] chr2 (14 HSPs)
chr2 (23-136)||(19672010-19672122)
chr2 (35-197)||(23708383-23708545)
chr2 (84-230)||(23660265-23660411)
chr2 (151-230)||(32451661-32451741)
chr2 (149-229)||(22737913-22737994)
chr2 (151-230)||(27753884-27753964)
chr2 (151-230)||(298547-298626)
chr2 (155-230)||(23076755-23076829)
chr2 (155-230)||(22730965-22731041)
chr2 (35-65)||(23004944-23004974)
chr2 (149-199)||(23286168-23286218)
chr2 (151-207)||(20309414-20309470)
chr2 (104-175)||(20519978-20520050)
chr2 (84-132)||(22337358-22337406)
[»] scaffold0247 (2 HSPs)
scaffold0247 (23-100)||(17888-17965)
scaffold0247 (23-96)||(2039-2112)
[»] scaffold0228 (3 HSPs)
scaffold0228 (151-220)||(4817-4886)
scaffold0228 (151-220)||(12399-12468)
scaffold0228 (151-220)||(22351-22420)
[»] scaffold0021 (1 HSPs)
scaffold0021 (151-230)||(124894-124974)
[»] scaffold0011 (2 HSPs)
scaffold0011 (151-230)||(52221-52301)
scaffold0011 (151-220)||(167721-167791)
[»] scaffold0003 (1 HSPs)
scaffold0003 (151-230)||(339683-339762)
[»] scaffold0175 (2 HSPs)
scaffold0175 (151-228)||(13401-13479)
scaffold0175 (157-220)||(34437-34500)
[»] scaffold0141 (1 HSPs)
scaffold0141 (151-229)||(39786-39864)
[»] scaffold0049 (1 HSPs)
scaffold0049 (151-229)||(74948-75026)
[»] scaffold0122 (2 HSPs)
scaffold0122 (151-228)||(25799-25876)
scaffold0122 (151-230)||(33226-33306)
[»] scaffold0007 (2 HSPs)
scaffold0007 (23-82)||(164515-164574)
scaffold0007 (23-82)||(161014-161073)
[»] scaffold0305 (1 HSPs)
scaffold0305 (149-230)||(20710-20792)
[»] scaffold0080 (1 HSPs)
scaffold0080 (84-226)||(40155-40297)
[»] scaffold0001 (1 HSPs)
scaffold0001 (23-96)||(85490-85563)
[»] scaffold0292 (2 HSPs)
scaffold0292 (151-230)||(3779-3859)
scaffold0292 (151-229)||(652-730)
[»] scaffold0217 (1 HSPs)
scaffold0217 (151-230)||(16331-16411)
[»] scaffold0166 (2 HSPs)
scaffold0166 (23-123)||(9674-9774)
scaffold0166 (156-220)||(9575-9639)
[»] scaffold0042 (1 HSPs)
scaffold0042 (149-224)||(24039-24115)
[»] scaffold0016 (3 HSPs)
scaffold0016 (151-230)||(2160-2240)
scaffold0016 (156-220)||(207260-207324)
scaffold0016 (23-120)||(207362-207459)
[»] scaffold0357 (2 HSPs)
scaffold0357 (35-137)||(13324-13426)
scaffold0357 (35-137)||(15924-16026)
[»] scaffold0010 (1 HSPs)
scaffold0010 (35-196)||(60479-60641)
[»] scaffold0540 (1 HSPs)
scaffold0540 (151-228)||(747-824)
[»] scaffold0026 (2 HSPs)
scaffold0026 (149-230)||(40164-40245)
scaffold0026 (191-230)||(26575-26614)
[»] scaffold0761 (1 HSPs)
scaffold0761 (23-79)||(4475-4531)
[»] scaffold0165 (2 HSPs)
scaffold0165 (151-218)||(3790-3858)
scaffold0165 (151-218)||(7854-7922)
[»] scaffold0145 (1 HSPs)
scaffold0145 (151-218)||(39070-39137)
[»] scaffold1842 (1 HSPs)
scaffold1842 (151-220)||(791-861)
[»] scaffold0193 (1 HSPs)
scaffold0193 (149-218)||(13518-13588)
[»] scaffold0358 (2 HSPs)
scaffold0358 (151-207)||(245-301)
scaffold0358 (151-207)||(5021-5077)
[»] scaffold0130 (1 HSPs)
scaffold0130 (151-230)||(28140-28219)
[»] scaffold0121 (1 HSPs)
scaffold0121 (151-230)||(8264-8344)
[»] scaffold0034 (1 HSPs)
scaffold0034 (151-230)||(51616-51696)
[»] scaffold1984 (1 HSPs)
scaffold1984 (151-230)||(440-519)
[»] scaffold0639 (1 HSPs)
scaffold0639 (151-229)||(8784-8863)
[»] scaffold0490 (1 HSPs)
scaffold0490 (149-200)||(2259-2310)
[»] scaffold1137 (1 HSPs)
scaffold1137 (155-197)||(2066-2108)
[»] scaffold0221 (2 HSPs)
scaffold0221 (159-220)||(12550-12611)
scaffold0221 (23-96)||(12675-12748)
[»] scaffold0120 (1 HSPs)
scaffold0120 (74-132)||(16320-16378)
[»] scaffold0461 (1 HSPs)
scaffold0461 (35-68)||(11659-11692)
[»] scaffold0395 (1 HSPs)
scaffold0395 (149-219)||(704-776)
[»] scaffold0347 (1 HSPs)
scaffold0347 (156-220)||(344-408)
[»] scaffold0309 (1 HSPs)
scaffold0309 (151-200)||(6919-6968)
[»] scaffold0192 (1 HSPs)
scaffold0192 (156-220)||(10226-10290)
[»] scaffold0124 (1 HSPs)
scaffold0124 (156-220)||(24392-24456)
[»] scaffold0037 (2 HSPs)
scaffold0037 (156-220)||(80073-80137)
scaffold0037 (23-96)||(80199-80272)
[»] scaffold0456 (1 HSPs)
scaffold0456 (151-207)||(10182-10238)
[»] scaffold0123 (1 HSPs)
scaffold0123 (35-123)||(25300-25388)
[»] scaffold0113 (1 HSPs)
scaffold0113 (151-207)||(32373-32429)
[»] scaffold0028 (1 HSPs)
scaffold0028 (155-230)||(132967-133042)


Alignment Details
Target: chr4 (Bit Score: 148; Significance: 3e-78; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 23 - 226
Target Start/End: Original strand, 44102392 - 44102595
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 122  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |    
T  44102392 atcatcataaatcagcttcacagatcatcattaatattatatataatattcataactatcccaaggttcaactctcaacgactcgtgctacaaagatcgc 44102491  T
Q  123 aaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctaca 222  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||| ||||| | |||||||| |||||||||||||||| |||||||| |||||| |    
T  44102492 aaaatcctaaacaagtattctgtaaataggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattctcaaagttttattctaaa 44102591  T
Q  223 atct 226  Q
    ||||    
T  44102592 atct 44102595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 23 - 230
Target Start/End: Complemental strand, 44928862 - 44928655
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 122  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| ||||||||| |    
T  44928862 atcatcataaatcagcttcacagatcatcattaatattatatataatattcataactaccacaaggttcaactctcaacgactcgtgcgacaaagatcgc 44928763  T
Q  123 aaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctaca 222  Q
    ||||||||||||||| | ||| ||| | |||||||||||||||||||| ||||| | |||||||| ||||| |||||||||||||||||||||||||| |    
T  44928762 aaaatcctaaacaagcattctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgagttctggtcagattcccaaagtttcattctaaa 44928663  T
Q  223 atctttcc 230  Q
    ||||||||    
T  44928662 atctttcc 44928655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 23 - 219
Target Start/End: Complemental strand, 21815569 - 21815374
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 122  Q
    |||| |||||| ||||||||||||||||||||||||||||||| | |||||||||||| | ||||||||||||||||| ||||||||| |  |||||| |    
T  21815569 atcaccataaatcagcttcacatatcatcattaatattatatacagtattcataacta-cccaaggttcaactctcaacgactcgtgcgatgaagatcgc 21815471  T
Q  123 aaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattct 219  Q
    |||||||||||||||   ||| ||| | ||  |||||||||||||||| ||||  | |||||||| |||||||||||| |||| |||  ||||||||    
T  21815470 aaaatcctaaacaaggcttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagttcaggtcagcttccaaaaagttcattct 21815374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 35 - 197
Target Start/End: Complemental strand, 52243120 - 52242958
Alignment:
Q  35 cagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaac 134  Q
    |||||||||| ||||||||||||||  |||| ||| ||||| |||| | ||| ||||||||||  | ||||||||| ||||||||| |||||||||||||    
T  52243120 cagcttcacagatcatcattaatatcttatacaatcttcattactaccccaaagttcaactctttacgactcgtgcgacaaagatcgcaaaatcctaaac 52243021  T
Q  135 aagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggt 197  Q
    ||| | ||| ||| | ||  |||||||||||||||| ||||  | || ||||| |||||||||    
T  52243020 aagcattctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgagttcaggt 52242958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 100
Target Start/End: Original strand, 15371384 - 15371461
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaa 100  Q
    ||||||||||| |||||||||| ||||||||||||||| || |||||||||||||||| | |||||||||||||||||    
T  15371384 atcatcataaatcagcttcacagatcatcattaatattgtaaataatattcataactaccccaaggttcaactctcaa 15371461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 100
Target Start/End: Original strand, 15373665 - 15373742
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaa 100  Q
    ||||||||||| |||||||||| ||||||||||||||| || |||||||||||||||| | |||||||||||||||||    
T  15373665 atcatcataaatcagcttcacagatcatcattaatattgtaaataatattcataactaccccaaggttcaactctcaa 15373742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 16223712 - 16223791
Alignment:
Q  21 acatcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaa 100  Q
    ||||||||||||| |||||||||| ||||||||||||||  || |||||||||||||||| | |||||||||||||||||    
T  16223712 acatcatcataaatcagcttcacagatcatcattaatatcgtaaataatattcataactaccccaaggttcaactctcaa 16223791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 23 - 96
Target Start/End: Original strand, 22354015 - 22354088
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactc 96  Q
    ||||||||||| ||| |||||| |||||||||||||||||||||||||||| |||||| | |||||||||||||    
T  22354015 atcatcataaatcagtttcacagatcatcattaatattatatataatattcgtaactaccccaaggttcaactc 22354088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 15367872 - 15367943
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaac 94  Q
    ||||||||||| |||||||||| ||||||||||||||| || |||||||||||||||| | |||||||||||    
T  15367872 atcatcataaatcagcttcacagatcatcattaatattgtaaataatattcataactaccccaaggttcaac 15367943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 15370199 - 15370270
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaac 94  Q
    ||||||||||| |||||||||| ||||||||||||||| || |||||||||||||||| | |||||||||||    
T  15370199 atcatcataaatcagcttcacagatcatcattaatattgtaaataatattcataactaccccaaggttcaac 15370270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 15402885 - 15402956
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaac 94  Q
    ||||||||||| |||||||||| ||||||||||||||| || |||||||||||||||| | |||||||||||    
T  15402885 atcatcataaatcagcttcacagatcatcattaatattgtaaataatattcataactaccccaaggttcaac 15402956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 175
Target Start/End: Complemental strand, 15464869 - 15464716
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 122  Q
    ||||||||| | |||||||||| |||||||||||||| ||||| |||  |||| ||||   |||||||||||||  ||  ||| |||| ||||||||  |    
T  15464869 atcatcatatatcagcttcacaaatcatcattaatatcatatacaattctcattactactccaaggttcaactcataacaacttgtgcgacaaagattgc 15464770  T
Q  123 aaaatcctaaacaagt-aatctttaaataggtcactcgcgaggcgagagactct 175  Q
    |||||||||||||||| | ||| ||| | ||  |||||||||||||||| ||||    
T  15464769 aaaatcctaaacaagtcattctgtaactgggcaactcgcgaggcgagagcctct 15464716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 7089186 - 7089254
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattc 218  Q
    |||||||||||||||||||| ||||| | |||||||| ||||||||||||| ||||| |||||||||||    
T  7089186 ggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatcccataagtttcattc 7089254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 13812749 - 13812649
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 122  Q
    ||||||||| | || ||||||| |||||||||||||| ||||||| |  |||| |||||| |||||||||||||  ||  |||||||| |||||||||||    
T  13812749 atcatcatataacaacttcacagatcatcattaatatcatatatattcctcattactatcccaaggttcaactcataacaactcgtgcgacaaagatcac 13812650  T
Q  123 a 123  Q
    |    
T  13812649 a 13812649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 15091206 - 15091286
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcaga-ttcccaaagtttcattctacaatctttcc 230  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||| |||| |||||||||||||| |||| ||||    
T  15091206 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagtttcattctaaaatccttcc 15091286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 17047884 - 17047816
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattc 218  Q
    |||||||||||||||||||| ||||| | |||||||| ||||||||||||| ||||| |||||||||||    
T  17047884 ggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttcattc 17047816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 151 - 229
Target Start/End: Original strand, 14038958 - 14039037
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcaga-ttcccaaagtttcattctacaatctttc 229  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||| ||||||| |||| |||||||||||||| ||||||||    
T  14038958 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttctggtcagatttccaaaagtttcattctaaaatctttc 14039037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 16377333 - 16377254
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttcc 230  Q
    ||||||||| |||||||||| ||||| | ||| |||| |||||||||||||||||||||  |||||||||| ||| ||||    
T  16377333 ggtcactcgtgaggcgagagcctctgctcgccgtggcgagttcaggtcagattcccaaaagttcattctacgatcattcc 16377254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 228
Target Start/End: Original strand, 44053138 - 44053216
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatcttt 228  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||| ||||| ||||||||| ||| |||||||    
T  44053138 ggtcactcgcgaggcgagagtctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcatcctataatcttt 44053216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 20157230 - 20157133
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatc 120  Q
    ||||||||| | || ||||||| |||||||||||||| ||||||| |  |||| |||||| |||||||||||||  ||  |||||||| |||||||||    
T  20157230 atcatcatataacaacttcacagatcatcattaatatcatatatattcctcattactatcccaaggttcaactcataacaactcgtgcgacaaagatc 20157133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 3096952 - 3097020
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattc 218  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||| ||||| |||||||||||    
T  3096952 ggtcactcgcgaggcgagagcctctgctcgccttggcgagttcaggtcagaatcccacaagtttcattc 3097020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 7799006 - 7799086
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttcc 230  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||| | | | |||||||||||||||| ||||||    
T  7799006 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatactacaagtttcattctacaaactttcc 7799086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 219
Target Start/End: Complemental strand, 21815173 - 21815045
Alignment:
Q  91 caactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctag 190  Q
    |||||||||| ||||||||| |  |||||| ||||||||||||||||   ||| ||| | ||  |||||||||||||||| ||||  | |||||||| ||    
T  21815173 caactctcaacgactcgtgcgatgaagatcgcaaaatcctaaacaaggcttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgag 21815074  T
Q  191 ttcaggtcagattcccaaagtttcattct 219  Q
    |||| ||||| |||| |||  ||||||||    
T  21815073 ttcaagtcagcttccaaaaagttcattct 21815045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 219
Target Start/End: Complemental strand, 21818595 - 21818467
Alignment:
Q  91 caactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctag 190  Q
    |||||||||| ||||||||| |  |||||| ||||||||||||||||   ||| ||| | ||  |||||||||||||||| ||||  | |||||||| ||    
T  21818595 caactctcaacgactcgtgcgatgaagatcgcaaaatcctaaacaaggcttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgag 21818496  T
Q  191 ttcaggtcagattcccaaagtttcattct 219  Q
    |||| ||||| |||| |||  ||||||||    
T  21818495 ttcaagtcagcttccaaaaagttcattct 21818467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 120
Target Start/End: Original strand, 24028937 - 24029019
Alignment:
Q  38 cttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatc 120  Q
    ||||||| |||||||||||||| ||||||| |  |||| |||||| |||||||||||||  ||  |||||||| |||||||||    
T  24028937 cttcacagatcatcattaatatcatatatattcctcattactatcccaaggttcaactcataacaactcgtgcgacaaagatc 24029019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 3332201 - 3332265
Alignment:
Q  156 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattcta 220  Q
    ||||||||||||||| ||||| | |||||||| |||||| ||||||||| ||||||||||||||||    
T  3332201 ctcgcgaggcgagagcctctgctcgccatggcgagttca-gtcagattctccaaagtttcattcta 3332265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 24029057 - 24029121
Alignment:
Q  156 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattcta 220  Q
    ||||||||||||||| ||||| | |||||||| |||||| ||||||||| ||||||||||||||||    
T  24029057 ctcgcgaggcgagagcctctgctcgccatggcgagttca-gtcagattctccaaagtttcattcta 24029121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 3332066 - 3332138
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaact 95  Q
    ||||||||| | || ||||||| |||||||||||||| ||||||| |  |||| |||||| ||||||||||||    
T  3332066 atcatcatataacaacttcacagatcatcattaatatcatatatattcctcattactatcccaaggttcaact 3332138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 22636743 - 22636823
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttcc 230  Q
    ||||||||| |||||||||| ||||| | ||| |||| || ||| |||||| ||||| ||||||||||||||||| |||||    
T  22636743 ggtcactcgtgaggcgagagcctctgctcgccgtggcgaggtcaagtcagaatcccacaagtttcattctacaatttttcc 22636823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 217
Target Start/End: Original strand, 7894010 - 7894077
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcatt 217  Q
    ||||||||| |||||||||| ||||| | ||| |||| ||||||||||||| ||||| ||||||||||    
T  7894010 ggtcactcgtgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcatt 7894077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 13812614 - 13812550
Alignment:
Q  156 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattcta 220  Q
    ||||||||||||||| ||||| | |||||||| |||| | ||||||||| ||||||||||||||||    
T  13812614 ctcgcgaggcgagagcctctgctcgccatggcgagttta-gtcagattctccaaagtttcattcta 13812550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 22634137 - 22634080
Alignment:
Q  39 ttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactc 96  Q
    |||||| |||||||||||||| ||||||| |  |||| |||||| |||||||||||||    
T  22634137 ttcacagatcatcattaatatcatatatattcctcattactatcccaaggttcaactc 22634080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 12903066 - 12903134
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattc 218  Q
    |||||||||||||||| ||| ||||  | ||| |||| ||||||||||||| ||||| |||||||||||    
T  12903066 ggtcactcgcgaggcgggagcctctactcgccgtggcgagttcaggtcagaatcccacaagtttcattc 12903134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 14053114 - 14053058
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca 207  Q
    |||||||||| ||||||||| ||||| | |||||||  ||||||||||||| |||||    
T  14053114 ggtcactcgcaaggcgagagcctctgctcgccatggtgagttcaggtcagaatccca 14053058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 136; Significance: 4e-71; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 23 - 230
Target Start/End: Original strand, 41598366 - 41598573
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 122  Q
    ||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||  |||||||| |    
T  41598366 atcatcataaatcagtttcacagatcatcattaatattatatataatattcataactaccccaaggttcaactctcaacgactcgtgcggcaaagatcgc 41598465  T
Q  123 aaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctaca 222  Q
    ||||||||||||||| | ||| ||| |||||||||||||||||||||| ||||| | |||||||| |||||||||||||||||||||||||||||||| |    
T  41598466 aaaatcctaaacaagcattctgtaactaggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaa 41598565  T
Q  223 atctttcc 230  Q
    ||||||||    
T  41598566 atctttcc 41598573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 137
Target Start/End: Complemental strand, 19801365 - 19801252
Alignment:
Q  24 tcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcaca 123  Q
    ||||| |||| |||||||||| |||||||||||| ||||||| |||||||||||||| | ||||||||||||||||| ||||||||| |||||||||  |    
T  19801365 tcatcgtaaatcagcttcacagatcatcattaatgttatatacaatattcataactaccccaaggttcaactctcaatgactcgtgcgacaaagatcgaa 19801266  T
Q  124 aaatcctaaacaag 137  Q
    ||||||||||||||    
T  19801265 aaatcctaaacaag 19801252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 23 - 135
Target Start/End: Complemental strand, 13508023 - 13507911
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 122  Q
    ||||||||||  ||| |||||| ||||||||||||||||||  ||||||||||||||||| || | ||||||||||||  |||||||| ||||||||| |    
T  13508023 atcatcataattcagtttcacagatcatcattaatattataattaatattcataactatcccacgattcaactctcaacaactcgtgcgacaaagatcgc 13507924  T
Q  123 aaaatcctaaaca 135  Q
    |||| ||||||||    
T  13507923 aaaaacctaaaca 13507911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 23 - 135
Target Start/End: Complemental strand, 13597555 - 13597443
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 122  Q
    ||||||||||  ||| |||||| ||||||||||||||||||  ||||||||||||||||| || | ||||||||||||  |||||||| ||||||||| |    
T  13597555 atcatcataattcagtttcacagatcatcattaatattataattaatattcataactatcccacgattcaactctcaacaactcgtgcgacaaagatcgc 13597456  T
Q  123 aaaatcctaaaca 135  Q
    |||| ||||||||    
T  13597455 aaaaacctaaaca 13597443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 22875375 - 22875454
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttcc 230  Q
    |||||||||||||||||||| ||||| | | |||||| |||||||||||||||||||||||||||||||| |||||||||    
T  22875375 ggtcactcgcgaggcgagagcctctgctcgtcatggcgagttcaggtcagattcccaaagtttcattctaaaatctttcc 22875454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 17612051 - 17611974
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaa 100  Q
    ||||||||||| |||||||||| ||||||||||||||| || |||||||||||||||| | |||||||||||||||||    
T  17612051 atcatcataaatcagcttcacagatcatcattaatattgtaaataatattcataactaccccaaggttcaactctcaa 17611974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 229
Target Start/End: Original strand, 22626978 - 22627123
Alignment:
Q  84 caaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaa-tctttaaataggtcactcgcgaggcgagagactctgtttgcc 182  Q
    |||||||||||||||||  |||||||| |||||| || ||||| ||||| ||||  | ||| |   ||| |||||||||||||||||| ||||| | |||    
T  22626978 caaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaa-caagacactctgtttctagatcactcgcgaggcgagagcctctgctcgcc 22627076  T
Q  183 atggctagttcaggtcagattcccaaagtttcattctacaatctttc 229  Q
     |||| ||||| ||||||||| |||||| ||||||||||||||||||    
T  22627077 gtggcaagttcgggtcagatttccaaaggttcattctacaatctttc 22627123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 18879049 - 18878969
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttcc 230  Q
    |||||||||||||||||||| ||||| | | | |||| ||||||||||||| ||||| |||||||||||||||||||||||    
T  18879049 ggtcactcgcgaggcgagagcctctgctcgtcttggcgagttcaggtcagaatcccacaagtttcattctacaatctttcc 18878969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 20536517 - 20536597
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttcc 230  Q
    |||||||||||||||||||| ||||  | ||| |||| ||||||||||||| ||||| |||||||||||||||||||||||    
T  20536517 ggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccataagtttcattctacaatctttcc 20536597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 23406690 - 23406770
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttcc 230  Q
    |||||||||||||||||||| ||||  | ||| |||| ||||||||||||| ||||| |||||||||||||||||||||||    
T  23406690 ggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttcc 23406770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 18818221 - 18818142
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttcc 230  Q
    |||||||||||||||||||| ||||| | ||| |||| |||||||||||||  || ||||||||||| ||||||||||||    
T  18818221 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaaaccaaaagtttcattttacaatctttcc 18818142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 21918814 - 21918745
Alignment:
Q  149 taggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcatt 217  Q
    |||||||||||||||||||||| ||||| | |||||||| ||||||||||||| ||||| ||||||||||    
T  21918814 taggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttcatt 21918745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 6759566 - 6759646
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcaga-ttcccaaagtttcattctacaatctttcc 230  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||| |||| |||||||||||||| ||| |||||    
T  6759566 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagtttcattctaaaatatttcc 6759646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 137
Target Start/End: Complemental strand, 40492779 - 40492677
Alignment:
Q  35 cagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaac 134  Q
    |||||||||| |||||||||||||||||||| ||  | |||  ||| | ||||| ||||||| |||   ||||||| ||||||||| |||||||||||||    
T  40492779 cagcttcacagatcatcattaatattatatacaacctccattcctaccacaaggatcaactcacaacatctcgtgcgacaaagatcgcaaaatcctaaac 40492680  T
Q  135 aag 137  Q
    |||    
T  40492679 aag 40492677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 25362952 - 25362884
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattc 218  Q
    |||||||| ||||||||||| ||||| | |||||||| ||||||||||||| ||||| |||||||||||    
T  25362952 ggtcactctcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttcattc 25362884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 16199458 - 16199389
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattcta 220  Q
    ||||||||||||||||||||  |||| | ||  |||| ||||||||||||| ||||| ||||| ||||||    
T  16199458 ggtcactcgcgaggcgagagcgtctgctcgctgtggcgagttcaggtcagaatcccacagtttaattcta 16199389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 28648922 - 28648874
Alignment:
Q  84 caaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaa 132  Q
    |||||||||||||||||  |||||||| |||||| || |||||||||||    
T  28648922 caaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaa 28648874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 132; Significance: 1e-68; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 23 - 226
Target Start/End: Complemental strand, 36154767 - 36154564
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 122  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||| ||||||||| ||||||||| |    
T  36154767 atcatcataaatcagcttcacatatcatcattaataatatatataatattcataactaccccaaggttcaactctcaacgactcgtgcgacaaagatcgc 36154668  T
Q  123 aaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctaca 222  Q
    ||||||||||||||| | ||| |||||||||||||||||||||||||| ||||  | |||||||| |||||||||||||||| |||||||| |||||| |    
T  36154667 aaaatcctaaacaagcattctgtaaataggtcactcgcgaggcgagagcctctactcgccatggcgagttcaggtcagattctcaaagttttattctaaa 36154568  T
Q  223 atct 226  Q
    ||||    
T  36154567 atct 36154564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 23 - 226
Target Start/End: Complemental strand, 11581184 - 11580981
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 122  Q
    ||||||||||| || ||||||| || |||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||| | ||||||||| |    
T  11581184 atcatcataaatcaacttcacagattatcattaatattatatataatattcataactaccccaaggttcaactctcaacgactcgtacgacaaagatcgc 11581085  T
Q  123 aaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctaca 222  Q
    ||||||||||||||| | ||| ||||| |||||||||||||||||||| ||||| | |||||||| |||||||||||||||| |||||||| |||||| |    
T  11581084 aaaatcctaaacaagcattctgtaaatgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattctcaaagttttattctaaa 11580985  T
Q  223 atct 226  Q
    ||||    
T  11580984 atct 11580981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 38 - 197
Target Start/End: Original strand, 22144247 - 22144406
Alignment:
Q  38 cttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaag 137  Q
    |||||||  ||||||||||||| ||| | ||| ||||| || |   |||||||||||||||||  |||||||| ||||||||| ||||||||||||||||    
T  22144247 cttcacaggtcatcattaatatcataaacaatcttcattacgactccaaggttcaactctcaacaactcgtgcgacaaagatcgcaaaatcctaaacaag 22144346  T
Q  138 taatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggt 197  Q
     | ||| ||| | ||  |||||||||||||||| ||||  | || ||||| |||||||||    
T  22144347 cattctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgagttcaggt 22144406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 84 - 230
Target Start/End: Original strand, 13095737 - 13095883
Alignment:
Q  84 caaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaa-tctttaaataggtcactcgcgaggcgagagactctgtttgcc 182  Q
    ||||||||||||||||| ||||||||| |||||| || ||||| ||||| ||||| | ||| |   |||||||||||||||||||| | ||||| | ||     
T  13095737 caaggttcaactctcaacgactcgtgcaacaaaggtcgcaaaaacctaa-caagtcactctgtttctaggtcactcgcgaggcgagggcctctgctcgct 13095835  T
Q  183 atggctagttcaggtcagattccca-aagtttcattctacaatctttcc 230  Q
     |||| ||||||||||||| ||||| ||||||||||||| |||||||||    
T  13095836 gtggcgagttcaggtcagaatcccacaagtttcattcta-aatctttcc 13095883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 8286654 - 8286586
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattc 218  Q
    |||||||||||||||||||| ||||| | ||||||||||||| |||||||| ||||| |||||||||||    
T  8286654 ggtcactcgcgaggcgagagcctctgctcgccatggctagtttaggtcagaatcccacaagtttcattc 8286586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 21985958 - 21985879
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcag-attcccaaagtttcattctacaatctttcc 230  Q
    |||||||||||||||||| | ||||| ||||| |||| |||||||||||| ||||| |||||||||||||| |||||||||    
T  21985958 ggtcactcgcgaggcgagggcctctgcttgccgtggcgagttcaggtcagaattccaaaagtttcattcta-aatctttcc 21985879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 23390308 - 23390228
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttcc 230  Q
    ||||||||| ||||||| || ||||  | |||||||| ||||||||||||| ||||| |||||||||||||||||||||||    
T  23390308 ggtcactcgtgaggcgatagcctctactcgccatggcgagttcaggtcagaatcccacaagtttcattctacaatctttcc 23390228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 24529530 - 24529610
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcag-attcccaaagtttcattctacaatctttcc 230  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||| |||| ||||| ||||||||||||||||| ||||||    
T  24529530 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcagatcagaattccaaaagtttcattctacaacctttcc 24529610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 24767277 - 24767177
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 122  Q
    ||||||||| | || ||||||| |||||||||||||| ||||||| |  |||| |||||| |||||||||||||  ||  |||||||| |||||||||||    
T  24767277 atcatcatataacaacttcacaaatcatcattaatatcatatatattcctcattactatcccaaggttcaactcataacaactcgtgcgacaaagatcac 24767178  T
Q  123 a 123  Q
    |    
T  24767177 a 24767177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 1096777 - 1096856
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttcc 230  Q
    |||||||||||||||||||| ||||  | ||| |||| ||||||||||||||| |||||  |||||||| ||||||||||    
T  1096777 ggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagatttccaaaagttcattctgcaatctttcc 1096856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 84 - 230
Target Start/End: Original strand, 25421775 - 25421921
Alignment:
Q  84 caaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgcca 183  Q
    |||||||||||||||||  |||||||| |||||| || |||||||||||  | | | ||  |   |||||||||||||||||||||| ||||  | |||     
T  25421775 caaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactcggtttctaggtcactcgcgaggcgagagcctctactcgccg 25421874  T
Q  184 tggctagttcaggtcaga-ttcccaaagtttcattctacaatctttcc 230  Q
    |||| |||||| |||||| |||| |||||||||||||| |||||||||    
T  25421875 tggcgagttcaagtcagatttccgaaagtttcattcta-aatctttcc 25421921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 96
Target Start/End: Original strand, 31061247 - 31061320
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactc 96  Q
    |||| |||||| ||||||| || |||||| ||||||||||| ||||||||||||||||||  |||| |||||||    
T  31061247 atcaccataaatcagcttcgcagatcatcgttaatattataaataatattcataactatcctaaggatcaactc 31061320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 22119998 - 22119934
Alignment:
Q  156 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattcta 220  Q
    ||||||||||||||| ||||| | |||||||| |||||| ||||||||| ||||||||||||||||    
T  22119998 ctcgcgaggcgagagcctctgctcgccatggcgagttca-gtcagattctccaaagtttcattcta 22119934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 9078262 - 9078341
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcag-attcccaaagtttcattctacaatctttcc 230  Q
    |||||||||||||||||||| ||||| | ||| |||| |||||||||||| ||||  || ||||||||||| |||||||||    
T  9078262 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaattcaaaaggtttcattcta-aatctttcc 9078341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 230
Target Start/End: Original strand, 13025553 - 13025699
Alignment:
Q  84 caaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaa-tctttaaataggtcactcgcgaggcgagagactctgtttgcc 182  Q
    |||||||||||||||||  | |||||| |||||| || ||||| ||||| ||||| | ||| |   |||||||||||||||||||| | || || | ||     
T  13025553 caaggttcaactctcaacaaatcgtgcaacaaaggtcgcaaaaacctaa-caagtcactctgtttctaggtcactcgcgaggcgagggcctttgctcgct 13025651  T
Q  183 atggctagttcaggtcagattccca-aagtttcattctacaatctttcc 230  Q
     |||| ||||||||||||| ||||| ||||||||||||| |||||||||    
T  13025652 gtggcgagttcaggtcagaatcccacaagtttcattcta-aatctttcc 13025699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 21871510 - 21871438
Alignment:
Q  24 tcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactc 96  Q
    |||||||| | || |||||||||||||||||||||| ||| ||| |  |||| |||||| |||||||||||||    
T  21871510 tcatcatatatcaacttcacatatcatcattaatatcatacatattcctcattactatcccaaggttcaactc 21871438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 21875790 - 21875718
Alignment:
Q  24 tcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactc 96  Q
    |||||||| | || |||||||||||||||||||||| ||| ||| |  |||| |||||| |||||||||||||    
T  21875790 tcatcatatatcaacttcacatatcatcattaatatcatacatattcctcattactatcccaaggttcaactc 21875718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 22107185 - 22107129
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca 207  Q
    |||||||||||||||||||| ||||| | |||||||  ||||||||||||| |||||    
T  22107185 ggtcactcgcgaggcgagagcctctgctcgccatggtgagttcaggtcagaatccca 22107129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 120
Target Start/End: Complemental strand, 22120119 - 22120036
Alignment:
Q  39 ttcacatatcatcattaatat--tatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatc 120  Q
    |||||||||||||||||||||  |||||||| |  |||| |||||| |||||||||||||  ||  |||||||| |||||||||    
T  22120119 ttcacatatcatcattaatatcatatatatattcctcattactatcccaaggttcaactcataacaactcgtgcgacaaagatc 22120036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 21292782 - 21292732
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcaga 201  Q
    |||||||||||||||||||| ||||| | ||| |||| |||||||||||||    
T  21292782 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcaga 21292732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 22075328 - 22075378
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcaga 201  Q
    |||||||||||||||||||| ||||| | ||| |||| |||||||||||||    
T  22075328 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcaga 22075378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 24767142 - 24767078
Alignment:
Q  156 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattcta 220  Q
    ||||||||||||||| ||||| | |||||| | |||||| ||||||||| ||||||||||||||||    
T  24767142 ctcgcgaggcgagagcctctgctcgccatgacgagttca-gtcagattctccaaagtttcattcta 24767078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 230
Target Start/End: Original strand, 25431635 - 25431783
Alignment:
Q  82 ctcaaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgc 181  Q
    |||||||||||||||||||  |||||||  |||||| || |||||||||||  | | | ||  |   | |||||||||||||| ||||| ||||  | ||    
T  25431635 ctcaaggttcaactctcaacaactcgtgtaacaaaggtcgcaaaatcctaacaaggcactcgatttctgggtcactcgcgaggtgagagcctctactcgc 25431734  T
Q  182 catggctagttcaggtcaga-ttcccaaagtttcattctacaatctttcc 230  Q
    | |||| |||||| |||||| |||| |||||||||||||| |||||||||    
T  25431735 cgtggcgagttcaagtcagatttccaaaagtttcattcta-aatctttcc 25431783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 40726036 - 40726073
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatatt 60  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  40726036 atcatcataaatcagcttcacagatcatcattaatatt 40726073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 120; Significance: 2e-61; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 23 - 226
Target Start/End: Original strand, 16962 - 17165
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 122  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||||||| ||||||| ||   ||||||||||| |||| ||||||||||||||||||| |    
T  16962 atcatcataaatcagcttcacagatcatcattaataatatatataatactcataaccattataaggttcaactatcaacgactcgtgctacaaagatcgc 17061  T
Q  123 aaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctaca 222  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||| ||||| | |||||||| ||||||||||| |||| |||||||| |||||| |    
T  17062 aaaatcctaaacaagtattctgtaaataggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcatattctcaaagttttattctaaa 17161  T
Q  223 atct 226  Q
    ||||    
T  17162 atct 17165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 7576 - 7512
Alignment:
Q  156 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagatt-cccaaagtttcattcta 220  Q
    ||||||||||||||| ||||| |||||||||| |||||| ||||||||  ||||||||||||||||    
T  7576 ctcgcgaggcgagagcctctgcttgccatggcgagttca-gtcagattatccaaagtttcattcta 7512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 120; Significance: 2e-61; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 23 - 230
Target Start/End: Complemental strand, 17248225 - 17248018
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 122  Q
    ||||||||||| || ||||||| |||||| |||||||||||||||||||||||||| | | ||||||| ||||||||| ||||||||| ||||||||| |    
T  17248225 atcatcataaatcatcttcacagatcatctttaatattatatataatattcataacgaccccaaggtttaactctcaacgactcgtgcgacaaagatcgc 17248126  T
Q  123 aaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctaca 222  Q
    ||||| ||||||||| | ||| ||| | |||||||||||||||||||| ||||| | |||||||| |||||||||||||||||||||||||||||||| |    
T  17248125 aaaattctaaacaagcattctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaa 17248026  T
Q  223 atctttcc 230  Q
    ||||||||    
T  17248025 atctttcc 17248018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 23 - 219
Target Start/End: Complemental strand, 53070637 - 53070441
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 122  Q
    ||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||| | ||||||||||||||||| ||||||||| ||||||||| |    
T  53070637 atcatcataaatcagcttcacaaatcatcattaatattatatacaatattcataactaccccaaggttcaactctcaacgactcgtgcgacaaagatcgc 53070538  T
Q  123 aaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattct 219  Q
    |||||||||||||||   ||| ||| | ||  |||||||||||||||| ||||  | |||||||| |||||||||||| |||| |||  ||||||||    
T  53070537 aaaatcctaaacaaggcttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagttcaggtcagcttccaaaaagttcattct 53070441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 23 - 137
Target Start/End: Original strand, 23274870 - 23274984
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 122  Q
    ||||||||||  |||||||||| ||||||||||||||||||  ||||||||||||||||| ||||| |||||||||||  |||||||| ||||||||| |    
T  23274870 atcatcataattcagcttcacagatcatcattaatattataattaatattcataactatcccaaggctcaactctcaacaactcgtgcgacaaagatcgc 23274969  T
Q  123 aaaatcctaaacaag 137  Q
    |||| ||||||||||    
T  23274970 aaaaacctaaacaag 23274984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 17672804 - 17672891
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgc 110  Q
    |||||||||||  ||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||    
T  17672804 atcatcataaataagcttcacagatcttcattaatattatatataatattcataactatctcaaggatcaactcacaacgactcgtgc 17672891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 24340661 - 24340584
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaa 100  Q
    ||||||||||| |||||||||| ||||||||||||||| || |||||||||||||||| | |||||||||||||||||    
T  24340661 atcatcataaatcagcttcacagatcatcattaatattgtaaataatattcataactaccccaaggttcaactctcaa 24340584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 77 - 230
Target Start/End: Complemental strand, 25476270 - 25476117
Alignment:
Q  77 actatctcaaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctg 176  Q
    |||| |||||||||||||||||||  |||||||| |||||| || |||||||||||  | | | ||| |   | |||||||||||||||||||| ||||     
T  25476270 actacctcaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctcta 25476171  T
Q  177 tttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttcc 230  Q
     | | | |||| ||||||||||||||||| |||||||||||||| |||||||||    
T  25476170 ctcgtcgtggcgagttcaggtcagattccaaaagtttcattctaaaatctttcc 25476117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 137
Target Start/End: Complemental strand, 2051138 - 2051024
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 122  Q
    |||||| || |||||||||||| |||||||||||||| ||| | ||| ||||| || | ||||| |||||||||||||  |||| ||| ||||||||| |    
T  2051138 atcatcttatagcagcttcacaaatcatcattaatatcataaacaatcttcattacgacctcaatgttcaactctcaacaactcatgcgacaaagatcgc 2051039  T
Q  123 aaaatcctaaacaag 137  Q
    |||||||||||||||    
T  2051038 aaaatcctaaacaag 2051024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 84 - 230
Target Start/End: Complemental strand, 40213599 - 40213453
Alignment:
Q  84 caaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgcca 183  Q
    ||||||| |||||||||  |||||||| |||||| || |||||||||||  | | | ||| |   | |||||||||||||||||||| ||||| | |||     
T  40213599 caaggttaaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccg 40213500  T
Q  184 tggctagttcaggtcagattcccaaagtttcattctacaatctttcc 230  Q
    |||| ||||||||| |||||||||||  |||||||||||||||||||    
T  40213499 tggcgagttcaggttagattcccaaaagttcattctacaatctttcc 40213453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 35 - 137
Target Start/End: Complemental strand, 52523654 - 52523552
Alignment:
Q  35 cagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaac 134  Q
    ||||||| || ||||||||||||||  |||| ||| ||||| |||| | ||| ||||||||||||| ||||||||| ||||||||| |||||||||||||    
T  52523654 cagcttctcagatcatcattaatatcttatacaatcttcattactaccccaaagttcaactctcaatgactcgtgcgacaaagatcgcaaaatcctaaac 52523555  T
Q  135 aag 137  Q
    |||    
T  52523554 aag 52523552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 14572831 - 14572968
Alignment:
Q  84 caaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgcca 183  Q
    |||||||||||||||||  |||||||| |||||| || ||||| |||||  | ||| ||| |   |||||||||||||||||||||| ||||  | ||||    
T  14572831 caaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaaggtactctgtttctaggtcactcgcgaggcgagagcctctactcgcca 14572930  T
Q  184 tggctagttcaggtcagattcccaaa-gtttcattcta 220  Q
    |||| ||||||||||||||| ||||| |||||||||||    
T  14572931 tggcgagttcaggtcagatttccaaaggtttcattcta 14572968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 13442583 - 13442663
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttcc 230  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||| ||||| |||||||||||||||||||||||    
T  13442583 ggtcactcgcgaggcgagagcctctgctcgccgtggcaagttcaggtcagaatcccacaagtttcattctacaatctttcc 13442663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 26687196 - 26687276
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttcc 230  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||| ||||| |||||||||||||||||||||||    
T  26687196 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttcc 26687276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 149 - 230
Target Start/End: Original strand, 17488164 - 17488246
Alignment:
Q  149 taggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttcc 230  Q
    |||||||||||||||||||||| ||||| | ||| |||| | ||||||||||| ||| | |||||||||||||||||||||||    
T  17488164 taggtcactcgcgaggcgagagcctctgctcgccgtggcgatttcaggtcagaatcctacaagtttcattctacaatctttcc 17488246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 12119708 - 12119651
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataacta 80  Q
    ||||||||||| |||||||||| ||| ||||||||||||||  |||||||||||||||    
T  12119708 atcatcataaatcagcttcacagatcttcattaatattataattaatattcataacta 12119651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 14576711 - 14576574
Alignment:
Q  84 caaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgcca 183  Q
    |||||||||||||||||  |||||||| |||||| || |||||||||||  | | | | | |   |||||||||||||||||||||| ||||  | |||     
T  14576711 caaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactttgtttctaggtcactcgcgaggcgagagcctctactcgccg 14576612  T
Q  184 tggctagttcaggtcagattcccaaa-gtttcattcta 220  Q
    ||||  |||||||||||||| ||||| |||||||||||    
T  14576611 tggcgtgttcaggtcagatttccaaaggtttcattcta 14576574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 14665786 - 14665883
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatc 120  Q
    ||||||||| | || ||||||| |||||||||||||| ||||||| |  |||| |||||| |||||||||||||  ||  |||||||| |||||||||    
T  14665786 atcatcatataacaacttcacaaatcatcattaatatcatatatattcctcattactatcacaaggttcaactcataacaactcgtgcgacaaagatc 14665883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 14668941 - 14669038
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatc 120  Q
    ||||||||| | || ||||||| |||||||||||||| ||||||| |  |||| |||||| |||||||||||||  ||  |||||||| |||||||||    
T  14668941 atcatcatataacaacttcacaaatcatcattaatatcatatatattcctcattactatcccaaggttcaactcataacaactcgtgcgacaaagatc 14669038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 14735299 - 14735396
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatc 120  Q
    ||||||||| | || ||||||| |||||||||||||| ||||||| |  |||| |||||| |||||||||||||  ||  |||||||| |||||||||    
T  14735299 atcatcatataacaacttcacaaatcatcattaatatcatatatattcctcattactatcacaaggttcaactcataacaactcgtgcgacaaagatc 14735396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 18438844 - 18438923
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcag-attcccaaagtttcattctacaatctttcc 230  Q
    |||||||||||||||||||| ||||| | ||| |||| | |||||||||| ||||| |||||||||||||| |||||||||    
T  18438844 ggtcactcgcgaggcgagagcctctgctcgccgtggcaacttcaggtcagaattccaaaagtttcattcta-aatctttcc 18438923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 20698248 - 20698180
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattc 218  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||| ||||| |||||||||||    
T  20698248 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattc 20698180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 197
Target Start/End: Original strand, 42386654 - 42386767
Alignment:
Q  84 caaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgcca 183  Q
    ||||||||||||| |||  |||||||| |||||| || ||||||||||||||||   ||| ||| | ||  |||||||||| ||||| ||||  | ||||    
T  42386654 caaggttcaactcacaacaactcgtgcgacaaagttcgcaaaatcctaaacaaggcttctgtaattgggcaactcgcgaggtgagagcctctactcgcca 42386753  T
Q  184 tggctagttcaggt 197  Q
    |||| |||||||||    
T  42386754 tggcgagttcaggt 42386767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 12934117 - 12934042
Alignment:
Q  155 actcgcgaggcgagagactctgtttgccatggctagttcagg-tcagattcccaaagtttcattctacaatctttcc 230  Q
    |||||||||||||||| ||||| | |||||||| |||||||| |||| ||| |||| |||||||||| |||||||||    
T  12934117 actcgcgaggcgagagtctctgctcgccatggcgagttcaggttcag-ttcacaaaatttcattctaaaatctttcc 12934042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 43841241 - 43841321
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttcc 230  Q
    |||||||||||||||||| | || || | ||  |||| ||||||||||||| | ||| |||||||||||||||||||||||    
T  43841241 ggtcactcgcgaggcgagggcctttgctcgctgtggcgagttcaggtcagaattccacaagtttcattctacaatctttcc 43841321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 230
Target Start/End: Complemental strand, 11424576 - 11424495
Alignment:
Q  149 taggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcaga-ttcccaaagtttcattctacaatctttcc 230  Q
    |||||| ||||||||||||||| ||||  | ||| |||| ||||||||||||| |||  |||||||||||||| |||||||||    
T  11424576 taggtcgctcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagagttcaaaaagtttcattcta-aatctttcc 11424495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 230
Target Start/End: Original strand, 17499646 - 17499728
Alignment:
Q  149 taggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttcc 230  Q
    ||||||||| | |||||||||| ||||| |  || |||| | ||||||||||| ||| | |||||||||||||||||||||||    
T  17499646 taggtcactagagaggcgagagcctctgctcaccgtggcgaattcaggtcagaatccaacaagtttcattctacaatctttcc 17499728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 12340068 - 12340132
Alignment:
Q  156 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattcta 220  Q
    ||||||||||||||| ||||| | |||||||| |||||| || |||||| ||||||||||||||||    
T  12340068 ctcgcgaggcgagagcctctgctcgccatggcgagttca-gttagattctccaaagtttcattcta 12340132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 14665921 - 14665985
Alignment:
Q  156 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattcta 220  Q
    ||||||||||||||| ||||| | ||||| || |||||| ||||||||| ||||||||||||||||    
T  14665921 ctcgcgaggcgagagcctctgctcgccattgcgagttca-gtcagattctccaaagtttcattcta 14665985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 14669076 - 14669140
Alignment:
Q  156 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattcta 220  Q
    ||||||||| ||||| ||||| | |||||||| ||||||| |||||||| ||||||||||||||||    
T  14669076 ctcgcgaggtgagagcctctgctcgccatggcgagttcag-tcagattctccaaagtttcattcta 14669140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 14735434 - 14735498
Alignment:
Q  156 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattcta 220  Q
    ||||||||||||||| ||||| | ||||| || |||||| ||||||||| ||||||||||||||||    
T  14735434 ctcgcgaggcgagagcctctgctcgccattgcgagttca-gtcagattctccaaagtttcattcta 14735498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 228
Target Start/End: Original strand, 14973164 - 14973241
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatcttt 228  Q
    ||||||| |||||||||||| ||||| | ||| |||| ||||||||||||| | |||||  ||| ||||| |||||||    
T  14973164 ggtcacttgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaattccaaaagttctttctaaaatcttt 14973241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 22147464 - 22147427
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatatt 60  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  22147464 atcatcataaatcagcttcacagatcatcattaatatt 22147427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 37642203 - 37642166
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatatt 60  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  37642203 atcatcataaatcagcttcacagatcatcattaatatt 37642166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 49667890 - 49667815
Alignment:
Q  155 actcgcgaggcgagagactctgtttgccatggctagttcagg-tcagattcccaaagtttcattctacaatctttcc 230  Q
    |||||||||||||||| ||||| | |||||||| |||||||| |||| ||| |||  |||||||||| |||||||||    
T  49667890 actcgcgaggcgagagcctctgctcgccatggcgagttcaggttcag-ttcacaatatttcattctaaaatctttcc 49667815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 2e-61; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 23 - 230
Target Start/End: Original strand, 433189 - 433396
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 122  Q
    ||||||||||| |||||| ||| ||||||||||||||||| ||||||||||||| ||| | ||||||||||||||||| ||||||||| ||||||||| |    
T  433189 atcatcataaatcagctttacagatcatcattaatattatttataatattcatagctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgc 433288  T
Q  123 aaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctaca 222  Q
    ||||||||||||||| | | |  || | |||||||||||||||||||| ||||| | |||||||| |||||||||||||||||||||||||||||||| |    
T  433289 aaaatcctaaacaagcattttgcaactgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaa 433388  T
Q  223 atctttcc 230  Q
    ||||||||    
T  433389 atctttcc 433396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 35 - 195
Target Start/End: Original strand, 16758845 - 16759005
Alignment:
Q  35 cagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaac 134  Q
    |||||||||| |||||||||||||| ||| | ||| ||||| || | | |||||||||||||||||  |||||||| ||||||||| |||||||||||||    
T  16758845 cagcttcacagatcatcattaatatcataaacaatcttcattacgaccccaaggttcaactctcaacaactcgtgcgacaaagatcgcaaaatcctaaac 16758944  T
Q  135 aagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcag 195  Q
     || | ||| ||| ||||  |||||||||| ||| | ||||  |||| ||||| |||||||    
T  16758945 gagcattctgtaactaggcaactcgcgaggtgagggcctctacttgctatggcgagttcag 16759005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 137
Target Start/End: Original strand, 21342275 - 21342389
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 122  Q
    ||||||||||| ||||||||||   || |||||||||||||  ||||||||||||| | | |||||||||||||||||  |||||||| |||| |||| |    
T  21342275 atcatcataaatcagcttcacaatacagcattaatattataattaatattcataaccaccccaaggttcaactctcaacaactcgtgcgacaacgatcgc 21342374  T
Q  123 aaaatcctaaacaag 137  Q
    |||| ||||||||||    
T  21342375 aaaaacctaaacaag 21342389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 137
Target Start/End: Original strand, 21347140 - 21347254
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 122  Q
    ||||||||||| ||||||||||   || |||||||||||||  ||||||||||||| | | |||||||||||||||||  |||||||| |||| |||| |    
T  21347140 atcatcataaatcagcttcacaatacagcattaatattataattaatattcataaccaccccaaggttcaactctcaacaactcgtgcgacaacgatcgc 21347239  T
Q  123 aaaatcctaaacaag 137  Q
    |||| ||||||||||    
T  21347240 aaaaacctaaacaag 21347254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 23 - 100
Target Start/End: Original strand, 21473126 - 21473203
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaa 100  Q
    ||||||||||| |||||||||| ||||||||||||||| || |||||||||||||||| | ||||||| |||||||||    
T  21473126 atcatcataaatcagcttcacagatcatcattaatattgtaaataatattcataactaccccaaggtttaactctcaa 21473203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 23 - 100
Target Start/End: Original strand, 21477699 - 21477776
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaa 100  Q
    ||||||||||| |||||||||| ||||||||||||||| || |||||||||||||||| | |||||||||| ||||||    
T  21477699 atcatcataaatcagcttcacagatcatcattaatattgtaaataatattcataactaccccaaggttcaattctcaa 21477776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 85 - 230
Target Start/End: Complemental strand, 50210090 - 50209945
Alignment:
Q  85 aaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccat 184  Q
    ||||||||||||||||  |||||||| |||||| || |||||||||||  | | | ||| |   | |||||||||||||||||||| ||||| | ||| |    
T  50210090 aaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgt 50209991  T
Q  185 ggctagttcaggtcag-attcccaaagtttcattctacaatctttcc 230  Q
    ||| |||||||||||| ||||| |||||||||||||| |||||||||    
T  50209990 ggcgagttcaggtcagaattccaaaagtttcattcta-aatctttcc 50209945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 34510090 - 34510169
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttcc 230  Q
    ||||||||| |||||||||| ||||| | ||| |||| ||||||||||||||| |||||  |||||||||||||||||||    
T  34510090 ggtcactcgtgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagttcattctacaatctttcc 34510169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 230
Target Start/End: Original strand, 22532505 - 22532658
Alignment:
Q  77 actatctcaaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaa-tctttaaataggtcactcgcgaggcgagagactct 175  Q
    |||| |||||||||||||||||||   ||||||| |||||| || ||||||||||| ||||| | ||| |   | |||||||||||||||||||| ||||    
T  22532505 actacctcaaggttcaactctcaacagctcgtgcaacaaaggtcgcaaaatcctaa-caagtcactctgtttttgggtcactcgcgaggcgagagcctct 22532603  T
Q  176 gtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttcc 230  Q
    | |  || |||| |||||| |||||||| |||||  |||||||||||||| ||||    
T  22532604 gctcaccgtggcgagttcaagtcagatttccaaaagttcattctacaatccttcc 22532658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 22354384 - 22354308
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatct 226  Q
    ||||||| |||||||||||| ||||  | ||| |||| ||||||||||||| ||||| |||||||||||||||||||    
T  22354384 ggtcacttgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatct 22354308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 38801205 - 38801147
Alignment:
Q  149 taggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca 207  Q
    |||||||||||||||||||||| ||||  | ||| |||| ||||||||||||| |||||    
T  38801205 taggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatccca 38801147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 23 - 226
Target Start/End: Complemental strand, 15554 - 15351
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 122  Q
    ||||||| ||| |||||||||| |||||||||||||||||||||||||  |||||||| | ||||||||||||||||| || |||||| |||||||||      
T  15554 atcatcacaaatcagcttcacagatcatcattaatattatatataatacacataactaccccaaggttcaactctcaacgattcgtgcgacaaagatcga 15455  T
Q  123 aaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctaca 222  Q
    |||||||||| |||||| | | |||||||||||||||||||||||||| ||||| | || ||||| |||||||||||||||||||||||||||||||| |    
T  15454 aaaatcctaagcaagtattttgtaaataggtcactcgcgaggcgagagcctctgctcgctatggcgagttcaggtcagattcccaaagtttcattctaaa 15355  T
Q  223 atct 226  Q
    ||||    
T  15354 atct 15351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 116; Significance: 4e-59; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 23 - 226
Target Start/End: Complemental strand, 17061899 - 17061696
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 122  Q
    ||||||||||| |||||||||| ||||| ||||||||||||| ||||||||||||||| | || |||||||||||||| ||||||||| ||||||||| |    
T  17061899 atcatcataaatcagcttcacagatcattattaatattatatgtaatattcataactaccccatggttcaactctcaacgactcgtgcgacaaagatcgc 17061800  T
Q  123 aaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctaca 222  Q
    ||||||||||||||| | ||| |||||||||||||||||||||||||| ||||  | ||||| || |||||||||||||||| |||||||| |||||| |    
T  17061799 aaaatcctaaacaagcattctgtaaataggtcactcgcgaggcgagagcctctactcgccatcgcgagttcaggtcagattctcaaagttttattctaaa 17061700  T
Q  223 atct 226  Q
    ||||    
T  17061699 atct 17061696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 23 - 230
Target Start/End: Original strand, 44116687 - 44116893
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 122  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||| | ||||||||||| ||||| ||||||||| | ||||||| |    
T  44116687 atcatcataaatcagtttcacatatcatcattaatattatatatattattcataactaccccaaggttcaaccctcaacgactcgtgcaataaagatcgc 44116786  T
Q  123 aaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctaca 222  Q
    |||||||||||| ||   ||| ||| |  ||||||||||||||||||| ||||| | |||||||| |||||||||||||||||||||||||||||||| |    
T  44116787 aaaatcctaaactagcgttctgtaactgagtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattcta-a 44116885  T
Q  223 atctttcc 230  Q
    ||||||||    
T  44116886 atctttcc 44116893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 23 - 219
Target Start/End: Complemental strand, 12756655 - 12756459
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 122  Q
    ||||||||||| |||| ||||| |||||||||||||||||||| |||||||||||||| | ||||||||||||||||| ||||||||| ||||||||| |    
T  12756655 atcatcataaatcagcatcacagatcatcattaatattatatacaatattcataactaccccaaggttcaactctcaacgactcgtgcgacaaagatcgc 12756556  T
Q  123 aaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattct 219  Q
    |||||||||||||||   | | ||| | ||  |||||||||||||||| ||||  | |||||||  |||||||||||| |||| |||  ||||||||    
T  12756555 aaaatcctaaacaaggcttttgtaattgggcaactcgcgaggcgagagcctctactcgccatggtgagttcaggtcagcttccaaaaagttcattct 12756459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 35 - 197
Target Start/End: Complemental strand, 2280045 - 2279883
Alignment:
Q  35 cagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaac 134  Q
    |||||||||| ||||||||| |||| ||| ||||| ||||| || | | |||||||||||||||||  |||||||  ||||||||| |||||||||||||    
T  2280045 cagcttcacagatcatcattgatatcataaataatcttcattacgaccccaaggttcaactctcaacaactcgtgtgacaaagatcgcaaaatcctaaac 2279946  T
Q  135 aagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggt 197  Q
    ||| | ||| ||| ||||  |||||||||||||| | ||||  | || ||||| |||||||||    
T  2279945 aagcattctataactaggcaactcgcgaggcgagggcctctactcgctatggcgagttcaggt 2279883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 10063761 - 10063684
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaa 100  Q
    ||||||||||| |||||||||||||| ||||||||||| || |||||||||||||||| | |||||||||||||||||    
T  10063761 atcatcataaatcagcttcacatatcttcattaatattgtaaataatattcataactaccccaaggttcaactctcaa 10063684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 38898360 - 38898287
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactc 96  Q
    ||||||||||| ||||||| || |||||||||||||||||| |||||||||||||||||| ||||| |||||||    
T  38898360 atcatcataaatcagcttcgcagatcatcattaatattataaataatattcataactatcccaaggatcaactc 38898287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 19486682 - 19486605
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaa 100  Q
    ||||||||||| |||||||||| ||||||||||||||| ||  ||||||||||||||| |  ||||||||||||||||    
T  19486682 atcatcataaatcagcttcacagatcatcattaatattttaattaatattcataactaccctaaggttcaactctcaa 19486605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 9509498 - 9509578
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttcc 230  Q
    |||||||||||||||||||| ||||  | ||| |||| ||||||||||||| ||||| |||||||||||||||||||||||    
T  9509498 ggtcactcgcgaggcgagagcctctcctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttcc 9509578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 197
Target Start/End: Complemental strand, 12255707 - 12255556
Alignment:
Q  46 atcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaatcttt 145  Q
    ||||||||||||||  |||| ||| ||||| |||| | |||  ||||||||||||  |||||||  ||||||||| |||||||||||||||| | ||| |    
T  12255707 atcatcattaatatattatacaatcttcattactaccccaaaattcaactctcaacaactcgtgtgacaaagatcgcaaaatcctaaacaagcattctgt 12255608  T
Q  146 aaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggt 197  Q
    || | ||  |||||||||||||||| ||||  | || ||||| |||||||||    
T  12255607 aactgggaaactcgcgaggcgagagcctctactcgctatggcgagttcaggt 12255556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 230
Target Start/End: Complemental strand, 15143850 - 15143769
Alignment:
Q  149 taggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttcc 230  Q
    |||||||||||||||||||||| ||||| | |||||||| ||| ||||||||| || ||||  ||||||||| |||||||||    
T  15143850 taggtcactcgcgaggcgagagcctctgctcgccatggcgagtacaggtcagaatcacaaaagttcattctaaaatctttcc 15143769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 39267586 - 39267486
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 122  Q
    ||||||||| | || ||||||| |||||||||||||| ||||||| |  |||| |||||| |||||||||||||  ||  |||||||| |||||||||||    
T  39267586 atcatcatataacaacttcacagatcatcattaatatcatatatattcctcattactatcacaaggttcaactcataacaactcgtgcgacaaagatcac 39267487  T
Q  123 a 123  Q
    |    
T  39267486 a 39267486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 84 - 230
Target Start/End: Original strand, 38227723 - 38227869
Alignment:
Q  84 caaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgcca 183  Q
    |||||||||||||| ||  |||||||| |||||| || ||||| |||||  | | | ||| |  || |||||||||||||||||||| ||||| | |||     
T  38227723 caaggttcaactcttaacaactcgtgcaacaaaggtcgcaaaaacctaacaaggcactctgtttatgggtcactcgcgaggcgagagcctctgctcgccg 38227822  T
Q  184 tggctagttcaggtcagattcc-caaagtttcattctacaatctttcc 230  Q
    |||| ||||||||||||| |||  |||||||||||||| |||||||||    
T  38227823 tggcgagttcaggtcagaatccaaaaagtttcattcta-aatctttcc 38227869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 9751490 - 9751393
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatc 120  Q
    ||||||||| | || ||||||| |||||||||||||| ||||||| |  |||| |||||| |||||||||||||  ||  |||||||| |||||||||    
T  9751490 atcatcatataacaacttcacaaatcatcattaatatcatatatattcctcattactatcccaaggttcaactcataacaactcgtgcgacaaagatc 9751393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 3564175 - 3564096
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttcc 230  Q
    ||||||||||||||||||||  | || | ||  |||| ||||||||||||||| |||||  |||||||||||||||||||    
T  3564175 ggtcactcgcgaggcgagagcatttgctcgctgtggcgagttcaggtcagatttccaaaagttcattctacaatctttcc 3564096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 123
Target Start/End: Complemental strand, 2832230 - 2832145
Alignment:
Q  38 cttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcaca 123  Q
    ||||||| |||||||||||||| ||||||| |  |||| |||||| |||||||||||||  ||  |||||||| |||| |||||||    
T  2832230 cttcacaaatcatcattaatatcatatatattcctcattactatcccaaggttcaactcataacaactcgtgcgacaaggatcaca 2832145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 11995835 - 11995771
Alignment:
Q  156 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattcta 220  Q
    ||||||||||||||| ||||| |||||||||| |||||| ||||||||| ||||| ||||||||||    
T  11995835 ctcgcgaggcgagagcctctgcttgccatggcgagttca-gtcagattctccaaattttcattcta 11995771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 12699141 - 12699221
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttcc 230  Q
    |||||||| ||||| ||||| ||||| | ||| |||| ||||||||||||| |||||  |||||||||| |||||||||||    
T  12699141 ggtcactcacgaggtgagagcctctgctcgccgtggcgagttcaggtcagaatcccacgagtttcattcaacaatctttcc 12699221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 139
Target Start/End: Original strand, 16091951 - 16092055
Alignment:
Q  35 cagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaac 134  Q
    ||||||||||||||||||||||||||||||| ||  | |||  ||| | ||||| |||||||  ||   ||||||| ||||||||| ||||| | |||||    
T  16091951 cagcttcacatatcatcattaatattatatacaacctccattcctaccccaaggatcaactcataacatctcgtgcgacaaagatcgcaaaaccgtaaac 16092050  T
Q  135 aagta 139  Q
    |||||    
T  16092051 aagta 16092055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 199
Target Start/End: Complemental strand, 27847645 - 27847597
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtca 199  Q
    |||||||||||||||||||| ||||| ||||| |||| |||||||||||    
T  27847645 ggtcactcgcgaggcgagagcctctgcttgccgtggcgagttcaggtca 27847597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 207
Target Start/End: Original strand, 40443698 - 40443754
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca 207  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||| |||||    
T  40443698 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 40443754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 65
Target Start/End: Complemental strand, 9177597 - 9177562
Alignment:
Q  30 taaagcagcttcacatatcatcattaatattatata 65  Q
    |||| |||||||||||||||||||||||||||||||    
T  9177597 taaaacagcttcacatatcatcattaatattatata 9177562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 18302494 - 18302558
Alignment:
Q  156 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagatt-cccaaagtttcattcta 220  Q
    ||||||||||||||| ||||| | |||||||| |||||| ||||||||  ||||||||||||||||    
T  18302494 ctcgcgaggcgagagcctctgctcgccatggcgagttca-gtcagattatccaaagtttcattcta 18302558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 39267447 - 39267387
Alignment:
Q  160 cgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattcta 220  Q
    ||||||||||| ||||| | |||||||| |||||| ||||||||| ||||||||||||||||    
T  39267447 cgaggcgagagcctctgctcgccatggcgagttca-gtcagattctccaaagtttcattcta 39267387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 8e-48; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 23 - 219
Target Start/End: Original strand, 18456897 - 18457093
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 122  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||  | ||||||||||||||||| ||||||||| ||||||||| |    
T  18456897 atcatcataaatcagcttcacagatcatcattaatattatatataatattcataactgccccaaggttcaactctcaacgactcgtgcgacaaagatcgc 18456996  T
Q  123 aaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattct 219  Q
    |||||||| ||||||   ||| ||| | ||  |||||||||||||||| ||||  | ||||||||||||||||||||| |||| |||  ||||||||    
T  18456997 aaaatcctgaacaaggcttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggctagttcaggtcagcttccaaaaagttcattct 18457093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 23 - 137
Target Start/End: Original strand, 25644504 - 25644618
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 122  Q
    ||||||||| | |||||||||| |||||||||||||| ||||||||| || ||||||| | ||||||||||||||||   |||||||| ||||||||| |    
T  25644504 atcatcatatatcagcttcacagatcatcattaatatcatatataatctttataactaccccaaggttcaactctcagcaactcgtgcgacaaagatcgc 25644603  T
Q  123 aaaatcctaaacaag 137  Q
    |||| ||||||||||    
T  25644604 aaaaacctaaacaag 25644618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 8227449 - 8227372
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaa 100  Q
    ||||||||||| |||||||||| ||||||||||||||||||  ||||||||||||||| |  ||||||||||||||||    
T  8227449 atcatcataaatcagcttcacagatcatcattaatattataattaatattcataactaccctaaggttcaactctcaa 8227372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 155 - 220
Target Start/End: Complemental strand, 29808691 - 29808626
Alignment:
Q  155 actcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattcta 220  Q
    |||||||||||||||| ||||| | |||||||| ||||||||||||||||||||||||||||||||    
T  29808691 actcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattcta 29808626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 149 - 230
Target Start/End: Complemental strand, 22780041 - 22779959
Alignment:
Q  149 taggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttcc 230  Q
    ||||| |||||||||||||||| || || ||||| |||| |||| |||||||| ||||| |||||||||||||||||||||||    
T  22780041 taggttactcgcgaggcgagagcctttgcttgccgtggcgagtttaggtcagaatcccacaagtttcattctacaatctttcc 22779959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 230
Target Start/End: Original strand, 20594081 - 20594162
Alignment:
Q  149 taggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttcc 230  Q
    |||||||||||||||||||||| ||||| | ||| | || ||||||||||||||| |||||  || ||||||||||||||||    
T  20594081 taggtcactcgcgaggcgagagcctctgctcgccgtagcgagttcaggtcagatttccaaaagtttattctacaatctttcc 20594162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 29060850 - 29060929
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttcc 230  Q
    |||||||||||||||||||| ||||  | | | |||| ||||||||||||||| |||||  |||||||||||||||||||    
T  29060850 ggtcactcgcgaggcgagagcctctactcgtcgtggcgagttcaggtcagatttccaaaagttcattctacaatctttcc 29060929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 220
Target Start/End: Complemental strand, 28496280 - 28496214
Alignment:
Q  155 actcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattcta 220  Q
    |||||||||||||||| ||||| | |||||||| |||||||||||||||| | ||||||||||||||    
T  28496280 actcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattctcaaaagtttcattcta 28496214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 18821631 - 18821563
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattc 218  Q
    |||| ||||||||||||||| ||||| | |||||||| ||||||||||||| ||||| |||||||||||    
T  18821631 ggtcgctcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttcattc 18821563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 20360772 - 20360704
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattc 218  Q
    |||||||||||||||||||| ||| | | |||||||| ||||||||||||| ||||| |||||||||||    
T  20360772 ggtcactcgcgaggcgagagcctcagctcgccatggcgagttcaggtcagaatcccacaagtttcattc 20360704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 19303352 - 19303282
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcaga-ttcccaaagtttcattcta 220  Q
    |||||||| ||||||||||| ||||| | ||| |||| ||||||||||||| |||| ||||||||||||||    
T  19303352 ggtcactctcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagtttcattcta 19303282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 15894237 - 15894185
Alignment:
Q  156 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaa 208  Q
    ||||||||| ||||||||||| | |||||||| ||||||||||||| ||||||    
T  15894237 ctcgcgaggtgagagactctgctcgccatggcgagttcaggtcagaatcccaa 15894185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 119
Target Start/End: Complemental strand, 27325374 - 27325278
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagat 119  Q
    ||||||||| | || ||||||| ||||||||||||||  |||||| |  |||| |||||| |||||||||||||  ||  |||||||| ||||||||    
T  27325374 atcatcatataacaacttcacagatcatcattaatatcttatatattcctcattactatcccaaggttcaactcataacaactcgtgcgacaaagat 27325278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 16920445 - 16920395
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcaga 201  Q
    |||||||||| ||||||||| ||||| | |||||||| |||||||||||||    
T  16920445 ggtcactcgcaaggcgagagcctctgctcgccatggcgagttcaggtcaga 16920395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 230
Target Start/End: Complemental strand, 18409704 - 18409559
Alignment:
Q  85 aaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccat 184  Q
    ||||||||||||||||  |||||||| |||||| ||  ||||||||||  | | | ||| |   | ||||||| | |||||||||| ||||| | ||| |    
T  18409704 aaggttcaactctcaataactcgtgcaacaaaggtcgtaaaatcctaacaaggcactctgtttctgggtcactagagaggcgagagcctctgctcgccgt 18409605  T
Q  185 ggctagttcaggtcag-attcccaaagtttcattctacaatctttcc 230  Q
    ||| |||||||||||| ||||  |||||||||||||| |||||||||    
T  18409604 ggcgagttcaggtcagaattcaaaaagtttcattcta-aatctttcc 18409559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 21939699 - 21939763
Alignment:
Q  156 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattcta 220  Q
    ||||||||||||||| ||||| | |||||||| |||||| ||||||||| ||||||||| ||||||    
T  21939699 ctcgcgaggcgagagcctctgctcgccatggcgagttca-gtcagattctccaaagttttattcta 21939763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 17287608 - 17287528
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttcc 230  Q
    |||||||| |||| | |||| ||||  | ||| |||| |||| |||||||| ||||| |||||||||||||||||||||||    
T  17287608 ggtcactcacgagacaagagcctctaatcgccgtggcgagtttaggtcagaatcccacaagtttcattctacaatctttcc 17287528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 20638095 - 20638027
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattc 218  Q
    |||||||||||||| ||||| || || | ||| |||| ||||||||||||| ||||| |||||||||||    
T  20638095 ggtcactcgcgaggtgagagcctttgctcgccgtggcgagttcaggtcagaatcccacaagtttcattc 20638027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 207
Target Start/End: Original strand, 22831811 - 22831867
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca 207  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||| ||| |||||    
T  22831811 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaatccca 22831867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 23 - 219
Target Start/End: Complemental strand, 20364 - 20168
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 122  Q
    ||||||||||| |||||||||| ||||||||||| |||||||| |||||||||||||||| ||||||||||||||||| ||||||||| ||||||| | |    
T  20364 atcatcataaatcagcttcacagatcatcattaacattatatacaatattcataactatcccaaggttcaactctcaacgactcgtgcgacaaagaccgc 20265  T
Q  123 aaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattct 219  Q
    |||||||||||||||   ||| ||| ||||  ||| |||||||||||| ||||  | |||||||| |||||||||||| |||| |||  ||||||||    
T  20264 aaaatcctaaacaaggcttctgtaattaggcaacttgcgaggcgagagcctctactcgccatggcgagttcaggtcagcttccaaaaagttcattct 20168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 23 - 175
Target Start/End: Complemental strand, 79268 - 79116
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 122  Q
    ||||||||||| |||||||||  |||||||||||||||||||| |||||||||||||| | ||||||||||||||||| ||||||||| ||||||||| |    
T  79268 atcatcataaatcagcttcactgatcatcattaatattatatacaatattcataactaccccaaggttcaactctcaatgactcgtgcgacaaagatcgc 79169  T
Q  123 aaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactct 175  Q
    |||||||||||||||   ||| ||| | ||  |||||||||||||||| ||||    
T  79168 aaaatcctaaacaaggcttctgtaattgggcaactcgcgaggcgagagcctct 79116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 230
Target Start/End: Complemental strand, 17093 - 16947
Alignment:
Q  84 caaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgcca 183  Q
    ||||||| |||||||||  |||||||| |||||| || |||||||||||  | ||| ||| |   | |||||||||||||||||||| ||||| |  ||     
T  17093 caaggtttaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaataaggtactctgtttctgggtcactcgcgaggcgagagcctctgctctccg 16994  T
Q  184 tggctagttcaggtcag-attcccaaagtttcattctacaatctttcc 230  Q
    |||| |||||||||||| ||||| |||||||||||||| |||||||||    
T  16993 tggcgagttcaggtcagaattccaaaagtttcattcta-aatctttcc 16947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 92 - 230
Target Start/End: Complemental strand, 1947 - 1809
Alignment:
Q  92 aactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagt 191  Q
    ||||||||| ||||||||| ||||||||| |||||||||||||||| | ||| ||| | |||||||||||||||||||| ||||| | |||||||| | |    
T  1947 aactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgaat 1848  T
Q  192 tcaggtcagattcccaaagtttcattctacaatctttcc 230  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  1847 tcaggtcagatttccaaagtttcattctaaaatctttcc 1809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 23 - 219
Target Start/End: Original strand, 12111 - 12307
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 122  Q
    ||||||||||| |||||||||| || | ||||||||||||||| |||||||||||||| | ||||||||||||||||| ||||||||  ||||||||| |    
T  12111 atcatcataaatcagcttcacagattaacattaatattatatacaatattcataactaccccaaggttcaactctcaacgactcgtgtgacaaagatcgc 12210  T
Q  123 aaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattct 219  Q
    ||||||||||||| |   ||| ||| | ||  |||||||||| ||||| ||||  | |||||||| |||||||||||| |||| |||  ||||||||    
T  12211 aaaatcctaaacagggcttctgtaattgggcaactcgcgaggtgagagcctctactcgccatggcgagttcaggtcagtttccaaaaagttcattct 12307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 23 - 165
Target Start/End: Original strand, 225589 - 225731
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 122  Q
    ||||||||| | ||||||||||  |||| |||||||| ||||||||| |||||||||| | |||||||||||||||||  |||||||| ||||||||| |    
T  225589 atcatcatatatcagcttcacagttcattattaatatcatatataatcttcataactaccccaaggttcaactctcaacaactcgtgcgacaaagatcgc 225688  T
Q  123 aaaatcctaaacaagtaatctttaaataggtcactcgcgaggc 165  Q
    ||||||||||||||| | ||| ||| || || |||||||||||    
T  225689 aaaatcctaaacaagcattctgtaactatgtaactcgcgaggc 225731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 3e-29; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 23 - 136
Target Start/End: Original strand, 19672010 - 19672122
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 122  Q
    ||||||||| | |||||||||| || ||||||||||||||| |||||||||||||||| | |||||||||||||||||  |||||||| ||||||||| |    
T  19672010 atcatcatagatcagcttcacagattatcattaatattataaataatattcataacta-cccaaggttcaactctcaacaactcgtgcgacaaagatcgc 19672108  T
Q  123 aaaatcctaaacaa 136  Q
    ||||||||||||||    
T  19672109 aaaatcctaaacaa 19672122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 35 - 197
Target Start/End: Complemental strand, 23708545 - 23708383
Alignment:
Q  35 cagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaac 134  Q
    |||||||||| |||||||||||||| ||| | ||| ||||| || | | |||||||||||| ||||  |||||||| ||||||||| |||||||||||||    
T  23708545 cagcttcacagatcatcattaatatcataaacaatcttcattacgaccccaaggttcaactatcaacaactcgtgcgacaaagatcgcaaaatcctaaac 23708446  T
Q  135 aagtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcaggt 197  Q
    ||| | ||| ||| | ||| |||||| ||||||||| ||||  | || ||||| |||||||||    
T  23708445 aagcattctgtaactgggtaactcgcaaggcgagagcctctactcgctatggcgagttcaggt 23708383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 84 - 230
Target Start/End: Original strand, 23660265 - 23660411
Alignment:
Q  84 caaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgcca 183  Q
    |||||||||||||||||  |||||||| | |||| |||||||| |||||  | | | ||| |   | |||||||| ||||||||||| ||||| | |||     
T  23660265 caaggttcaactctcaataactcgtgcaataaaggtcacaaaaacctaacaaggcactctgtttctgggtcactcacgaggcgagagcctctgctcgccg 23660364  T
Q  184 tggctagttcaggtcagattcccaaagtttcattctacaatctttcc 230  Q
    |||| ||||||||||||||||| |||||||||||||| |||||||||    
T  23660365 tggcgagttcaggtcagattccaaaagtttcattctaaaatctttcc 23660411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 32451741 - 32451661
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttcc 230  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||| ||||| |||||||||||||||||||||||    
T  32451741 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttcc 32451661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 229
Target Start/End: Complemental strand, 22737994 - 22737913
Alignment:
Q  149 taggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttc 229  Q
    |||||||||||||||||||||| ||||| | ||| |||| ||||||| ||||| ||||| ||||||||||||||||||||||    
T  22737994 taggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcagttcagaatcccacaagtttcattctacaatctttc 22737913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 27753884 - 27753964
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttcc 230  Q
    ||||||| |||||||||||| ||||| | ||| |||| ||||||||||||| ||||| |||||||||||||||||||||||    
T  27753884 ggtcacttgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttcc 27753964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 298626 - 298547
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttcc 230  Q
    |||||||||||||||||||| ||||  | ||| |||| ||||||||||||| ||||| ||||||||||||| |||||||||    
T  298626 ggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccacaagtttcattcta-aatctttcc 298547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 23076755 - 23076829
Alignment:
Q  155 actcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttcc 230  Q
    |||||||||||||||| ||||  | ||| |||| ||||||||||||| | |||||||||||||||| |||||||||    
T  23076755 actcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaattccaaagtttcattcta-aatctttcc 23076829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 22731041 - 22730965
Alignment:
Q  155 actcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttcc 230  Q
    ||||| |||||||||| || || |  || |||| ||||||||||||| ||||| |||||||||||||||||||||||    
T  22731041 actcgtgaggcgagagcctttgctccccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttcc 22730965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 65
Target Start/End: Original strand, 23004944 - 23004974
Alignment:
Q  35 cagcttcacatatcatcattaatattatata 65  Q
    |||||||||||||||||||||||||||||||    
T  23004944 cagcttcacatatcatcattaatattatata 23004974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 199
Target Start/End: Original strand, 23286168 - 23286218
Alignment:
Q  149 taggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtca 199  Q
    |||||||||||||||||||||| ||||| | ||| |||| |||||||||||    
T  23286168 taggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtca 23286218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 207
Target Start/End: Original strand, 20309414 - 20309470
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca 207  Q
    |||||||||||||||||||| ||||| |  || |||| ||||||||||||| |||||    
T  20309414 ggtcactcgcgaggcgagagcctctgctcaccgtggcgagttcaggtcagaatccca 20309470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 175
Target Start/End: Complemental strand, 20520050 - 20519978
Alignment:
Q  104 ctcgtgctacaaagatcacaaaatcctaaacaag-taatctttaaataggtcactcgcgaggcgagagactct 175  Q
    ||||||| ||||||||| ||||| |||||||||| || ||| ||| ||||  |||||||||||||||| ||||    
T  20520050 ctcgtgcaacaaagatcgcaaaaccctaaacaaggtattctgtaactaggcaactcgcgaggcgagagcctct 20519978  T

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Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 22337358 - 22337406
Alignment:
Q  84 caaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaa 132  Q
    |||||||||||||||||  |||||||| |||||| |||||||| |||||    
T  22337358 caaggttcaactctcaacaactcgtgcaacaaaggtcacaaaaacctaa 22337406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 17965 - 17888
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaa 100  Q
    ||||||||||| |||||||||| ||||||||||||||| || |||||||||||||||| | |||||||||||| ||||    
T  17965 atcatcataaatcagcttcacagatcatcattaatattgtaaataatattcataactaccccaaggttcaactttcaa 17888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 2112 - 2039
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactc 96  Q
    ||||||||||| |||||||||| |||||| ||||||||||| |||||||| |||||||||  |||| |||||||    
T  2112 atcatcataaatcagcttcacagatcatcgttaatattataaataatattgataactatcctaaggatcaactc 2039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 50; Significance: 9e-20; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 4817 - 4886
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattcta 220  Q
    |||||||||||| ||||||| ||||| | |||||||| ||||||||||||||||||||||||||||||||    
T  4817 ggtcactcgcgaagcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattcta 4886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 12399 - 12468
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattcta 220  Q
    |||||||||||| ||||||| ||||| | |||||||| ||||||||||||||||||||||||||||||||    
T  12399 ggtcactcgcgaagcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattcta 12468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 22351 - 22420
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattcta 220  Q
    |||||||||||| ||||||| ||||| | |||||||| ||||||||||||||||||||||||||||||||    
T  22351 ggtcactcgcgaagcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattcta 22420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 124894 - 124974
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttcc 230  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||| ||||| |||||||||||||||||||||||    
T  124894 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttcc 124974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 52221 - 52301
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttcc 230  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||| ||||| |||||||||||||||||||||||    
T  52221 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttcc 52301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 167791 - 167721
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattcta 220  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||| ||||| |||||||| ||||    
T  167791 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcaatcta 167721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 339762 - 339683
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttcc 230  Q
    |||||||||||||||||||| ||||| | ||| |||| |||||| ||||||||||||||  |||||||||||||||||||    
T  339762 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcatgtcagattcccaaaagttcattctacaatctttcc 339683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 151 - 228
Target Start/End: Original strand, 13401 - 13479
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatcttt 228  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||| ||||| |||||||||||||||||||||    
T  13401 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatcttt 13479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 34437 - 34500
Alignment:
Q  157 tcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattcta 220  Q
    |||||||||||||| ||||| | |||||||| ||||| |||||||||| ||||| ||||||||||    
T  34437 tcgcgaggcgagagcctctgctcgccatggcgagttc-ggtcagattctccaaattttcattcta 34500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 151 - 229
Target Start/End: Original strand, 39786 - 39864
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttc 229  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||||| |||||  ||||||||||||||||||    
T  39786 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagttcattctacaatctttc 39864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 151 - 229
Target Start/End: Complemental strand, 75026 - 74948
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttc 229  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||||| |||||  ||||||||||||||||||    
T  75026 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagttcattctacaatctttc 74948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 151 - 228
Target Start/End: Complemental strand, 25876 - 25799
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatcttt 228  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||||| |||||  |||||||||||||||||    
T  25876 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaaattcattctacaatcttt 25799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 33306 - 33226
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcaga-ttcccaaagtttcattctacaatctttcc 230  Q
    |||||| ||||||||||||| || || | ||| |||| ||||||||| ||| |||| |||||||||||||| |||||||||    
T  33306 ggtcacacgcgaggcgagagcctttgctcgccgtggcgagttcaggtaagacttccaaaagtttcattctaaaatctttcc 33226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 164574 - 164515
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatc 82  Q
    ||||||||||| |||||||||| |||||| ||||||||||| ||||||||||||||||||    
T  164574 atcatcataaatcagcttcacagatcatcgttaatattataaataatattcataactatc 164515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 161073 - 161014
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatc 82  Q
    ||||||||||| |||||||||| |||||| ||||||||||| |||||||| |||||||||    
T  161073 atcatcataaatcagcttcacagatcatcgttaatattataaataatattgataactatc 161014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 149 - 230
Target Start/End: Original strand, 20710 - 20792
Alignment:
Q  149 taggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttcc 230  Q
    |||||| ||||||||||||||| ||||| | ||| |||| ||||||||||||| ||||| ||||||||||||| |||||||||    
T  20710 taggtcgctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctataatctttcc 20792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 226
Target Start/End: Original strand, 40155 - 40297
Alignment:
Q  84 caaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaacaagtaatctttaaataggtcactcgcgaggcgagagactctgtttgcca 183  Q
    |||||||||||||||||  |||||||| |||||| || ||||  |||||  | ||| ||| |   | |||||||||||||||||||| ||||  | |||     
T  40155 caaggttcaactctcaacaactcgtgcaacaaaggtcgcaaacacctaacaaggtactctgtttctgggtcactcgcgaggcgagagcctctactcgccg 40254  T
Q  184 tggctagttcaggtcagattcccaaagtttcattctacaatct 226  Q
    |||| ||||||||||||||| |||||  |||||||||||||||    
T  40255 tggcgagttcaggtcagatttccaaaagttcattctacaatct 40297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 85563 - 85490
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactc 96  Q
    ||||||||||| |||||||||| |||||| ||||||||| | ||||||||||||||||||  |||| |||||||    
T  85563 atcatcataaatcagcttcacagatcatcgttaatattaaaaataatattcataactatcctaaggatcaactc 85490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 3779 - 3859
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttcc 230  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||| ||||| |||||| ||||||||||| ||||    
T  3779 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttgattctacaatcattcc 3859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 229
Target Start/End: Original strand, 652 - 730
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttc 229  Q
    |||||||||||||||||||| ||||  | |||  ||| ||||||| ||||||||| |||||||||||||| | ||||||    
T  652 ggtcactcgcgaggcgagagcctctactcgccgcggcgagttcagttcagattccaaaagtttcattctaaattctttc 730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 16411 - 16331
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaa-gtttcattctacaatctttcc 230  Q
    |||||||||||||||||||| ||||| | |||||||| ||||||||| ||||| ||||| ||||||||| | |||||||||    
T  16411 ggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggttagatttccaaacgtttcattcgaaaatctttcc 16331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 9774 - 9674
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcac 122  Q
    ||||||||| | || ||||||| |||||||||||||| ||||||| |  |||| |||||| |||||||||||||  ||  |||||||| |||||||||||    
T  9774 atcatcatataacaacttcacaaatcatcattaatatcatatatattcctcattactatcccaaggttcaactcataacaactcgtgcgacaaagatcac 9675  T
Q  123 a 123  Q
    |    
T  9674 a 9674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 9639 - 9575
Alignment:
Q  156 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattcta 220  Q
    ||||||||||||||| ||||| | |||||| | |||||| ||||||||| ||||||||||||||||    
T  9639 ctcgcgaggcgagagcctctgctcgccatgacgagttca-gtcagattctccaaagtttcattcta 9575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 224
Target Start/End: Complemental strand, 24115 - 24039
Alignment:
Q  149 taggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaat 224  Q
    |||||||||||||||||||||| ||||| | ||  |||| ||||||||||||| ||||| |||||||||||||||||    
T  24115 taggtcactcgcgaggcgagagcctctgctcgctgtggcgagttcaggtcagaatcccacaagtttcattctacaat 24039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 2160 - 2240
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttcc 230  Q
    ||||||||| ||||||| || ||||  | |||||||| ||||||||||||| ||||| |||||||||||||||||||||||    
T  2160 ggtcactcgtgaggcgatagcctctactcgccatggcgagttcaggtcagaatcccacaagtttcattctacaatctttcc 2240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 207324 - 207260
Alignment:
Q  156 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattcta 220  Q
    ||||||||||||||| ||||| | |||||||| |||||| ||||||||| ||||||||||||||||    
T  207324 ctcgcgaggcgagagcctctgctcgccatggcgagttca-gtcagattctccaaagtttcattcta 207260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 207459 - 207362
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatc 120  Q
    ||||||||| | || ||||||| |||||||||||||| || |||| |  |||| |||||| |||||||||||||  ||  |||||||| |||||||||    
T  207459 atcatcatataacaacttcacaaatcatcattaatatcatgtatattcctcattactatcccaaggttcaactcataacaactcgtgcgacaaagatc 207362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 137
Target Start/End: Original strand, 13324 - 13426
Alignment:
Q  35 cagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaac 134  Q
    |||||||||| ||||||||| |||| ||||| ||| | ||| |||| | ||||||| |||||  ||  |||||||| ||||||||| |||||||||||||    
T  13324 cagcttcacagatcatcattgatatcatatacaatttccattactaccccaaggtttaactcataacaactcgtgcgacaaagatcgcaaaatcctaaac 13423  T
Q  135 aag 137  Q
    |||    
T  13424 aag 13426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 137
Target Start/End: Complemental strand, 16026 - 15924
Alignment:
Q  35 cagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaac 134  Q
    |||||||||| ||||||||| |||| ||||| ||| | ||| |||| |  ||||||||||||  ||  ||| |||| ||||||||| |||||||||||||    
T  16026 cagcttcacagatcatcattgatatcatatacaatttccattactacccaaaggttcaactcataacaacttgtgcgacaaagatcgcaaaatcctaaac 15927  T
Q  135 aag 137  Q
    |||    
T  15926 aag 15924  T

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Target: scaffold0010 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 196
Target Start/End: Complemental strand, 60641 - 60479
Alignment:
Q  35 cagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaaac 134  Q
    |||||||||| || ||||||||||| ||||| ||| | |||  ||| | |||||||||||||  ||   ||||||| ||||||||||||||| |||||||    
T  60641 cagcttcacagattatcattaatatcatatacaatctccattcctaccccaaggttcaactcataacatctcgtgcgacaaagatcacaaaaccctaaac 60542  T
Q  135 aa-gtaatctttaaataggtcactcgcgaggcgagagactctgtttgccatggctagttcagg 196  Q
    || ||| ||| ||| | ||  |||||||||||||||| ||||  | || ||||| ||||||||    
T  60541 aatgtattctgtaactgggaaactcgcgaggcgagagcctctactcgctatggcgagttcagg 60479  T

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Target: scaffold0540 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 228
Target Start/End: Complemental strand, 824 - 747
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatcttt 228  Q
    |||||||||||||||||||| ||| | |  || |||| ||||||||||||||| |||||  |||||||||||||||||    
T  824 ggtcactcgcgaggcgagagcctccgctcaccgtggcgagttcaggtcagatttccaaaagttcattctacaatcttt 747  T

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Target: scaffold0026 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 230
Target Start/End: Original strand, 40164 - 40245
Alignment:
Q  149 taggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttcc 230  Q
    |||||||| ||||||||||||| ||||| | ||| |||| ||| ||||| |||  || ||||||||||||||||||||||||    
T  40164 taggtcacccgcgaggcgagagcctctgctcgccgtggcgagtacaggttagaaaccaaaagtttcattctacaatctttcc 40245  T

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Target: scaffold0026; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 230
Target Start/End: Original strand, 26575 - 26614
Alignment:
Q  191 ttcaggtcagattcccaaagtttcattctacaatctttcc 230  Q
    ||||||||||| ||| ||||||||||||||||||||||||    
T  26575 ttcaggtcagaatccaaaagtttcattctacaatctttcc 26614  T

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Target: scaffold0761 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 4475 - 4531
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataact 79  Q
    ||||||| ||| |||||||||| ||||||| || |||||||||||||||||||||||    
T  4475 atcatcagaaatcagcttcacagatcatcaatagtattatatataatattcataact 4531  T

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Target: scaffold0165 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 3790 - 3858
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattc 218  Q
    ||||||||||||| |||||| ||||| | |||||||| ||||||||||||| ||||| |||||||||||    
T  3790 ggtcactcgcgagacgagagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttcattc 3858  T

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Target: scaffold0165; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 7854 - 7922
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattc 218  Q
    ||||||||||||| |||||| ||||| | |||||||| ||||||||||||| ||||| |||||||||||    
T  7854 ggtcactcgcgagacgagagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttcattc 7922  T

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Target: scaffold0145 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 39070 - 39137
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattc 218  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||| |||  |||||||||||    
T  39070 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccacaagtttcattc 39137  T

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Target: scaffold1842 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 861 - 791
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattcta 220  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||| ||||| |||||||| ||||    
T  861 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcaatcta 791  T

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Target: scaffold0193 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 218
Target Start/End: Original strand, 13518 - 13588
Alignment:
Q  149 taggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattc 218  Q
    |||||||||||||||||||||| ||||| | ||| |||| ||||||||||||| | ||| |||||||||||    
T  13518 taggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatgccacaagtttcattc 13588  T

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Target: scaffold0358 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 207
Target Start/End: Original strand, 245 - 301
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca 207  Q
    ||||||| |||||||||||| ||||| | |||||||| ||||||||||||| |||||    
T  245 ggtcacttgcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatccca 301  T

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Target: scaffold0358; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 207
Target Start/End: Original strand, 5021 - 5077
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca 207  Q
    ||||||| |||||||||||| ||||| | |||||||| ||||||||||||| |||||    
T  5021 ggtcacttgcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatccca 5077  T

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Target: scaffold0130 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 28140 - 28219
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcag-attcccaaagtttcattctacaatctttcc 230  Q
    |||||||||||||||||||| || || | ||| |||| |||||||||||| ||||  |||||||||||||| |||||||||    
T  28140 ggtcactcgcgaggcgagagcctttgctcgccgtggcgagttcaggtcagaattcaaaaagtttcattcta-aatctttcc 28219  T

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Target: scaffold0121 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 8344 - 8264
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcaga-ttcccaaagtttcattctacaatctttcc 230  Q
    |||||||||||||||||||| ||||  |  || |||| |||| ||| |||| |||| ||||||||||||||||||||||||    
T  8344 ggtcactcgcgaggcgagagcctctactcaccgtggcgagtttaggccagaattccaaaagtttcattctacaatctttcc 8264  T

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Target: scaffold0034 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 51696 - 51616
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttcc 230  Q
    ||||||| |||||| ||||| ||||| | ||| |||| ||||||||||| | ||||| ||||||||||| |||||||||||    
T  51696 ggtcactagcgaggtgagagcctctgctcgccgtggcgagttcaggtcaaaatcccacaagtttcattcgacaatctttcc 51616  T

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Target: scaffold1984 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 440 - 519
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattcccaaagtttcattctacaatctttcc 230  Q
    |||||||||||||||||||| ||||| | |||||||| |||||||||   | || ||||  ||||||||| |||||||||    
T  440 ggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtgcaactcacaaaaattcattctaaaatctttcc 519  T

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Target: scaffold0639 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 229
Target Start/End: Original strand, 8784 - 8863
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca-aagtttcattctacaatctttc 229  Q
    ||||| |||||||||||||| ||||  | ||| |||| ||||||||||||| ||||| ||||| |||| |||||||||||    
T  8784 ggtcattcgcgaggcgagagcctctactggccgtggcgagttcaggtcagaatcccacaagttccattttacaatctttc 8863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 200
Target Start/End: Original strand, 2259 - 2310
Alignment:
Q  149 taggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcag 200  Q
    |||||||||||||||||||||| ||||| | ||| |||| ||||||||||||    
T  2259 taggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcag 2310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 2108 - 2066
Alignment:
Q  155 actcgcgaggcgagagactctgtttgccatggctagttcaggt 197  Q
    |||||||||||||||| ||||| |||||||||| |||||||||    
T  2108 actcgcgaggcgagagcctctgcttgccatggcgagttcaggt 2066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 220
Target Start/End: Complemental strand, 12611 - 12550
Alignment:
Q  159 gcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattcta 220  Q
    |||||||||||| ||||| | |||||||| |||||| ||||||||| ||||||||||||||||    
T  12611 gcgaggcgagagcctctgctcgccatggcgagttca-gtcagattctccaaagtttcattcta 12550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 12748 - 12675
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactc 96  Q
    ||||||||| | || ||||||| |||||||||||||| ||||||| |  |||| ||||||  ||||||||||||    
T  12748 atcatcatataacaacttcacagatcatcattaatatcatatatattcctcattactatcctaaggttcaactc 12675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 132
Target Start/End: Original strand, 16320 - 16378
Alignment:
Q  74 ataactatctcaaggttcaactctcaaagactcgtgctacaaagatcacaaaatcctaa 132  Q
    ||||||| |||||||||||||||||||  |||||||| |||||| || ||||| |||||    
T  16320 ataactacctcaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaa 16378  T

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Target: scaffold0461 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 68
Target Start/End: Original strand, 11659 - 11692
Alignment:
Q  35 cagcttcacatatcatcattaatattatatataa 68  Q
    |||||||||| |||||||||||||||||||||||    
T  11659 cagcttcacagatcatcattaatattatatataa 11692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 776 - 704
Alignment:
Q  149 taggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca--aagtttcattct 219  Q
    |||||||||| ||||||| ||  ||||| | |||||||| ||||||||||||||| |||  ||||||||||||    
T  776 taggtcactcacgaggcgggaacctctgctcgccatggcgagttcaggtcagatttccaacaagtttcattct 704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 344 - 408
Alignment:
Q  156 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattcta 220  Q
    ||||||||||||||| ||||| | |||||||| |||||| ||||||||| |||||||| |||||||    
T  344 ctcgcgaggcgagagcctctgctcgccatggcgagttca-gtcagattctccaaagttccattcta 408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 200
Target Start/End: Original strand, 6919 - 6968
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcag 200  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||||||||||    
T  6919 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcag 6968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 10226 - 10290
Alignment:
Q  156 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattcta 220  Q
    ||||||||||||||| ||||| | |||||||| |||||| ||||||||| |||||||||| |||||    
T  10226 ctcgcgaggcgagagcctctgctcgccatggcgagttca-gtcagattctccaaagtttccttcta 10290  T

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Target: scaffold0124 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 24456 - 24392
Alignment:
Q  156 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagatt-cccaaagtttcattcta 220  Q
    ||||||||||||||| ||||| | |||||||| |||||| ||||||||  ||||||||||||||||    
T  24456 ctcgcgaggcgagagcctctgctcgccatggcgagttca-gtcagattatccaaagtttcattcta 24392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 80137 - 80073
Alignment:
Q  156 ctcgcgaggcgagagactctgtttgccatggctagttcaggtcagattc-ccaaagtttcattcta 220  Q
    ||||||||||||||| ||||| | |||||| | |||||| ||||||||| ||||||||||||||||    
T  80137 ctcgcgaggcgagagcctctgctcgccatgtcgagttca-gtcagattctccaaagtttcattcta 80073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 80272 - 80199
Alignment:
Q  23 atcatcataaagcagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactc 96  Q
    ||||||||| | || ||||||| |||||||||||||| || |||| |  |||| |||||| |||||||||||||    
T  80272 atcatcatataacaacttcacaaatcatcattaatatcatgtatattcctcattactatcccaaggttcaactc 80199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 10238 - 10182
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca 207  Q
    |||||||||||||||||||| ||||| |  || |||| ||||||||||||| |||||    
T  10238 ggtcactcgcgaggcgagagcctctgctccccgtggcgagttcaggtcagaatccca 10182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 123
Target Start/End: Original strand, 25300 - 25388
Alignment:
Q  35 cagcttcacatatcatcattaatattatatataatattcataactatctcaaggttcaactctcaaagactcgtgctacaaagatcaca 123  Q
    |||||||||| |||||||||||||||||||  ||  |||||  ||| | ||||| ||||||| |||  |||||||| |||||| |||||    
T  25300 cagcttcacagatcatcattaatattatattcaaccttcatttctaccccaaggatcaactcacaacaactcgtgcgacaaaggtcaca 25388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 207
Target Start/End: Original strand, 32373 - 32429
Alignment:
Q  151 ggtcactcgcgaggcgagagactctgtttgccatggctagttcaggtcagattccca 207  Q
    |||||||||||||||||||| ||||| | ||| |||| |||||| |||||| |||||    
T  32373 ggtcactcgcgaggcgagagcctctgctcgccgtggcaagttcaagtcagaatccca 32429  T

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Target: scaffold0028 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 132967 - 133042
Alignment:
Q  155 actcgcgaggcgagagactctgtttgccatggctagttcagg-tcagattcccaaagtttcattctacaatctttcc 230  Q
    |||||||||||||||| ||||| | |||||||| |||||||| |||| ||| |||| |||||||||| | |||||||    
T  132967 actcgcgaggcgagagcctctgctcgccatggcgagttcaggttcag-ttcacaaaatttcattctaaagtctttcc 133042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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