View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0055_low_4 (Length: 295)

Name: NF0055_low_4
Description: NF0055
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0055_low_4
NF0055_low_4
[»] scaffold0026 (3 HSPs)
scaffold0026 (86-205)||(8164-8285)
scaffold0026 (86-205)||(60283-60404)
scaffold0026 (86-205)||(115788-115908)
[»] chr5 (32 HSPs)
chr5 (82-205)||(26784605-26784730)
chr5 (96-205)||(21910790-21910901)
chr5 (86-205)||(17815231-17815352)
chr5 (82-181)||(6512212-6512313)
chr5 (86-205)||(89205-89325)
chr5 (86-173)||(21072009-21072096)
chr5 (86-173)||(23412759-23412846)
chr5 (113-209)||(14086332-14086429)
chr5 (86-173)||(23881363-23881450)
chr5 (113-205)||(4887271-4887365)
chr5 (113-201)||(5430137-5430226)
chr5 (86-173)||(7745415-7745502)
chr5 (113-201)||(31118129-31118218)
chr5 (86-173)||(20551159-20551247)
chr5 (113-166)||(33022953-33023006)
chr5 (113-168)||(23478676-23478732)
chr5 (113-168)||(33933605-33933661)
chr5 (125-205)||(19536093-19536174)
chr5 (129-204)||(41566243-41566319)
chr5 (136-205)||(29138210-29138281)
chr5 (86-173)||(6499518-6499606)
chr5 (82-168)||(42244000-42244087)
chr5 (108-173)||(12352608-12352674)
chr5 (124-205)||(642499-642580)
chr5 (133-205)||(9398559-9398631)
chr5 (125-168)||(11994217-11994261)
chr5 (133-205)||(21099505-21099577)
chr5 (136-168)||(26759483-26759515)
chr5 (113-143)||(1915740-1915770)
chr5 (113-143)||(40032536-40032566)
chr5 (113-143)||(40228999-40229029)
chr5 (113-168)||(30743314-30743370)
[»] chr4 (37 HSPs)
chr4 (82-205)||(9141124-9141249)
chr4 (86-209)||(12601358-12601483)
chr4 (86-205)||(19620821-19620941)
chr4 (82-205)||(29680283-29680407)
chr4 (86-171)||(3395923-3396008)
chr4 (113-209)||(10073181-10073278)
chr4 (86-205)||(16632701-16632821)
chr4 (86-203)||(14833656-14833775)
chr4 (86-205)||(37435250-37435370)
chr4 (86-171)||(14904048-14904133)
chr4 (105-205)||(14604655-14604756)
chr4 (113-205)||(45833657-45833751)
chr4 (113-201)||(13575900-13575989)
chr4 (113-201)||(54680164-54680253)
chr4 (105-205)||(56034821-56034922)
chr4 (82-171)||(3497931-3498020)
chr4 (90-173)||(55380538-55380621)
chr4 (82-168)||(16853780-16853866)
chr4 (86-159)||(23750755-23750827)
chr4 (86-154)||(12810923-12810991)
chr4 (85-136)||(19911667-19911718)
chr4 (113-200)||(22675306-22675394)
chr4 (82-168)||(55732095-55732181)
chr4 (104-168)||(17540719-17540783)
chr4 (86-173)||(40846378-40846466)
chr4 (113-168)||(3793391-3793446)
chr4 (113-204)||(29121637-29121730)
chr4 (125-168)||(8105971-8106015)
chr4 (113-186)||(19884969-19885046)
chr4 (113-147)||(33378757-33378791)
chr4 (125-168)||(10693153-10693197)
chr4 (125-168)||(10906919-10906963)
chr4 (112-168)||(17787792-17787848)
chr4 (113-163)||(17247565-17247616)
chr4 (104-154)||(11901530-11901580)
chr4 (136-205)||(3105230-3105301)
chr4 (113-141)||(17993519-17993547)
[»] chr7 (56 HSPs)
chr7 (86-205)||(13648963-13649084)
chr7 (82-205)||(13692605-13692730)
chr7 (86-205)||(2913394-2913515)
chr7 (86-209)||(29935151-29935273)
chr7 (86-205)||(11319670-11319790)
chr7 (86-202)||(10882946-10883063)
chr7 (87-205)||(13880369-13880488)
chr7 (86-205)||(2500289-2500410)
chr7 (86-205)||(13137697-13137817)
chr7 (86-209)||(13260397-13260522)
chr7 (86-195)||(48800414-48800524)
chr7 (86-173)||(13303119-13303206)
chr7 (86-173)||(13730483-13730569)
chr7 (86-173)||(16316349-16316436)
chr7 (105-201)||(33691518-33691615)
chr7 (86-205)||(12366523-12366643)
chr7 (86-205)||(30026156-30026276)
chr7 (86-173)||(11793205-11793292)
chr7 (104-173)||(15088787-15088856)
chr7 (113-201)||(9709633-9709722)
chr7 (113-201)||(14426783-14426872)
chr7 (86-173)||(21695668-21695755)
chr7 (86-205)||(44467316-44467435)
chr7 (105-205)||(14193339-14193445)
chr7 (82-201)||(30944126-30944245)
chr7 (82-201)||(30945159-30945278)
chr7 (86-209)||(5000627-5000752)
chr7 (86-205)||(4494739-4494858)
chr7 (86-173)||(13031860-13031946)
chr7 (86-173)||(28409332-28409419)
chr7 (113-168)||(35952471-35952526)
chr7 (86-173)||(13018297-13018383)
chr7 (113-168)||(16111683-16111738)
chr7 (113-168)||(48236734-48236789)
chr7 (86-205)||(22577793-22577916)
chr7 (105-173)||(13880888-13880956)
chr7 (113-186)||(33605970-33606045)
chr7 (113-168)||(12174124-12174179)
chr7 (113-168)||(16542837-16542891)
chr7 (113-168)||(16622771-16622825)
chr7 (114-173)||(24788391-24788450)
chr7 (113-168)||(28622166-28622221)
chr7 (103-209)||(9098035-9098141)
chr7 (86-152)||(23279813-23279879)
chr7 (106-167)||(331955-332015)
chr7 (113-199)||(7339683-7339770)
chr7 (86-173)||(41842079-41842167)
chr7 (101-168)||(13890734-13890801)
chr7 (113-166)||(19710799-19710853)
chr7 (113-157)||(15469781-15469825)
chr7 (113-143)||(8998678-8998708)
chr7 (113-143)||(11086804-11086834)
chr7 (114-167)||(21692542-21692595)
chr7 (140-168)||(16556576-16556604)
chr7 (140-168)||(16609058-16609086)
chr7 (133-173)||(39284416-39284456)
[»] chr2 (49 HSPs)
chr2 (86-205)||(25829366-25829487)
chr2 (96-205)||(22260667-22260778)
chr2 (86-205)||(20568466-20568587)
chr2 (86-199)||(38631222-38631337)
chr2 (87-173)||(25036986-25037072)
chr2 (87-173)||(25041093-25041179)
chr2 (86-205)||(30667252-30667372)
chr2 (86-205)||(19540662-19540781)
chr2 (86-205)||(24850383-24850502)
chr2 (86-168)||(18376654-18376736)
chr2 (86-205)||(23235270-23235390)
chr2 (87-205)||(30621450-30621569)
chr2 (87-205)||(30624071-30624190)
chr2 (82-205)||(28140346-28140473)
chr2 (86-205)||(9015088-9015208)
chr2 (105-171)||(22317910-22317976)
chr2 (86-173)||(22187836-22187923)
chr2 (86-173)||(24377366-24377452)
chr2 (86-205)||(40782732-40782854)
chr2 (86-205)||(24576312-24576432)
chr2 (113-198)||(20151794-20151880)
chr2 (86-173)||(21536966-21537053)
chr2 (105-172)||(38781677-38781744)
chr2 (113-201)||(28711456-28711546)
chr2 (86-149)||(13963727-13963790)
chr2 (127-168)||(30557046-30557087)
chr2 (86-173)||(10009484-10009572)
chr2 (104-168)||(19115425-19115489)
chr2 (113-168)||(28700955-28701011)
chr2 (125-168)||(6392937-6392980)
chr2 (82-168)||(45086847-45086934)
chr2 (113-199)||(31800629-31800717)
chr2 (104-173)||(39037391-39037461)
chr2 (113-168)||(6573882-6573937)
chr2 (104-155)||(20569773-20569824)
chr2 (113-168)||(24793729-24793784)
chr2 (113-168)||(24814304-24814359)
chr2 (113-168)||(26618851-26618906)
chr2 (104-205)||(22272393-22272494)
chr2 (113-168)||(1084362-1084418)
chr2 (104-168)||(18703073-18703137)
chr2 (82-168)||(22802775-22802862)
chr2 (82-168)||(31327668-31327755)
chr2 (82-168)||(31334389-31334476)
chr2 (174-205)||(38631198-38631229)
chr2 (104-154)||(24440500-24440550)
chr2 (133-173)||(23184111-23184151)
chr2 (113-145)||(23392418-23392450)
chr2 (133-173)||(23595368-23595408)
[»] scaffold0426 (1 HSPs)
scaffold0426 (86-209)||(13875-14000)
[»] chr8 (51 HSPs)
chr8 (86-205)||(19156443-19156563)
chr8 (90-205)||(17267732-17267848)
chr8 (86-205)||(17441593-17441713)
chr8 (86-205)||(18120894-18121014)
chr8 (86-205)||(20255338-20255458)
chr8 (86-205)||(16681076-16681195)
chr8 (86-205)||(20382166-20382286)
chr8 (96-205)||(29693576-29693688)
chr8 (86-205)||(602505-602624)
chr8 (86-205)||(39693796-39693916)
chr8 (86-173)||(16189293-16189380)
chr8 (86-173)||(17914753-17914840)
chr8 (86-173)||(22745764-22745851)
chr8 (105-171)||(21933197-21933263)
chr8 (86-203)||(17525500-17525617)
chr8 (82-205)||(18680060-18680184)
chr8 (86-173)||(17702020-17702107)
chr8 (86-173)||(18320961-18321048)
chr8 (124-205)||(33083116-33083199)
chr8 (113-166)||(30421239-30421292)
chr8 (105-167)||(16207555-16207617)
chr8 (104-205)||(19943498-19943600)
chr8 (82-170)||(18719263-18719352)
chr8 (113-168)||(21541287-21541343)
chr8 (104-168)||(22461418-22461482)
chr8 (82-168)||(15335807-15335894)
chr8 (82-168)||(15424872-15424959)
chr8 (82-168)||(15516176-15516263)
chr8 (113-168)||(23185039-23185094)
chr8 (82-168)||(24832820-24832907)
chr8 (104-205)||(19707764-19707865)
chr8 (113-168)||(1237967-1238023)
chr8 (120-205)||(2811083-2811168)
chr8 (113-168)||(9320885-9320941)
chr8 (113-168)||(45538251-45538307)
chr8 (86-173)||(24646631-24646718)
chr8 (113-168)||(19927344-19927400)
chr8 (113-168)||(28903780-28903836)
chr8 (113-168)||(40003506-40003562)
chr8 (136-199)||(14989277-14989343)
chr8 (107-205)||(19956142-19956241)
chr8 (113-143)||(17518842-17518872)
chr8 (104-173)||(18722419-18722489)
chr8 (105-147)||(23263389-23263431)
chr8 (112-154)||(23772680-23772722)
chr8 (113-168)||(3598126-3598182)
chr8 (113-141)||(8032357-8032385)
chr8 (113-141)||(18534847-18534875)
chr8 (125-173)||(18685221-18685269)
chr8 (125-173)||(18730786-18730834)
chr8 (112-168)||(18772927-18772983)
[»] chr3 (55 HSPs)
chr3 (82-205)||(20646423-20646547)
chr3 (86-209)||(41495238-41495362)
chr3 (86-205)||(17238725-17238844)
chr3 (86-205)||(13948604-13948724)
chr3 (86-205)||(14392777-14392897)
chr3 (86-205)||(15903467-15903587)
chr3 (82-205)||(16658408-16658538)
chr3 (113-205)||(47405249-47405343)
chr3 (86-205)||(31303657-31303777)
chr3 (86-173)||(12962872-12962959)
chr3 (86-173)||(49642550-49642637)
chr3 (105-205)||(52920673-52920774)
chr3 (86-173)||(22803872-22803959)
chr3 (86-205)||(37467570-37467690)
chr3 (113-205)||(14969581-14969675)
chr3 (105-201)||(28582379-28582476)
chr3 (113-199)||(47207984-47208071)
chr3 (105-197)||(18121411-18121504)
chr3 (105-205)||(13824300-13824403)
chr3 (82-168)||(50300524-50300610)
chr3 (113-166)||(20627277-20627330)
chr3 (86-173)||(6091033-6091120)
chr3 (125-201)||(11223819-11223896)
chr3 (86-173)||(16032781-16032868)
chr3 (128-201)||(2561446-2561520)
chr3 (113-173)||(40800127-40800187)
chr3 (113-168)||(11869392-11869447)
chr3 (113-168)||(11908763-11908819)
chr3 (86-205)||(29951209-29951329)
chr3 (86-205)||(30000363-30000483)
chr3 (113-201)||(53056525-53056615)
chr3 (86-168)||(24775269-24775354)
chr3 (86-167)||(49553259-49553341)
chr3 (104-205)||(16199601-16199702)
chr3 (113-168)||(12752399-12752455)
chr3 (112-168)||(26417488-26417544)
chr3 (113-168)||(29855732-29855788)
chr3 (82-168)||(14955764-14955851)
chr3 (86-171)||(12726034-12726119)
chr3 (104-173)||(19249202-19249271)
chr3 (113-168)||(13148584-13148640)
chr3 (125-168)||(22141049-22141093)
chr3 (117-168)||(22151564-22151616)
chr3 (113-157)||(33583579-33583623)
chr3 (113-157)||(33598199-33598243)
chr3 (113-168)||(46349625-46349681)
chr3 (107-154)||(14073004-14073051)
chr3 (104-154)||(8728815-8728865)
chr3 (104-154)||(9080702-9080752)
chr3 (104-154)||(14077174-14077223)
chr3 (113-166)||(51341357-51341411)
chr3 (113-143)||(51988805-51988835)
chr3 (115-168)||(12388676-12388729)
chr3 (105-154)||(38177479-38177527)
chr3 (104-168)||(12968646-12968709)
[»] chr6 (41 HSPs)
chr6 (86-200)||(19086424-19086539)
chr6 (86-205)||(9718112-9718232)
chr6 (86-205)||(19624231-19624351)
chr6 (86-205)||(24117097-24117217)
chr6 (96-205)||(15302438-15302550)
chr6 (105-205)||(34451463-34451565)
chr6 (86-205)||(12715195-12715315)
chr6 (86-173)||(13602457-13602544)
chr6 (105-205)||(21625366-21625468)
chr6 (86-173)||(25597764-25597851)
chr6 (86-205)||(13435801-13435921)
chr6 (113-199)||(32544543-32544630)
chr6 (89-209)||(23284829-23284949)
chr6 (86-173)||(15987496-15987583)
chr6 (86-173)||(18378555-18378642)
chr6 (113-200)||(21235371-21235459)
chr6 (107-205)||(15531404-15531504)
chr6 (86-158)||(18383955-18384027)
chr6 (113-198)||(18435850-18435936)
chr6 (86-170)||(19689021-19689105)
chr6 (86-173)||(14100233-14100320)
chr6 (86-173)||(20112474-20112561)
chr6 (105-171)||(26971989-26972055)
chr6 (114-201)||(16264954-16265042)
chr6 (113-200)||(20730507-20730595)
chr6 (113-168)||(139154-139209)
chr6 (113-168)||(147175-147230)
chr6 (113-200)||(22802399-22802487)
chr6 (113-201)||(15954960-15955050)
chr6 (82-168)||(16877521-16877608)
chr6 (113-168)||(20487688-20487743)
chr6 (116-173)||(3680778-3680835)
chr6 (136-209)||(33351754-33351829)
chr6 (113-168)||(17381737-17381793)
chr6 (113-168)||(17608106-17608162)
chr6 (113-198)||(29918277-29918365)
chr6 (136-168)||(19832811-19832843)
chr6 (107-154)||(25592839-25592886)
chr6 (113-143)||(21128564-21128594)
chr6 (112-154)||(23298261-23298303)
chr6 (136-171)||(22058391-22058427)
[»] scaffold0084 (2 HSPs)
scaffold0084 (86-205)||(32740-32861)
scaffold0084 (86-205)||(49586-49706)
[»] chr1 (47 HSPs)
chr1 (86-205)||(33256044-33256165)
chr1 (86-205)||(33276216-33276337)
chr1 (86-199)||(1900607-1900721)
chr1 (86-199)||(20954146-20954261)
chr1 (86-173)||(1578134-1578221)
chr1 (105-209)||(36134437-36134543)
chr1 (105-205)||(16235022-16235124)
chr1 (86-173)||(19717806-19717893)
chr1 (113-205)||(22599900-22599994)
chr1 (86-187)||(38282868-38282971)
chr1 (86-173)||(28492127-28492214)
chr1 (105-205)||(2268795-2268897)
chr1 (86-200)||(22154147-22154262)
chr1 (86-173)||(10757706-10757792)
chr1 (86-173)||(48704501-48704588)
chr1 (82-205)||(30893330-30893455)
chr1 (104-205)||(7310071-7310171)
chr1 (113-187)||(29216068-29216144)
chr1 (82-168)||(25448220-25448307)
chr1 (105-168)||(32785663-32785726)
chr1 (114-209)||(22427078-22427174)
chr1 (86-205)||(12284707-12284828)
chr1 (113-168)||(39200743-39200798)
chr1 (82-199)||(2834964-2835083)
chr1 (113-168)||(2327126-2327182)
chr1 (105-205)||(21191591-21191691)
chr1 (113-158)||(22464510-22464555)
chr1 (139-205)||(23036273-23036341)
chr1 (139-205)||(35402075-35402143)
chr1 (104-168)||(17024692-17024756)
chr1 (104-168)||(18896298-18896362)
chr1 (113-167)||(19170063-19170119)
chr1 (113-168)||(2267362-2267417)
chr1 (113-168)||(26547963-26548019)
chr1 (174-205)||(20954254-20954285)
chr1 (104-154)||(20109685-20109735)
chr1 (113-143)||(22019680-22019710)
chr1 (175-205)||(22201564-22201594)
chr1 (113-143)||(22655822-22655852)
chr1 (113-143)||(23065278-23065308)
chr1 (112-154)||(24227706-24227748)
chr1 (113-143)||(28380338-28380368)
chr1 (113-147)||(35402146-35402180)
chr1 (136-205)||(21204672-21204743)
chr1 (136-205)||(30572433-30572505)
chr1 (144-201)||(35040422-35040480)
chr1 (113-141)||(52350426-52350454)
[»] scaffold0146 (1 HSPs)
scaffold0146 (86-205)||(15355-15474)
[»] scaffold0861 (1 HSPs)
scaffold0861 (86-209)||(4669-4793)
[»] scaffold0290 (1 HSPs)
scaffold0290 (86-205)||(18343-18463)
[»] scaffold0243 (1 HSPs)
scaffold0243 (90-173)||(4736-4819)
[»] scaffold0771 (1 HSPs)
scaffold0771 (86-205)||(744-864)
[»] scaffold0065 (1 HSPs)
scaffold0065 (87-205)||(1972-2091)
[»] scaffold0022 (3 HSPs)
scaffold0022 (86-200)||(39685-39800)
scaffold0022 (86-200)||(137745-137860)
scaffold0022 (104-167)||(159375-159438)
[»] scaffold0083 (1 HSPs)
scaffold0083 (86-173)||(25714-25801)
[»] scaffold0337 (1 HSPs)
scaffold0337 (87-173)||(14963-15049)
[»] scaffold0210 (1 HSPs)
scaffold0210 (104-205)||(1898-2001)
[»] scaffold0047 (1 HSPs)
scaffold0047 (86-203)||(30490-30609)
[»] scaffold0005 (2 HSPs)
scaffold0005 (86-203)||(5924-6043)
scaffold0005 (105-205)||(212622-212723)
[»] scaffold0004 (4 HSPs)
scaffold0004 (86-169)||(377298-377381)
scaffold0004 (82-168)||(30589-30675)
scaffold0004 (104-168)||(243994-244058)
scaffold0004 (104-205)||(220506-220608)
[»] scaffold0003 (1 HSPs)
scaffold0003 (113-201)||(89820-89909)
[»] scaffold1434 (1 HSPs)
scaffold1434 (130-205)||(553-630)
[»] scaffold0116 (1 HSPs)
scaffold0116 (86-205)||(20693-20813)
[»] scaffold0035 (1 HSPs)
scaffold0035 (86-203)||(19196-19314)
[»] scaffold0261 (1 HSPs)
scaffold0261 (86-173)||(5676-5763)
[»] scaffold0171 (1 HSPs)
scaffold0171 (104-205)||(27185-27287)
[»] scaffold1359 (1 HSPs)
scaffold1359 (113-201)||(437-526)
[»] scaffold0359 (1 HSPs)
scaffold0359 (86-205)||(5413-5534)
[»] scaffold0066 (1 HSPs)
scaffold0066 (86-173)||(60607-60694)
[»] scaffold0023 (1 HSPs)
scaffold0023 (105-205)||(103824-103926)
[»] scaffold0334 (1 HSPs)
scaffold0334 (86-205)||(10062-10182)
[»] scaffold0007 (1 HSPs)
scaffold0007 (105-199)||(143365-143460)
[»] scaffold0251 (1 HSPs)
scaffold0251 (105-186)||(7976-8059)
[»] scaffold0193 (1 HSPs)
scaffold0193 (86-205)||(16047-16170)
[»] scaffold0485 (1 HSPs)
scaffold0485 (86-173)||(9099-9185)
[»] scaffold0217 (1 HSPs)
scaffold0217 (105-168)||(19341-19404)
[»] scaffold0411 (1 HSPs)
scaffold0411 (86-197)||(12486-12599)
[»] scaffold0227 (1 HSPs)
scaffold0227 (113-171)||(22964-23022)
[»] scaffold0161 (1 HSPs)
scaffold0161 (107-205)||(9880-9978)
[»] scaffold0364 (1 HSPs)
scaffold0364 (104-205)||(6259-6360)
[»] scaffold0479 (1 HSPs)
scaffold0479 (86-173)||(10238-10325)
[»] scaffold0452 (1 HSPs)
scaffold0452 (82-168)||(1585-1672)
[»] scaffold0395 (1 HSPs)
scaffold0395 (86-173)||(13256-13343)
[»] scaffold0120 (2 HSPs)
scaffold0120 (86-173)||(36498-36585)
scaffold0120 (86-173)||(42420-42507)
[»] scaffold1331 (1 HSPs)
scaffold1331 (82-168)||(328-414)
[»] scaffold0439 (1 HSPs)
scaffold0439 (113-168)||(6457-6513)
[»] scaffold0012 (1 HSPs)
scaffold0012 (113-168)||(215229-215285)
[»] scaffold0050 (1 HSPs)
scaffold0050 (113-167)||(35512-35567)
[»] scaffold0297 (1 HSPs)
scaffold0297 (109-147)||(17318-17356)
[»] scaffold0081 (1 HSPs)
scaffold0081 (103-173)||(40946-41016)
[»] scaffold0908 (1 HSPs)
scaffold0908 (113-168)||(3619-3675)
[»] scaffold0422 (1 HSPs)
scaffold0422 (113-168)||(12055-12111)
[»] scaffold0269 (1 HSPs)
scaffold0269 (113-168)||(7615-7671)
[»] scaffold0043 (1 HSPs)
scaffold0043 (113-168)||(78113-78169)
[»] scaffold0028 (1 HSPs)
scaffold0028 (113-168)||(5334-5390)
[»] scaffold0247 (1 HSPs)
scaffold0247 (136-203)||(23350-23419)
[»] scaffold0018 (3 HSPs)
scaffold0018 (113-168)||(6248-6303)
scaffold0018 (86-125)||(52855-52894)
scaffold0018 (86-125)||(56807-56846)
[»] scaffold1321 (1 HSPs)
scaffold1321 (117-168)||(664-716)
[»] scaffold1263 (1 HSPs)
scaffold1263 (117-168)||(857-909)
[»] scaffold0655 (1 HSPs)
scaffold0655 (113-168)||(5436-5492)
[»] scaffold0280 (1 HSPs)
scaffold0280 (113-168)||(17534-17590)
[»] scaffold0185 (1 HSPs)
scaffold0185 (113-168)||(9623-9679)
[»] scaffold0002 (2 HSPs)
scaffold0002 (113-168)||(156362-156418)
scaffold0002 (113-141)||(481521-481549)
[»] scaffold0025 (1 HSPs)
scaffold0025 (104-173)||(74865-74934)
[»] scaffold0527 (2 HSPs)
scaffold0527 (136-168)||(177-209)
scaffold0527 (136-168)||(8240-8272)
[»] scaffold0324 (1 HSPs)
scaffold0324 (133-173)||(10239-10279)


Alignment Details
Target: scaffold0026 (Bit Score: 99; Significance: 7e-49; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 8285 - 8164
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||  ||||||||||    
T  8285 aaaatttgatatcattattaggttctggaagaacaaaagagagcaaaggaatcaacaaaaagtaagcttaaggcgtctgaagagaagtgctcctgaagac 8186  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
    ||||||||||||||||||||||    
T  8185 aaaagtgctcctgaagtgatga 8164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 60404 - 60283
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagac 183  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||  | || |||||||    
T  60404 aaaatttgacatcattattaggttctggaagaacaaaagagagcaaaggaatcaacaaaaatgaagcttaaggcgtctgaagagaaatgctcttgaagac 60305  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
    |||||||||||||| |||||||    
T  60304 aaaagtgctcctgatgtgatga 60283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 115908 - 115788
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    |||||||||||||||||||||||||| |||||| ||||||||||  | ||||||||||||||||||||  |||  ||| |||||| ||  |||||||| |    
T  115908 aaaatttgatatcattattaggttctcgaagaataaaagagagctgacgaatcaacaaaaaggaagctagaagaatctaaagagatgttctcctgaagtc 115809  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
     |||||||||||||||||||||    
T  115808 -aaagtgctcctgaagtgatga 115788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 7e-49; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 82 - 205
Target Start/End: Complemental strand, 26784730 - 26784605
Alignment:
Q  82 agacaaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctga 179  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  26784730 agacaaaacttgatatcattattaggctcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagtgctcctga 26784631  T
Q  180 agacaaaagtgctcctgaagtgatga 205  Q
    |||||||||||||| |||||| ||||    
T  26784630 agacaaaagtgctcatgaagtcatga 26784605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 96 - 205
Target Start/End: Complemental strand, 21910901 - 21910790
Alignment:
Q  96 atcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagacaaaagtgctc 193  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  21910901 atcattattaggttctagaagaacaaaagagagcaaatgaatcaacaaaaaggaagcttaaagcgtctgaagagaagtgctcctgaagacaaaagtgctc 21910802  T
Q  194 ctgaagtgatga 205  Q
     |||||||||||    
T  21910801 atgaagtgatga 21910790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 17815352 - 17815231
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||  |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||  ||||||||||    
T  17815352 aaaatttggaatcattattaggttctggaagaacaaaagagagtaaaggaatcaacaaaaaggaagcttaaaacatctgaagagaagtgctcctgaagac 17815253  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
    ||||||||||||||||||||||    
T  17815252 aaaagtgctcctgaagtgatga 17815231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 82 - 181
Target Start/End: Original strand, 6512212 - 6512313
Alignment:
Q  82 agacaaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctga 179  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||  ||||||||    
T  6512212 agacaaaatttgaaatcattattaggttcttgaagaacaaaagatagcaaatgaatcaacaaaaaggaagcttaaggcgtctgaagagaaatgttcctga 6512311  T
Q  180 ag 181  Q
    ||    
T  6512312 ag 6512313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 86 - 205
Target Start/End: Original strand, 89205 - 89325
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||  | |||||| |    
T  89205 aaaatttgatatctttattaggttctggaagaacaaaagagagctaaggaatcaacaaaaaggaagcttgaagtgtctgaagagaagtgcttctgaagtc 89304  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
     |||||||| ||||||||||||    
T  89305 -aaagtgctactgaagtgatga 89325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 86 - 173
Target Start/End: Original strand, 21072009 - 21072096
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||||||| ||||||||||||  |||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  21072009 aaaatttgatatctttattaggttctgaaagaacaaaaaagagctaaggaatcaacaaaaaggaagcttgaagcgtctgaagagaagt 21072096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 86 - 173
Target Start/End: Original strand, 23412759 - 23412846
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||||||| |||||||||||| ||||| ||||||||||||| |||||||||||||||||||||| |||| |||||||||||||    
T  23412759 aaaatttgatatctttattaggttctggaagagcaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaagagaagt 23412846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 14086332 - 14086429
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaagtgatgatgtc 209  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||| |||||| ||  | |||||||||| |||||||||||||||||||||||||    
T  14086332 gaagaacaataaagagcaaaggaatcaacaaaaaggaagcttaaagcgtatgaagaaaactgctcctgaagac-aaagtgctcctgaagtgatgatgtc 14086429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 23881450 - 23881363
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||||||| |||||||||||| ||||||||||||| ||||| ||||||||||| || ||||||| ||||||||||||| ||||    
T  23881450 aaaatttgatatctttattaggttctagaagaacaaaagatagcaatggaatcaacaagaatgaagcttgaagcgtctgaagaaaagt 23881363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 113 - 205
Target Start/End: Complemental strand, 4887365 - 4887271
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaa-ggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaagtgatga 205  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||  |||||| ||||  |||||||||||||||||||||    
T  4887365 gaagaacaatagagagcaaaggaatcaacaaaaagggaagcttaaagcgtctgaagaaaactgttcctaaaga-taaagtgctcctgaagtgatga 4887271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 113 - 201
Target Start/End: Complemental strand, 5430226 - 5430137
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagacaaaagtgctcctgaagtg 201  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||| ||||| ||||  |||||||||| |||||||| ||||||||    
T  5430226 gaagaacaataaagagcaaaggaatcaacaaaaaggaagcttaaagcgtccgaagaaaagtgctcctgaagac-aaagtgcttctgaagtg 5430137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 86 - 173
Target Start/End: Original strand, 7745415 - 7745502
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||| ||| | | ||||||||  ||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||    
T  7745415 aaaatttgacatcttaaataggttctgaaagaacaaaagagagcaaatggatcaacaaaaaggaagcttgaagcgtctgaagagaagt 7745502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 113 - 201
Target Start/End: Complemental strand, 31118218 - 31118129
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagacaaaagtgctcctgaagtg 201  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||||| || |  || ||||||| |||||||||||||||||    
T  31118218 gaagaacaataaagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagaaaactactcatgaagac-aaagtgctcctgaagtg 31118129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 20551247 - 20551159
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaaca-aaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||| ||| | | |||||||| ||||||||||||||||||| |||||||||| |||||||||||| |||| |||||||||||||    
T  20551247 aaaatttgacatcttaaataggttctggaagaacaaaagagagcaatggaatcaacaaaaaaggaagcttgaagcatctgaagagaagt 20551159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 33023006 - 33022953
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaa 166  Q
    |||||||||  |||||||||||||||||||||||||||||||||| ||||||||    
T  33023006 gaagaacaatcgagagcaaaggaatcaacaaaaaggaagcttaaaacgtctgaa 33022953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 23478732 - 23478676
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaag-gaagcttaaagcgtctgaaga 168  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||    
T  23478732 gaagaacaaaagagagcaaaggaatcaacaaaaagagaagcctaaagcatctgaaga 23478676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 33933661 - 33933605
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaag-gaagcttaaagcgtctgaaga 168  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||    
T  33933661 gaagaacaatagagagcaaaggaatcaacaaaaagagaagcttaaatcgtctgaaga 33933605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 205
Target Start/End: Original strand, 19536093 - 19536174
Alignment:
Q  125 agagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagacaaaagtgctcctgaagtgatga 205  Q
    ||||| ||||||||||||||||| |||||| |||| ||| |||||||||  ||||||| || |||||||||||||||||||||    
T  19536093 agagctaaggaatcaacaaaaagaaagcttgaagcatctaaagagaagttctcctgaacac-aaagtgctcctgaagtgatga 19536174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 204
Target Start/End: Original strand, 41566243 - 41566319
Alignment:
Q  129 caaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaagtgatg 204  Q
    |||||||||||||||||| |||| ||||| |||||||||||||  | |||||||||| |||||| |||||||||||||    
T  41566243 caaaggaatcaacaaaaatgaaggttaaaacgtctgaagagaactgctcctgaagac-aaagtgttcctgaagtgatg 41566319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 29138210 - 29138281
Alignment:
Q  136 atcaacaaaaa-ggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaagtgatga 205  Q
    ||||||||||| |||||||||||||||||||||| ||  |||||||||||| |||||||||||| ||||||||    
T  29138210 atcaacaaaaatggaagcttaaagcgtctgaagaaaactgttcctgaagac-aaagtgctcctgtagtgatga 29138281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 6499606 - 6499518
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaa-gagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||||||| |||||||||| |  |||||||||  |||||| | | |||||||||||||||||||| |||| |||||| ||||||    
T  6499606 aaaatttgatatctttattaggttttgaaagaacaaattgagagctatgaaatcaacaaaaaggaagcttgaagcatctgaaaagaagt 6499518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 168
Target Start/End: Complemental strand, 42244087 - 42244000
Alignment:
Q  82 agacaaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaa-ggaagcttaaagcgtctgaaga 168  Q
    ||||||||||||||||| | |  ||||  | ||||||||| | ||||||||| |||||||||||| ||||||||||||||| ||||||    
T  42244087 agacaaaatttgatatcttaaaaaggtattggaagaacaataaagagcaaagaaatcaacaaaaagggaagcttaaagcgtatgaaga 42244000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 173
Target Start/End: Original strand, 12352608 - 12352674
Alignment:
Q  108 ttcttgaagaacaaaa-gagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    |||| ||||||||||  |||||| | |||||||||||||||||||||| |||| |||||||||||||    
T  12352608 ttctggaagaacaaattgagagctatggaatcaacaaaaaggaagcttgaagcatctgaagagaagt 12352674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 205
Target Start/End: Original strand, 642499 - 642580
Alignment:
Q  124 gagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagacaaaagtgctcctgaagtgatga 205  Q
    |||||| | |||||| ||||||||||||||| ||||||||||||| ||||  |||||||| |  ||||||| ||||||||||||    
T  642499 gagagctatggaatcgacaaaaaggaagcttgaagcgtctgaagaaaagtgatcctgaagtc--aagtgcttctgaagtgatga 642580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 205
Target Start/End: Original strand, 9398559 - 9398631
Alignment:
Q  133 ggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagacaaaagtgctcctgaagtgatga 205  Q
    |||||||||||||||||||||| |||| | |||||||||||  | |||||| |  ||||||||||||||||||||    
T  9398559 ggaatcaacaaaaaggaagcttgaagcatttgaagagaagtgctgctgaagtc--aagtgctcctgaagtgatga 9398631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 168
Target Start/End: Complemental strand, 11994261 - 11994217
Alignment:
Q  125 agagcaaaggaatcaacaaaaa-ggaagcttaaagcgtctgaaga 168  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||    
T  11994261 agagcaaaggaatcaacaaaaagggaagcttaaagcatctgaaga 11994217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 205
Target Start/End: Original strand, 21099505 - 21099577
Alignment:
Q  133 ggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagacaaaagtgctcctgaagtgatga 205  Q
    ||||||||||||||||| |||| ||||||||||||| ||||  || ||||| |  ||||||||||||||||||||    
T  21099505 ggaatcaacaaaaaggaggcttgaagcgtctgaagaaaagtgctcatgaagtc--aagtgctcctgaagtgatga 21099577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 168
Target Start/End: Complemental strand, 26759515 - 26759483
Alignment:
Q  136 atcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    |||||||||||||||||||||||||||||||||    
T  26759515 atcaacaaaaaggaagcttaaagcgtctgaaga 26759483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 143
Target Start/End: Complemental strand, 1915770 - 1915740
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaa 143  Q
    |||||||||||||||||||||||||||||||    
T  1915770 gaagaacaaaagagagcaaaggaatcaacaa 1915740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 143
Target Start/End: Original strand, 40032536 - 40032566
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaa 143  Q
    |||||||||||||||||||||||||||||||    
T  40032536 gaagaacaaaagagagcaaaggaatcaacaa 40032566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 143
Target Start/End: Complemental strand, 40229029 - 40228999
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaa 143  Q
    |||||||||||||||||||||||||||||||    
T  40229029 gaagaacaaaagagagcaaaggaatcaacaa 40228999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 30743370 - 30743314
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaa-gcttaaagcgtctgaaga 168  Q
    ||||||||| | ||||||||| | ||| |||||||||| ||||||||||||||||||    
T  30743370 gaagaacaataaagagcaaagaactcagcaaaaaggaaagcttaaagcgtctgaaga 30743314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 7e-49; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 82 - 205
Target Start/End: Complemental strand, 9141249 - 9141124
Alignment:
Q  82 agacaaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctga 179  Q
    ||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||    
T  9141249 agacaaaatttaatatcattattaggttatggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaggcgtctgaagagaagtgctcctga 9141150  T
Q  180 agacaaaagtgctcctgaagtgatga 205  Q
    ||||||||||||||||||||||||||    
T  9141149 agacaaaagtgctcctgaagtgatga 9141124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 86 - 209
Target Start/End: Complemental strand, 12601483 - 12601358
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagac 183  Q
    ||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||  |||||| |||||    
T  12601483 aaaatttggaatcattattaggttctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaggcatctgaagagaagtgttccttaagac 12601384  T
Q  184 aaaagtgctcctgaagtgatgatgtc 209  Q
    ||||||||||||||||||||||||||    
T  12601383 aaaagtgctcctgaagtgatgatgtc 12601358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 86 - 205
Target Start/End: Original strand, 19620821 - 19620941
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||  |||||||| |    
T  19620821 aaaatttgatatctttattaggttctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcatctgaagagacgtgctcctgaagtc 19620920  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
     |||||| ||||||||||||||    
T  19620921 -aaagtgatcctgaagtgatga 19620941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 82 - 205
Target Start/End: Original strand, 29680283 - 29680407
Alignment:
Q  82 agacaaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctga 179  Q
    ||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||  ||||||||    
T  29680283 agacaaaatttggaatcattattaggttctagaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttgaagtatctgaagagaagtgttcctga 29680382  T
Q  180 agacaaaagtgctcctgaagtgatga 205  Q
    || | |||||||||||||||||||||    
T  29680383 agtc-aaagtgctcctgaagtgatga 29680407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 86 - 171
Target Start/End: Complemental strand, 3396008 - 3395923
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa 171  Q
    |||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3396008 aaaagttgagatcattattaggttctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa 3395923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 113 - 209
Target Start/End: Complemental strand, 10073278 - 10073181
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagacaaaagtgctcctgaagtgatgatgtc 209  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||| ||||||||||||||||| |||||||    
T  10073278 gaagaacaatagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagaaaagtgctcctgaagac-aaagtgctcctgaagtggtgatgtc 10073181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 16632821 - 16632701
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||||||| |||||||||||| ||| ||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||  |||| ||| |    
T  16632821 aaaatttgatatctttattaggttctggaaaaacaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctaaagtc 16632722  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
     |||||||| ||||||||||||    
T  16632721 -aaagtgcttctgaagtgatga 16632701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 86 - 203
Target Start/End: Complemental strand, 14833775 - 14833656
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||  ||||||||||||  || ||||||||||||||||||||| ||||||||||||| || ||| |||| ||||||| |||||  ||||||||||    
T  14833775 aaaatttggaatcattattaggacctggaagaacaaaagagagcaaagaaatcaacaaaaagaaaacttgaagcatctgaagcgaagtgctcctgaagac 14833676  T
Q  184 aaaagtgctcctgaagtgat 203  Q
    ||||||||||||||||||||    
T  14833675 aaaagtgctcctgaagtgat 14833656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 86 - 205
Target Start/End: Original strand, 37435250 - 37435370
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||| ||| | | |||||||| |||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||  ||||||||      
T  37435250 aaaatttgacatcttaaataggttctggaagaacaaaagagagcaaatgaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaag-t 37435348  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
    || |||||||||||||||||||    
T  37435349 aatagtgctcctgaagtgatga 37435370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 86 - 171
Target Start/End: Original strand, 14904048 - 14904133
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa 171  Q
    ||||||||| ||||| |||||||||| |||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||    
T  14904048 aaaatttgagatcatcattaggttctggaagaacaaaagagagcaaatgaataaacaaaaaagaagcttaaagcgtctgaagagaa 14904133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 105 - 205
Target Start/End: Original strand, 14604655 - 14604756
Alignment:
Q  105 aggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagacaaaagtgctcctgaagtga 202  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||| || |||||||||||||||  |||||||| | |||||||||||||||| |    
T  14604655 aggttctggaagaacaaaagagagctaaggaatcaacaaaaaggaagcttgaaacgtctgaagagaagtgctcctgaagtc-aaagtgctcctgaagtaa 14604753  T
Q  203 tga 205  Q
    |||    
T  14604754 tga 14604756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 113 - 205
Target Start/End: Complemental strand, 45833751 - 45833657
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaagtgatga 205  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||| |||||| ||||  | |||||||||||||||||||| |||||||||||    
T  45833751 gaagaacaaaagagagcaaacgaatcaacaaaaaggaagcttgaagcatctgaaaagaagcgctcctgaagacaaaagtgctcttgaagtgatga 45833657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 113 - 201
Target Start/End: Original strand, 13575900 - 13575989
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaagtg 201  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||  | |||||||||| |||||||||||||||||    
T  13575900 gaagaacaatagagagcaaatgaatcaacaaaaaggaagcttaaagcgtctgaagaaaactgctcctgaagac-aaagtgctcctgaagtg 13575989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 113 - 201
Target Start/End: Complemental strand, 54680253 - 54680164
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaagtg 201  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||  | |||||||||| |||||||||||||||||    
T  54680253 gaagaacaataaagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagaaaattgctcctgaagac-aaagtgctcctgaagtg 54680164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 105 - 205
Target Start/End: Complemental strand, 56034922 - 56034821
Alignment:
Q  105 aggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagacaaaagtgctcctgaagtga 202  Q
    ||||||| |||||||||||||||||||| |||||||||||||| |||||| ||||||||||||| ||||  ||||||||  ||||||||| |||||||||    
T  56034922 aggttctggaagaacaaaagagagcaaatgaatcaacaaaaagaaagcttgaagcgtctgaagaaaagtgatcctgaag-taaaagtgcttctgaagtga 56034824  T
Q  203 tga 205  Q
    |||    
T  56034823 tga 56034821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 82 - 171
Target Start/End: Complemental strand, 3498020 - 3497931
Alignment:
Q  82 agacaaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa 171  Q
    ||||||||||||| ||| | |  ||||| | ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  3498020 agacaaaatttgacatcttaaaaaggttttggaagaacaatatagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa 3497931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 90 - 173
Target Start/End: Complemental strand, 55380621 - 55380538
Alignment:
Q  90 tttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    |||||||||  |||| ||||||  || ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  55380621 tttgatatctgtatttggttctgaaaaaacaaaagagagctaaggaatcaacaaaaaggaagcttgaagcgtctgaagagaagt 55380538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 82 - 168
Target Start/End: Complemental strand, 16853866 - 16853780
Alignment:
Q  82 agacaaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    ||||||||||||||||| | |  ||||  |||||||||||   ||||||||||||||||||||||||||||||||||||||||||||    
T  16853866 agacaaaatttgatatcttaaaaaggtctttgaagaacaattaagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 16853780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 159
Target Start/End: Complemental strand, 23750827 - 23750755
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagc 159  Q
    ||||||||||||  |||||||||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||    
T  23750827 aaaatttgatatatttattaggttctagaagaacaaaaaagagctaaggaatcaac-aaaaggaagcttaaagc 23750755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 12810923 - 12810991
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagctt 154  Q
    ||||||||| ||| | | |||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  12810923 aaaatttgacatcttaaataggttctggaagaacaaaagagagcaatggaatcaacaaaaaggaagctt 12810991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 136
Target Start/End: Original strand, 19911667 - 19911718
Alignment:
Q  85 caaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaa 136  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  19911667 caaaatttgatatcattatgaggttctggaagaacaaaagagagcaaaggaa 19911718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 113 - 200
Target Start/End: Original strand, 22675306 - 22675394
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagacaaaagtgctcctgaagt 200  Q
    ||||||||| |||||||||||||||||||||||  ||| ||||||||||||||||| || |  |||| ||||| ||||||||||||||||    
T  22675306 gaagaacaatagagagcaaaggaatcaacaaaattgaatcttaaagcgtctgaagaaaacttctcctaaagac-aaagtgctcctgaagt 22675394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 168
Target Start/End: Complemental strand, 55732181 - 55732095
Alignment:
Q  82 agacaaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    ||||||||||||||||| | |  ||||  | ||||||||| | ||||||||| ||||||||||| ||||||||||||||||||||||    
T  55732181 agacaaaatttgatatcttaaaaaggtcttggaagaacaataaagagcaaagaaatcaacaaaagggaagcttaaagcgtctgaaga 55732095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 17540783 - 17540719
Alignment:
Q  104 taggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    |||||||| |||||||||| |||||||| ||||||||||| |||||||||| |||| ||||||||    
T  17540783 taggttctggaagaacaaatgagagcaatggaatcaacaagaaggaagcttgaagcatctgaaga 17540719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 40846466 - 40846378
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaa-gagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||||||| ||||||||||||  |||||||||  |||||  | |||||||||||||||||||||| |||| |||||||| ||||    
T  40846466 aaaatttgatatctttattaggttctgaaagaacaaattgagagttatggaatcaacaaaaaggaagcttgaagcatctgaagaaaagt 40846378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 3793446 - 3793391
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    ||||||||| | ||||||||||||||||||||||| |||||||||| |||||||||    
T  3793446 gaagaacaataaagagcaaaggaatcaacaaaaagaaagcttaaagtgtctgaaga 3793391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 204
Target Start/End: Complemental strand, 29121730 - 29121637
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaa-ggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaagtgatg 204  Q
    ||||||||| | |||||||||||||||||||||| ||||||||||| |||||||||| ||  |  ||||||||| ||||||||| ||||||||||    
T  29121730 gaagaacaataaagagcaaaggaatcaacaaaaagggaagcttaaaacgtctgaagaaaactgcacctgaagac-aaagtgctcttgaagtgatg 29121637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 125 - 168
Target Start/End: Complemental strand, 8106015 - 8105971
Alignment:
Q  125 agagcaaaggaatcaacaaaaa-ggaagcttaaagcgtctgaaga 168  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  8106015 agagcaaaggaatcaacaaaaagggaagcttaaagcgtctgaaga 8105971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 186
Target Start/End: Complemental strand, 19885046 - 19884969
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaa--aaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaa 186  Q
    |||||| || ||||||||| ||||||||||||  |||||||||||||||||||||||| ||  | |||||||||||||    
T  19885046 gaagaataatagagagcaatggaatcaacaaaccaaggaagcttaaagcgtctgaagaaaactgctcctgaagacaaa 19884969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 147
Target Start/End: Complemental strand, 33378791 - 33378757
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaag 147  Q
    |||||||||||||||||||||||||||||||||||    
T  33378791 gaagaacaaaagagagcaaaggaatcaacaaaaag 33378757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 168
Target Start/End: Complemental strand, 10693197 - 10693153
Alignment:
Q  125 agagcaaaggaatcaacaaaaa-ggaagcttaaagcgtctgaaga 168  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||    
T  10693197 agagcaaaggaatcaacaaaaagggaagcttaaagcgtttgaaga 10693153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 168
Target Start/End: Complemental strand, 10906963 - 10906919
Alignment:
Q  125 agagcaaaggaatcaacaaaaa-ggaagcttaaagcgtctgaaga 168  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||    
T  10906963 agagcaaaggaatcaacaaaaagggaagcttaaagcgtttgaaga 10906919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 168
Target Start/End: Original strand, 17787792 - 17787848
Alignment:
Q  112 tgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    ||||||||||| |||||||| | ||||||||| |||||||||| |||| ||||||||    
T  17787792 tgaagaacaaatgagagcaatgaaatcaacaagaaggaagcttgaagcatctgaaga 17787848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 163
Target Start/End: Complemental strand, 17247616 - 17247565
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaagg-aagcttaaagcgtct 163  Q
    ||||||||| | |||||||||||||||||||||||| |||||||||| ||||    
T  17247616 gaagaacaacaaagagcaaaggaatcaacaaaaaggaaagcttaaagtgtct 17247565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 11901580 - 11901530
Alignment:
Q  104 taggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagctt 154  Q
    |||||||| |||||||||| |||| ||| ||||| ||||||||||||||||    
T  11901580 taggttctggaagaacaaatgagaacaatggaattaacaaaaaggaagctt 11901530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 3105230 - 3105301
Alignment:
Q  136 atcaacaaaaagg-aagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaagtgatga 205  Q
    ||||||||||||| |||||||||| ||||||||| ||  | |||||||||| || ||||||||||||||||||    
T  3105230 atcaacaaaaagggaagcttaaagtgtctgaagaaaactgctcctgaagac-aaggtgctcctgaagtgatga 3105301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 141
Target Start/End: Original strand, 17993519 - 17993547
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaac 141  Q
    |||||||||||||||||||||||||||||    
T  17993519 gaagaacaaaagagagcaaaggaatcaac 17993547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 2e-46; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 13649084 - 13648963
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||  ||||||||||    
T  13649084 aaaatttgatatctttattaggttctagaagaacaaaagagagcaaaggaatcaacaaaaaggaagtttaaggcgtctgaagagaagtgctcctgaagac 13648985  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
    ||||||||||||||||||||||    
T  13648984 aaaagtgctcctgaagtgatga 13648963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 82 - 205
Target Start/End: Complemental strand, 13692730 - 13692605
Alignment:
Q  82 agacaaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctga 179  Q
    |||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||  ||||||    
T  13692730 agacaaaaattgatatctttattaggttctggaagaacaaaagagagcaaaggaatcaggaaaaaggaagcttaaggcgtctgaagagaagtgctcctga 13692631  T
Q  180 agacaaaagtgctcctgaagtgatga 205  Q
    ||||||||||||||||||||||||||    
T  13692630 agacaaaagtgctcctgaagtgatga 13692605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 86 - 205
Target Start/End: Original strand, 2913394 - 2913515
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||  ||||||||||    
T  2913394 aaaatttgatatctttagtaggttctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcatatgaagagaagtgctcctgaagac 2913493  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
    ||||||||||||||||| ||||    
T  2913494 aaaagtgctcctgaagtaatga 2913515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 86 - 209
Target Start/End: Original strand, 29935151 - 29935273
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaag-ttcctgaagaca 184  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||| || |||||| |     
T  29935151 aaaatttgatatcattattaggttctggaagaacaaaagagagctaaggaatcaacaaaaaggaagcttaaatcgtctcaagagaagttttctgaagtc- 29935249  T
Q  185 aaagtgctcctgaagtgatgatgtc 209  Q
     ||||||||||||||||||||||||    
T  29935250 -aagtgctcctgaagtgatgatgtc 29935273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 11319790 - 11319670
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||  |||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||  |||||||| |    
T  11319790 aaaatttggaatcattattaggttctggaagaacaaaagagagcaatgaaatcaacaaaaaggaagcttaaagcgtctgaagagaagtgctcctgaag-c 11319692  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
     |||||||||||||||||||||    
T  11319691 caaagtgctcctgaagtgatga 11319670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 10882946 - 10883063
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  | |||||| |    
T  10882946 aaaatttggaatcattattaggttctggaagaacaaaagagagcaaaggaatcaacaaaaatgaagcttaaagcgtctgaagagaagtgctactgaagtc 10883045  T
Q  184 aaaagtgctcctgaagtga 202  Q
     ||||||||||||||||||    
T  10883046 -aaagtgctcctgaagtga 10883063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 87 - 205
Target Start/End: Complemental strand, 13880488 - 13880369
Alignment:
Q  87 aaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagaca 184  Q
    |||||||| ||| | | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||| |     
T  13880488 aaatttgacatcttaaataggttctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagtgcttctgaagtc- 13880390  T
Q  185 aaagtgctcctgaagtgatga 205  Q
    |||||||||||||||||||||    
T  13880389 aaagtgctcctgaagtgatga 13880369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 2500410 - 2500289
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||| ||| | | |||||| | ||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||  ||||||||||    
T  2500410 aaaatttgacatcttaaataggttatggaagaacaaaagagagctaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagac 2500311  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
    |||||||||| |||||||||||    
T  2500310 aaaagtgctcatgaagtgatga 2500289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 86 - 205
Target Start/End: Original strand, 13137697 - 13137817
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    |||||||||| || |||||||||||| ||||||||||||||||  |||||||||||||||||||||||| |||| |||||||||||||  |||||||| |    
T  13137697 aaaatttgatctctttattaggttctggaagaacaaaagagaggtaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagtc 13137796  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
     |||||||||||||||||||||    
T  13137797 -aaagtgctcctgaagtgatga 13137817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 86 - 209
Target Start/End: Original strand, 13260397 - 13260522
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    |||||||||||||||||||||||| ||||||||||||||||||  ||||||| |||| ||||||||||| |||| | | |||||||||  || ||||| |    
T  13260397 aaaatttgatatcattattaggttattgaagaacaaaagagagataaggaattaacataaaggaagcttgaagcatttaaagagaagtgctcatgaagtc 13260496  T
Q  184 aaaagtgctcctgaagtgatgatgtc 209  Q
    ||||||||||||||||||||||||||    
T  13260497 aaaagtgctcctgaagtgatgatgtc 13260522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 86 - 195
Target Start/End: Original strand, 48800414 - 48800524
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||  |||||||| |    
T  48800414 aaaatttgatatctttattaggttctggaagaacaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagtc 48800513  T
Q  184 aaaagtgctcct 195  Q
     |||||||||||    
T  48800514 -aaagtgctcct 48800524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 13303206 - 13303119
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||| |||||||||||||| | ||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||    
T  13303206 aaaatttgaaatcattattaggttatggaagaacaaaagagagcaaagaaatcaacaaaaaagaagtttaaagcgtctgaagagaagt 13303119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 86 - 173
Target Start/End: Original strand, 13730483 - 13730569
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||    
T  13730483 aaaatttgaaatcattattaggttctggaagaacaaaagagagcaaaggaatcaacaaaaaggaaacttaaggcgtc-gaagagaagt 13730569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 86 - 173
Target Start/End: Original strand, 16316349 - 16316436
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||||||| ||||||||||||  |||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||    
T  16316349 aaaatttgatatctttattaggttctgaaagaacaaaagagagctaaggaatcaacaaaaaggaagcttgaagcgtctaaagagaagt 16316436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 105 - 201
Target Start/End: Original strand, 33691518 - 33691615
Alignment:
Q  105 aggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaagtg 201  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||  | |||||||||| |||||||||||||||||    
T  33691518 aggttctggaagaacaatagagagcaaaggaatcaacaaaaaggaagtttaaagcgtctgaagagaactgctcctgaagac-aaagtgctcctgaagtg 33691615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 86 - 205
Target Start/End: Original strand, 12366523 - 12366643
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||||||| |||||||||||| |||||| |||||||||||| |||||||||||||||||||||| |||| ||| |||||||||  |||||||       
T  12366523 aaaatttgatatctttattaggttctggaagaaaaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctaaagagaagtgctcctgaa-tt 12366621  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
     |||||||||||||||||||||    
T  12366622 taaagtgctcctgaagtgatga 12366643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 30026276 - 30026156
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||| ||| | | |||||| | |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||  | ||||||      
T  30026276 aaaatttgacatcttaaataggttatggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgcttctgaag-t 30026178  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
    ||||||||||||||||||||||    
T  30026177 aaaagtgctcctgaagtgatga 30026156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 11793292 - 11793205
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||||||| |||||||||||  ||||||||||||||||| |||||||||||||||||||||||| |||| |||||| ||||||    
T  11793292 aaaatttgatatctttattaggttcaggaagaacaaaagagagcgaaggaatcaacaaaaaggaagcttgaagcatctgaaaagaagt 11793205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 104 - 173
Target Start/End: Complemental strand, 15088856 - 15088787
Alignment:
Q  104 taggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  15088856 taggttctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagt 15088787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 113 - 201
Target Start/End: Original strand, 9709633 - 9709722
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaagtg 201  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||  | |||||||||| |||||||||||||||||    
T  9709633 gaagaacaatagagagcaaatgaatcaacaaaaaggaagcttaaagcgtctgaagaaaactgctcctgaagac-aaagtgctcctgaagtg 9709722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 113 - 201
Target Start/End: Complemental strand, 14426872 - 14426783
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaagtg 201  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||  | |||||||||| |||||||||||||||||    
T  14426872 gaagaacaataaagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagaaaactgctcctgaagac-aaagtgctcctgaagtg 14426783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 21695755 - 21695668
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    |||||||| |||| |||||||||||| ||||||||||||||||  |||||||||||||||||||||||| || ||| |||||||||||    
T  21695755 aaaatttggtatctttattaggttctggaagaacaaaagagagttaaggaatcaacaaaaaggaagcttgaatcgtttgaagagaagt 21695668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 44467435 - 44467316
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||| ||||| | |||||||| ||||||||||| ||||||| ||||||||||||||||||| || |||| |||||||||||||  ||||||||      
T  44467435 aaaatttgacatcataaataggttctggaagaacaaaatagagcaatggaatcaacaaaaaggaagtttgaagcatctgaagagaagtgctcctgaag-- 44467338  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
     | |||||||||||||||||||    
T  44467337 tatagtgctcctgaagtgatga 44467316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 105 - 205
Target Start/End: Complemental strand, 14193445 - 14193339
Alignment:
Q  105 aggttcttgaagaacaaaagagagcaaag----gaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagacaaaagtgctcctgaa 198  Q
    ||||||| ||||||||||||||||| ||     ||||||||||||| ||||||| |||||||||||||||||   |||||||||||||||||||||||||    
T  14193445 aggttctggaagaacaaaagagagctaattaaagaatcaacaaaaatgaagcttgaagcgtctgaagagaagcgctcctgaagacaaaagtgctcctgaa 14193346  T
Q  199 gtgatga 205  Q
    |||||||    
T  14193345 gtgatga 14193339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 82 - 201
Target Start/End: Original strand, 30944126 - 30944245
Alignment:
Q  82 agacaaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctga 179  Q
    ||||||||||||||||| |||  ||||  ||||||||||| | |||||||| |||||||||||||||||||||||||||| |||||| ||  | ||||||    
T  30944126 agacaaaatttgatatc-ttaaaaggtctttgaagaacaataaagagcaaatgaatcaacaaaaaggaagcttaaagcgtttgaagaaaactgctcctga 30944224  T
Q  180 agacaaaagtgctcctgaagtg 201  Q
    |||| |||||||||||||||||    
T  30944225 agac-aaagtgctcctgaagtg 30944245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 82 - 201
Target Start/End: Original strand, 30945159 - 30945278
Alignment:
Q  82 agacaaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctga 179  Q
    ||||||||||||||||| |||  ||||  ||||||||||||| |||||||| || ||||||||||||||||||||| |||||||||| ||  | ||||||    
T  30945159 agacaaaatttgatatc-ttaaaaggtctttgaagaacaaaaaagagcaaatgagtcaacaaaaaggaagcttaaaacgtctgaagaaaactgctcctga 30945257  T
Q  180 agacaaaagtgctcctgaagtg 201  Q
    |||| |||||||||||||||||    
T  30945258 agac-aaagtgctcctgaagtg 30945278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 86 - 209
Target Start/End: Original strand, 5000627 - 5000752
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaaga-gagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaaga 182  Q
    ||||||||||||||||||||||||||  |||| ||||  | |||| ||||||||||||||||||||| || || | |||||||||||||  ||||||||     
T  5000627 aaaatttgatatcattattaggttctgaaagagcaaattaagagctaaggaatcaacaaaaaggaagtttgaaacatctgaagagaagtgatcctgaagt 5000726  T
Q  183 caaaagtgctcctgaagtgatgatgtc 209  Q
    | |||||||||||||||||| ||||||    
T  5000727 c-aaagtgctcctgaagtgacgatgtc 5000752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 4494858 - 4494739
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||| ||| | | |||||||| ||||||| ||||||||||| | |||||||||||||||||||| |||| ||| |||||||||  ||||||||      
T  4494858 aaaatttgacatcttaaataggttctggaagaacgaaagagagcaatgaaatcaacaaaaaggaagcttgaagcatctaaagagaagtgctcctgaag-- 4494761  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
     | |||||||||||||||||||    
T  4494760 tatagtgctcctgaagtgatga 4494739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 173
Target Start/End: Original strand, 13031860 - 13031946
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||||||| |||||||||||| ||||||| ||||||||||| |||||||||||  | ||||||| ||||||||||||| ||||    
T  13031860 aaaatttgatatctttattaggttctggaagaac-aaagagagcaatggaatcaacaaggatgaagcttgaagcgtctgaagaaaagt 13031946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 28409419 - 28409332
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||| ||| | | ||||||||  ||||||||||||||||||| ||||| |||||||||||| || ||||||||||||||||||    
T  28409419 aaaatttgacatcttaaataggttctgtaagaacaaaagagagcaaatgaatcgacaaaaaggaagtttgaagcgtctgaagagaagt 28409332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 35952471 - 35952526
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  35952471 gaagaacaataaagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 35952526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 86 - 173
Target Start/End: Original strand, 13018297 - 13018383
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||||||| |||||||||||  |||||||||| |||||||| |||||||||||  | ||||||| ||||||||||||| ||||    
T  13018297 aaaatttgatatctttattaggttcgggaagaacaaa-gagagcaatggaatcaacaaggatgaagcttcaagcgtctgaagaaaagt 13018383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 16111683 - 16111738
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    ||||||||| | |||| |||||||||||||||||||||||||||||||||||||||    
T  16111683 gaagaacaataaagagaaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 16111738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 48236734 - 48236789
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    ||||||||| | |||| |||||||||||||||||||||||||||||||||||||||    
T  48236734 gaagaacaataaagagtaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 48236789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 205
Target Start/End: Original strand, 22577793 - 22577916
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaag-agagcaaaggaatcaacaaaaaggaagcttaaa--gcgtctgaagagaagt--tcctgaa 180  Q
    ||||||||| ||| | | |||||||| |||||||||||| |||||||| ||||||||||||||||||||| ||  ||  | ||||||||||  |||||||    
T  22577793 aaaatttgacatcttaaataggttctggaagaacaaaaggagagcaaatgaatcaacaaaaaggaagcttgaagtgctccagaagagaagtgctcctgaa 22577892  T
Q  181 gacaaaagtgctcctgaagtgatga 205  Q
    |  ||||||||||||||||||||||    
T  22577893 g-taaaagtgctcctgaagtgatga 22577916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 13880956 - 13880888
Alignment:
Q  105 aggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||| |||||||||| |||||||| ||||||||||| |||||||||| |||| |||||||| ||||    
T  13880956 aggttctggaagaacaaatgagagcaatggaatcaacaagaaggaagcttgaagcatctgaagaaaagt 13880888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 186
Target Start/End: Complemental strand, 33606045 - 33605970
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaa 186  Q
    ||||||||| | ||||||||||||||||||| ||||||||||||| | |||||||| ||  |||||||||||||||    
T  33606045 gaagaacaataaagagcaaaggaatcaacaataaggaagcttaaaacatctgaagaaaactgttcctgaagacaaa 33605970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 12174124 - 12174179
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    ||||||||| | |||||||||||||||||||||| |||||||||| ||||||||||    
T  12174124 gaagaacaataaagagcaaaggaatcaacaaaaaagaagcttaaaacgtctgaaga 12174179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 16542837 - 16542891
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    ||||||||| | |||||||||||||||||||||||||||||| |||||||||||||    
T  16542837 gaagaacaataaagagcaaaggaatcaacaaaaaggaagctt-aagcgtctgaaga 16542891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 16622825 - 16622771
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    ||||||||| | |||||||||||||||||||||||||||||| |||||||||||||    
T  16622825 gaagaacaataaagagcaaaggaatcaacaaaaaggaagctt-aagcgtctgaaga 16622771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 24788450 - 24788391
Alignment:
Q  114 aagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    |||| |||||||||||||| |||||||||||| |||||||| |||| |||||||||||||    
T  24788450 aagaccaaaagagagcaaatgaatcaacaaaatggaagcttgaagcatctgaagagaagt 24788391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 28622166 - 28622221
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    ||||||||| | |||||||||||||||||||||| |||||||||||||| ||||||    
T  28622166 gaagaacaataaagagcaaaggaatcaacaaaaatgaagcttaaagcgtatgaaga 28622221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 209
Target Start/End: Original strand, 9098035 - 9098141
Alignment:
Q  103 ttaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagaga--agttcctgaagacaaaagtgctcctgaagt 200  Q
    |||| |||| |||||||||| |||||||| ||||||||||| | |||||||| |||| |||||||| |  || | |||||| |  |||||||||||||||    
T  9098035 ttagattctggaagaacaaatgagagcaatggaatcaacaagatggaagcttgaagcatctgaagaaaagaggttctgaagtc--aagtgctcctgaagt 9098132  T
Q  201 gatgatgtc 209  Q
    |||||||||    
T  9098133 gatgatgtc 9098141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 23279813 - 23279879
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagc 152  Q
    ||||||||| ||||| |  ||||||| ||||||||| |||||||||| |||||||||||||||||||    
T  23279813 aaaatttgacatcataaaaaggttctggaagaacaatagagagcaaaagaatcaacaaaaaggaagc 23279879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 167
Target Start/End: Complemental strand, 332015 - 331955
Alignment:
Q  106 ggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaag 167  Q
    |||||| ||||||||||||||||| |||||| |||| ||||||||||||||||| |||||||    
T  332015 ggttctggaagaacaaaagagagctaaggaaacaac-aaaaggaagcttaaagcatctgaag 331955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 199
Target Start/End: Original strand, 7339683 - 7339770
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaag 199  Q
    ||||||||| | |||||||| |||| || |||||||| |||||||||||||||||| ||  |||| |||||| ||||||||||||||||    
T  7339683 gaagaacaataaagagcaaatgaataaaaaaaaaggatgcttaaagcgtctgaagaaaagtgttcatgaaga-aaaagtgctcctgaag 7339770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 173
Target Start/End: Original strand, 41842079 - 41842167
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaa-agagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||||||| ||||||||||||  |||||||||  |||||  | |||||||||||||||||||||| | || |||||||| ||||    
T  41842079 aaaatttgatatctttattaggttctgaaagaacaaattgagagttatggaatcaacaaaaaggaagcttgatgcatctgaagaaaagt 41842167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 101 - 168
Target Start/End: Original strand, 13890734 - 13890801
Alignment:
Q  101 tattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    ||||||||||| | |||||||| || ||||| ||||||||||| |||||||||| |||| ||||||||    
T  13890734 tattaggttctgggagaacaaatgaaagcaatggaatcaacaagaaggaagcttgaagcatctgaaga 13890801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 19710799 - 19710853
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaag-gaagcttaaagcgtctgaa 166  Q
    |||||||||||||||||||| |||||||||||||| ||||| |||||| ||||||    
T  19710799 gaagaacaaaagagagcaaatgaatcaacaaaaagagaagcctaaagcatctgaa 19710853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 15469825 - 15469781
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaa 157  Q
    ||||||||| |||||||||||||||||||||| | ||||||||||    
T  15469825 gaagaacaatagagagcaaaggaatcaacaaatacgaagcttaaa 15469781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 143
Target Start/End: Original strand, 8998678 - 8998708
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaa 143  Q
    |||||||||||||||||||||||||||||||    
T  8998678 gaagaacaaaagagagcaaaggaatcaacaa 8998708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 143
Target Start/End: Original strand, 11086804 - 11086834
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaa 143  Q
    |||||||||||||||||||||||||||||||    
T  11086804 gaagaacaaaagagagcaaaggaatcaacaa 11086834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 167
Target Start/End: Complemental strand, 21692595 - 21692542
Alignment:
Q  114 aagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaag 167  Q
    |||||||||||||||  ||| |||||||| ||| ||||||| ||||||||||||    
T  21692595 aagaacaaaagagagttaagaaatcaacataaaagaagcttgaagcgtctgaag 21692542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 168
Target Start/End: Original strand, 16556576 - 16556604
Alignment:
Q  140 acaaaaaggaagcttaaagcgtctgaaga 168  Q
    |||||||||||||||||||||||||||||    
T  16556576 acaaaaaggaagcttaaagcgtctgaaga 16556604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 168
Target Start/End: Complemental strand, 16609086 - 16609058
Alignment:
Q  140 acaaaaaggaagcttaaagcgtctgaaga 168  Q
    |||||||||||||||||||||||||||||    
T  16609086 acaaaaaggaagcttaaagcgtctgaaga 16609058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 173
Target Start/End: Original strand, 39284416 - 39284456
Alignment:
Q  133 ggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    |||||||||||||||||||||| ||| ||||||||| ||||    
T  39284416 ggaatcaacaaaaaggaagcttgaagtgtctgaagaaaagt 39284456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 2e-46; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 25829487 - 25829366
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||  |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  25829487 aaaatttggaatcactattaggttctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagtgctcctgaagac 25829388  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
    ||||||||||||||||||||||    
T  25829387 aaaagtgctcctgaagtgatga 25829366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 96 - 205
Target Start/End: Complemental strand, 22260778 - 22260667
Alignment:
Q  96 atcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagacaaaagtgctc 193  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||  |||||||||||||| |||||    
T  22260778 atcattattaggttctagaagaacaaaagagagcaaaggaatcaacaaaaaggaagtttaaggcgtctgaagagaagtgctcctgaagacaaaaatgctc 22260679  T
Q  194 ctgaagtgatga 205  Q
    ||||||||||||    
T  22260678 ctgaagtgatga 22260667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 86 - 205
Target Start/End: Original strand, 20568466 - 20568587
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||| ||||  ||||||||||    
T  20568466 aaaatttggaatcattattaggttcttgaagaacaaaagagagtaaaggaatcaacaaaaaggaagcttaagacgtctgaagataagtgctcctgaagac 20568565  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
    |||||||||| ||| |||||||    
T  20568566 aaaagtgctcatgaggtgatga 20568587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 86 - 199
Target Start/End: Complemental strand, 38631337 - 38631222
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||| |||||||||||||||| ||| ||||||||||||||||| |||||||||||| ||||||| |||| |||||||||||||  ||||||||||    
T  38631337 aaaatttgaaatcattattaggttctggaaaaacaaaagagagcaaagaaatcaacaaaaatgaagcttgaagcatctgaagagaagtgctcctgaagac 38631238  T
Q  184 aaaagtgctcctgaag 199  Q
    | ||||||||||||||    
T  38631237 agaagtgctcctgaag 38631222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 87 - 173
Target Start/End: Original strand, 25036986 - 25037072
Alignment:
Q  87 aaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    |||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  25036986 aaatttgatatctttattaggttctggaagaaaaaaagagagcaaaggaatcaacaaaaacgaagcttaaagcatctgaagagaagt 25037072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 87 - 173
Target Start/End: Original strand, 25041093 - 25041179
Alignment:
Q  87 aaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    |||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  25041093 aaatttgatatctttattaggttctggaagaaaaaaagagagcaaaggaatcaacaaaaacgaagcttaaagcatctgaagagaagt 25041179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 30667372 - 30667252
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||||||| |||||||||||| ||||||||| |||||||||  ||||||||||||||||||||| |||| |||||||||||||  ||| |||| |    
T  30667372 aaaatttgatatctttattaggttctggaagaacaatagagagcaattgaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcccgaagtc 30667273  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
     |||||||||||||||||||||    
T  30667272 -aaagtgctcctgaagtgatga 30667252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 19540781 - 19540662
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagac 183  Q
    ||||||||||||  |||||||||| | ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||  |||||||||| |    
T  19540781 aaaatttgatatatttattaggttttggaagaacaaaagagagctaaggaatcaacaaaaagaaagcttaaagcgtctgaagaaaagtgttcctgaagtc 19540682  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
       |||||||||||||||||||    
T  19540681 --tagtgctcctgaagtgatga 19540662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 86 - 205
Target Start/End: Original strand, 24850383 - 24850502
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    |||| |||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||| |||||||| ||||  |||||||| |    
T  24850383 aaaaattgatatctttattaggttctcgaagaacaaaagagagctaaggaatcaacaaaaaggaagcttgaagcatctgaagaaaagtgctcctgaagtc 24850482  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
      ||||||||||||||| ||||    
T  24850483 --aagtgctcctgaagtaatga 24850502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 86 - 168
Target Start/End: Original strand, 18376654 - 18376736
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    ||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||    
T  18376654 aaaatttgatatcgttattaggttctggaagaacaaaagagagctaaggaatcaacaaaaaggaagcttgaagcatctgaaga 18376736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 23235390 - 23235270
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||| ||| | | |||||||| |||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||  || ||||| |    
T  23235390 aaaatttgacatcttaaataggttctagaagaacaaaagagagcaattgaatcaacaaaaagtaagcttaaagcgtctgaagagaagtgctcttgaagtc 23235291  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
     |||||||||||||||||||||    
T  23235290 -aaagtgctcctgaagtgatga 23235270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 87 - 205
Target Start/End: Complemental strand, 30621569 - 30621450
Alignment:
Q  87 aaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagaca 184  Q
    |||||||||||| |||||||||||| ||||||||| ||||||||| |||||||||||||||||||||| |||| ||| |||||||||  ||  |||| |     
T  30621569 aaatttgatatctttattaggttctggaagaacaatagagagcaatggaatcaacaaaaaggaagcttcaagcatctaaagagaagtgctctcgaagtc- 30621471  T
Q  185 aaagtgctcctgaagtgatga 205  Q
    |||||||||||||||||||||    
T  30621470 aaagtgctcctgaagtgatga 30621450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 87 - 205
Target Start/End: Complemental strand, 30624190 - 30624071
Alignment:
Q  87 aaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagaca 184  Q
    |||||||||||| |||||||||||| ||||||||| ||||||||| |||||||||||||||||||||| |||| ||| |||||||||  ||  |||| |     
T  30624190 aaatttgatatctttattaggttctggaagaacaatagagagcaatggaatcaacaaaaaggaagcttcaagcatctaaagagaagtgctctcgaagtc- 30624092  T
Q  185 aaagtgctcctgaagtgatga 205  Q
    |||||||||||||||||||||    
T  30624091 aaagtgctcctgaagtgatga 30624071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 82 - 205
Target Start/End: Original strand, 28140346 - 28140473
Alignment:
Q  82 agacaaaattt-gatatcattattaggttcttgaagaacaaaaga-gagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcct 177  Q
    ||||||||||| |||||||||||||||||||  ||||  |||  | |||| ||||||||||||||||||||||||| | |||||||||||||||  ||||    
T  28140346 agacaaaattttgatatcattattaggttctgaaagagaaaattaagagctaaggaatcaacaaaaaggaagcttagaacgtctgaagagaagtgctcct 28140445  T
Q  178 gaagacaaaagtgctcctgaagtgatga 205  Q
    |||| |||||||||||||||||||||||    
T  28140446 gaagtcaaaagtgctcctgaagtgatga 28140473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 86 - 205
Target Start/End: Original strand, 9015088 - 9015208
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||| ||| | | |||||||| ||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||  || |||||      
T  9015088 aaaatttgaaatcttaaataggttctggaagaacaaaagagagcaaaggaatcaacaaaatggaagcttgaagcatctgaagagaagtgctcttgaag-t 9015186  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
    ||||||| ||||||||||||||    
T  9015187 aaaagtgatcctgaagtgatga 9015208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 105 - 171
Target Start/End: Complemental strand, 22317976 - 22317910
Alignment:
Q  105 aggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa 171  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22317976 aggttctagaagaacaatagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa 22317910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 86 - 173
Target Start/End: Original strand, 22187836 - 22187923
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||  |||||||||||||| | ||||||||||| ||||||||||||||| |||||||||||||| |||| |||||||||||||    
T  22187836 aaaatttggaatcattattaggttatggaagaacaaaatagagcaaaggaatcagcaaaaaggaagcttgaagcatctgaagagaagt 22187923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 24377452 - 24377366
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||||||| |||||||||||  |||||||||||||||||||  ||||||||||||||||||||  |||| |||||||||||||    
T  24377452 aaaatttgatatctttattaggttca-gaagaacaaaagagagcaatagaatcaacaaaaaggaagctagaagcatctgaagagaagt 24377366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 40782854 - 40782732
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagag-caaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaaga 182  Q
    ||||||||||||||||||||||||||  |||| ||||  || | | |||||||||||||||||||||||| |||| |||||||||||||  |||||||      
T  40782854 aaaatttgatatcattattaggttctgaaagagcaaattaggggctaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaaag 40782755  T
Q  183 caaaagtgctcctgaagtgatga 205  Q
      |||||||||||||||||||||    
T  40782754 tcaaagtgctcctgaagtgatga 40782732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 24576432 - 24576312
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagac 183  Q
    ||||||||||||| |||||||||||| |||||| ||||| |||||| |||||||||||||||||||||| || | | |||||| ||  |||| ||||| |    
T  24576432 aaaatttgatatctttattaggttctggaagaaaaaaagggagcaatggaatcaacaaaaaggaagcttgaaacatatgaagataagtgttcatgaagtc 24576333  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
     |||||||| ||||||||||||    
T  24576332 -aaagtgcttctgaagtgatga 24576312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 113 - 198
Target Start/End: Original strand, 20151794 - 20151880
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaa 198  Q
    ||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| ||  | |||||||||| ||||||||||||||    
T  20151794 gaagaacaatagagagcaaagtaattaacaaaaaggaagcttaaagcgtctgaagaaaactgctcctgaagac-aaagtgctcctgaa 20151880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 173
Target Start/End: Original strand, 21536966 - 21537053
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||||||| |||||||||| | ||||||||||||||||| | | |||||||||||||||| ||||||   |||||||||||||    
T  21536966 aaaatttgatatctttattaggttttggaagaacaaaagagagctatgaaatcaacaaaaaggaaacttaaaatatctgaagagaagt 21537053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 38781744 - 38781677
Alignment:
Q  105 aggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaag 172  Q
    ||||||| |||||||||||||||||||  ||||||||||||||||||||| |||| ||||||||||||    
T  38781744 aggttctggaagaacaaaagagagcaattgaatcaacaaaaaggaagcttgaagcatctgaagagaag 38781677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 113 - 201
Target Start/End: Original strand, 28711456 - 28711546
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaac-aaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaagtg 201  Q
    ||||||||| | ||||||||||||||||| |||||||||||||||||||| |||||| ||  | |||||||||| |||||||||||||||||    
T  28711456 gaagaacaataaagagcaaaggaatcaacaaaaaaggaagcttaaagcgtttgaagaaaactgctcctgaagac-aaagtgctcctgaagtg 28711546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 13963727 - 13963790
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaagga 149  Q
    ||||||||| ||| | | |||||||| |||||||||||||||||||||||||||||||||||||    
T  13963727 aaaatttgacatcttaaataggttctggaagaacaaaagagagcaaaggaatcaacaaaaagga 13963790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 30557046 - 30557087
Alignment:
Q  127 agcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  30557046 agcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 30557087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 173
Target Start/End: Original strand, 10009484 - 10009572
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaa-agagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    |||| ||||||||||||||||||| |  |||| ||||   ||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  10009484 aaaagttgatatcattattaggttttgaaagagcaaattaagagctaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagt 10009572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 19115489 - 19115425
Alignment:
Q  104 taggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    |||||||| |||||||||| |||||||| ||||||||||  |||||||||| |||||||||||||    
T  19115489 taggttctggaagaacaaatgagagcaatggaatcaacaggaaggaagcttgaagcgtctgaaga 19115425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 28700955 - 28701011
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaa-ggaagcttaaagcgtctgaaga 168  Q
    ||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||    
T  28700955 gaagaacaataaagagcaaaggaatcaacaaaaagggaagcttaaagcgtctgaaga 28701011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 168
Target Start/End: Complemental strand, 6392980 - 6392937
Alignment:
Q  125 agagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  6392980 agagcaaaggaatcaacacaaaggaagcttaaagcgtctgaaga 6392937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 168
Target Start/End: Original strand, 45086847 - 45086934
Alignment:
Q  82 agacaaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaa-ggaagcttaaagcgtctgaaga 168  Q
    ||||||||||||||||| | |  ||||| | ||||||||| | ||||||||| | |||||||||| ||||||||||||||||||||||    
T  45086847 agacaaaatttgatatcttaaaaaggttttggaagaacaataaagagcaaagaagtcaacaaaaagggaagcttaaagcgtctgaaga 45086934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 199
Target Start/End: Original strand, 31800629 - 31800717
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaa-ggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaag 199  Q
    ||||||||| | ||| |||||||||||||||||| |||||||||||||||||||||| ||  | |||||||||  |||||||||||||||    
T  31800629 gaagaacaataaagaacaaaggaatcaacaaaaagggaagcttaaagcgtctgaagaaaactgctcctgaaga-taaagtgctcctgaag 31800717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 39037391 - 39037461
Alignment:
Q  104 taggttcttgaagaacaaaa-gagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    |||||||| ||||||||||  |||||| | |||||||||||||||||||||| |||| |||||||||||||    
T  39037391 taggttctggaagaacaaattgagagctatggaatcaacaaaaaggaagcttgaagcatctgaagagaagt 39037461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 6573882 - 6573937
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    ||||||||| || |||||||||||| ||||||||||||||||||| | ||||||||    
T  6573882 gaagaacaatagggagcaaaggaattaacaaaaaggaagcttaaaacatctgaaga 6573937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 155
Target Start/End: Complemental strand, 20569824 - 20569773
Alignment:
Q  104 taggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagctta 155  Q
    |||||||| |||||||||| |||||||| |||||| ||||||||||||||||    
T  20569824 taggttctggaagaacaaatgagagcaatggaatctacaaaaaggaagctta 20569773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 24793729 - 24793784
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    |||||||||||||||||||||||||||||||||  ||| | |||||| ||||||||    
T  24793729 gaagaacaaaagagagcaaaggaatcaacaaaagagaaacctaaagcatctgaaga 24793784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 24814304 - 24814359
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    |||||||||||||||||||||||||||||||||  ||| | |||||| ||||||||    
T  24814304 gaagaacaaaagagagcaaaggaatcaacaaaagagaaacctaaagcatctgaaga 24814359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 26618851 - 26618906
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    |||||||||| |||||||| ||||||||||| |||||||||| ||| |||||||||    
T  26618851 gaagaacaaatgagagcaatggaatcaacaagaaggaagcttgaagagtctgaaga 26618906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 205
Target Start/End: Complemental strand, 22272494 - 22272393
Alignment:
Q  104 taggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagaga--agttcctgaagacaaaagtgctcctgaagtg 201  Q
    |||||||| |||||||||| |||||||| ||||||||||| ||||||| || ||||  ||||||| |  |||| |||||| ||||  | |||||||||||    
T  22272494 taggttctggaagaacaaatgagagcaatggaatcaacaagaaggaaggttgaagcaactgaagaaaagagtttctgaagtcaaa--tactcctgaagtg 22272397  T
Q  202 atga 205  Q
    ||||    
T  22272396 atga 22272393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 1084418 - 1084362
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaag-gaagcttaaagcgtctgaaga 168  Q
    ||||||||||||||||||||||||||| ||| ||| ||||| |||||| ||||||||    
T  1084418 gaagaacaaaagagagcaaaggaatcagcaagaagagaagcctaaagcatctgaaga 1084362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 18703137 - 18703073
Alignment:
Q  104 taggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    ||||||||  ||||||||   ||||||| ||||||||||| |||||||||| |||||||||||||    
T  18703137 taggttctacaagaacaagttagagcaatggaatcaacaagaaggaagcttgaagcgtctgaaga 18703073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 168
Target Start/End: Complemental strand, 22802862 - 22802775
Alignment:
Q  82 agacaaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaagg-aagcttaaagcgtctgaaga 168  Q
    ||||||||||||||||| | |  ||||  | ||||||||| | |||| || | |||||||||||||| ||||||||||||||||||||    
T  22802862 agacaaaatttgatatcttaaaaaggtcttggaagaacaataaagagtaatgaaatcaacaaaaagggaagcttaaagcgtctgaaga 22802775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 168
Target Start/End: Original strand, 31327668 - 31327755
Alignment:
Q  82 agacaaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaag-gaagcttaaagcgtctgaaga 168  Q
    |||||||| |||||||| | |  |||| || ||||||||| | |||||||||| |||||||||||| ||||||||| ||| |||||||    
T  31327668 agacaaaacttgatatcttaaaaaggtcctggaagaacaataaagagcaaaggcatcaacaaaaagagaagcttaacgcgcctgaaga 31327755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 168
Target Start/End: Original strand, 31334389 - 31334476
Alignment:
Q  82 agacaaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaag-gaagcttaaagcgtctgaaga 168  Q
    |||||||| |||||||| | |  |||| || ||||||||| | |||||||||| |||||||||||| ||||||||| ||| |||||||    
T  31334389 agacaaaacttgatatcttaaaaaggtcctggaagaacaataaagagcaaaggcatcaacaaaaagagaagcttaacgcgcctgaaga 31334476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 205
Target Start/End: Complemental strand, 38631229 - 38631198
Alignment:
Q  174 tcctgaagacaaaagtgctcctgaagtgatga 205  Q
    ||||||||||||||||||||||||||||||||    
T  38631229 tcctgaagacaaaagtgctcctgaagtgatga 38631198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 24440500 - 24440550
Alignment:
Q  104 taggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagctt 154  Q
    |||||||| |||||||||| |||||||| |||||  |||||||||||||||    
T  24440500 taggttctagaagaacaaacgagagcaatggaatttacaaaaaggaagctt 24440550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 173
Target Start/End: Original strand, 23184111 - 23184151
Alignment:
Q  133 ggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    |||||||||||||||||||||| |||| |||||||| ||||    
T  23184111 ggaatcaacaaaaaggaagcttgaagcatctgaagaaaagt 23184151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 145
Target Start/End: Original strand, 23392418 - 23392450
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaa 145  Q
    |||||||||||||||||||| ||||||||||||    
T  23392418 gaagaacaaaagagagcaaaagaatcaacaaaa 23392450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 173
Target Start/End: Original strand, 23595368 - 23595408
Alignment:
Q  133 ggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    |||||||||||||||||||||| |||| |||||||| ||||    
T  23595368 ggaatcaacaaaaaggaagcttgaagcatctgaagaaaagt 23595408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 86 - 209
Target Start/End: Complemental strand, 14000 - 13875
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||  |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||  ||||||||||    
T  14000 aaaatttggaatcattattaggttctggaagaacaaaagagagcaaaggaatcaacgaaaaggaagcttaatgcgtcagaagagaagtgctcctgaagac 13901  T
Q  184 aaaagtgctcctgaagtgatgatgtc 209  Q
    ||||||||||||||||| ||||||||    
T  13900 aaaagtgctcctgaagtaatgatgtc 13875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 2e-39; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 19156563 - 19156443
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||  |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||| |    
T  19156563 aaaatttggaatcattattaggttctagaagaacaaaagagagcaaagggatcaacaaaaaggaagcttaaagcgtctgaagagaagtgctcctgaagtc 19156464  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
     |||||||||||||||||||||    
T  19156463 -aaagtgctcctgaagtgatga 19156443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 90 - 205
Target Start/End: Complemental strand, 17267848 - 17267732
Alignment:
Q  90 tttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaa 187  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||  || ||||||| | |||    
T  17267848 tttgatatcattattaggttctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgtgcctgaagtc-aaa 17267750  T
Q  188 gtgctcctgaagtgatga 205  Q
    ||||| ||||||||||||    
T  17267749 gtgcttctgaagtgatga 17267732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 86 - 205
Target Start/End: Original strand, 17441593 - 17441713
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||| ||| | | |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||| |    
T  17441593 aaaatttgacatcttaaataggttctggaagaacaaaagagagcaaaggaatcaacgaaaaggaagcttaaagcgtctgaagagaagtgctcctgaagtc 17441692  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
     |||||||||||||||||||||    
T  17441693 -aaagtgctcctgaagtgatga 17441713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 86 - 205
Target Start/End: Original strand, 18120894 - 18121014
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagac 183  Q
    ||||||||| ||||| | |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||  | ||||||||||    
T  18120894 aaaatttgagatcatcaataggttctggaagaacaaaagagagcaaatgaatcaacaaaaaggaagcttaaagcgtttgaagagaactgctcctgaagac 18120993  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
     |||||||||||||||||||||    
T  18120994 -aaagtgctcctgaagtgatga 18121014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 86 - 205
Target Start/End: Original strand, 20255338 - 20255458
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagac 183  Q
    ||||||||  |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||  | |||||||| |    
T  20255338 aaaatttggaatcattattaggttctggaacaacaaaagagagcaaaggaatcaacaaaaaggaagtttaaagcgtctgaagagaactgctcctgaagtc 20255437  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
     |||||||||||||||||||||    
T  20255438 -aaagtgctcctgaagtgatga 20255458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 86 - 205
Target Start/End: Original strand, 16681076 - 16681195
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||  |||||||||||||||| |||||||||  || |||||| ||||||||||||| ||||||||||||||||||||||||||  ||||||||||    
T  16681076 aaaatttggaatcattattaggttctggaagaacaa--gatagcaaatgaatcaacaaaaatgaagcttaaagcgtctgaagagaagtgctcctgaagac 16681173  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
    |||||||||| |||||||||||    
T  16681174 aaaagtgctcatgaagtgatga 16681195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 86 - 205
Target Start/End: Original strand, 20382166 - 20382286
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||| ||| ||||||||||||  ||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||  |||||||| |    
T  20382166 aaaatttgacatctttattaggttctgaaagaacaaaagagagtaatggaatcaacaaaaaggaagcttgaagcgtctgaagagaagtgctcctgaagtc 20382265  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
     |||||||||||||||||||||    
T  20382266 -aaagtgctcctgaagtgatga 20382286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 96 - 205
Target Start/End: Complemental strand, 29693688 - 29693576
Alignment:
Q  96 atcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac-aaaagtgct 192  Q
    |||| |||||||| || |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||  || ||||||| |||||||||    
T  29693688 atcaatattaggtcctagaagaacaaaagagagcagaggaatcaacaaaaaggaagcttaaagcatctgaagagaagtgctcttgaagacaaaaagtgct 29693589  T
Q  193 cctgaagtgatga 205  Q
    |||||||||||||    
T  29693588 cctgaagtgatga 29693576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 86 - 205
Target Start/End: Original strand, 602505 - 602624
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagac 183  Q
    ||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||| || |||||||| |||||||  ||| |||||| |    
T  602505 aaaatttgatatctttattaggttctggaagaacaaaagagagctaaggaatcaacaaaaaggaagtttgaagcgtctaaagagaagcgttgctgaagtc 602604  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
       |||||||||||||||||||    
T  602605 --tagtgctcctgaagtgatga 602624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 39693916 - 39693796
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||||||| |||||||||||| ||||||| |||||||||||| ||||||||||||| |||||||||||| || ||||||||||  | |||||| |    
T  39693916 aaaatttgatatctttattaggttctggaagaacgaaagagagcaaatgaatcaacaaaaaagaagcttaaagcatccgaagagaagtgcttctgaagtc 39693817  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
     ||||||| |||||||||||||    
T  39693816 -aaagtgcacctgaagtgatga 39693796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 16189380 - 16189293
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||| ||| | | |||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  16189380 aaaatttgacatcttaaataggttctggaagaacaaaagagagcaaatgaatcaacaaaaaggaagcttgaagcgtctgaagagaagt 16189293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 17914840 - 17914753
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||  |||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||| |||| |||||||||||||    
T  17914840 aaaatttggaatcattattaggttctggaagaataaaagagagcaaaggaatcaacagaaaggaagcttgaagcatctgaagagaagt 17914753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 22745851 - 22745764
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||| ||| | | |||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22745851 aaaatttgacatcttaaataggttctggaagaacaaaaaagagcaaaggaatcaacaaaaaggaagcttaaagtgtctgaagagaagt 22745764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 105 - 171
Target Start/End: Complemental strand, 21933263 - 21933197
Alignment:
Q  105 aggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa 171  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21933263 aggttctggaagaacaatagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa 21933197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 86 - 203
Target Start/End: Original strand, 17525500 - 17525617
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    |||| |||| |||||||||||| |||  |||||||||||||||||||| |||||||||||| |||| || |||| |||||| ||||||  ||||||||||    
T  17525500 aaaaattgaaatcattattaggatctgaaagaacaaaagagagcaaagaaatcaacaaaaatgaagattgaagcatctgaaaagaagtgctcctgaagac 17525599  T
Q  184 aaaagtgctcctgaagtgat 203  Q
      ||||||||||||||||||    
T  17525600 --aagtgctcctgaagtgat 17525617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 82 - 205
Target Start/End: Complemental strand, 18680184 - 18680060
Alignment:
Q  82 agacaaaatttgatatcattattaggttcttgaagaacaaa-agagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagaga-agttcctga 179  Q
    |||||||||||||||||||||||||||| |  |||| ||||   ||||| |||||||||||||||||||||||| |||| ||||||||||  | ||||||    
T  18680184 agacaaaatttgatatcattattaggttatgaaagagcaaattaagagctaaggaatcaacaaaaaggaagctttaagcatctgaagagagtgctcctga 18680085  T
Q  180 agacaaaagtgctcctgaagtgatga 205  Q
    || | |||||||||||||||||||||    
T  18680084 agtc-aaagtgctcctgaagtgatga 18680060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 17702107 - 17702020
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    |||||||| |||| |||||||||||| ||| ||||||||||||  | |||||||||||||||||||||| |||| |||||||||||||    
T  17702107 aaaatttggtatctttattaggttctggaataacaaaagagagttatggaatcaacaaaaaggaagcttgaagcatctgaagagaagt 17702020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 86 - 173
Target Start/End: Original strand, 18320961 - 18321048
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||||||| |||||| ||||| ||||||||||||| ||| | |||||||||||||| ||||||| |||| |||||||||||||    
T  18320961 aaaatttgatatctttattacgttctggaagaacaaaagatagctatggaatcaacaaaaaagaagcttgaagcatctgaagagaagt 18321048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 124 - 205
Target Start/End: Complemental strand, 33083199 - 33083116
Alignment:
Q  124 gagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagacaaaagtgctcctgaagtgatga 205  Q
    |||||| | |||||||||||||| ||||||||||||||||||||||||||  || ||||| ||||||||||| |||||||||||    
T  33083199 gagagctatggaatcaacaaaaaagaagcttaaagcgtctgaagagaagtgctcttgaagtcaaaagtgctcttgaagtgatga 33083116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 30421239 - 30421292
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaa 166  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  30421239 gaagaacaatagagagcaaaggaattaacaaaaaggaagcttaaagcgtctgaa 30421292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 105 - 167
Target Start/End: Complemental strand, 16207617 - 16207555
Alignment:
Q  105 aggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaag 167  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||| ||| |||| |||||||    
T  16207617 aggttctggaagaacaaaagagagcaaatgaatcaacaaaaaggaatcttgaagcatctgaag 16207555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 205
Target Start/End: Complemental strand, 19943600 - 19943498
Alignment:
Q  104 taggttcttgaagaacaaaagagagcaaaggaatcaa-caaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagacaaaagtgctcctgaagt 200  Q
    |||||||| |||||||||||||||| || |||||||| |||||| ||||||| |||| |||||||||||||  ||||||||   | ||||||||||||||    
T  19943600 taggttctagaagaacaaaagagagtaatggaatcaaccaaaaaagaagcttgaagcatctgaagagaagtgctcctgaag--tatagtgctcctgaagt 19943503  T
Q  201 gatga 205  Q
    |||||    
T  19943502 gatga 19943498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 82 - 170
Target Start/End: Complemental strand, 18719352 - 18719263
Alignment:
Q  82 agacaaaatttgatatcattattaggttcttgaagaacaaa-agagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagaga 170  Q
    |||||||| ||||||||||||||||||| |  |||| ||||   ||||| |||||||||||||||||||||||| |||| ||||||||||    
T  18719352 agacaaaaattgatatcattattaggttatgaaagagcaaattaagagctaaggaatcaacaaaaaggaagctttaagcatctgaagaga 18719263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 21541343 - 21541287
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaag-gaagcttaaagcgtctgaaga 168  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||    
T  21541343 gaagaacaaaagagagcaaaggaatcaacaaaaagagaagcctaaagcatctgaaga 21541287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 22461418 - 22461482
Alignment:
Q  104 taggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    ||||||||  |||||||||||||||||| ||||||||||| |||||||||| || ||||||||||    
T  22461418 taggttctgtaagaacaaaagagagcaatggaatcaacaagaaggaagcttgaaacgtctgaaga 22461482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 168
Target Start/End: Original strand, 15335807 - 15335894
Alignment:
Q  82 agacaaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaa-ggaagcttaaagcgtctgaaga 168  Q
    ||||||||||||||||| | |  ||||  | ||||||||| | |||||||||||||||||||||| |||||||||||| |||||||||    
T  15335807 agacaaaatttgatatcttaaaaaggtcttggaagaacaataaagagcaaaggaatcaacaaaaagggaagcttaaagtgtctgaaga 15335894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 168
Target Start/End: Original strand, 15424872 - 15424959
Alignment:
Q  82 agacaaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaa-ggaagcttaaagcgtctgaaga 168  Q
    ||||||||||||||||| | |  ||||  | ||||||||| | |||||||||||||||||||||| |||||||||||| |||||||||    
T  15424872 agacaaaatttgatatcttaaaaaggtcttggaagaacaataaagagcaaaggaatcaacaaaaagggaagcttaaagtgtctgaaga 15424959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 168
Target Start/End: Original strand, 15516176 - 15516263
Alignment:
Q  82 agacaaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaa-ggaagcttaaagcgtctgaaga 168  Q
    ||||||||||||||||| | |  ||||  | ||||||||| | |||||||||||||||||||||| |||||||||||| |||||||||    
T  15516176 agacaaaatttgatatcttaaaaaggtcttggaagaacaataaagagcaaaggaatcaacaaaaagggaagcttaaagtgtctgaaga 15516263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 23185039 - 23185094
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    ||||||||| |||||||||| |||  ||||||||||||||||||||||||||||||    
T  23185039 gaagaacaatagagagcaaatgaactaacaaaaaggaagcttaaagcgtctgaaga 23185094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 168
Target Start/End: Original strand, 24832820 - 24832907
Alignment:
Q  82 agacaaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaa-ggaagcttaaagcgtctgaaga 168  Q
    ||||||||||||||||| | |  ||||  | ||||||||| | ||||||||| |||||||||||| ||||||||||||||||||||||    
T  24832820 agacaaaatttgatatcttaaaaaggtcttggaagaacaataaagagcaaagaaatcaacaaaaagggaagcttaaagcgtctgaaga 24832907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 205
Target Start/End: Complemental strand, 19707865 - 19707764
Alignment:
Q  104 taggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagacaaaagtgctcctgaagtg 201  Q
    |||||| | |||||||||| ||| |||| |||||||||||||||||||||| |||  |||||||| ||||  ||||||||    ||||||||||||||||    
T  19707865 taggttatggaagaacaaatgagggcaatggaatcaacaaaaaggaagcttgaagaatctgaagaaaagtgctcctgaag--ttaagtgctcctgaagtg 19707768  T
Q  202 atga 205  Q
    ||||    
T  19707767 atga 19707764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 1238023 - 1237967
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaa-ggaagcttaaagcgtctgaaga 168  Q
    ||||||||| | |||||||||||||||||||||| ||||||||||||| ||||||||    
T  1238023 gaagaacaataaagagcaaaggaatcaacaaaaagggaagcttaaagcatctgaaga 1237967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 205
Target Start/End: Complemental strand, 2811168 - 2811083
Alignment:
Q  120 aaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaagtgatga 205  Q
    |||| ||||||||| ||||||||||| ||||||||||||| |||||||||||  |||| ||||||| | || ||||||||||||||||    
T  2811168 aaaaaagagcaaagaaatcaacaaaa-ggaagcttaaagcatctgaagagaagtgttcatgaagac-atagcgctcctgaagtgatga 2811083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 9320941 - 9320885
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaa-ggaagcttaaagcgtctgaaga 168  Q
    ||||||||| | |||||||||||||||||||||| ||||| ||||||||||||||||    
T  9320941 gaagaacaataaagagcaaaggaatcaacaaaaagggaagattaaagcgtctgaaga 9320885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 45538251 - 45538307
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaa-ggaagcttaaagcgtctgaaga 168  Q
    ||||||||| | ||||||||| |||||||||||| ||||||||||||||||||||||    
T  45538251 gaagaacaataaagagcaaagaaatcaacaaaaagggaagcttaaagcgtctgaaga 45538307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 24646718 - 24646631
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||| ||| | | |||||| | ||||||||||||| | ||| |||||||||||||||||||||| |||| |||  ||||||||    
T  24646718 aaaatttgacatcttaaataggttttggaagaacaaaagataccaatggaatcaacaaaaaggaagcttgaagcatctagagagaagt 24646631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 19927400 - 19927344
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaa-ggaagcttaaagcgtctgaaga 168  Q
    ||||||||| | |||||||||||| ||||||||| ||||||||||||||||| ||||    
T  19927400 gaagaacaataaagagcaaaggaaccaacaaaaagggaagcttaaagcgtctaaaga 19927344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 28903836 - 28903780
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaag-gaagcttaaagcgtctgaaga 168  Q
    ||||||||||||||||||||||||||||||| ||| ||| | |||||| ||||||||    
T  28903836 gaagaacaaaagagagcaaaggaatcaacaagaagagaaacctaaagcatctgaaga 28903780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 40003562 - 40003506
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaag-gaagcttaaagcgtctgaaga 168  Q
    ||||||||||||||||||||||||||||||| ||| ||| | |||||| ||||||||    
T  40003562 gaagaacaaaagagagcaaaggaatcaacaagaagagaaacctaaagcatctgaaga 40003506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 14989277 - 14989343
Alignment:
Q  136 atcaacaaaaa-ggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaag 199  Q
    ||||||||||| |||||||||||||||||||||| ||  | ||||||||  ||||||||||||||||    
T  14989277 atcaacaaaaatggaagcttaaagcgtctgaagaaaactgctcctgaagttaaaagtgctcctgaag 14989343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 205
Target Start/End: Original strand, 19956142 - 19956241
Alignment:
Q  107 gttcttgaagaacaaaagagagcaaa-ggaatcaacaaaaaggaagcttaaagcgtctgaagagaag--ttcctgaagacaaaagtgctcctgaagtgat 203  Q
    ||||| |||||||||| ||||||||  ||||||||||| |||||| ||| ||||||||||| | |||   | ||||||||  ||||||||||||||||||    
T  19956142 gttctggaagaacaaatgagagcaattggaatcaacaagaaggaaacttgaagcgtctgaaaaaaagatgttctgaagac--aagtgctcctgaagtgat 19956239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 143
Target Start/End: Original strand, 17518842 - 17518872
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaa 143  Q
    |||||||||||||||||||||||||||||||    
T  17518842 gaagaacaaaagagagcaaaggaatcaacaa 17518872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 18722419 - 18722489
Alignment:
Q  104 taggttcttgaagaacaaaaga-gagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    |||||||| ||||||||||  | |||||| ||||||||||||||| |||||| |||||| |||||| ||||    
T  18722419 taggttctggaagaacaaattaagagcaatggaatcaacaaaaagaaagcttgaagcgtatgaagaaaagt 18722489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 147
Target Start/End: Original strand, 23263389 - 23263431
Alignment:
Q  105 aggttcttgaagaacaaaagagagcaaaggaatcaacaaaaag 147  Q
    ||||||| ||||||||||||||||||| | |||||||||||||    
T  23263389 aggttctcgaagaacaaaagagagcaatgaaatcaacaaaaag 23263431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 154
Target Start/End: Complemental strand, 23772722 - 23772680
Alignment:
Q  112 tgaagaacaaaagagagcaaaggaatcaacaaaaaggaagctt 154  Q
    ||||||||||| |||||||| |||||| |||||||||||||||    
T  23772722 tgaagaacaaatgagagcaatggaatctacaaaaaggaagctt 23772680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 3598126 - 3598182
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaa-aaggaagcttaaagcgtctgaaga 168  Q
    ||||||||| | ||| |||||||||||||||| | |||| |||||||||||||||||    
T  3598126 gaagaacaatacagaacaaaggaatcaacaaagagggaaacttaaagcgtctgaaga 3598182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 141
Target Start/End: Complemental strand, 8032385 - 8032357
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaac 141  Q
    |||||||||||||||||||||||||||||    
T  8032385 gaagaacaaaagagagcaaaggaatcaac 8032357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 141
Target Start/End: Original strand, 18534847 - 18534875
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaac 141  Q
    |||||||||||||||||||||||||||||    
T  18534847 gaagaacaaaagagagcaaaggaatcaac 18534875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 173
Target Start/End: Original strand, 18685221 - 18685269
Alignment:
Q  125 agagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||| ||||||||||||||| |||||| |||||| |||||| ||||    
T  18685221 agagcaatggaatcaacaaaaagaaagcttgaagcgtatgaagaaaagt 18685269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 173
Target Start/End: Original strand, 18730786 - 18730834
Alignment:
Q  125 agagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||| ||||||||||||||| |||||| |||||| |||||| ||||    
T  18730786 agagcaatggaatcaacaaaaagaaagcttgaagcgtatgaagaaaagt 18730834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 168
Target Start/End: Complemental strand, 18772983 - 18772927
Alignment:
Q  112 tgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    ||||||||||| |||||||| |||||| ||||||||||| ||| |||| | ||||||    
T  18772983 tgaagaacaaatgagagcaatggaatctacaaaaaggaaacttgaagcatttgaaga 18772927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 2e-39; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 82 - 205
Target Start/End: Complemental strand, 20646547 - 20646423
Alignment:
Q  82 agacaaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctga 179  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||  ||||||    
T  20646547 agacaaaatttgatatcattattaggttctagaagaacaaaagagagcaaaggaatcaacaaaatggaagcttaaagcgtttgaagagaagtgctcctga 20646448  T
Q  180 agacaaaagtgctcctgaagtgatga 205  Q
    || | |||||| || |||||||||||    
T  20646447 agtc-aaagtgttcatgaagtgatga 20646423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 86 - 209
Target Start/End: Complemental strand, 41495362 - 41495238
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  | |||||| |    
T  41495362 aaaatttggaatcattattaggttctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcatctgaagagaagtgcttctgaagtc 41495263  T
Q  184 aaaagtgctcctgaagtgatgatgtc 209  Q
     ||||||||| |||||||||||||||    
T  41495262 -aaagtgctcatgaagtgatgatgtc 41495238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 86 - 205
Target Start/End: Original strand, 17238725 - 17238844
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    |||| |||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||| |    
T  17238725 aaaacttgatatctttattaggttctttaagaacaaaagagagctaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagtgctcctgaagtc 17238824  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
      ||||||| ||||||||||||    
T  17238825 --aagtgcttctgaagtgatga 17238844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 13948724 - 13948604
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||  |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  || ||||| |    
T  13948724 aaaatttggaatcattattaggttctggaaaaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcatctgaagagaagtgctcttgaagtc 13948625  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
    |||| ||||| |||||||||||    
T  13948624 aaaa-tgctcatgaagtgatga 13948604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 86 - 205
Target Start/End: Original strand, 14392777 - 14392897
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||| ||||||||||| |||| |||||||||||||  ||||||||      
T  14392777 aaaatttgatatctttattaggttctggaagaacaaaagagagctaaggaatcaacagaaaggaagcttgaagcatctgaagagaagtgctcctgaag-t 14392875  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
     |||||||||||||||||||||    
T  14392876 taaagtgctcctgaagtgatga 14392897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 15903587 - 15903467
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||  |||| ||| |    
T  15903587 aaaatttgatatctttattaggttctggaagaacaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctccttaagtc 15903488  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
     |||||||| ||||||||||||    
T  15903487 -aaagtgcttctgaagtgatga 15903467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 82 - 205
Target Start/End: Original strand, 16658408 - 16658538
Alignment:
Q  82 agacaaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaa-----aaaggaagcttaaagcgtctgaagagaagt--t 174  Q
    |||||||||||||||||||||| || |||| ||||||||||| ||||||||||||| || ||     ||||||||||||||||||||||||||||||  |    
T  16658408 agacaaaatttgatatcattatgagtttctggaagaacaaaatagagcaaaggaataaaaaaaaaataaaggaagcttaaagcgtctgaagagaagtgct 16658507  T
Q  175 cctgaagacaaaagtgctcctgaagtgatga 205  Q
    ||||||||||||| ||||| |||||||||||    
T  16658508 cctgaagacaaaaatgctcatgaagtgatga 16658538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 113 - 205
Target Start/End: Original strand, 47405249 - 47405343
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaagtgatga 205  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||  | ||||||||||||||||||||||||||| ||||    
T  47405249 gaagaacaatagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagaaaactgctcctgaagacaaaagtgctcctgaagtaatga 47405343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 31303777 - 31303657
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||| ||| | | ||| |||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||  |||||||| |    
T  31303777 aaaatttgacatcttaaatagtttctggaagaacaaaagagagcaaaagaatcaacaaaaaggaagcttaaagcatctgaagagaagtgctcctgaagtc 31303678  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
     |||||||||||||||||||||    
T  31303677 -aaagtgctcctgaagtgatga 31303657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 86 - 173
Target Start/End: Original strand, 12962872 - 12962959
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    |||| ||||||||||||||||||||| ||||||||||||||  | |||||||||||||||||||||||| ||||||||||||||||||    
T  12962872 aaaaattgatatcattattaggttctggaagaacaaaagaggactaaggaatcaacaaaaaggaagcttgaagcgtctgaagagaagt 12962959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 86 - 173
Target Start/End: Original strand, 49642550 - 49642637
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||  |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||    
T  49642550 aaaatttggaatcattattaggttctggaagaacaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaagagaagt 49642637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 105 - 205
Target Start/End: Complemental strand, 52920774 - 52920673
Alignment:
Q  105 aggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagacaaaagtgctcctgaagtga 202  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||  ||||||||  |||||||||||||||||||    
T  52920774 aggttctggaagaacaaaagagagctaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaag-taaaagtgctcctgaagtga 52920676  T
Q  203 tga 205  Q
    |||    
T  52920675 tga 52920673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 86 - 173
Target Start/End: Original strand, 22803872 - 22803959
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||| || | | |||||||||||    
T  22803872 aaaatttgatatctttattaggttctagaagaacaaaagagagcaatggaatcaacaaaaaggaagcttgaaacatttgaagagaagt 22803959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 37467690 - 37467570
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||| ||||||| ||||||||||||  |||||||||||||| ||| |||||||||||||||||||||| |||| |||||||| ||||  |||||||| |    
T  37467690 aaaatgtgatatctttattaggttctgaaagaacaaaagagaacaatggaatcaacaaaaaggaagcttgaagcatctgaagataagtgctcctgaagtc 37467591  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
     |||| ||||||||||||||||    
T  37467590 -aaagagctcctgaagtgatga 37467570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 113 - 205
Target Start/End: Complemental strand, 14969675 - 14969581
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaagtgatga 205  Q
    |||||||||| ||||||||| ||||||||||||||||| ||| |||| |||||||||||  | |||| |||||||||||||||||||||||||||    
T  14969675 gaagaacaaacgagagcaaatgaatcaacaaaaaggaatcttgaagcatctgaagagaatcgctccttaagacaaaagtgctcctgaagtgatga 14969581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 105 - 201
Target Start/End: Complemental strand, 28582476 - 28582379
Alignment:
Q  105 aggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaagtg 201  Q
    ||||||| ||||||||| |||||| |||| ||||||||||||||||||||||| |||||||||||||  | |||||||||| |||||||||||||||||    
T  28582476 aggttctggaagaacaatagagagtaaagaaatcaacaaaaaggaagcttaaaacgtctgaagagaactgctcctgaagac-aaagtgctcctgaagtg 28582379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 113 - 199
Target Start/End: Complemental strand, 47208071 - 47207984
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaag 199  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||  | |||||||||| |||||||||||||||    
T  47208071 gaagaacaatagagagcaaatgaatcaacaaaaaggaagcttaaagcgtctgaagaaaactgctcctgaagac-aaagtgctcctgaag 47207984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 18121411 - 18121504
Alignment:
Q  105 aggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctga 197  Q
    ||||||| ||||||||| |||||||||| ||| ||||||||| ||||||||||||||||||||||||  | |||||||||| |||||||||||||    
T  18121411 aggttctggaagaacaatagagagcaaatgaagcaacaaaaatgaagcttaaagcgtctgaagagaactgctcctgaagac-aaagtgctcctga 18121504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 105 - 205
Target Start/End: Complemental strand, 13824403 - 13824300
Alignment:
Q  105 aggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaa--gcgtctgaagagaagt--tcctgaagacaaaagtgctcctgaagt 200  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||| ||  ||  ||||||||||||  ||||||||  |||||||||||||||||    
T  13824403 aggttctggaagaacaaaagagagcaatggaatcaacaaaaaggaagcttgaagtgctcctgaagagaagtgctcctgaag-taaaagtgctcctgaagt 13824305  T
Q  201 gatga 205  Q
    |||||    
T  13824304 gatga 13824300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 82 - 168
Target Start/End: Complemental strand, 50300610 - 50300524
Alignment:
Q  82 agacaaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    ||||||||||||| ||| | |  ||||| | ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  50300610 agacaaaatttgacatcttaaaaaggttttggaagaacaataaagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 50300524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 20627277 - 20627330
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaa 166  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  20627277 gaagaacaatagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaa 20627330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 6091120 - 6091033
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||| ||| | | |||||||| ||||||||||||||||||| | |||||||||||| ||||||| |||| |||||||||||||    
T  6091120 aaaatttgacatcttaaataggttctggaagaacaaaagagagcaatgaaatcaacaaaaatgaagcttgaagcatctgaagagaagt 6091033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 125 - 201
Target Start/End: Complemental strand, 11223896 - 11223819
Alignment:
Q  125 agagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaagtg 201  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||  | |||||||||| |||||||||||||||||    
T  11223896 agagcaaaggaatcaacaaaaaggaagtttaaagcatctgaagagaactgctcctgaagac-aaagtgctcctgaagtg 11223819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 16032868 - 16032781
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    |||||||| |||| |||||||||||  ||||||||||||||||||  |||||||||||||| ||||||| |||| |||||||| ||||    
T  16032868 aaaatttggtatctttattaggttccggaagaacaaaagagagcattggaatcaacaaaaatgaagcttgaagcatctgaagaaaagt 16032781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 2561520 - 2561446
Alignment:
Q  128 gcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaagtg 201  Q
    ||||| ||||||||||||||||||||||||||||||||||||||  | |||||||||| ||||||||| |||||||    
T  2561520 gcaaatgaatcaacaaaaaggaagcttaaagcgtctgaagagaactgctcctgaagac-aaagtgctcttgaagtg 2561446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 113 - 173
Target Start/End: Complemental strand, 40800187 - 40800127
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    |||||| || ||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  40800187 gaagaataatagagagcaaagaaatcaacaaaaaggaagcttaaagcgtctgaagaaaagt 40800127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 11869447 - 11869392
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||    
T  11869447 gaagaacaataaagagcaaaggaatcaacaaaaaggaagcttaaagcgtctaaaga 11869392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 11908763 - 11908819
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaag-gaagcttaaagcgtctgaaga 168  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||    
T  11908763 gaagaacaaaagagagcaaaggaatcaacaaaaagagaagcctaaagcatctgaaga 11908819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 205
Target Start/End: Original strand, 29951209 - 29951329
Alignment:
Q  86 aaaatttgatatcatt-attaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaaga 182  Q
    ||||||||||||| || ||||||| || ||||||||||||||||| ||| | |||||||||||||||||| |||| |||| |||  |||  | ||||||     
T  29951209 aaaatttgatatcttttattaggtcctggaagaacaaaagagagctaagaagtcaacaaaaaggaagcttgaagcatctgtagaatagtgctactgaagt 29951308  T
Q  183 caaaagtgctcctgaagtgatga 205  Q
    |  ||||||||||||||||||||    
T  29951309 c--aagtgctcctgaagtgatga 29951329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 205
Target Start/End: Original strand, 30000363 - 30000483
Alignment:
Q  86 aaaatttgatatcatt-attaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaaga 182  Q
    ||||||||||||| || ||||||| || ||||||||||||||||| ||| | |||||||||||||||||| |||| |||| |||  |||  | ||||||     
T  30000363 aaaatttgatatcttttattaggtcctggaagaacaaaagagagctaagaagtcaacaaaaaggaagcttgaagcatctgtagaatagtgctactgaagt 30000462  T
Q  183 caaaagtgctcctgaagtgatga 205  Q
    |  ||||||||||||||||||||    
T  30000463 c--aagtgctcctgaagtgatga 30000483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 201
Target Start/End: Original strand, 53056525 - 53056615
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaa-ggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaagtg 201  Q
    ||||||||| | | |||||||||||||||||||| ||||||||||||||| |||||| ||  | |||||||||| |||||||||||||||||    
T  53056525 gaagaacaataaaaagcaaaggaatcaacaaaaagggaagcttaaagcgtttgaagaaaactgctcctgaagac-aaagtgctcctgaagtg 53056615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 168
Target Start/End: Original strand, 24775269 - 24775354
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaag--agagcaaaggaatcaacaaaaa-ggaagcttaaagcgtctgaaga 168  Q
    ||||||||||||| | |  |||| || ||||||||||||  |||||||||||||||||||||| ||||||||||||||| ||||||    
T  24775269 aaaatttgatatcttaaaaaggtactggaagaacaaaagtaagagcaaaggaatcaacaaaaatggaagcttaaagcgtttgaaga 24775354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 167
Target Start/End: Original strand, 49553259 - 49553341
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaag-agagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaag 167  Q
    ||||||||| ||| | | || ||||| ||||||||| || |||||||| ||||||||||||||||||||| ||||||||||||    
T  49553259 aaaatttgacatcttaaataagttctggaagaacaacaggagagcaaatgaatcaacaaaaaggaagcttgaagcgtctgaag 49553341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 205
Target Start/End: Original strand, 16199601 - 16199702
Alignment:
Q  104 taggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagacaaaagtgctcctgaagtg 201  Q
    |||||||| || ||||||| |||||||| ||||||||||| || ||||||| |||| |||||||| ||||  |||||||| |  ||||||||||||| ||    
T  16199601 taggttctggaggaacaaatgagagcaatggaatcaacaagaaagaagcttgaagcatctgaagaaaagtgctcctgaagtc--aagtgctcctgaactg 16199698  T
Q  202 atga 205  Q
    ||||    
T  16199699 atga 16199702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 12752399 - 12752455
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaag-gaagcttaaagcgtctgaaga 168  Q
    |||||||||||||||||||| |||||||||||||| ||||| |||||| ||||||||    
T  12752399 gaagaacaaaagagagcaaaagaatcaacaaaaagagaagcctaaagcatctgaaga 12752455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 168
Target Start/End: Original strand, 26417488 - 26417544
Alignment:
Q  112 tgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    ||||||||||| |||||||| ||||||||||| |||||||||| |||| ||||||||    
T  26417488 tgaagaacaaatgagagcaatggaatcaacaagaaggaagcttgaagcatctgaaga 26417544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 29855788 - 29855732
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaa-ggaagcttaaagcgtctgaaga 168  Q
    ||||||||| | ||| |||||||||||||||||| ||||||||||||||||||||||    
T  29855788 gaagaacaataaagaacaaaggaatcaacaaaaagggaagcttaaagcgtctgaaga 29855732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 168
Target Start/End: Complemental strand, 14955851 - 14955764
Alignment:
Q  82 agacaaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaagg-aagcttaaagcgtctgaaga 168  Q
    ||||||||||||||||| | |  ||||  | ||||||||| | ||||||||| ||| |||||||||| ||||||||||||||||||||    
T  14955851 agacaaaatttgatatcttaaaaaggtcttggaagaacaataaagagcaaagaaattaacaaaaagggaagcttaaagcgtctgaaga 14955764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 171
Target Start/End: Original strand, 12726034 - 12726119
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa 171  Q
    ||||||||| ||| | | |||||||| ||||||||||||||| | || ||||||| ||||||||||||| |||  ||| |||||||    
T  12726034 aaaatttgacatcttaaataggttctggaagaacaaaagagatctaaagaatcaataaaaaggaagcttgaaggatctaaagagaa 12726119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 19249202 - 19249271
Alignment:
Q  104 taggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    |||||||| |||||||||| |||||||  ||||||||||| || ||||||| |||| |||||||| ||||    
T  19249202 taggttctggaagaacaaatgagagcactggaatcaacaagaatgaagcttgaagcatctgaagaaaagt 19249271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 13148640 - 13148584
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaag-gaagcttaaagcgtctgaaga 168  Q
    ||||||||||||||||||||||||||||||| ||| ||| | |||||| ||||||||    
T  13148640 gaagaacaaaagagagcaaaggaatcaacaagaagagaaacctaaagcatctgaaga 13148584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 168
Target Start/End: Complemental strand, 22141093 - 22141049
Alignment:
Q  125 agagcaaaggaatcaacaaaaa-ggaagcttaaagcgtctgaaga 168  Q
    |||||||||||||||||||||| |||||||||||| |||||||||    
T  22141093 agagcaaaggaatcaacaaaaagggaagcttaaagtgtctgaaga 22141049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 168
Target Start/End: Complemental strand, 22151616 - 22151564
Alignment:
Q  117 aacaaaagagagcaaaggaatcaacaaaaag-gaagcttaaagcgtctgaaga 168  Q
    ||||||||||||||||||||||||||||||| ||| | |||||| ||||||||    
T  22151616 aacaaaagagagcaaaggaatcaacaaaaagagaaacctaaagcatctgaaga 22151564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 33583623 - 33583579
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaa 157  Q
    ||||||||| | ||||||||||||||||||||||||||| |||||    
T  33583623 gaagaacaataaagagcaaaggaatcaacaaaaaggaagtttaaa 33583579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 33598243 - 33598199
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaa 157  Q
    ||||||||| | ||||||||||||||||||||||||||| |||||    
T  33598243 gaagaacaataaagagcaaaggaatcaacaaaaaggaagtttaaa 33598199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 46349625 - 46349681
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaa-ggaagcttaaagcgtctgaaga 168  Q
    ||||||||| | |||||||||||||||||||||| ||||||||||||| | ||||||    
T  46349625 gaagaacaataaagagcaaaggaatcaacaaaaagggaagcttaaagcatatgaaga 46349681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 14073051 - 14073004
Alignment:
Q  107 gttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagctt 154  Q
    ||||| |||||||||| |||||||| |||||| |||||||||||||||    
T  14073051 gttctggaagaacaaatgagagcaatggaatctacaaaaaggaagctt 14073004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 8728815 - 8728865
Alignment:
Q  104 taggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagctt 154  Q
    |||||||| |||||||||| |||||||| |||||  |||||||||||||||    
T  8728815 taggttctggaagaacaaatgagagcaatggaatttacaaaaaggaagctt 8728865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 9080702 - 9080752
Alignment:
Q  104 taggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagctt 154  Q
    |||||||| |||||||||| |||||||| |||||  |||||||||||||||    
T  9080702 taggttctggaagaacaaatgagagcaatggaatttacaaaaaggaagctt 9080752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 14077174 - 14077223
Alignment:
Q  104 taggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagctt 154  Q
    ||||||||||||||||||| |||||||| |||||| || ||||||||||||    
T  14077174 taggttcttgaagaacaaatgagagcaacggaatctac-aaaaggaagctt 14077223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 51341411 - 51341357
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaag-gaagcttaaagcgtctgaa 166  Q
    |||||||||||||||||||| |||| ||||||||| ||||| |||||| ||||||    
T  51341411 gaagaacaaaagagagcaaaagaattaacaaaaagagaagcctaaagcatctgaa 51341357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 143
Target Start/End: Original strand, 51988805 - 51988835
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaa 143  Q
    |||||||||||||||||||||||||||||||    
T  51988805 gaagaacaaaagagagcaaaggaatcaacaa 51988835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 12388676 - 12388729
Alignment:
Q  115 agaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    |||||| | |||||||| ||||||||||| |||||||||| |||| ||||||||    
T  12388676 agaacatatgagagcaatggaatcaacaagaaggaagcttgaagcatctgaaga 12388729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 154
Target Start/End: Original strand, 38177479 - 38177527
Alignment:
Q  105 aggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagctt 154  Q
    ||||||| |||||| |||| |||||||| |||||||||||||||||||||    
T  38177479 aggttctggaagaaaaaaa-agagcaaatgaatcaacaaaaaggaagctt 38177527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 12968709 - 12968646
Alignment:
Q  104 taggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    |||||||| |||||||||| ||| | || ||||||||||| |||||||||| ||| |||||||||    
T  12968709 taggttctagaagaacaaatgagggtaatggaatcaacaagaaggaagcttgaag-gtctgaaga 12968646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 9e-39; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 86 - 200
Target Start/End: Complemental strand, 19086539 - 19086424
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||  |||||||| |    
T  19086539 aaaatttgatatcattattaggttctggaagaacaaaagagagctaaggaatcaacaaaaaggaagcttgaagcgtctgaagagaagtgctcctgaagtc 19086440  T
Q  184 aaaagtgctcctgaagt 200  Q
     ||||||||||||||||    
T  19086439 -aaagtgctcctgaagt 19086424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 9718232 - 9718112
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||| |||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||    
T  9718232 aaaatttgagatcatcgttaggttctagaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaactactcctgaagac 9718133  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
     ||||||||| |||||||||||    
T  9718132 -aaagtgctcttgaagtgatga 9718112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 19624351 - 19624231
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||  |||||||| |    
T  19624351 aaaatttgatatcattattaggttctggaagaacaaaagagagctaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagtc 19624252  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
     ||||||||||| |||||||||    
T  19624251 -aaagtgctcctaaagtgatga 19624231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 24117217 - 24117097
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    |||||||||||| ||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||  |||||||| |    
T  24117217 aaaatttgatattattattaggttatggaagaacaaaagagagctaaggaatcaacaaaaaggaagcttaaagcatctgaagagaagtgctcctgaagtc 24117118  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
     |||||||||||||||||||||    
T  24117117 -aaagtgctcctgaagtgatga 24117097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 96 - 205
Target Start/End: Complemental strand, 15302550 - 15302438
Alignment:
Q  96 atcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac-aaaagtgct 192  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||| |||| ||||| ||||||||||||||||  |||||||||| |||||||||    
T  15302550 atcattattaggttctagaagaaaaaaagagagcaaaggaatcaacaaaatggaaacttaaggcgtctgaagagaagtgctcctgaagacaaaaagtgct 15302451  T
Q  193 cctgaagtgatga 205  Q
    |||||||||||||    
T  15302450 cctgaagtgatga 15302438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 105 - 205
Target Start/End: Original strand, 34451463 - 34451565
Alignment:
Q  105 aggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaagtga 202  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||  | ||||||||||||||||||| |||||||||    
T  34451463 aggttctggaagaacaaaagagagcaaaggaatcagcaaaaaggaagcttgaagcatctgaagagaagcgctcctgaagacaaaagtgcttctgaagtga 34451562  T
Q  203 tga 205  Q
    |||    
T  34451563 tga 34451565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 86 - 205
Target Start/End: Original strand, 12715195 - 12715315
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||  ||||||||||||  || ||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||  ||||||||||    
T  12715195 aaaatttggaatcattattaggacctggaagaacaaaagagagcaaagaaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagac 12715294  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
    ||||||| ||| ||||||||||    
T  12715295 aaaagtgttcc-gaagtgatga 12715315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 13602544 - 13602457
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||  |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||    
T  13602544 aaaatttggaatcattattaggttctggaagaacaaaagagagaaaaggaatcaacaaaaaggaagcttaaaccgtttgaagagaagt 13602457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 105 - 205
Target Start/End: Complemental strand, 21625468 - 21625366
Alignment:
Q  105 aggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaagtga 202  Q
    ||||||| |||||||||||||||| ||| ||||||||||| ||||||||| |||| |||||||||||  | | |||||||||||||||||||||||||||    
T  21625468 aggttctcgaagaacaaaagagagaaaatgaatcaacaaataggaagcttgaagcatctgaagagaagcgcttctgaagacaaaagtgctcctgaagtga 21625369  T
Q  203 tga 205  Q
    |||    
T  21625368 tga 21625366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 25597851 - 25597764
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||  |||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||| ||||| |||||||||||||    
T  25597851 aaaatttggaatcattattaggttctagaagaataaaagagagcaatggaatcaacaaaaaggaagctaaaagcatctgaagagaagt 25597764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 13435921 - 13435801
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||| ||| | | ||||||||  |||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||  |||| |||      
T  13435921 aaaatttgacatcttaaataggttctgaaagaacaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctaaag-t 13435823  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
    ||||||||||||||||||||||    
T  13435822 aaaagtgctcctgaagtgatga 13435801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 113 - 199
Target Start/End: Complemental strand, 32544630 - 32544543
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaag 199  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||| ||||||||| |||||    
T  32544630 gaagaacaatagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaactgctcctgaagac-aaagtgctcttgaag 32544543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 89 - 209
Target Start/End: Complemental strand, 23284949 - 23284829
Alignment:
Q  89 atttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagacaaa 186  Q
    |||||||||| ||||||| |||| ||||||||||||||| | | |||||||||||||||||||||| || | |||||||||||||  |||||||| |  |    
T  23284949 atttgatatctttattagcttctggaagaacaaaagagaactatggaatcaacaaaaaggaagcttgaaacatctgaagagaagtgctcctgaagtc--a 23284852  T
Q  187 agtgctcctgaagtgatgatgtc 209  Q
    |||||| ||||||||||||||||    
T  23284851 agtgcttctgaagtgatgatgtc 23284829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 15987583 - 15987496
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||||||| ||||||||||||  || ||||||||||||| |||||||||||||||||||||||| |||| |||||||| ||||    
T  15987583 aaaatttgatatcgttattaggttctgaaaaaacaaaagagagctaaggaatcaacaaaaaggaagcttgaagcatctgaagaaaagt 15987496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 18378642 - 18378555
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||  |||||||||||||  | |||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||    
T  18378642 aaaatttggaatcattattaggtcttggaagaacaaaagagagtaaaggaatcaacaaaaaggaagcttaaaacgtcttaagagaagt 18378555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 113 - 200
Target Start/End: Complemental strand, 21235459 - 21235371
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaagt 200  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||  | |||||||||| ||||||||||||||||    
T  21235459 gaagaacaatagagagcaaaggaatctacaaaaaggaagcttaaagcgtctgaagaaaactgctcctgaagac-aaagtgctcctgaagt 21235371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 107 - 205
Target Start/End: Original strand, 15531404 - 15531504
Alignment:
Q  107 gttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaagtgatg 204  Q
    ||||| ||| ||||||| |||||||| |||||||||||||| ||||||||||| |||||||||||  | ||||| ||||||||||| |||||||||||||    
T  15531404 gttctggaataacaaaaaagagcaaatgaatcaacaaaaagaaagcttaaagcatctgaagagaagcgctcctgtagacaaaagtgatcctgaagtgatg 15531503  T
Q  205 a 205  Q
    |    
T  15531504 a 15531504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 86 - 158
Target Start/End: Complemental strand, 18384027 - 18383955
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaag 158  Q
    ||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||||    
T  18384027 aaaatttggaatcattattaggttctggaagaacaaaagagagcaaaggaatcaacaaaaaagaagtttaaag 18383955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 113 - 198
Target Start/End: Complemental strand, 18435936 - 18435850
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaa 198  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||  | |||||||||| ||||||||||||||    
T  18435936 gaagaacaatagagagaaaaggaatcaacaaaaaggaagcttaaagcatctgaagagaactgctcctgaagac-aaagtgctcctgaa 18435850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 86 - 170
Target Start/End: Complemental strand, 19689105 - 19689021
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagaga 170  Q
    ||||||||| ||| | | |||||||| |||||||||||||||||||| |||||||||||||||||| || |||||||||||||||    
T  19689105 aaaatttgacatcttaaataggttctggaagaacaaaagagagcaaatgaatcaacaaaaaggaagtttgaagcgtctgaagaga 19689021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 86 - 173
Target Start/End: Original strand, 14100233 - 14100320
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||||||  | | |||||||| ||||||||||||||||||| |||||||||||||||||||||| |||| |||| ||||||||    
T  14100233 aaaatttgatatattaaataggttctggaagaacaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctggagagaagt 14100320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 86 - 173
Target Start/End: Original strand, 20112474 - 20112561
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||||||| |||||||||||| ||||||||| |||| || | |||||||||||||||||||||| |||| ||| |||||||||    
T  20112474 aaaatttgatatctttattaggttctggaagaacaagagagggctatggaatcaacaaaaaggaagcttgaagcatctaaagagaagt 20112561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 105 - 171
Target Start/End: Original strand, 26971989 - 26972055
Alignment:
Q  105 aggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa 171  Q
    ||||||| |||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  26971989 aggttctggaagaacaatggagagcaaaggaatcaacaaaaaggaatcttaaagcgtctgaagagaa 26972055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 114 - 201
Target Start/End: Original strand, 16264954 - 16265042
Alignment:
Q  114 aagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaagtg 201  Q
    |||||||| |||||||||||||||||||||||||||| | |||||| |||||||| ||  | |||||||||| |||||||||||||||||    
T  16264954 aagaacaatagagagcaaaggaatcaacaaaaaggaatcctaaagcatctgaagaaaactgctcctgaagac-aaagtgctcctgaagtg 16265042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 113 - 200
Target Start/End: Original strand, 20730507 - 20730595
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaagt 200  Q
    ||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||| ||  | || ||||||| ||||||||||||||||    
T  20730507 gaagaacaatagagagcaaagaaatcaacaaaaaggaagctttaagcgtctgaagaaaactgctcatgaagac-aaagtgctcctgaagt 20730595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 139154 - 139209
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    ||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  139154 gaagaacaataaagagcaaaggaatcaacaaaaagaaagcttaaagcgtctgaaga 139209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 147175 - 147230
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    ||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  147175 gaagaacaataaagagcaaaggaatcaacaaaaagaaagcttaaagcgtctgaaga 147230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 113 - 200
Target Start/End: Complemental strand, 22802487 - 22802399
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaagt 200  Q
    ||||||||| |||||| |||||||||||||||||||||||||||| ||||||||   ||  | |||||||||| ||||||||||||||||    
T  22802487 gaagaacaatagagaggaaaggaatcaacaaaaaggaagcttaaaacgtctgaaataaactgctcctgaagac-aaagtgctcctgaagt 22802399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 201
Target Start/End: Complemental strand, 15955050 - 15954960
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaa-ggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaagtg 201  Q
    ||||||||| | |||||||||||||||||||||| |||||||||||||||||||| | ||  | |||| ||||| |||||||||||||||||    
T  15955050 gaagaacaataaagagcaaaggaatcaacaaaaagggaagcttaaagcgtctgaaaaaaactgctccttaagac-aaagtgctcctgaagtg 15954960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 168
Target Start/End: Complemental strand, 16877608 - 16877521
Alignment:
Q  82 agacaaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaa-ggaagcttaaagcgtctgaaga 168  Q
    ||||||||||||||||| | |  |||| || ||||||||| | ||||||||||||| |||||||| ||| ||||||||||||||||||    
T  16877608 agacaaaatttgatatcttaaaaaggtcctggaagaacaataaagagcaaaggaattaacaaaaagggaggcttaaagcgtctgaaga 16877521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 20487688 - 20487743
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    ||||||||| | | |||||||||||||||||||| |||||||||||||||||||||    
T  20487688 gaagaacaataaaaagcaaaggaatcaacaaaaaagaagcttaaagcgtctgaaga 20487743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 173
Target Start/End: Complemental strand, 3680835 - 3680778
Alignment:
Q  116 gaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    |||||||||||||||||| |||| |||| ||||||||||||||| |||||||| ||||    
T  3680835 gaacaaaagagagcaaagaaatctacaagaaggaagcttaaagcatctgaagaaaagt 3680778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 209
Target Start/End: Original strand, 33351754 - 33351829
Alignment:
Q  136 atcaacaaaaagg-aagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaagtgatgatgtc 209  Q
    ||||||||||||| |||||||||||||||||||| ||  | |||||||||| ||||||||| |||||||||||||||    
T  33351754 atcaacaaaaagggaagcttaaagcgtctgaagaaaactgctcctgaagac-aaagtgctcttgaagtgatgatgtc 33351829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 17381793 - 17381737
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaa-ggaagcttaaagcgtctgaaga 168  Q
    ||||||||| | |||||| ||||||||||||||| ||||||||||||||||||||||    
T  17381793 gaagaacaataaagagcataggaatcaacaaaaagggaagcttaaagcgtctgaaga 17381737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 17608106 - 17608162
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaag-gaagcttaaagcgtctgaaga 168  Q
    |||||||||||||||||||| |||||||||||||| ||||| |||||| ||||||||    
T  17608106 gaagaacaaaagagagcaaatgaatcaacaaaaagagaagcctaaagcatctgaaga 17608162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 198
Target Start/End: Complemental strand, 29918365 - 29918277
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaa--aaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaa 198  Q
    |||||| || ||||||||||||||||||||||  ||||||||||||||||| |||||| ||  | | |||||||| ||||||||||||||    
T  29918365 gaagaataatagagagcaaaggaatcaacaaatcaaggaagcttaaagcgtatgaagaaaactgcttctgaagac-aaagtgctcctgaa 29918277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 168
Target Start/End: Original strand, 19832811 - 19832843
Alignment:
Q  136 atcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    |||||||||||||||||||||||||||||||||    
T  19832811 atcaacaaaaaggaagcttaaagcgtctgaaga 19832843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 25592886 - 25592839
Alignment:
Q  107 gttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagctt 154  Q
    ||||| |||||||||| |||||||| |||||| |||||||||||||||    
T  25592886 gttctggaagaacaaatgagagcaatggaatctacaaaaaggaagctt 25592839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 143
Target Start/End: Complemental strand, 21128594 - 21128564
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaa 143  Q
    |||||||||||||||||||||||||||||||    
T  21128594 gaagaacaaaagagagcaaaggaatcaacaa 21128564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 154
Target Start/End: Complemental strand, 23298303 - 23298261
Alignment:
Q  112 tgaagaacaaaagagagcaaaggaatcaacaaaaaggaagctt 154  Q
    ||||||||||| |||||||| |||||| |||||||||||||||    
T  23298303 tgaagaacaaatgagagcaatggaatctacaaaaaggaagctt 23298261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 171
Target Start/End: Original strand, 22058391 - 22058427
Alignment:
Q  136 atcaacaaaaagg-aagcttaaagcgtctgaagagaa 171  Q
    ||||||||||||| |||||||||||||||||||||||    
T  22058391 atcaacaaaaagggaagcttaaagcgtctgaagagaa 22058427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 79; Significance: 6e-37; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 32861 - 32740
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||  || ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||  | ||||||||    
T  32861 aaaatttggaattattattaggttctagaagaacaaaagagagtaaaggaatcaacaaaaaggaagcttaaggcgtctgaagaaaagtgcttctgaagac 32762  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
    ||||||||||||||||||||||    
T  32761 aaaagtgctcctgaagtgatga 32740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 49706 - 49586
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||| || ||||| |||| || |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||  || |||||||    
T  49706 aaaatttgaaattattataaggtgctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaggcgtc-gaagagaagtgctcttgaagac 49608  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
    ||||||||||||||||||||||    
T  49607 aaaagtgctcctgaagtgatga 49586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 6e-37; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 86 - 205
Target Start/End: Original strand, 33256044 - 33256165
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||| |||||||||||||| | |||||||| ||||||||||||||||||||||||| ||||||||| |||| |||||||||||  || |||||||    
T  33256044 aaaatttgaaatcattattaggttatagaagaacagaagagagcaaaggaatcaacaaaaatgaagcttaaggcgtttgaagagaagtgctcttgaagac 33256143  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
    ||||||||||||||||||||||    
T  33256144 aaaagtgctcctgaagtgatga 33256165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 86 - 205
Target Start/End: Original strand, 33276216 - 33276337
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||| |||||||||||||| | |||||||| ||||||||||||||||||||||||| ||||||||| |||| |||||||||||  || |||||||    
T  33276216 aaaatttgaaatcattattaggttatagaagaacagaagagagcaaaggaatcaacaaaaatgaagcttaaggcgtttgaagagaagtgctcttgaagac 33276315  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
    ||||||||||||||||||||||    
T  33276316 aaaagtgctcctgaagtgatga 33276337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 86 - 199
Target Start/End: Complemental strand, 1900721 - 1900607
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagac 183  Q
    ||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  | ||||||||||    
T  1900721 aaaatttgagatcatcattaggttctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaaacgtctgaagagaactgctcctgaagac 1900622  T
Q  184 aaaagtgctcctgaag 199  Q
     |||||||||||||||    
T  1900621 -aaagtgctcctgaag 1900607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 86 - 199
Target Start/End: Original strand, 20954146 - 20954261
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||  |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||  ||||||| ||    
T  20954146 aaaatttggaatcattattaggttttagaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaaaac 20954245  T
Q  184 aaaagtgctcctgaag 199  Q
    | ||||||||||||||    
T  20954246 agaagtgctcctgaag 20954261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 1578221 - 1578134
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  1578221 aaaatttgatatctttattaggttctgaaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcatctgaagagaagt 1578134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 36134543 - 36134437
Alignment:
Q  105 aggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaagtga 202  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||  | ||||||||||||||||||||||||||  |    
T  36134543 aggttctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagcgctcctgaagacaaaagtgctcctgaagcaa 36134444  T
Q  203 tgatgtc 209  Q
    |||||||    
T  36134443 tgatgtc 36134437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 105 - 205
Target Start/End: Original strand, 16235022 - 16235124
Alignment:
Q  105 aggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagacaaaagtgctcctgaagtga 202  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||| |||| |||||| ||||||  ||||||||||| |||||||||||||||||    
T  16235022 aggttctggaagaacaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaaaagaagtgctcctgaagacacaagtgctcctgaagtga 16235121  T
Q  203 tga 205  Q
    |||    
T  16235122 tga 16235124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 19717893 - 19717806
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||| ||||| |||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  19717893 aaaatttgaaatcatcattaggttctggaagaacaaaagagggcaaaggaatcaataaaaaggaagcttaaagcgtctgaagagaagt 19717806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 113 - 205
Target Start/End: Original strand, 22599900 - 22599994
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaagtgatga 205  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||  | ||||||||||||||||||||||||||||||||    
T  22599900 gaagaacaaaagagagcaaatgaatcaacaaaaaggaagcttgaagcatctgaagagaagcgctcctgaagacaaaagtgctcctgaagtgatga 22599994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 86 - 187
Target Start/End: Complemental strand, 38282971 - 38282868
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagac 183  Q
    ||||||||| ||||| |||||||||| ||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||  | ||||||||||    
T  38282971 aaaatttgagatcatcattaggttctagaagaacaaaatagagcaaatgaatcaataaaaaggaagcttaaagcgtctgaagagaactgctcctgaagac 38282872  T
Q  184 aaaa 187  Q
    ||||    
T  38282871 aaaa 38282868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 86 - 173
Target Start/End: Original strand, 28492127 - 28492214
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    |||||| || |||||||||||||||| |||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  28492127 aaaattcgaaatcattattaggttctggaagaataaaagagaacaaatgaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 28492214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 105 - 205
Target Start/End: Complemental strand, 2268897 - 2268795
Alignment:
Q  105 aggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaagtga 202  Q
    ||||||| |||||||||||||||||||| |||||| ||||||||||| ||  ||| |||||||||||  | |||||||||||||||||||||||||||||    
T  2268897 aggttctggaagaacaaaagagagcaaatgaatcatcaaaaaggaagtttgtagcatctgaagagaagcgctcctgaagacaaaagtgctcctgaagtga 2268798  T
Q  203 tga 205  Q
    |||    
T  2268797 tga 2268795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 86 - 200
Target Start/End: Complemental strand, 22154262 - 22154147
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||| ||| | | |||||||| |||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||  |||||||| |    
T  22154262 aaaatttgacatcttaaataggttctggaagaacaaaagagagcaaatgaatcaacaaaaatgaagcttgaagcgtctgaagagaagtgctcctgaagtc 22154163  T
Q  184 aaaagtgctcctgaagt 200  Q
     | ||||||||||||||    
T  22154162 -acagtgctcctgaagt 22154147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 10757792 - 10757706
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||||||| ||||||||||||  |||||||||||||||| ||||||||||| |||||||||||| |||||| |||||||||||    
T  10757792 aaaatttgatatctttattaggttctgaaagaacaaaagagagctaaggaatcaac-aaaaggaagcttgaagcgtttgaagagaagt 10757706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 48704588 - 48704501
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||| | |||||||||||| ||||||| |||| ||| |||||||||    
T  48704588 aaaatttgatatctttattaggttctggaagaacaaaagagagcaatgaaatcaacaaaaatgaagcttgaagcatctaaagagaagt 48704501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 82 - 205
Target Start/End: Complemental strand, 30893455 - 30893330
Alignment:
Q  82 agacaaaatttgatatcattattaggttcttgaagaacaaaa-gagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctg 178  Q
    |||||||| |||||||||||||||||||||  |||| ||||  |||||| |||||||||||||| ||||| ||| |||| |||||||||||||  |||||    
T  30893455 agacaaaaattgatatcattattaggttctgaaagagcaaattgagagctaaggaatcaacaaagaggaaacttgaagcatctgaagagaagtgctcctg 30893356  T
Q  179 aagacaaaagtgctcctgaagtgatga 205  Q
    ||| | ||||| |||||||||||||||    
T  30893355 aagtc-aaagtactcctgaagtgatga 30893330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 104 - 205
Target Start/End: Complemental strand, 7310171 - 7310071
Alignment:
Q  104 taggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagacaaaagtgctcctgaagtg 201  Q
    |||||||| ||||||||||||||||| || |||||||| |   ||||||||| ||| |||||||||||||  ||||||||||||||||||| ||||||||    
T  7310171 taggttctggaagaacaaaagagagctaaagaatcaacta---ggaagcttatagcatctgaagagaagtgctcctgaagacaaaagtgcttctgaagtg 7310075  T
Q  202 atga 205  Q
    ||||    
T  7310074 atga 7310071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 113 - 187
Target Start/End: Complemental strand, 29216144 - 29216068
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaa 187  Q
    ||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  29216144 gaagaacaatagagatcaaaagaatcaacaaaaaggaagcttaaagcgtctgaagaaaactgttcctgaagacaaaa 29216068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 168
Target Start/End: Original strand, 25448220 - 25448307
Alignment:
Q  82 agacaaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaa-ggaagcttaaagcgtctgaaga 168  Q
    ||||||||||||||||| | |  ||||  | ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  25448220 agacaaaatttgatatcttaaaaaggtcttggaagaacaatagagagcaaaggaatcaacaaaaagggaagcttaaagcgtctgaaga 25448307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 105 - 168
Target Start/End: Original strand, 32785663 - 32785726
Alignment:
Q  105 aggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    ||||||| ||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||    
T  32785663 aggttctggaagaacaatagaaagcaaatgaatcaacaaaaaggaagcttaaagcgtctgaaga 32785726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 114 - 209
Target Start/End: Original strand, 22427078 - 22427174
Alignment:
Q  114 aagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaagtgatgatgtc 209  Q
    |||||||| ||||||||||||||||||||||||| |||||||||| ||||||||| ||  | ||| ||||||  |||||||||||||||| |||||||    
T  22427078 aagaacaatagagagcaaaggaatcaacaaaaagaaagcttaaagtgtctgaagaaaactgctcccgaagac-caagtgctcctgaagtggtgatgtc 22427174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 12284828 - 12284707
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagaga-gcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaaga 182  Q
    ||||||||||||||||||||||||||  |||| ||||  | | |  |||||||||||||||||||||||| || | |||||||||||||  ||||||||     
T  12284828 aaaatttgatatcattattaggttctgaaagagcaaattaaaagttaaggaatcaacaaaaaggaagcttgaaacatctgaagagaagtgctcctgaagt 12284729  T
Q  183 caaaagtgctcctgaagtgatga 205  Q
    | |||||||| ||||||||||||    
T  12284728 c-aaagtgcttctgaagtgatga 12284707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 39200743 - 39200798
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||    
T  39200743 gaagaacaataaagagcaaaggaatcaacaaaaaggaagcttaaagcgtatgaaga 39200798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 82 - 199
Target Start/End: Complemental strand, 2835083 - 2834964
Alignment:
Q  82 agacaaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaa-ggaagcttaaagcgtctgaagagaa--gttcctg 178  Q
    ||||||||||||| ||| | |  ||||| | ||||||||| | |||||||||||||||||||||| ||||||||||||||| |||||| ||  | |||||    
T  2835083 agacaaaatttgacatcttaaaaaggttttggaagaacaataaagagcaaaggaatcaacaaaaagggaagcttaaagcgtttgaagaaaattgctcctg 2834984  T
Q  179 aagacaaaagtgctcctgaag 199  Q
    ||||| |||| ||||||||||    
T  2834983 aagac-aaagcgctcctgaag 2834964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 2327126 - 2327182
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaa-ggaagcttaaagcgtctgaaga 168  Q
    ||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||    
T  2327126 gaagaacaataaagagcaaaggaatcaacaaaaagggaagcttaaagcgtctgaaga 2327182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 105 - 205
Target Start/End: Original strand, 21191591 - 21191691
Alignment:
Q  105 aggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagacaaaagtgctcctgaagtga 202  Q
    ||||||| |||||||||| |||||||  ||||||||||| |||||||||| |||| |||||||| ||||  |||||||| |  |||| ||||||||||||    
T  21191591 aggttctggaagaacaaacgagagcattggaatcaacaagaaggaagcttgaagcatctgaagaaaagtgctcctgaagtc--aagtcctcctgaagtga 21191688  T
Q  203 tga 205  Q
    |||    
T  21191689 tga 21191691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 22464510 - 22464555
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaag 158  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||    
T  22464510 gaagaacaatatagagcaaaggaatcaacaaaaaggaagcttaaag 22464555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 23036273 - 23036341
Alignment:
Q  139 aacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagacaaaagtgctcctgaagtgatga 205  Q
    |||||||||||||||| |||| |||||| |||||   ||||||||||| ||||||||||||||||||||    
T  23036273 aacaaaaaggaagcttgaagcatctgaatagaagcgctcctgaagacacaagtgctcctgaagtgatga 23036341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 35402143 - 35402075
Alignment:
Q  139 aacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagacaaaagtgctcctgaagtgatga 205  Q
    |||||||||||||||| |||| | ||||||||||   ||||||||||| ||||||||||||||||||||    
T  35402143 aacaaaaaggaagcttgaagcatatgaagagaagcgctcctgaagacacaagtgctcctgaagtgatga 35402075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 17024692 - 17024756
Alignment:
Q  104 taggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    |||||||| |||||||||| |||| ||| ||||||||||| |||||||||| |||| ||||||||    
T  17024692 taggttctggaagaacaaatgagatcaatggaatcaacaagaaggaagcttgaagcatctgaaga 17024756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 18896298 - 18896362
Alignment:
Q  104 taggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    |||||||| |||||||||| |||||||| ||||||||||| |||||||| | |||| ||||||||    
T  18896298 taggttctggaagaacaaatgagagcaatggaatcaacaagaaggaagcatgaagcatctgaaga 18896362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 113 - 167
Target Start/End: Original strand, 19170063 - 19170119
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaag-gaag-cttaaagcgtctgaag 167  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||    
T  19170063 gaagaacaaaagagagcaaaggaatcaacaaaaagagaagccttaaagcatctgaag 19170119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 2267417 - 2267362
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    ||||||||| |||||| |||| ||||||||||||||||||||||||| | ||||||    
T  2267417 gaagaacaatagagagtaaagaaatcaacaaaaaggaagcttaaagcatatgaaga 2267362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 26547963 - 26548019
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaag-gaagcttaaagcgtctgaaga 168  Q
    ||||||||||||||||||||||||||||||| ||| ||| | |||||| ||||||||    
T  26547963 gaagaacaaaagagagcaaaggaatcaacaagaagagaaacctaaagcatctgaaga 26548019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 205
Target Start/End: Original strand, 20954254 - 20954285
Alignment:
Q  174 tcctgaagacaaaagtgctcctgaagtgatga 205  Q
    ||||||||||||||||||||||||||||||||    
T  20954254 tcctgaagacaaaagtgctcctgaagtgatga 20954285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 20109685 - 20109735
Alignment:
Q  104 taggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagctt 154  Q
    |||||||| |||||||||| |||| ||| |||||| |||||||||||||||    
T  20109685 taggttctggaagaacaaatgagaacaatggaatctacaaaaaggaagctt 20109735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 143
Target Start/End: Complemental strand, 22019710 - 22019680
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaa 143  Q
    |||||||||||||||||||||||||||||||    
T  22019710 gaagaacaaaagagagcaaaggaatcaacaa 22019680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 205
Target Start/End: Original strand, 22201564 - 22201594
Alignment:
Q  175 cctgaagacaaaagtgctcctgaagtgatga 205  Q
    |||||||||||||||||||||||||||||||    
T  22201564 cctgaagacaaaagtgctcctgaagtgatga 22201594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 143
Target Start/End: Complemental strand, 22655852 - 22655822
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaa 143  Q
    |||||||||||||||||||||||||||||||    
T  22655852 gaagaacaaaagagagcaaaggaatcaacaa 22655822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 143
Target Start/End: Complemental strand, 23065308 - 23065278
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaa 143  Q
    |||||||||||||||||||||||||||||||    
T  23065308 gaagaacaaaagagagcaaaggaatcaacaa 23065278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 154
Target Start/End: Original strand, 24227706 - 24227748
Alignment:
Q  112 tgaagaacaaaagagagcaaaggaatcaacaaaaaggaagctt 154  Q
    ||||||||||| |||||||| |||||| |||||||||||||||    
T  24227706 tgaagaacaaatgagagcaatggaatctacaaaaaggaagctt 24227748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 143
Target Start/End: Complemental strand, 28380368 - 28380338
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaa 143  Q
    |||||||||||||||||||||||||||||||    
T  28380368 gaagaacaaaagagagcaaaggaatcaacaa 28380338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 147
Target Start/End: Complemental strand, 35402180 - 35402146
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaag 147  Q
    ||||||||||||||||||| |||||||||||||||    
T  35402180 gaagaacaaaagagagcaatggaatcaacaaaaag 35402146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 21204672 - 21204743
Alignment:
Q  136 atcaacaaaaagg-aagcttaaagcgtctgaagagaagt--tcctgaagacaaaagtgctcctgaagtgatga 205  Q
    ||||||||||||| ||||||||||||||| |||| ||||  |||||||||| || ||||| ||||||||||||    
T  21204672 atcaacaaaaagggaagcttaaagcgtctaaagaaaagtgctcctgaagac-aacgtgcttctgaagtgatga 21204743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 205
Target Start/End: Complemental strand, 30572505 - 30572433
Alignment:
Q  136 atcaacaaaaagg-aagcttaaagcgtctgaagagaagt--tcctgaagacaaaagtgctcctgaagtgatga 205  Q
    ||||||||||||| ||| |||||||||||||||| || |  ||||||||   |||||||||||||||||||||    
T  30572505 atcaacaaaaagggaagtttaaagcgtctgaagaaaactgctcctgaagtttaaagtgctcctgaagtgatga 30572433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 35040480 - 35040422
Alignment:
Q  144 aaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaagtg 201  Q
    ||||||||||||||||||||||||| ||  | |||||||||| ||||||||| |||||||    
T  35040480 aaaggaagcttaaagcgtctgaagaaaactgctcctgaagac-aaagtgctcatgaagtg 35040422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 141
Target Start/End: Original strand, 52350426 - 52350454
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaac 141  Q
    |||||||||||||||||||||||||||||    
T  52350426 gaagaacaaaagagagcaaaggaatcaac 52350454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 15474 - 15355
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    |||| |||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||| |    
T  15474 aaaacttgatatctttattaggttctttaagaacaaaagagagctaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagtgctcctgaagtc 15375  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
      ||||||| ||||||||||||    
T  15374 --aagtgcttctgaagtgatga 15355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 86 - 209
Target Start/End: Original strand, 4669 - 4793
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||  |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||  |||||||| |    
T  4669 aaaatttggaatcattataaggttctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagtttgaagcatctgaagagaagtgctcctgaagtc 4768  T
Q  184 aaaagtgctcctgaagtgatgatgtc 209  Q
     |||||||||||||||||||||||||    
T  4769 -aaagtgctcctgaagtgatgatgtc 4793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 86 - 205
Target Start/End: Original strand, 18343 - 18463
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||  |||||||| |    
T  18343 aaaatttgatatctttattaggttttggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagtc 18442  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
     ||||||||| |||||||||||    
T  18443 -aaagtgctcatgaagtgatga 18463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 90 - 173
Target Start/End: Original strand, 4736 - 4819
Alignment:
Q  90 tttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4736 tttgaaatcattattaggttctagaagaacaaaagggagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 4819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 864 - 744
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||  |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  || ||||| |    
T  864 aaaatttggaatcattattaggttctggaaaaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcatctgaagagaagtgctcttgaagtc 765  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
    |||| ||||| |||||||||||    
T  764 aaaa-tgctcatgaagtgatga 744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 87 - 205
Target Start/End: Complemental strand, 2091 - 1972
Alignment:
Q  87 aaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagaca 184  Q
    |||||||| |||||||||| ||||| ||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||  |||||||| |     
T  2091 aaatttgaaatcattattatgttctggaagaacaaaagagagcgaaggaatcaacaaaaatgaagcttaaagtgtctgaagagaagtgctcctgaagtc- 1993  T
Q  185 aaagtgctcctgaagtgatga 205  Q
    ||||||||| |||||||||||    
T  1992 aaagtgctcatgaagtgatga 1972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 70; Significance: 1e-31; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 86 - 200
Target Start/End: Complemental strand, 39800 - 39685
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||  |||||||| |    
T  39800 aaaatttggaatcattattaggttctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagtc 39701  T
Q  184 aaaagtgctcctgaagt 200  Q
     ||||||||| ||||||    
T  39700 -aaagtgctcttgaagt 39685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 86 - 200
Target Start/End: Complemental strand, 137860 - 137745
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||  |||||||| |    
T  137860 aaaatttggaatcattattaggttctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagtc 137761  T
Q  184 aaaagtgctcctgaagt 200  Q
     ||||||||| ||||||    
T  137760 -aaagtgctcttgaagt 137745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 167
Target Start/End: Complemental strand, 159438 - 159375
Alignment:
Q  104 taggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaag 167  Q
    |||||||| |||||||||| |||||||| ||||||||||| || ||||||| |||| |||||||    
T  159438 taggttctggaagaacaaatgagagcaatggaatcaacaagaaagaagcttgaagcatctgaag 159375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 86 - 173
Target Start/End: Original strand, 25714 - 25801
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  25714 aaaatttggaatcattattaggttctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagattaaggcgtctgaagagaagt 25801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 87 - 173
Target Start/End: Complemental strand, 15049 - 14963
Alignment:
Q  87 aaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    |||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||    
T  15049 aaatttgaaatcattattaggttctggaagaacaaaagagagcgaaggaatcaacaaaaatgaagcttaaagtgtctgaagagaagt 14963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 104 - 205
Target Start/End: Complemental strand, 2001 - 1898
Alignment:
Q  104 taggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagacaaaagtgctcctgaagtg 201  Q
    ||||| || |||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||  |||||||||| ||| |||||||||||||    
T  2001 taggtcctggaagaacaaaagagagcaaaggaatcaataaaaaggaagcttaaagcatctgcagagaagtgctcctgaagactaaaatgctcctgaagtg 1902  T
Q  202 atga 205  Q
    ||||    
T  1901 atga 1898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 86 - 203
Target Start/End: Complemental strand, 30609 - 30490
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||  ||||||||||||  || ||||||||||||||||||||| ||||||||||||| || ||| |||| ||||||| |||||  ||||||||||    
T  30609 aaaatttggaatcattattaggacctggaagaacaaaagagagcaaagaaatcaacaaaaagaaaacttgaagcatctgaagcgaagtgctcctgaagac 30510  T
Q  184 aaaagtgctcctgaagtgat 203  Q
    ||||||||||||||||||||    
T  30509 aaaagtgctcctgaagtgat 30490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 86 - 203
Target Start/End: Original strand, 5924 - 6043
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||  ||||||||||||  || ||||||||||||||||||||| ||||||||||||| || ||| |||| ||||||| |||||  ||||||||||    
T  5924 aaaatttggaatcattattaggacctggaagaacaaaagagagcaaagaaatcaacaaaaagaaaacttgaagcatctgaagcgaagtgctcctgaagac 6023  T
Q  184 aaaagtgctcctgaagtgat 203  Q
    ||||||||||||||||||||    
T  6024 aaaagtgctcctgaagtgat 6043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 105 - 205
Target Start/End: Complemental strand, 212723 - 212622
Alignment:
Q  105 aggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagacaaaagtgctcctgaagtga 202  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||| || |||||||||||||||  |||||||| | |||||||||||||||| |    
T  212723 aggttctggaagaacaaaagagagctaaggaatcaacaaaaaggaagcttgaaacgtctgaagagaagtgctcctgaagtc-aaagtgctcctgaagtaa 212625  T
Q  203 tga 205  Q
    |||    
T  212624 tga 212622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 64; Significance: 5e-28; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 86 - 169
Target Start/End: Original strand, 377298 - 377381
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagag 169  Q
    ||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||    
T  377298 aaaatttgatatctttattaggttctggaagaacaaaagagagctaaggaatcaactaaaaggaagcttaaagtgtctgaagag 377381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 82 - 168
Target Start/End: Original strand, 30589 - 30675
Alignment:
Q  82 agacaaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    |||||||| |||  |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||    
T  30589 agacaaaaattggaatcattattaggttctggaagaacaaaagagagcaaaggaatcaacaaaatggaagcttaagacgtctgaaga 30675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 243994 - 244058
Alignment:
Q  104 taggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    |||||||| ||||||||||  ||||||| ||||||||||| |||||||||| |||| ||||||||    
T  243994 taggttctggaagaacaaattagagcaatggaatcaacaagaaggaagcttgaagcatctgaaga 244058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 205
Target Start/End: Complemental strand, 220608 - 220506
Alignment:
Q  104 taggttcttgaagaacaaaa-gagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagacaaaagtgctcctgaagt 200  Q
    ||||||||  |||||||||  |||||| | |||||||||||||||||| ||| ||||||||||||| ||||  |||||||| |  |||||||||||||||    
T  220608 taggttctgaaagaacaaattgagagctatggaatcaacaaaaaggaaccttgaagcgtctgaagaaaagtgctcctgaagtc--aagtgctcctgaagt 220511  T
Q  201 gatga 205  Q
     ||||    
T  220510 aatga 220506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 113 - 201
Target Start/End: Original strand, 89820 - 89909
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaagtg 201  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||| |||||||||||||||||    
T  89820 gaagaacaatagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagaaaattgttcctgaagac-aaagtgctcctgaagtg 89909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1434 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 130 - 205
Target Start/End: Original strand, 553 - 630
Alignment:
Q  130 aaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagacaaaagtgctcctgaagtgatga 205  Q
    ||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||    
T  553 aaaggaatcaacaaaaaggaagcttaaagtgtctgaagagaagtgctcctgaagacaaaagtgctcctgaagtgatga 630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 86 - 205
Target Start/End: Original strand, 20693 - 20813
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||| ||| | | |||||||| ||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||  ||||||||      
T  20693 aaaatttgacatcttaaataggttctggaagaacaaaagagagctaaggaatcaacaaaaaggaagtttgaagcgtctgaagagaagtgctcctgaag-t 20791  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
    || |||||||||||||||||||    
T  20792 aatagtgctcctgaagtgatga 20813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 86 - 203
Target Start/End: Original strand, 19196 - 19314
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaac-aaaaaggaagcttaaagcgtctgaagagaagt--tcctgaaga 182  Q
    ||||||||||||| |||||||||| | ||||||||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||||||  ||||||||     
T  19196 aaaatttgatatctttattaggttatggaagaacaaaagagagctaaggagtcaacaaaaaaggaagcttgaagcgtctgaagagaagtgctcctgaagt 19295  T
Q  183 caaaagtgctcctgaagtgat 203  Q
    |  ||||||||||||||||||    
T  19296 c--aagtgctcctgaagtgat 19314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 86 - 173
Target Start/End: Original strand, 5676 - 5763
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||| || |||| |||||||| ||||    
T  5676 aaaatttgatatctttattaggttctggaagaacaaaagagagctaaggaatcaacaaaaaggaagtttgaagcatctgaagaaaagt 5763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 104 - 205
Target Start/End: Original strand, 27185 - 27287
Alignment:
Q  104 taggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagacaaaagtgctcctgaagtg 201  Q
    ||||||||  || |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||  | |||||| | |||||||||||||||||    
T  27185 taggttctgaaataacaaaagagagcaaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgcttctgaaggc-aaagtgctcctgaagtg 27283  T
Q  202 atga 205  Q
    ||||    
T  27284 atga 27287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 113 - 201
Target Start/End: Original strand, 437 - 526
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaagtg 201  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||  | |||||||||| |||||||||||||||||    
T  437 gaagaacaataaagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagaaaactgctcctgaagac-aaagtgctcctgaagtg 526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 86 - 205
Target Start/End: Original strand, 5413 - 5534
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaa-gagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaaga 182  Q
    ||||||||| ||| | | |||||||| ||||||||||| ||||||||| |||||||| |||||||| ||| ||||||||||||||||||  ||||||||     
T  5413 aaaatttgacatcttaaataggttctggaagaacaaaatgagagcaaatgaatcaactaaaaggaaccttgaagcgtctgaagagaagtgctcctgaag- 5511  T
Q  183 caaaagtgctcctgaagtgatga 205  Q
     ||||||||||||||||||||||    
T  5512 taaaagtgctcctgaagtgatga 5534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 86 - 173
Target Start/End: Original strand, 60607 - 60694
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||||||| ||||||||||||  ||||| |||||  ||| |||||||||||||||||||||||| ||||||||||||||||||    
T  60607 aaaatttgatatctttattaggttctgaaagaaaaaaaggaagctaaggaatcaacaaaaaggaagcttgaagcgtctgaagagaagt 60694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 105 - 205
Target Start/End: Complemental strand, 103926 - 103824
Alignment:
Q  105 aggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaagtga 202  Q
    |||||||  ||||||||||||||||||| ||||||||||| ||||||||| |||| |||||||||||  | ||||||||||||||||||| || ||||||    
T  103926 aggttctgaaagaacaaaagagagcaaatgaatcaacaaataggaagcttgaagcatctgaagagaagcgctcctgaagacaaaagtgctactaaagtga 103827  T
Q  203 tga 205  Q
    |||    
T  103826 tga 103824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 10182 - 10062
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagac 183  Q
    ||||||||||||| | | ||||||||  ||||||||||||||| || |||||||||||||||||||||| |||| |||||||||||  | | |||||| |    
T  10182 aaaatttgatatcttcaataggttctgaaagaacaaaagagaggaatggaatcaacaaaaaggaagcttgaagcatctgaagagaaatgcttctgaagtc 10083  T
Q  184 aaaagtgctcctgaagtgatga 205  Q
     |||||||||||||||||||||    
T  10082 -aaagtgctcctgaagtgatga 10062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 105 - 199
Target Start/End: Complemental strand, 143460 - 143365
Alignment:
Q  105 aggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaag 199  Q
    ||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||  | || ||||||| |||||||||||||||    
T  143460 aggttctggaagaacaatagagagcaaaggaatcaagaaaaaggaagcttaaagcgtctgaagaaaactgctcttgaagac-aaagtgctcctgaag 143365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 105 - 186
Target Start/End: Complemental strand, 8059 - 7976
Alignment:
Q  105 aggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa--gttcctgaagacaaa 186  Q
    ||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||  | |||||||||||||    
T  8059 aggttctggaagaacaatagagagcaaaggaatcaacaaaaagaaagcttaaagcgtctgaagaaaattgctcctgaagacaaa 7976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 16170 - 16047
Alignment:
Q  86 aaaatttgatatcattattaggtt-cttgaagaacaaaa-gagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaag 181  Q
    ||||||||||||||||||| |||| ||| |||| | ||  |||||| |||||||||||||||||||||||| |||| |||||||||| ||  ||||||||    
T  16170 aaaatttgatatcattattcggtttcttaaagagcgaattgagagctaaggaatcaacaaaaaggaagcttgaagcatctgaagagatgtgctcctgaag 16071  T
Q  182 acaaaagtgctcctgaagtgatga 205  Q
     ||||||||||| |||||||||||    
T  16070 tcaaaagtgctcatgaagtgatga 16047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 86 - 173
Target Start/End: Original strand, 9099 - 9185
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||| ||| | | |||||||| |||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||    
T  9099 aaaatttgacatcttaaataggttctggaagaacaaaagagagcaaatgaatcaac-aaaaggaagcttgaagcgtctgaagagaagt 9185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 105 - 168
Target Start/End: Complemental strand, 19404 - 19341
Alignment:
Q  105 aggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  19404 aggttctggaagaacaatagagagcaaaggaatcaacaaaaaggaagcttaaagcatctgaaga 19341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 86 - 197
Target Start/End: Complemental strand, 12599 - 12486
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagac 183  Q
    ||||||||| ||| | | |||||||| |||||||||||||||| || |||||||||||||||||||||| |||| | |||| | ||||  |||||||||     
T  12599 aaaatttgacatcttaaataggttctggaagaacaaaagagagtaatggaatcaacaaaaaggaagcttgaagcatttgaataaaagttctcctgaagat 12500  T
Q  184 aaaagtgctcctga 197  Q
    ||||||||||||||    
T  12499 aaaagtgctcctga 12486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 23022 - 22964
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaa 171  Q
    ||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  23022 gaagaacaatagagagcaaaagaatcaacaaaaatgaagcttaaagcgtctgaagagaa 22964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 107 - 205
Target Start/End: Original strand, 9880 - 9978
Alignment:
Q  107 gttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagacaaaagtgctcctgaagtgatg 204  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||| |||  | |||||||||||  ||||||||   | ||||||||||||||||||    
T  9880 gttctggaagaacaaaagagagcaatggaatcaacaaaaaggaagcttgaagaatatgaagagaagtgctcctgaag--tatagtgctcctgaagtgatg 9977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 205
Target Start/End: Complemental strand, 6360 - 6259
Alignment:
Q  104 taggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt--tcctgaagacaaaagtgctcctgaagtg 201  Q
    |||||||| |||||||||| |||||||| ||||||||||| |||||||||| |||| |||||||| ||||  |||||||| |  ||||| ||||||||||    
T  6360 taggttctagaagaacaaatgagagcaatggaatcaacaagaaggaagcttgaagcatctgaagaaaagtgctcctgaagtc--aagtgttcctgaagtg 6263  T
Q  202 atga 205  Q
    ||||    
T  6262 atga 6259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 10325 - 10238
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||| ||| | | |||||||| ||||||||||||||| | || ||||||| ||||||||||||| |||| |||||||||||||    
T  10325 aaaatttgacatcttaaataggttctggaagaacaaaagagatctaaagaatcaataaaaaggaagcttgaagcatctgaagagaagt 10238  T

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Target: scaffold0452 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 82 - 168
Target Start/End: Original strand, 1585 - 1672
Alignment:
Q  82 agacaaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaa-ggaagcttaaagcgtctgaaga 168  Q
    ||||||||||||||||| | |  ||||  | ||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||    
T  1585 agacaaaatttgatatcttaaaaaggtcttagaagaacaataaagagcaaaggaatcaacaaaaagggaagcttaaagcgtctgaaga 1672  T

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Target: scaffold0395 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 86 - 173
Target Start/End: Original strand, 13256 - 13343
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||||||| ||||||||||||  || | ||||||| ||| || ||||||||||||| ||||||| |||| |||||||||||||    
T  13256 aaaatttgatatctttattaggttctgaaaaaccaaaagaaagctaaagaatcaacaaaaaagaagcttgaagcatctgaagagaagt 13343  T

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Target: scaffold0120 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 86 - 173
Target Start/End: Original strand, 36498 - 36585
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||| ||| | | |||||| | ||||||||||||||||||| ||||||||  |||||||||||| |||| |||||||||||||    
T  36498 aaaatttgacatcttaaataggttatggaagaacaaaagagagcaatggaatcaaataaaaggaagcttgaagcatctgaagagaagt 36585  T

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Target: scaffold0120; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 42507 - 42420
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||| ||| | | |||||| | ||||||||||||||||||| ||||||||  |||||||||||| |||| |||||||||||||    
T  42507 aaaatttgacatcttaaataggttatggaagaacaaaagagagcaatggaatcaaataaaaggaagcttgaagcatctgaagagaagt 42420  T

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Target: scaffold1331 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1331
Description:

Target: scaffold1331; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 168
Target Start/End: Original strand, 328 - 414
Alignment:
Q  82 agacaaaatttgatatcattattaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    ||||||||||||| ||| | |  ||||| | ||||||||| | |||||||| ||||||| |||||||||||||||||||||||||||    
T  328 agacaaaatttgacatcttaaaaaggttttggaagaacaacaaagagcaaatgaatcaataaaaaggaagcttaaagcgtctgaaga 414  T

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Target: scaffold0439 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 6457 - 6513
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaa-ggaagcttaaagcgtctgaaga 168  Q
    ||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||    
T  6457 gaagaacaataaagagcaaaggaatcaacaaaaagggaagcttaaagcgtctgaaga 6513  T

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Target: scaffold0012 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 215229 - 215285
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaa-ggaagcttaaagcgtctgaaga 168  Q
    ||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||    
T  215229 gaagaacaataaagagcaaaggaatcaacaaaaagggaagcttaaagcgtctgaaga 215285  T

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Target: scaffold0050 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 167
Target Start/End: Complemental strand, 35567 - 35512
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaag-gaagcttaaagcgtctgaag 167  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||    
T  35567 gaagaacaaaagagagcaaaggaatcaacaaaaagagaagcctaaagcatctgaag 35512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 147
Target Start/End: Complemental strand, 17356 - 17318
Alignment:
Q  109 tcttgaagaacaaaagagagcaaaggaatcaacaaaaag 147  Q
    |||||||||||||||||||||||||||||||||||||||    
T  17356 tcttgaagaacaaaagagagcaaaggaatcaacaaaaag 17318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 173
Target Start/End: Complemental strand, 41016 - 40946
Alignment:
Q  103 ttaggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||||||| |||||||||| |||||||| ||||||||||||||||||| || || | |||||||| ||||    
T  41016 ttaggttctggaagaacaaatgagagcaatggaatcaacaaaaaggaagtttgaaccatctgaagaaaagt 40946  T

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Target: scaffold0908 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 3619 - 3675
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaag-gaagcttaaagcgtctgaaga 168  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||| || |||||    
T  3619 gaagaacaaaagagagcaaaggaatcaacaaaaagagaagcctaaagcatccgaaga 3675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 12111 - 12055
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaag-gaagcttaaagcgtctgaaga 168  Q
    |||||||||||||||| |||||||||||||||||| ||||| |||||| ||||||||    
T  12111 gaagaacaaaagagaggaaaggaatcaacaaaaagagaagcctaaagcatctgaaga 12055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 7671 - 7615
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaag-gaagcttaaagcgtctgaaga 168  Q
    |||||| |||||||||||||||||||||||||||| ||||| |||||| ||||||||    
T  7671 gaagaaaaaaagagagcaaaggaatcaacaaaaagagaagcctaaagcatctgaaga 7615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 78113 - 78169
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaagg-aagcttaaagcgtctgaaga 168  Q
    ||||||||| | |||||||||||||||||||||||| ||| ||||||||||||||||    
T  78113 gaagaacaataaagagcaaaggaatcaacaaaaaggaaagattaaagcgtctgaaga 78169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 5334 - 5390
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaa-ggaagcttaaagcgtctgaaga 168  Q
    ||||||||| | |||||||||||||||||||||| ||||||||||||||| ||||||    
T  5334 gaagaacaataaagagcaaaggaatcaacaaaaagggaagcttaaagcgtttgaaga 5390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 23350 - 23419
Alignment:
Q  136 atcaacaaaaagg-aagcttaaagcgtctgaagagaa--gttcctgaagacaaaagtgctcctgaagtgat 203  Q
    ||||||||||||| |||||||||||||||||||| ||  | |||||||||| |||||||||||||||||||    
T  23350 atcaacaaaaagggaagcttaaagcgtctgaagaaaactgctcctgaagac-aaagtgctcctgaagtgat 23419  T

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Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000003; HSPs: 3)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 6248 - 6303
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    |||||||||||||||||||||||||||||||||  ||| | |||||| ||||||||    
T  6248 gaagaacaaaagagagcaaaggaatcaacaaaagagaaacctaaagcatctgaaga 6303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 52894 - 52855
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaaga 125  Q
    ||||||||| |||||||||||||||| |||||||||||||    
T  52894 aaaatttgaaatcattattaggttctggaagaacaaaaga 52855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 56846 - 56807
Alignment:
Q  86 aaaatttgatatcattattaggttcttgaagaacaaaaga 125  Q
    ||||||||| |||||||||||||||| |||||||||||||    
T  56846 aaaatttgaaatcattattaggttctggaagaacaaaaga 56807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1321 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1321
Description:

Target: scaffold1321; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 168
Target Start/End: Original strand, 664 - 716
Alignment:
Q  117 aacaaaagagagcaaaggaatcaacaaaaag-gaagcttaaagcgtctgaaga 168  Q
    ||||||||||||||||||||||||||||||| ||| | |||||| ||||||||    
T  664 aacaaaagagagcaaaggaatcaacaaaaagagaaacctaaagcatctgaaga 716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1263 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1263
Description:

Target: scaffold1263; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 168
Target Start/End: Original strand, 857 - 909
Alignment:
Q  117 aacaaaagagagcaaaggaatcaacaaaaag-gaagcttaaagcgtctgaaga 168  Q
    ||||||||||||||||||||||||||||||| ||| | |||||| ||||||||    
T  857 aacaaaagagagcaaaggaatcaacaaaaagagaaacctaaagcatctgaaga 909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0655 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 5492 - 5436
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaag-gaagcttaaagcgtctgaaga 168  Q
    ||||||||||||||||||||||||||||||| ||| ||| | |||||| ||||||||    
T  5492 gaagaacaaaagagagcaaaggaatcaacaagaagagaaacctaaagcatctgaaga 5436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 17534 - 17590
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaag-gaagcttaaagcgtctgaaga 168  Q
    ||||||||||||||||||||||||||||||| ||| ||| | |||||| ||||||||    
T  17534 gaagaacaaaagagagcaaaggaatcaacaagaagagaaacctaaagcatctgaaga 17590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 9679 - 9623
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaag-gaagcttaaagcgtctgaaga 168  Q
    ||||||||||||||||||||||||||||||| ||| ||| | |||||| ||||||||    
T  9679 gaagaacaaaagagagcaaaggaatcaacaagaagagaaacctaaagcatctgaaga 9623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 156362 - 156418
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaacaaaaag-gaagcttaaagcgtctgaaga 168  Q
    ||||||||||||||||||||||||||||||| ||| ||| | |||||| ||||||||    
T  156362 gaagaacaaaagagagcaaaggaatcaacaagaagagaaacctaaagcatctgaaga 156418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 141
Target Start/End: Original strand, 481521 - 481549
Alignment:
Q  113 gaagaacaaaagagagcaaaggaatcaac 141  Q
    |||||||||||||||||||||||||||||    
T  481521 gaagaacaaaagagagcaaaggaatcaac 481549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 173
Target Start/End: Complemental strand, 74934 - 74865
Alignment:
Q  104 taggttcttgaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    |||||||| |||||||||| |||||||  ||||||||||| ||| ||| || |||| |||||||| ||||    
T  74934 taggttctggaagaacaaacgagagcagtggaatcaacaagaagaaaggttgaagcatctgaagaaaagt 74865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0527
Description:

Target: scaffold0527; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 168
Target Start/End: Complemental strand, 209 - 177
Alignment:
Q  136 atcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    |||||||||| ||||||||||||||||||||||    
T  209 atcaacaaaagggaagcttaaagcgtctgaaga 177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 168
Target Start/End: Complemental strand, 8272 - 8240
Alignment:
Q  136 atcaacaaaaaggaagcttaaagcgtctgaaga 168  Q
    |||||||||| ||||||||||||||||||||||    
T  8272 atcaacaaaagggaagcttaaagcgtctgaaga 8240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 173
Target Start/End: Complemental strand, 10279 - 10239
Alignment:
Q  133 ggaatcaacaaaaaggaagcttaaagcgtctgaagagaagt 173  Q
    ||||| |||||||||||||||| ||||||||||||| ||||    
T  10279 ggaataaacaaaaaggaagcttgaagcgtctgaagaaaagt 10239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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