View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend Query Query hiting target
Query hiting target's complemental strand Query's complemental strand hiting target
Query's complemental strand hiting target's complemental strand
Alignment Overview
Query: NF0058_low_7 (Length: 208)
Name: NF0058_low_7
Description: NF0058
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[» ] NF0058_low_7
[» ] scaffold1415 (1 HSPs)
[» ] scaffold0070 (2 HSPs)
[» ] scaffold0830 (1 HSPs)
Alignment Details
Target: scaffold1415 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: scaffold1415
Description:
Target: scaffold1415; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 188 - 10
Alignment:
Q
1
gataataaactgaatggatcaatgcccaaatcatttggtcaaatggtaagcttgatctccttggacttgtcccaaaatatgttaactggtgttattccaa
100
Q
||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
T
188
gataataaactgaatggatcaattcccaaatcacttgctcaaatggtaagcttgatctccttggacttgtcccaaaatatgttaactggtgttattccaa
89
T
Q
101
aatccttagaatcacttttgtatcttcaaaacatcaacttctcatataatagattacaaggagagattcctgatggtgg
179
Q
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
T
88
aatccttagaatcacttttgtatcttcaaaacatcaacttctcatataatagattacaaggagagattcctaatggtgg
10
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 155; Significance: 2e-82; HSPs: 14)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 25696512 - 25696334
Alignment:
Q
1
gataataaactgaatggatcaatgcccaaatcatttggtcaaatggtaagcttgatctccttggacttgtcccaaaatatgttaactggtgttattccaa
100
Q
||||||||||||||||| ||| | ||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
T
25696512
gataataaactgaatggttcagttcccaaatcacttggtgaaatggtaagcttgatctctttggacttgtcccaaaatatgttaactggtgttattccaa
25696413
T
Q
101
aatccttagaatcacttttgtatcttcaaaacatcaacttctcatataatagattacaaggagagattcctgatggtgg
179
Q
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
T
25696412
aatccttagaatcacttttgtatcttcaaaacatcaacttctcatataatagattacaaggagagattcctgatggtgg
25696334
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 25454131 - 25453956
Alignment:
Q
4
aataaactgaatggatcaatgcccaaatcatttggtcaaatggtaagcttgatctccttggacttgtcccaaaatatgttaactggtgttattccaaaat
103
Q
|||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
T
25454131
aataaactgattggatcaattcccaaatcacttggtcaaatggtaagcttgatctctttggacttgtcccaaaatatgttaactggtgttattccaaaat
25454032
T
Q
104
ccttagaatcacttttgtatcttcaaaacatcaacttctcatataatagattacaaggagagattcctgatggtgg
179
Q
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||
T
25454031
ccttagaatcacttttgtatcttcaaaacatcaacttctcatataatagattacaaggagagaatcctaatggtgg
25453956
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 25323808 - 25323630
Alignment:
Q
1
gataataaactgaatggatcaatgcccaaatcatttggtcaaatggtaagcttgatctccttggacttgtcccaaaatatgttaactggtgttattccaa
100
Q
||||||||||||||||| ||||| ||||||||| ||||| |||||||||| || ||||| |||||||||||| ||||||||||||| |||||||||||||
T
25323808
gataataaactgaatggttcaattcccaaatcacttggtgaaatggtaagattaatctctttggacttgtccaaaaatatgttaacaggtgttattccaa
25323709
T
Q
101
aatccttagaatcacttttgtatcttcaaaacatcaacttctcatataatagattacaaggagagattcctgatggtgg
179
Q
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
T
25323708
aatccttagaatcacttttgtatcttcaaaacatcaacttctcatataatagattacaaggagagattcctgatggtgg
25323630
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 25605789 - 25605619
Alignment:
Q
1
gataataaactgaatggatcaatgcccaaatcatttggtcaaatggtaagcttgatctccttggacttgtcccaaaatatgttaactggtgttattccaa
100
Q
||||||||||||||||||||||| || ||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||
T
25605789
gataataaactgaatggatcaattcctgaatcacttggtcaaatgataagcttgatctctttggacttgtcccaaaatatgttaactggtgttattccaa
25605690
T
Q
101
aatccttagaatcacttttgtatcttcaaaacatcaacttctcatataatagattacaaggagagattcct
171
Q
||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||
T
25605689
aatccttagaatcacttgtgtatctccaaaacatcaacttctcatataatagattacaaggagagattcct
25605619
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 25476812 - 25476635
Alignment:
Q
2
ataataaactgaatggatcaatgcccaaatcatttggtcaaatggtaagcttgatctccttggacttgtcccaaaatatgttaactggtgttattccaaa
101
Q
|||| ||||||||||||||||| || |||| ||||| ||||||| ||||||| ||||||||||||||||||||||||| |||| ||| ||||||||||
T
25476812
ataacaaactgaatggatcaattccatcatcacttggtgaaatggtgagcttgacctccttggacttgtcccaaaatatgctaaccggtattattccaaa
25476713
T
Q
102
atccttagaatcacttttgtatcttcaaaacatcaacttctcatataatagattacaaggagagattcctgatggtgg
179
Q
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
T
25476712
atccttagaatcacttttgtatcttgaaaacatcaacttctcatataatagattacaaggagagattcctgatggtgg
25476635
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 25571034 - 25570857
Alignment:
Q
2
ataataaactgaatggatcaatgcccaaatcatttggtcaaatggtaagcttgatctccttggacttgtcccaaaatatgttaactggtgttattccaaa
101
Q
|||| ||| ||||||| ||||| |||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
T
25571034
ataacaaattgaatgggtcaattcccacatcacttggtgaaatggtaagcttgatctccttggacttgtcccaaaatatgctagctggtgttattccaaa
25570935
T
Q
102
atccttagaatcacttttgtatcttcaaaacatcaacttctcatataatagattacaaggagagattcctgatggtgg
179
Q
|| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
T
25570934
gtcattagaatcacttttgtaccttcagaacatcaacttctcatataatagattacaaggagagattcctgatggtgg
25570857
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 42 - 179
Target Start/End: Complemental strand, 25342091 - 25341954
Alignment:
Q
42
aatggtaagcttgatctccttggacttgtcccaaaatatgttaactggtgttattccaaaatccttagaatcacttttgtatcttcaaaacatcaacttc
141
Q
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
T
25342091
aatggtaagcttgatctctttggacttgtctcaaaatatgttaactggtgttattccaaaatccttagaatcacttttgtaccttcaaaacatcaacttc
25341992
T
Q
142
tcatataatagattacaaggagagattcctgatggtgg
179
Q
|||||||||||||||||||||||||||||| |||||||
T
25341991
tcatataatagattacaaggagagattcctaatggtgg
25341954
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 25716344 - 25716167
Alignment:
Q
2
ataataaactgaatggatcaatgcccaaatcatttggtcaaatggtaagcttgatctccttggacttgtcccaaaatatgttaactggtgttattccaaa
101
Q
|||| ||| ||||||||||||| ||| |||| || || |||||||||||||| |||| ||||||||||||||||||||| || |||||||||||||||
T
25716344
ataacaaattgaatggatcaattccctcatcacttagtgaaatggtaagcttggtctctttggacttgtcccaaaatatgctagatggtgttattccaaa
25716245
T
Q
102
atccttagaatcacttttgtatcttcaaaacatcaacttctcatataatagattacaaggagagattcctgatggtgg
179
Q
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
T
25716244
atccttagaatcacttttgtaccttcaaaacatcaacttctcatataatagattacaaggagagattcctgatggtgg
25716167
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 24874373 - 24874550
Alignment:
Q
2
ataataaactgaatggatcaatgcccaaatcatttggtcaaatggtaagcttgatctccttggacttgtcccaaaatatgttaactggtgttattccaaa
101
Q
|||||||| ||||||| |||| |||| |||| ||||| ||||| ||||||| ||||||||||||||||||||||||||| |||| |||| | |||| ||
T
24874373
ataataaattgaatgggccaattcccacatcacttggtaaaatgataagcttaatctccttggacttgtcccaaaatatgctaacaggtgctgttcccaa
24874472
T
Q
102
atccttagaatcacttttgtatcttcaaaacatcaacttctcatataatagattacaaggagagattcctgatggtgg
179
Q
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
T
24874473
atccttagaatcacttgtgtatcttcaaaacatcaacttctcatataatagattacaaggagagattcctgatggtgg
24874550
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 42 - 179
Target Start/End: Complemental strand, 25312110 - 25311973
Alignment:
Q
42
aatggtaagcttgatctccttggacttgtcccaaaatatgttaactggtgttattccaaaatccttagaatcacttttgtatcttcaaaacatcaacttc
141
Q
|||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
T
25312110
aatgttaagcttgatctctttggacttgtctcaaaatatgttaactggtgttattccaaaatccttagaatcacttttgtaccttcaaaacatcaacttc
25312011
T
Q
142
tcatataatagattacaaggagagattcctgatggtgg
179
Q
|||||||||||||||||||||||||||||| |||||||
T
25312010
tcatataatagattacaaggagagattcctaatggtgg
25311973
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 25392444 - 25392331
Alignment:
Q
1
gataataaactgaatggatcaatgcccaaatcatttggtcaaatggtaagcttgatctccttggacttgtcccaaaatatgttaactggtgttattccaa
100
Q
||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
T
25392444
gataataaactgaatggatcaattcccaaatcaattggtcaaatggtaagcttgatctctttggacttgtcccaaaatatgttaactggtgttattccaa
25392345
T
Q
101
aatccttagaatca
114
Q
||||||||||||||
T
25392344
aatccttagaatca
25392331
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 25 - 179
Target Start/End: Original strand, 22899742 - 22899896
Alignment:
Q
25
cccaaatcatttggtcaaatggtaagcttgatctccttggacttgtcccaaaatatgttaactggtgttattccaaaatccttagaatcacttttgtatc
124
Q
|||| |||| ||||| ||||| | | |||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||
T
22899742
cccacatcacttggtgaaatgattaacttgttctctttggacttgtcccaaaatatgataactggtgttattccaaaatccttagcatcgcttttgtatc
22899841
T
Q
125
ttcaaaacatcaacttctcatataatagattacaaggagagattcctgatggtgg
179
Q
||| ||||||||| || |||||||||||| |||||||||||||||||||||||||
T
22899842
ttcgaaacatcaatttatcatataatagactacaaggagagattcctgatggtgg
22899896
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 13 - 176
Target Start/End: Complemental strand, 23259329 - 23259166
Alignment:
Q
13
aatggatcaatgcccaaatcatttggtcaaatggtaagcttgatctccttggacttgtcccaaaatatgttaactggtgttattccaaaatccttagaat
112
Q
||||||||||| |||| |||| ||||| | ||| |||||||||| ||||| ||| ||||| |||||||| ||| ||| ||||||||||||| |||||||
T
23259329
aatggatcaattcccacatcacttggtaacatgataagcttgatatccttagacatgtccgaaaatatgctaatcggtattattccaaaatcattagaat
23259230
T
Q
113
cacttttgtatcttcaaaacatcaacttctcatataatagattacaaggagagattcctgatgg
176
Q
|||||||||| ||||||||||| ||||| || ||||||||||||||||||||||||||||||||
T
23259229
cacttttgtaccttcaaaacattaacttatcgtataatagattacaaggagagattcctgatgg
23259166
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 25801303 - 25801252
Alignment:
Q
128
aaaacatcaacttctcatataatagattacaaggagagattcctgatggtgg
179
Q
||||||||||||||||||||||||||||||||||||||||||||||||||||
T
25801303
aaaacatcaacttctcatataatagattacaaggagagattcctgatggtgg
25801252
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070 (Bit Score: 147; Significance: 1e-77; HSPs: 2)
Name: scaffold0070
Description:
Target: scaffold0070; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 49473 - 49651
Alignment:
Q
1
gataataaactgaatggatcaatgcccaaatcatttggtcaaatggtaagcttgatctccttggacttgtcccaaaatatgttaactggtgttattccaa
100
Q
|||||||||||| |||||||||| |||| |||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
T
49473
gataataaactgtatggatcaattcccacatcacttggtgaaatggtaagcttggtctccttggacttgtcccaaaatatgttaactggtgttattccaa
49572
T
Q
101
aatccttagaatcacttttgtatcttcaaaacatcaacttctcatataatagattacaaggagagattcctgatggtgg
179
Q
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||
T
49573
aatccttagaatcacttttgtatcttcaaaacattaacttctcatataatagattaaaaggagagattcctgatggtgg
49651
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 15953 - 16130
Alignment:
Q
2
ataataaactgaatggatcaatgcccaaatcatttggtcaaatggtaagcttgatctccttggacttgtcccaaaatatgttaactggtgttattccaaa
101
Q
|||| |||||||||| |||||| || |||| ||||| ||||| | ||||||| ||||||||||||||| || ||||||||||||||||||||||||||
T
15953
ataacaaactgaatgaatcaattccatcatcacttggtgaaatgttgagcttgacctccttggacttgtctcagaatatgttaactggtgttattccaaa
16052
T
Q
102
atccttagaatcacttttgtatcttcaaaacatcaacttctcatataatagattacaaggagagattcctgatggtgg
179
Q
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
T
16053
atccttagaatcacttttgtatcttcaaaacatcaacttctcatataatagattacaaggagagattcctgatggtgg
16130
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 8 - 179
Target Start/End: Complemental strand, 10324989 - 10324818
Alignment:
Q
8
aactgaatggatcaatgcccaaatcatttggtcaaatggtaagcttgatctccttggacttgtcccaaaatatgttaactggtgttattccaaaatcctt
107
Q
|||||||||||||||| ||||||| | |||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
T
10324989
aactgaatggatcaattcccaaattacttggtcaaatggcaggcttgatctccttggacttgtcccaaaatatgttaactagtgttattccaaaatcctt
10324890
T
Q
108
agaatcacttttgtatcttcaaaacatcaacttctcatataatagattacaaggagagattcctgatggtgg
179
Q
||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||
T
10324889
agaatcacttttgtatcttgaaaacatcaacttatcatataatagattagaaggagagattcctgatggtgg
10324818
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0830 (Bit Score: 127; Significance: 9e-66; HSPs: 1)
Name: scaffold0830
Description:
Target: scaffold0830; HSP #1
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 3441 - 3619
Alignment:
Q
1
gataataaactgaatggatcaatgcccaaatcatttggtcaaatggtaagcttgatctccttggacttgtcccaaaatatgttaactggtgttattccaa
100
Q
||||| |||||| |||||||||| |||| |||| ||| | ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
T
3441
gataacaaactgtatggatcaattcccacatcacttgatgaaatggtaagcttgatctccttggacttgtctcaaaatatgctaactggtgttattccaa
3540
T
Q
101
aatccttagaatcacttttgtatcttcaaaacatcaacttctcatataatagattacaaggagagattcctgatggtgg
179
Q
|||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||
T
3541
aatccttagaatcacttttgtaccttcaaaacatcaacttctcatacaatagattgcaaggagagattccttatggtgg
3619
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 56; Significance: 2e-23; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 29 - 176
Target Start/End: Complemental strand, 5080877 - 5080730
Alignment:
Q
29
aatcatttggtcaaatggtaagcttgatctccttggacttgtcccaaaatatgttaactggtgttattccaaaatccttagaatcacttttgtatcttca
128
Q
||||| ||||| |||||||| |||||| | |||||||||||| |||||| | | |||||||| || |||||||||||||| ||||||| |||||| |
T
5080877
aatcacttggtgaaatggtaggcttgagtttcttggacttgtctcaaaatcttcttactggtgtgatcccaaaatccttagagtcactttcttatcttaa
5080778
T
Q
129
aaacatcaacttctcatataatagattacaaggagagattcctgatgg
176
Q
| |||| ||||| ||||| |||||||| ||||||||||||||| ||||
T
5080777
atacattaacttttcatacaatagattgcaaggagagattcctaatgg
5080730
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 30 - 176
Target Start/End: Original strand, 5101110 - 5101256
Alignment:
Q
30
atcatttggtcaaatggtaagcttgatctccttggacttgtcccaaaatatgttaactggtgttattccaaaatccttagaatcacttttgtatcttcaa
129
Q
|||| ||||| ||||| ||||||||| | |||||||||||| |||||| | | ||||||| || |||||||||||||| ||||||| |||||| ||
T
5101110
atcacttggtgaaatgttaagcttgagtttcttggacttgtctcaaaatcttcttactggtgcgatcccaaaatccttagagtcactttcttatcttaaa
5101209
T
Q
130
aacatcaacttctcatataatagattacaaggagagattcctgatgg
176
Q
|||| ||||| ||||| |||||||| ||||||||||||||| ||||
T
5101210
tacattaacttttcatacaatagattgcaaggagagattcctaatgg
5101256
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 30 - 176
Target Start/End: Original strand, 5118669 - 5118815
Alignment:
Q
30
atcatttggtcaaatggtaagcttgatctccttggacttgtcccaaaatatgttaactggtgttattccaaaatccttagaatcacttttgtatcttcaa
129
Q
|||| ||||| ||||| ||||||||| | |||||||||||| |||||| | | |||||||| || |||||||||||||| ||||||| |||||| ||
T
5118669
atcacttggtgaaatgctaagcttgagtttcttggacttgtctcaaaatcttcttactggtgtgatcccaaaatccttagagtcactttcttatcttaaa
5118768
T
Q
130
aacatcaacttctcatataatagattacaaggagagattcctgatgg
176
Q
|| | ||||| ||||| |||||||| ||||||||||||||| ||||
T
5118769
tacgttaacttttcatacaatagattgcaaggagagattcctaatgg
5118815
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 176
Target Start/End: Complemental strand, 14413200 - 14413035
Alignment:
Q
11
tgaatggatcaatgcccaaatcatttggtcaaatggtaagcttgatctccttggacttgtcccaaaatatgttaactggtgttattccaaaatccttaga
110
Q
|||||||||| || || |||||| ||||| ||||| ||||||| | | |||||||||||| |||||| | ||||| ||||| || ||||||||||||||
T
14413200
tgaatggatctattccaaaatcacttggtgaaatgttaagcttaagtttcttggacttgtctcaaaatcttttaaccggtgtgatcccaaaatccttaga
14413101
T
Q
111
atcacttttgtatcttcaaaacatcaacttctcatataatagattacaaggagagattcctgatgg
176
Q
||||| ||||| || |||| || || ||||| |||| ||| ||||||||||||||||||||
T
14413100
gctactttctgatcttaaatacataaatttgtcatacaatatattgcaaggagagattcctgatgg
14413035
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 60 - 176
Target Start/End: Original strand, 16885412 - 16885528
Alignment:
Q
60
cttggacttgtcccaaaatatgttaactggtgttattccaaaatccttagaatcacttttgtatcttcaaaacatcaacttctcatataatagattacaa
159
Q
|||||||||||| |||||| | |||||||||| |||||| ||||||||| ||||||| |||||| | |||| || || ||||| |||||||| |||
T
16885412
cttggacttgtctcaaaattttataactggtgtgattccagaatccttagtgtcactttcttatcttaagtacatgaatttgtcatacaatagattgcaa
16885511
T
Q
160
ggagagattcctgatgg
176
Q
|||||||||||||||||
T
16885512
ggagagattcctgatgg
16885528
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University
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