View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0059_low_2 (Length: 536)

Name: NF0059_low_2
Description: NF0059
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0059_low_2
NF0059_low_2
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-450)||(12437-12866)
[»] scaffold0634 (2 HSPs)
scaffold0634 (1-395)||(2753-3147)
scaffold0634 (379-415)||(3181-3217)
[»] chr2 (17 HSPs)
chr2 (1-447)||(26582862-26583313)
chr2 (1-332)||(23168954-23169288)
chr2 (1-332)||(23580211-23580545)
chr2 (292-450)||(5706610-5706768)
chr2 (298-453)||(23878326-23878481)
chr2 (277-400)||(29281353-29281475)
chr2 (269-431)||(25181446-25181606)
chr2 (293-431)||(9949-10086)
chr2 (220-453)||(23062983-23063216)
chr2 (203-415)||(26884489-26884701)
chr2 (220-395)||(23089604-23089779)
chr2 (220-395)||(23102032-23102207)
chr2 (289-395)||(21907746-21907852)
chr2 (220-363)||(24660876-24661019)
chr2 (269-363)||(27208324-27208417)
chr2 (269-363)||(27210659-27210752)
chr2 (391-453)||(23264551-23264613)
[»] chr6 (29 HSPs)
chr6 (1-447)||(29614738-29615189)
chr6 (255-450)||(12167637-12167832)
chr6 (255-450)||(19286546-19286741)
chr6 (255-448)||(19877730-19877923)
chr6 (255-450)||(19883506-19883701)
chr6 (255-450)||(19786455-19786650)
chr6 (292-450)||(34640575-34640733)
chr6 (292-450)||(34647249-34647407)
chr6 (290-450)||(25470290-25470451)
chr6 (315-448)||(21365067-21365200)
chr6 (315-448)||(23969049-23969182)
chr6 (289-395)||(18799818-18799924)
chr6 (80-395)||(25396343-25396658)
chr6 (293-431)||(20008493-20008630)
chr6 (220-395)||(21565761-21565936)
chr6 (203-354)||(19300359-19300509)
chr6 (228-420)||(19471891-19472082)
chr6 (1-112)||(19786751-19786861)
chr6 (1-112)||(12167425-12167535)
chr6 (1-112)||(19877518-19877628)
chr6 (1-112)||(19883294-19883404)
chr6 (1-112)||(19286334-19286444)
chr6 (277-415)||(29097221-29097359)
chr6 (277-354)||(9099694-9099770)
chr6 (269-354)||(11289294-11289378)
chr6 (391-450)||(24513370-24513429)
chr6 (340-395)||(24513414-24513469)
chr6 (378-415)||(31251879-31251916)
chr6 (270-333)||(9186841-9186903)
[»] chr3 (19 HSPs)
chr3 (1-447)||(41455687-41456137)
chr3 (1-453)||(18914195-18914646)
chr3 (303-447)||(24192274-24192418)
chr3 (277-414)||(14865201-14865338)
chr3 (289-395)||(16802037-16802143)
chr3 (292-393)||(55499698-55499799)
chr3 (202-389)||(13324376-13324562)
chr3 (64-121)||(18136117-18136174)
chr3 (337-453)||(17241085-17241201)
chr3 (271-449)||(10415123-10415301)
chr3 (271-449)||(10421793-10421971)
chr3 (338-431)||(17131147-17131240)
chr3 (202-333)||(13302844-13302974)
chr3 (202-333)||(13313520-13313650)
chr3 (380-449)||(10390034-10390104)
chr3 (338-395)||(12034015-12034072)
chr3 (277-415)||(19235629-19235767)
chr3 (64-117)||(18129607-18129660)
chr3 (269-333)||(12034057-12034119)
[»] chr7 (30 HSPs)
chr7 (1-447)||(13123506-13123961)
chr7 (192-447)||(13742921-13743174)
chr7 (1-447)||(12710435-12710890)
chr7 (255-450)||(13006706-13006901)
chr7 (292-450)||(12591230-12591389)
chr7 (315-448)||(3857953-3858087)
chr7 (293-431)||(2464736-2464874)
chr7 (277-431)||(16090442-16090595)
chr7 (220-453)||(16676623-16676845)
chr7 (220-453)||(17650859-17651081)
chr7 (277-431)||(29181654-29181807)
chr7 (319-431)||(20311597-20311709)
chr7 (228-453)||(13678770-13678995)
chr7 (1-112)||(13742692-13742803)
chr7 (289-395)||(11389918-11390024)
chr7 (292-415)||(14320192-14320316)
chr7 (220-425)||(46625259-46625464)
chr7 (270-385)||(11383440-11383554)
chr7 (338-431)||(2966383-2966476)
chr7 (338-431)||(20906993-20907086)
chr7 (1-112)||(13006494-13006604)
chr7 (64-108)||(13318007-13318051)
chr7 (380-427)||(13678982-13679030)
chr7 (69-123)||(16475929-16475983)
chr7 (391-441)||(21231532-21231582)
chr7 (270-395)||(21231567-21231690)
chr7 (380-416)||(13664450-13664487)
chr7 (321-354)||(46625551-46625584)
chr7 (269-333)||(20907071-20907133)
chr7 (270-354)||(31154742-31154825)
[»] chr4 (14 HSPs)
chr4 (126-450)||(8046420-8046744)
chr4 (292-450)||(53483013-53483171)
chr4 (277-431)||(16147376-16147529)
chr4 (269-431)||(11847453-11847614)
chr4 (272-425)||(15244566-15244719)
chr4 (270-453)||(15407438-15407608)
chr4 (303-395)||(14486052-14486144)
chr4 (64-121)||(14555881-14555938)
chr4 (272-425)||(13887138-13887289)
chr4 (272-425)||(13887995-13888146)
chr4 (272-421)||(15307471-15307620)
chr4 (1-112)||(8046777-8046887)
chr4 (202-265)||(14485975-14486037)
chr4 (269-352)||(27905613-27905695)
[»] scaffold1773 (2 HSPs)
scaffold1773 (126-447)||(324-644)
scaffold1773 (1-112)||(159-269)
[»] chr8 (10 HSPs)
chr8 (1-447)||(23865621-23866078)
chr8 (340-450)||(17053949-17054060)
chr8 (269-431)||(24321216-24321376)
chr8 (1-112)||(19902808-19902918)
chr8 (270-453)||(25111338-25111508)
chr8 (319-453)||(14057148-14057271)
chr8 (66-121)||(19987990-19988045)
chr8 (228-395)||(18613529-18613695)
chr8 (1-53)||(21282247-21282300)
chr8 (220-264)||(21931018-21931062)
[»] scaffold0117 (1 HSPs)
scaffold0117 (1-447)||(9167-9622)
[»] scaffold0029 (3 HSPs)
scaffold0029 (1-447)||(110945-111378)
scaffold0029 (302-431)||(91747-91876)
scaffold0029 (302-431)||(97473-97602)
[»] chr5 (19 HSPs)
chr5 (1-450)||(23527637-23528099)
chr5 (315-448)||(28889925-28890058)
chr5 (315-448)||(28896629-28896762)
chr5 (315-448)||(28909877-28910010)
chr5 (315-448)||(28931569-28931702)
chr5 (315-448)||(28946272-28946405)
chr5 (269-431)||(19236250-19236410)
chr5 (269-431)||(22460506-22460666)
chr5 (269-431)||(22467130-22467290)
chr5 (269-415)||(34829432-34829578)
chr5 (270-427)||(18408491-18408647)
chr5 (315-448)||(28933070-28933205)
chr5 (64-121)||(22232436-22232493)
chr5 (277-415)||(20781102-20781240)
chr5 (380-450)||(20819618-20819689)
chr5 (380-450)||(20826718-20826789)
chr5 (277-415)||(20772327-20772465)
chr5 (277-415)||(24930489-24930627)
chr5 (343-392)||(22439321-22439370)
[»] scaffold0456 (2 HSPs)
scaffold0456 (166-450)||(241-504)
scaffold0456 (166-450)||(7386-7649)
[»] scaffold0025 (1 HSPs)
scaffold0025 (303-447)||(14977-15121)
[»] chr1 (11 HSPs)
chr1 (255-448)||(41111214-41111407)
chr1 (269-431)||(21705625-21705785)
chr1 (269-431)||(21710167-21710328)
chr1 (269-431)||(20851678-20851838)
chr1 (293-431)||(20858305-20858442)
chr1 (203-416)||(19961472-19961684)
chr1 (270-395)||(18712098-18712223)
chr1 (64-121)||(20941657-20941714)
chr1 (1-112)||(41111002-41111112)
chr1 (220-425)||(22030298-22030504)
chr1 (321-353)||(20045382-20045414)
[»] scaffold0154 (1 HSPs)
scaffold0154 (215-395)||(30194-30374)
[»] scaffold0085 (1 HSPs)
scaffold0085 (269-431)||(4217-4377)
[»] scaffold0924 (1 HSPs)
scaffold0924 (344-447)||(1343-1446)
[»] scaffold0247 (1 HSPs)
scaffold0247 (289-450)||(10679-10829)
[»] scaffold0053 (2 HSPs)
scaffold0053 (277-431)||(80036-80189)
scaffold0053 (126-426)||(81764-82063)
[»] scaffold0222 (1 HSPs)
scaffold0222 (270-453)||(16121-16303)
[»] scaffold0249 (1 HSPs)
scaffold0249 (64-214)||(7517-7667)
[»] scaffold0138 (1 HSPs)
scaffold0138 (220-425)||(1117-1322)
[»] scaffold0001 (3 HSPs)
scaffold0001 (203-415)||(493588-493800)
scaffold0001 (1-112)||(174440-174551)
scaffold0001 (220-363)||(525062-525204)
[»] scaffold0023 (1 HSPs)
scaffold0023 (338-431)||(134867-134960)
[»] scaffold0317 (2 HSPs)
scaffold0317 (228-453)||(663-888)
scaffold0317 (380-427)||(875-923)
[»] scaffold0476 (1 HSPs)
scaffold0476 (292-414)||(3854-3976)
[»] scaffold0232 (1 HSPs)
scaffold0232 (220-425)||(18961-19166)
[»] scaffold0090 (1 HSPs)
scaffold0090 (251-415)||(17497-17661)
[»] scaffold0028 (2 HSPs)
scaffold0028 (126-393)||(65311-65577)
scaffold0028 (320-425)||(1467-1572)
[»] scaffold0453 (1 HSPs)
scaffold0453 (269-415)||(11112-11258)
[»] scaffold0461 (2 HSPs)
scaffold0461 (270-453)||(581-752)
scaffold0461 (270-354)||(7605-7688)
[»] scaffold0310 (1 HSPs)
scaffold0310 (271-395)||(6861-6983)
[»] scaffold0004 (3 HSPs)
scaffold0004 (220-395)||(129217-129393)
scaffold0004 (126-363)||(116073-116308)
scaffold0004 (391-453)||(116325-116388)
[»] scaffold0483 (1 HSPs)
scaffold0483 (203-416)||(11569-11782)
[»] scaffold0031 (2 HSPs)
scaffold0031 (220-425)||(121200-121406)
scaffold0031 (220-425)||(132077-132283)
[»] scaffold0261 (2 HSPs)
scaffold0261 (203-415)||(24131-24342)
scaffold0261 (379-415)||(24070-24106)
[»] scaffold0077 (3 HSPs)
scaffold0077 (305-395)||(4191-4281)
scaffold0077 (64-116)||(17972-18024)
scaffold0077 (64-116)||(23605-23657)
[»] scaffold0348 (1 HSPs)
scaffold0348 (64-121)||(1527-1584)
[»] scaffold0124 (2 HSPs)
scaffold0124 (289-395)||(34908-35014)
scaffold0124 (397-453)||(34861-34917)
[»] scaffold0139 (1 HSPs)
scaffold0139 (228-454)||(15521-15735)
[»] scaffold0094 (1 HSPs)
scaffold0094 (228-425)||(51552-51749)
[»] scaffold0034 (1 HSPs)
scaffold0034 (269-387)||(72631-72748)
[»] scaffold0720 (1 HSPs)
scaffold0720 (269-354)||(3882-3966)
[»] scaffold0206 (1 HSPs)
scaffold0206 (277-354)||(18045-18121)
[»] scaffold0235 (3 HSPs)
scaffold0235 (289-395)||(23226-23332)
scaffold0235 (391-440)||(15475-15524)
scaffold0235 (270-395)||(15509-15633)
[»] scaffold0107 (1 HSPs)
scaffold0107 (270-395)||(41160-41283)
[»] scaffold0020 (1 HSPs)
scaffold0020 (270-395)||(102499-102623)
[»] scaffold0006 (1 HSPs)
scaffold0006 (397-447)||(49595-49645)
[»] scaffold2054 (1 HSPs)
scaffold2054 (216-354)||(14-152)
[»] scaffold1061 (1 HSPs)
scaffold1061 (232-335)||(1712-1815)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-53)||(152548-152601)
[»] scaffold0535 (1 HSPs)
scaffold0535 (1-48)||(5972-6020)
[»] scaffold0169 (1 HSPs)
scaffold0169 (220-264)||(6299-6343)


Alignment Details
Target: scaffold0026 (Bit Score: 357; Significance: 0; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 357; E-Value: 0
Query Start/End: Original strand, 1 - 450
Target Start/End: Complemental strand, 12866 - 12437
Alignment:
Q  1 tgtatatctacatacaactcaactacacatatatttcatatgacttactactccgagaattctaacaatccagaacatacacaattaattataattatgc 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  12866 tgtatatctacatacaactcaactacacatatatctcatatgacttactactccgagagttctaacaatccagaacatacacaattaattataattatgc 12767  T
Q  101 gcatacatcaatttcattcaatagttatatattcacttgattcctcactcaatcatctccaaaattcactaacattaaccaattcgatcaccggcttgtt 200  Q
    ||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12766 gcatacatcaatttcattcaatagttatacattcacttgatttcttactcaatcatctccaaaattcactaacatcaaccaattcgatcaccggcttgtt 12667  T
Q  201 ctagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcacgaagcaaaagttcagaaa 300  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12666 ctagtaggattctgatacctatacaagggatatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcacgaagcaaaagttcagaaa 12567  T
Q  301 gaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacgg 400  Q
    |||||||||||||||||||||||||||||                    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12566 gaggctgactaaggctcacttcgcttaag--------------------cgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacgg 12487  T
Q  401 ttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 450  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12486 ttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 12437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 292; Significance: 1e-164; HSPs: 2)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 1 - 395
Target Start/End: Original strand, 2753 - 3147
Alignment:
Q  1 tgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgagaattctaacaatccagaacatacacaattaattataattatg 99  Q
    |||||||||||||||||||||||||  |||||| ||||||||||||||||||||||  || || |||||||||||||||| ||||||| |||||||||||    
T  2753 tgtatatctacatacaactcaactaatacatatgtttcatatgacttactactccgc-aactcaaacaatccagaacatagacaattatttataattatg 2851  T
Q  100 cgcatacatcaatttcattcaatagttatatattcacttgattcctcactcaatcatctccaaaattcactaacattaaccaattcgatcaccggcttgt 199  Q
    |||||||||||| ||||||||||| |||||||||||| ||||| |  |||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  2852 cgcatacatcaaattcattcaataattatatattcacatgatttcaaactcaatcatctccaatattcactaacatcaaccaattcgatcaccggcttgt 2951  T
Q  200 tctagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcacgaagcaaaagttcagaa 299  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2952 tctagtgggattctggtacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcacgaagcaaaagttcagaa 3051  T
Q  300 agaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgct 395  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||| || |||||||    
T  3052 agaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaagcgaccggcttacagtaggtctgggtttcgctcgctcacagttcgct 3147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 415
Target Start/End: Original strand, 3181 - 3217
Alignment:
Q  379 ctcgcttacggttcgctcacggttcgcttgagcgaac 415  Q
    ||||||||||||||||||||||||||||| |||||||    
T  3181 ctcgcttacggttcgctcacggttcgcttaagcgaac 3217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 257; Significance: 1e-143; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 447
Target Start/End: Original strand, 26582862 - 26583313
Alignment:
Q  1 tgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgagaattctaacaatccagaacatacacaattaattataattatg 99  Q
    ||||||||||||||||||| |||||  |||||| ||| ||||||||||||||||||  || || |||||||||||||||||||||||| |||||||||||    
T  26582862 tgtatatctacatacaacttaactattacatatgttttatatgacttactactccgc-aactcaaacaatccagaacatacacaattatttataattatg 26582960  T
Q  100 cgcatacatcaatttcattcaa-----tagttatatattcacttgattcctcactcaatcatctccaaaattcactaacattaaccaattcgatcaccgg 194  Q
    |||||||||||||  ||||| |     ||  |||||||||||| |||| |  |||||||||||||||| ||| |||||||  || |||||||||||||||    
T  26582961 cgcatacatcaatcacattccacatgttatgtatatattcactcgatttcatactcaatcatctccaacatttactaacaccaatcaattcgatcaccgg 26583060  T
Q  195 cttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcacgaagcaaaagtt 294  Q
    || |||||| ||||| || | |||||| || |||||||||| ||||||| |||||||| ||||||||||||||||||||||| |||||||| ||||||||    
T  26583061 ctagttctaataggagtcggttacctacaccagggttatactagttaaaagaaatattatagaatgctcaagaagtcccctcctgcacgaaacaaaagtt 26583160  T
Q  295 cagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgc 394  Q
    |||||  |||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  26583161 cagaagaaggctgactaagacttacttcgcttaagcgacggctagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtcgc 26583260  T
Q  395 tcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 447  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26583261 tcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 26583313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 332
Target Start/End: Complemental strand, 23169288 - 23168954
Alignment:
Q  1 tgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgagaattctaacaatccagaacatacacaattaattataattatg 99  Q
    |||||||| ||||||||||| ||||  ||||||||||||||| |||||||||||||  || || |||||||||| ||||||||||| | |||||||||||    
T  23169288 tgtatatccacatacaactccactaatacatatatttcatataacttactactccgc-aactcaaacaatccagcacatacacaatcatttataattatg 23169190  T
Q  100 cgcatacatcaatttcattcaata-gttatata--ttcacttgattcctcactcaatcatctccaaaattcactaacattaaccaattcgatcaccggct 196  Q
    ||||||||||| |  ||||| | | ||||||||  ||||| ||||| |  |||||| ||||||||||||||| |||||| ||||||| |||||||| |      
T  23169189 cgcatacatcattcacattccacatgttatatacattcacatgatttcatactcaaacatctccaaaattcattaacatcaaccaatgcgatcaccagag 23169090  T
Q  197 tgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaaga-agtcccctcgtgcacgaagcaaaagttc 295  Q
    |||||||||||||| || |||||||||||||||||||||||||| || |||| |||||||||| | ||| |  ||||||| || |||||| | ||  |||    
T  23169089 tgttctagtaggatcctaatacctatacaagggttatacaagttgaaagaaacattttagaatacccaaaagggtcccctagtacacgaaac-aattttc 23168991  T
Q  296 agaaagaggctgactaaggctcacttcgcttaagcga 332  Q
    |||||||||||||||||| ||||  ||||||||||||    
T  23168990 agaaagaggctgactaagcctcagctcgcttaagcga 23168954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 332
Target Start/End: Complemental strand, 23580545 - 23580211
Alignment:
Q  1 tgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgagaattctaacaatccagaacatacacaattaattataattatg 99  Q
    |||||||| ||||||||||| ||||  ||||||||||||||| |||||||||||||  || || |||||||||| ||||||||||| | |||||||||||    
T  23580545 tgtatatccacatacaactccactaatacatatatttcatataacttactactccgc-aactcaaacaatccagcacatacacaatcatttataattatg 23580447  T
Q  100 cgcatacatcaatttcattcaata-gttatata--ttcacttgattcctcactcaatcatctccaaaattcactaacattaaccaattcgatcaccggct 196  Q
    ||||||||||| |  ||||| | | ||||||||  ||||| ||||| |  |||||| ||||||||||||||| |||||| ||||||| |||||||| |      
T  23580446 cgcatacatcattcacattccacatgttatatacattcacatgatttcatactcaaacatctccaaaattcattaacatcaaccaatgcgatcaccagag 23580347  T
Q  197 tgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaaga-agtcccctcgtgcacgaagcaaaagttc 295  Q
    |||||||||||||| || |||||||||||||||||||||||||| || |||| |||||||||| | ||| |  ||||||| || |||||| | ||  |||    
T  23580346 tgttctagtaggatcctaatacctatacaagggttatacaagttgaaagaaacattttagaatacccaaaagggtcccctagtacacgaaac-aattttc 23580248  T
Q  296 agaaagaggctgactaaggctcacttcgcttaagcga 332  Q
    |||||||||||||||||| ||||  ||||||||||||    
T  23580247 agaaagaggctgactaagcctcagctcgcttaagcga 23580211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 292 - 450
Target Start/End: Complemental strand, 5706768 - 5706610
Alignment:
Q  292 gttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtagg-tctgggttcagctcgcttacggt 390  Q
    ||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||| |||| ||||||||||     
T  5706768 gttcagaaa-aggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggctctgggctcagttcgcttacggg 5706670  T
Q  391 tcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 450  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  5706669 tcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttcgctcacagg 5706610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 298 - 453
Target Start/End: Original strand, 23878326 - 23878481
Alignment:
Q  298 aaagaggctgactaaggctca-cttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctc 396  Q
    |||| |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||     
T  23878326 aaagtggctgactaagg-tcatcttcgcttaagcgacggctagttcgcttaagcgaccggcttacagtaagtctgggttctgctcgcttacggttcgctt 23878424  T
Q  397 acggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacaggttc 453  Q
     | ||||||||||||||| |  || ||||||||||| ||||  ||||||||||||||    
T  23878425 gcagttcgcttgagcgaattcttggcagaatcaaaaaggttcctcgctcacaggttc 23878481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 277 - 400
Target Start/End: Original strand, 29281353 - 29281475
Alignment:
Q  277 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttc 376  Q
    |||||||||||||  ||||||||| |||||||||||  |||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  29281353 gtgcacgaagcaag-gttcagaaaaaggctgactaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggtctgggttc 29281451  T
Q  377 agctcgcttacggttcgctcacgg 400  Q
    || |||||||||| ||||||||||    
T  29281452 agttcgcttacgggtcgctcacgg 29281475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 269 - 431
Target Start/End: Complemental strand, 25181606 - 25181446
Alignment:
Q  269 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggt 368  Q
    ||||||| ||||||||||||| | |||||||| |||||||||||  |||| |||||||||||||||| ||||| |||||||||||| |||||||||||||    
T  25181606 gtcccctagtgcacgaagcaaga-ttcagaaa-aggctgactaacactcagttcgcttaagcgacggctagtttgcttaagcgaccagcttacagtaggt 25181509  T
Q  369 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 431  Q
    |||||||||| || ||||||| |||||||||| |||||| |||||| |  || ||||||||||    
T  25181508 ctgggttcagttcacttacgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 25181446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 293 - 431
Target Start/End: Original strand, 9949 - 10086
Alignment:
Q  293 ttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttc 392  Q
    |||||||| |||||| ||||  |||| || ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||    
T  9949 ttcagaaa-aggctgtctaacactcagtttgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggtctgggttcagttcgcttacgggtc 10047  T
Q  393 gctcacggttcgcttgagcgaacttctgacagaatcaaa 431  Q
    |||||||| |||||| |||||| |  || ||||||||||    
T  10048 gctcacggctcgcttaagcgaattcttggcagaatcaaa 10086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 220 - 453
Target Start/End: Original strand, 23062983 - 23063216
Alignment:
Q  220 tatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca 318  Q
    |||| |||||||||||||||| || |||| |||||  ||||||||| | | ||||||  ||||||| ||||| ||||| |||| ||||||||||||   |    
T  23062983 tatataagggttatacaagttgaaagaaacatttttaaatgctcaaaaggatcccctaatgcacgaggcaaa-gttcaaaaagtggctgactaaggtcaa 23063081  T
Q  319 cttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttc 418  Q
    ||||||||||||||||| | |||||||||||||||||||||||||   ||  |||||   |||||| |||  |||||  |||||||||| ||||||||||    
T  23063082 cttcgcttaagcgacggctggttcgcttaagcgaccggcttacagagagttggggtttcactcgctaacgcctcgcttgcggttcgcttaagcgaacttc 23063181  T
Q  419 tgacagaatcaaaatggtttttcgctcacaggttc 453  Q
    |||||||||  ||||| ||||||||| || |||||    
T  23063182 tgacagaatgcaaatgatttttcgcttacgggttc 23063216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 203 - 415
Target Start/End: Original strand, 26884489 - 26884701
Alignment:
Q  203 agtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaag 301  Q
    ||||||||| |||| |||||||||| |||||||||| |||| |||| |||| | ||| ||||| | | |||||| |||||||||||||  ||||||||||    
T  26884489 agtaggatt-tgatgcctatacaagagttatacaagctaaaagaaacatttaaaaatactcaaaagggtcccctagtgcacgaagcaag-gttcagaaag 26884586  T
Q  302 aggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttc-agctcgcttacggttcgctcacgg 400  Q
    ||||||||||||||||| ||||||||||||| || ||| |||||||||||||| ||  |||  ||||   |||||  ||||||| |||||| |||||| |    
T  26884587 aggctgactaaggctcagttcgcttaagcgaagggtagctcgcttaagcgaccagcacacaaaaggttgaggttctcgctcgctcacggttagctcacag 26884686  T
Q  401 ttcgcttgagcgaac 415  Q
    |||||||||||||||    
T  26884687 ttcgcttgagcgaac 26884701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 220 - 395
Target Start/End: Complemental strand, 23089779 - 23089604
Alignment:
Q  220 tatacaagggttatacaagttaaaggaaatattttagaatgctcaa-gaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca 318  Q
    |||| |||||||||||||||| ||||||  || ||  ||||||||| |  ||| |||  ||||||| ||||  ||||| |||| ||||||||||||   |    
T  23089779 tatataagggttatacaagttgaaggaaccatgtttcaatgctcaaaggggtctcctaatgcacgaggcaac-gttcaaaaagtggctgactaaggtcaa 23089681  T
Q  319 cttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgct 395  Q
    ||||||||||||||||   |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  23089680 cttcgcttaagcgacgtccagttcgcttaagcgaccggcttacagtaagtctgggttctgctcgcttacggttcgct 23089604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 220 - 395
Target Start/End: Complemental strand, 23102207 - 23102032
Alignment:
Q  220 tatacaagggttatacaagttaaaggaaatattttagaatgctcaa-gaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca 318  Q
    |||| |||||||||||||||| ||||||  || ||  ||||||||| |  ||| |||  ||||||| ||||  ||||| |||| ||||||||||||   |    
T  23102207 tatataagggttatacaagttgaaggaaccatgtttcaatgctcaaaggggtctcctaatgcacgaggcaac-gttcaaaaagtggctgactaaggtcaa 23102109  T
Q  319 cttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgct 395  Q
    ||||||||||||||||   |||||||||||| || |||||||||||| |||||||||| ||||||||||||||||||    
T  23102108 cttcgcttaagcgacgtccagttcgcttaagtgatcggcttacagtaagtctgggttctgctcgcttacggttcgct 23102032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 289 - 395
Target Start/End: Original strand, 21907746 - 21907852
Alignment:
Q  289 aaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttac 387  Q
    |||||||| |||| |||||||||||| ||| |||||||||||||| || ||||||||||||||||||||||||||| | ||  |||||| ||||||| ||    
T  21907746 aaagttcaaaaagtggctgactaagg-tcatcttcgcttaagcgatggctagttcgcttaagcgaccggcttacagaaagttggggttccgctcgctaac 21907844  T
Q  388 ggttcgct 395  Q
    ||||||||    
T  21907845 ggttcgct 21907852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 220 - 363
Target Start/End: Original strand, 24660876 - 24661019
Alignment:
Q  220 tatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca 318  Q
    ||||||| ||||||||||||| || |||| |||||| ||||||||| | | |||||| |||||||||| |||| |||| |||| ||||||||||| |       
T  24660876 tatacaaaggttatacaagttgaaagaaacattttaaaatgctcaaaaggatcccctagtgcacgaagtaaaa-ttcaaaaagtggctgactaagacctt 24660974  T
Q  319 cttcgcttaagcgacggttagttcgcttaagcgaccggcttacag 363  Q
    ||| ||||||||||||| | | |||||||||||||||||| ||||    
T  24660975 ctttgcttaagcgacggctggctcgcttaagcgaccggctcacag 24661019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 269 - 363
Target Start/End: Complemental strand, 27208417 - 27208324
Alignment:
Q  269 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacag 363  Q
    ||||||| ||||||||| |||  ||||||||| ||||||||||||||||| ||||||||||||| || ||| |||||||||||||| ||| ||||    
T  27208417 gtcccctagtgcacgaaacaag-gttcagaaaaaggctgactaaggctcagttcgcttaagcgaagggtagctcgcttaagcgaccagctcacag 27208324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 269 - 363
Target Start/End: Complemental strand, 27210752 - 27210659
Alignment:
Q  269 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacag 363  Q
    ||||||| ||||||||| |||  ||||||||| ||||||||||||||||| ||||||||||||| || ||| |||||||||||||| ||| ||||    
T  27210752 gtcccctagtgcacgaaacaag-gttcagaaaaaggctgactaaggctcagttcgcttaagcgaagggtagctcgcttaagcgaccagctcacag 27210659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 391 - 453
Target Start/End: Original strand, 23264551 - 23264613
Alignment:
Q  391 tcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacaggttc 453  Q
    ||||| ||||||||||||||||||||||||||| ||| |||||| ||||||||| || |||||    
T  23264551 tcgctaacggttcgcttgagcgaacttctgacataatgaaaatgatttttcgcttacgggttc 23264613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 230; Significance: 1e-127; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 447
Target Start/End: Complemental strand, 29615189 - 29614738
Alignment:
Q  1 tgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgagaattctaacaatccagaacatacacaattaattataattatg 99  Q
    |||||||||||||||||||| ||||  |||||| |||||||||||||||| |||||  || || |||||||||||||||||||||||| ||||||||||     
T  29615189 tgtatatctacatacaactcgactattacatatgtttcatatgacttactgctccgc-aactc-aacaatccagaacatacacaattatttataattatt 29615092  T
Q  100 cgcatacatcaatttcattcaata-gttatatat--------tcacttgattcctcactcaatcatctccaaaattcactaacattaaccaattcgatca 190  Q
    | |||||||||||  ||||| | | |||||||||        ||||||| || |  |||||||||||||||| ||| |||||||  || |||||| ||||    
T  29615091 cacatacatcaatcacattccacatgttatatatacacatattcacttgttttcatactcaatcatctccaacatttactaacaccaatcaattcaatca 29614992  T
Q  191 ccggcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcacgaagcaaa 290  Q
    |||||| |||||| || ||||||| ||||||| | |||||||||| |||||||||||||||| ||||||||||||||||| ||||| |||||||| ||||    
T  29614991 ccggctcgttctaataagattctgttacctatgccagggttatactagttaaaggaaatattatagaatgctcaagaagttccctcatgcacgaaacaaa 29614892  T
Q  291 agttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggt 390  Q
    |||||||||   ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||     
T  29614891 agttcagaa---ggctgactaaggctcacttcgcttaagcgacggctagttcgcttaagcgaccgacttacagtaggtctgggttcagctcgcttacggg 29614795  T
Q  391 tcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 447  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29614794 ttgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 29614738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 255 - 450
Target Start/End: Original strand, 12167637 - 12167832
Alignment:
Q  255 agaatgctcaagaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgacc 354  Q
    |||| ||||||||||||||||| ||||| |||||| |||||||||| ||||||| ||||| |||||||||||||||||||| ||||||||||||||||||    
T  12167637 agaacgctcaagaagtcccctcatgcactaagcaacagttcagaaa-aggctgattaaggttcacttcgcttaagcgacggctagttcgcttaagcgacc 12167735  T
Q  355 ggcttacagtaggt-ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 450  Q
     ||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  12167736 agcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacagg 12167832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 255 - 450
Target Start/End: Original strand, 19286546 - 19286741
Alignment:
Q  255 agaatgctcaagaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgacc 354  Q
    |||| ||||||||||||||||| ||||| |||||| |||||||||| ||||||| ||||| |||||||||||||||||||| ||||||||||||||||||    
T  19286546 agaacgctcaagaagtcccctcatgcactaagcaacagttcagaaa-aggctgattaaggttcacttcgcttaagcgacggctagttcgcttaagcgacc 19286644  T
Q  355 ggcttacagtaggt-ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 450  Q
     ||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  19286645 agcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacagg 19286741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 255 - 448
Target Start/End: Original strand, 19877730 - 19877923
Alignment:
Q  255 agaatgctcaagaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgacc 354  Q
    |||| ||||||||||||||||| ||||| |||||| |||||||||| ||||||| ||||| |||||||||||||||||||| ||||||||||||||||||    
T  19877730 agaacgctcaagaagtcccctcatgcactaagcaacagttcagaaa-aggctgattaaggttcacttcgcttaagcgacggctagttcgcttaagcgacc 19877828  T
Q  355 ggcttacagtaggt-ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcaca 448  Q
     ||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||    
T  19877829 agcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcaca 19877923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 255 - 450
Target Start/End: Original strand, 19883506 - 19883701
Alignment:
Q  255 agaatgctcaagaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgacc 354  Q
    |||| ||||||||||||||||| ||||| |||||| |||||||||| ||||| | ||||| |||||||||||||||||||| ||||||||||||||||||    
T  19883506 agaacgctcaagaagtcccctcatgcactaagcaacagttcagaaa-aggctaattaaggttcacttcgcttaagcgacggctagttcgcttaagcgacc 19883604  T
Q  355 ggcttacagtaggt-ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 450  Q
     ||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  19883605 agcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacagg 19883701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 255 - 450
Target Start/End: Complemental strand, 19786650 - 19786455
Alignment:
Q  255 agaatgctcaagaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgacc 354  Q
    |||| ||||||||||||||||| ||||  |||||| |||||||||| ||||||| ||||| |||||||||||||||||||| ||||||||||||||||||    
T  19786650 agaacgctcaagaagtcccctcatgcattaagcaacagttcagaaa-aggctgattaaggttcacttcgcttaagcgacggctagttcgcttaagcgacc 19786552  T
Q  355 ggcttacagtaggt-ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 450  Q
     ||||||||||||| |||||||||  |||||||||| |||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  19786551 agcttacagtaggttctgggttcacttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacagg 19786455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 292 - 450
Target Start/End: Complemental strand, 34640733 - 34640575
Alignment:
Q  292 gttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtagg-tctgggttcagctcgcttacggt 390  Q
    ||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||| |||| ||||||||||     
T  34640733 gttcagaaa-aggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggctctgggctcagttcgcttacggg 34640635  T
Q  391 tcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 450  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  34640634 tcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttcgctcacagg 34640575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 292 - 450
Target Start/End: Complemental strand, 34647407 - 34647249
Alignment:
Q  292 gttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtagg-tctgggttcagctcgcttacggt 390  Q
    ||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||| |||| ||||||||||     
T  34647407 gttcagaaa-aggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggctctgggctcagttcgcttacggg 34647309  T
Q  391 tcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 450  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  34647308 tcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttcgctcacagg 34647249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 290 - 450
Target Start/End: Complemental strand, 25470451 - 25470290
Alignment:
Q  290 aagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggt-ctgggttcagctcgcttacg 388  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||  ||||||||||||||||||  |||||||||||| ||||| |||| |||||||||    
T  25470451 aagttcagaaaaaggctgactaaggttcacttcgcttaagcgacgtctagttcgcttaagcgaccaacttacagtaggttctgggctcagttcgcttacg 25470352  T
Q  389 gttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 450  Q
    | |||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||    
T  25470351 ggtcgctcacggttcgcttgagcgaattttggacagaatcaaaatggtttttcgctcacagg 25470290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 315 - 448
Target Start/End: Complemental strand, 21365200 - 21365067
Alignment:
Q  315 ctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaa 414  Q
    |||| |||||||||||||||| ||| ||||||||||||||  |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  21365200 ctcagttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaa 21365101  T
Q  415 cttctgacagaatcaaaatggtttttcgctcaca 448  Q
    |||  |||||||||||||||||||||||||||||    
T  21365100 ctttggacagaatcaaaatggtttttcgctcaca 21365067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 315 - 448
Target Start/End: Complemental strand, 23969182 - 23969049
Alignment:
Q  315 ctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaa 414  Q
    |||| |||||||||||||||| ||| ||||||||||||||  |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  23969182 ctcagttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaa 23969083  T
Q  415 cttctgacagaatcaaaatggtttttcgctcaca 448  Q
    |||  |||||||||||||||||||||||||||||    
T  23969082 ctttggacagaatcaaaatggtttttcgctcaca 23969049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 289 - 395
Target Start/End: Original strand, 18799818 - 18799924
Alignment:
Q  289 aaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacg 388  Q
    |||||||| |||| |||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  18799818 aaagttcaaaaagtggctgactaaggttgacttcgcttaagcgacggctagttcgcttaagcgaccggcttacagtaagtctgggttccgctcgcttacg 18799917  T
Q  389 gttcgct 395  Q
    |||||||    
T  18799918 gttcgct 18799924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 80 - 395
Target Start/End: Original strand, 25396343 - 25396658
Alignment:
Q  80 cacaattaattataattatgcgcatacatcaatttcattcaa--tagttatatattcacttgattcctcactcaatcatctccaaaattcactaacatta 177  Q
    |||||||||| ||||| || |  || |||||| |||||||||  |||| ||||||||||||| || |  |||||||||| |||||||||||||||  | |    
T  25396343 cacaattaataataatcatactaatgcatcaagttcattcaacctagt-atatattcacttggtttcatactcaatcatatccaaaattcactaaattca 25396441  T
Q  178 accaattcgatcaccggcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctc 276  Q
    ||||||||||| |||    ||||  |||||||||| | | | ||||||||||||||||||||| || |||| |||||||||||||||| | | | ||||     
T  25396442 accaattcgattaccaatgtgtttcagtaggattcag-tgcatatacaagggttatacaagttgaaagaaacattttagaatgctcaaaaggattcccta 25396540  T
Q  277 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttc 376  Q
    |||||| ||||| || |||| |||| || |||||||| |  |||||||||||||||||| | | ||||||||||||||| |||||||   ||  ||||||    
T  25396541 gtgcactaagcataa-ttcaaaaagtggttgactaagacctacttcgcttaagcgacggctggctcgcttaagcgaccgacttacagagagttggggttc 25396639  T
Q  377 agctcgcttacggttcgct 395  Q
     ||||||| ||||||||||    
T  25396640 cgctcgctaacggttcgct 25396658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 293 - 431
Target Start/End: Complemental strand, 20008630 - 20008493
Alignment:
Q  293 ttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttc 392  Q
    |||||||| |||||| ||||  |||| ||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||    
T  20008630 ttcagaaa-aggctgtctaacactcagttcgcttaagcaacggctagttcgcttaagcgaccagcttacagtaggtctgggttcagttcgcttacgggtc 20008532  T
Q  393 gctcacggttcgcttgagcgaacttctgacagaatcaaa 431  Q
    |||||||| |||||| |||||| |  || ||||||||||    
T  20008531 gctcacggctcgcttaagcgaattcttggcagaatcaaa 20008493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 220 - 395
Target Start/End: Complemental strand, 21565936 - 21565761
Alignment:
Q  220 tatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca 318  Q
    |||| |||||||||||||||| ||||||  || ||  ||||||||| | | || |||  ||||||| ||||  ||||| |||| ||||||||||||   |    
T  21565936 tatataagggttatacaagttgaaggaaccatgtttcaatgctcaaaagggtctcctaatgcacgaggcaac-gttcaaaaagtggctgactaaggtcaa 21565838  T
Q  319 cttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgct 395  Q
    ||||||||||||||||   |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  21565837 cttcgcttaagcgacgtccagttcgcttaagcgaccggcttacagtaagtctgggttctgctcgcttacggttcgct 21565761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 203 - 354
Target Start/End: Complemental strand, 19300509 - 19300359
Alignment:
Q  203 agtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaag 301  Q
    ||||||||| |||| ||||||||||||||||||||| |||| |||| | || | ||| ||||| | | |||||| |||||||||||||| ||||||| ||    
T  19300509 agtaggatt-tgatgcctatacaagggttatacaagctaaaagaaacacttaaaaatactcaaaagggtcccctagtgcacgaagcaaa-gttcagatag 19300412  T
Q  302 aggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgacc 354  Q
    |||||||||||||||||  |||||||||||| || ||| ||||||||||||||    
T  19300411 aggctgactaaggctcatctcgcttaagcgaagggtagctcgcttaagcgacc 19300359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 228 - 420
Target Start/End: Complemental strand, 19472082 - 19471891
Alignment:
Q  228 ggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgctt 326  Q
    ||||||||||||| ||||||| |||| | ||||||||| | | |||||| ||||||||||||||| |||| |||| ||||||| ||| |   ||||||||    
T  19472082 ggttatacaagttgaaggaaacatttcaaaatgctcaaaaggatcccctagtgcacgaagcaaaa-ttcaaaaagtggctgac-aagaccttcttcgctt 19471985  T
Q  327 aagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctg 420  Q
    |||||| || | | |||||||||||||||||| |||| | ||  |||||| ||||||| |||| |||||  |||||||||| ||||||||||||    
T  19471984 aagcgatggctggctcgcttaagcgaccggctcacagaaagttggggttccgctcgctaacggctcgcttgcggttcgcttaagcgaacttctg 19471891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 19786861 - 19786751
Alignment:
Q  1 tgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgagaattctaacaatccagaacatacacaattaattataattatg 99  Q
    |||||||||||||||||||| ||||| |||||| | ||||||||||||||||||| | || || ||||||||||| | |||||||||| |||||||||||    
T  19786861 tgtatatctacatacaactcgactactacatatgtatcatatgacttactactcc-ataactcaaacaatccaga-cttacacaattatttataattatg 19786764  T
Q  100 cgcatacatcaat 112  Q
    | |||||||||||    
T  19786763 cacatacatcaat 19786751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 12167425 - 12167535
Alignment:
Q  1 tgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgagaattctaacaatccagaacatacacaattaattataattatg 99  Q
    |||||||||||||||||||| || || |||||| | ||||||||||||||||||| | || || ||||||||||| | |||||||||| |||||||||||    
T  12167425 tgtatatctacatacaactcgaccactacatatgtatcatatgacttactactcc-acaactcaaacaatccaga-cttacacaattatttataattatg 12167522  T
Q  100 cgcatacatcaat 112  Q
    | |||||||||||    
T  12167523 cacatacatcaat 12167535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 19877518 - 19877628
Alignment:
Q  1 tgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgagaattctaacaatccagaacatacacaattaattataattatg 99  Q
    |||||||||||||||||||| || || |||||| | ||||||||||||||||||| | || || ||||||||||| | |||||||||| |||||||||||    
T  19877518 tgtatatctacatacaactcgaccactacatatgtatcatatgacttactactcc-acaactcaaacaatccaga-cttacacaattatttataattatg 19877615  T
Q  100 cgcatacatcaat 112  Q
    | |||||||||||    
T  19877616 cacatacatcaat 19877628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 19883294 - 19883404
Alignment:
Q  1 tgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgagaattctaacaatccagaacatacacaattaattataattatg 99  Q
    |||||||||||||||||||| || || |||||| | ||||||||||||||||||| | || || ||||||||||| | |||||||||| |||||||||||    
T  19883294 tgtatatctacatacaactcgaccactacatatgtatcatatgacttactactcc-acaactcaaacaatccaga-cttacacaattatttataattatg 19883391  T
Q  100 cgcatacatcaat 112  Q
    | |||||||||||    
T  19883392 cacatacatcaat 19883404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 19286334 - 19286444
Alignment:
Q  1 tgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgagaattctaacaatccagaacatacacaattaattataattatg 99  Q
    |||||||||||||||||||| || || |||||| | | ||||||||||||||||| | || || ||||||||||| | |||||||||| |||||||||||    
T  19286334 tgtatatctacatacaactcgaccactacatatgtataatatgacttactactcc-acaactcaaacaatccaga-cttacacaattatttataattatg 19286431  T
Q  100 cgcatacatcaat 112  Q
    | |||||||||||    
T  19286432 cacatacatcaat 19286444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 277 - 415
Target Start/End: Original strand, 29097221 - 29097359
Alignment:
Q  277 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttc 376  Q
    ||||||||||||||| ||||||||  ||||||||||  |||| |||||||||||||||  ||| |||||||||||||| ||| |||  ||||   ||| |    
T  29097221 gtgcacgaagcaaaa-ttcagaaaagggctgactaacactcagttcgcttaagcgacgagtagctcgcttaagcgaccagctcacacaaggttgaggtcc 29097319  T
Q  377 -agctcgcttacggttcgctcacggttcgcttgagcgaac 415  Q
      ||||||| ||||||||||| | |||||||| |||||||    
T  29097320 tcgctcgctcacggttcgctcgcagttcgcttaagcgaac 29097359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 354
Target Start/End: Complemental strand, 9099770 - 9099694
Alignment:
Q  277 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgacc 354  Q
    ||||||||||||||| ||||||||  ||||||||||  |||| |||||||||||||||  ||| ||||||||||||||    
T  9099770 gtgcacgaagcaaaa-ttcagaaaagggctgactaacactcagttcgcttaagcgacgagtagctcgcttaagcgacc 9099694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 269 - 354
Target Start/End: Complemental strand, 11289378 - 11289294
Alignment:
Q  269 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgacc 354  Q
    ||||||| |||||||| ||||| |||||||||| ||||| ||||||||||  |||||||||||| || ||| | ||||||||||||    
T  11289378 gtcccctagtgcacgaggcaaa-gttcagaaaggggctggctaaggctcagctcgcttaagcgaagggtagcttgcttaagcgacc 11289294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 391 - 450
Target Start/End: Complemental strand, 24513429 - 24513370
Alignment:
Q  391 tcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 450  Q
    ||||| ||||||||||||||||||||||||  ||||| |||||| ||||||||| |||||    
T  24513429 tcgctaacggttcgcttgagcgaacttctggaagaatgaaaatgatttttcgcttacagg 24513370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 395
Target Start/End: Complemental strand, 24513469 - 24513414
Alignment:
Q  340 ttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgct 395  Q
    ||||||||||||||||||| |||| | || ||||||| ||||||| ||||||||||    
T  24513469 ttcgcttaagcgaccggctcacagaaagtttgggttccgctcgctaacggttcgct 24513414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 415
Target Start/End: Original strand, 31251879 - 31251916
Alignment:
Q  378 gctcgcttacggttcgctcacggttcgcttgagcgaac 415  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  31251879 gctcgctcacggttcgctcacagttcgcttgagcgaac 31251916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 270 - 333
Target Start/End: Original strand, 9186841 - 9186903
Alignment:
Q  270 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaagcgac 333  Q
    |||||| |||||||||||||| ||||| |||| |||||||||||| ||| |||||||||||||||    
T  9186841 tcccctagtgcacgaagcaaa-gttcaaaaagtggctgactaagg-tcatcttcgcttaagcgac 9186903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 227; Significance: 1e-125; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 447
Target Start/End: Complemental strand, 41456137 - 41455687
Alignment:
Q  1 tgtatatctacatacaactcaactaca-catatatttcatatgacttactactccgagaattctaacaatccagaacatacacaattaattataattatg 99  Q
    |||||||||||||||||||||||||   ||||| ||||||||||||||||||||||  || || |||||| |||||||| |||||||| |||||||||||    
T  41456137 tgtatatctacatacaactcaactaatgcatatgtttcatatgacttactactccgt-aactcaaacaattcagaacattcacaattatttataattatg 41456039  T
Q  100 cgcatacatcaatttcattcaatagttatatattcacttgat--tcctcactcaatcatctccaaaattcactaacattaaccaattcgatcaccggctt 197  Q
    ||| ||||||||||||||||||||||| ||||||||||| ||  |||| ||||||| |||||||| ||| |||||||  || |||||||||  || ||||    
T  41456038 cgcttacatcaatttcattcaatagttgtatattcacttaatcttcct-actcaattatctccaacatttactaacaccaatcaattcgattgccagctt 41455940  T
Q  198 gttctagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcacgaagcaaaagttcag 297  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||   |  ||  |||| ||||| ||||||||||| ||||| |||||| |||||||    
T  41455939 gttctagtaggattctgatacctatactaggattatacaagttaaagaggaagttaaagaacgctcaggaagtcccctcatgcactaagcaacagttcag 41455840  T
Q  298 aaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtagg-tctgggttcagctcgcttacggttcgctc 396  Q
    ||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||| |||||||||| ||||||    
T  41455839 aaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggttctgggttcagttcgcttacgggtcgctc 41455740  T
Q  397 acggttcgcttgagcgaacttctgacagaatcaaaa--tggtttttcgctcac 447  Q
    |||||||||||||||||||||  |||||||||||||  |||||||||||||||    
T  41455739 acggttcgcttgagcgaactttggacagaatcaaaaattggtttttcgctcac 41455687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 1 - 453
Target Start/End: Original strand, 18914195 - 18914646
Alignment:
Q  1 tgtatatctacatacaactcaactacacatatatttcatatgacttactactccgagaattctaacaatccagaacatacacaattaattataattatgc 100  Q
    ||||||||||||||||||| ||| | |||||| ||||||||||||||| ||||||  ||||| |||||||||||||||||||||||||||||||||||||    
T  18914195 tgtatatctacatacaacttaacaatacatatgtttcatatgacttacaactccgc-aattccaacaatccagaacatacacaattaattataattatgc 18914293  T
Q  101 gcatacatcaatttcattcaata-gttatatattcacttgattcctcactcaatcatctccaaaattcactaacattaaccaattcgatcaccggcttgt 199  Q
     |||||||||||||||||||| |   ||||||||||||||||| |  ||||||||||||||||||||||||||||| ||| ||||| ||||   |  |||    
T  18914294 tcatacatcaatttcattcaacataatatatattcacttgatttcatactcaatcatctccaaaattcactaacatcaactaattccatcaatagagtgt 18914393  T
Q  200 tctagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcaga 298  Q
    | |||||||||| || |   |||| || |||||||||||||  | |||||||| |   |||||||| | | ||||||  ||||||| |||||| |||| |    
T  18914394 tttagtaggattatg-tgtatatataaaggttatacaagttggaagaaatattattatatgctcaaaaggatcccctaatgcacgaggcaaaaattca-a 18914491  T
Q  299 aagaggctgactaaggctca-cttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctca 397  Q
    ||| |||||||||||| ||| |||||||||||||| ||   |||||||||||||||||||||| ||   ||  |||||| ||||||| | ||||||||      
T  18914492 aagtggctgactaagg-tcatcttcgcttaagcgatggcaggttcgcttaagcgaccggcttatagagagttggggttccgctcgctaaaggttcgcttg 18914590  T
Q  398 cggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacaggttc 453  Q
    |||||| ||| |||||||||||| ||||||  || || ||||||||| || |||||    
T  18914591 cggttcacttaagcgaacttctggcagaatggaattgatttttcgcttacgggttc 18914646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 303 - 447
Target Start/End: Original strand, 24192274 - 24192418
Alignment:
Q  303 ggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggtt 402  Q
    ||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  24192274 ggctgactaaggtccacttcgcttaagcgacggctagttcgcttaagcgaccggcttacagtaagtctgggttcaactcacttacggttcgctcacggtt 24192373  T
Q  403 cgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 447  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  24192374 cgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 24192418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 277 - 414
Target Start/End: Original strand, 14865201 - 14865338
Alignment:
Q  277 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcga-cggttagttcgcttaagcgaccggcttacagtaggtctgggtt 375  Q
    |||||||||||||  ||||||||| |||||||||||  |||| ||||||||||||| ||| |||||||||||||||||| ||||| ||||||||||||||    
T  14865201 gtgcacgaagcaag-gttcagaaaaaggctgactaacactcagttcgcttaagcgaacggctagttcgcttaagcgaccagcttagagtaggtctgggtt 14865299  T
Q  376 cagctcgcttacggttcgctcacggttcgcttgagcgaa 414  Q
    ||| |||||||||| |||||||||| |||||| ||||||    
T  14865300 cagttcgcttacgggtcgctcacggctcgcttaagcgaa 14865338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 289 - 395
Target Start/End: Complemental strand, 16802143 - 16802037
Alignment:
Q  289 aaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacg 388  Q
    |||||||| |||| |||| |||||||   ||||||||||| |||||| ||| ||||||||||||||||||||||||| |||||||||| |||||||||||    
T  16802143 aaagttcaaaaagtggctaactaaggtcaacttcgcttaaacgacggctagctcgcttaagcgaccggcttacagtaagtctgggttctgctcgcttacg 16802044  T
Q  389 gttcgct 395  Q
    |||||||    
T  16802043 gttcgct 16802037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 292 - 393
Target Start/End: Complemental strand, 55499799 - 55499698
Alignment:
Q  292 gttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggtt 391  Q
    ||||| |||| |||||||||||    |||||||||||||||||  ||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||    
T  55499799 gttcaaaaagtggctgactaagatcaacttcgcttaagcgacgtctagttcgcttaagcgaccggcttacagtaagtctaggttctgctcgcttacggtt 55499700  T
Q  392 cg 393  Q
    ||    
T  55499699 cg 55499698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 202 - 389
Target Start/End: Complemental strand, 13324562 - 13324376
Alignment:
Q  202 tagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaa 300  Q
    |||||||||| || ||||||||||||||||||| ||| | || |||| || || |||||||||| | | ||||||  |||||||||||||| ||||||||    
T  13324562 tagtaggatt-tgttacctatacaagggttatataagctgaaagaaacatctttgaatgctcaaaagggtcccctaatgcacgaagcaaaa-ttcagaaa 13324465  T
Q  301 gaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgg 389  Q
    | ||||||||||||||||  |||||||||||| || | | ||||||||||||| ||||| ||| | || ||||||  ||||||| ||||    
T  13324464 gtggctgactaaggctcagctcgcttaagcgaaggctggctcgcttaagcgactggcttgcagaaagtttgggttttgctcgctgacgg 13324376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 18136174 - 18136117
Alignment:
Q  64 aacaatccagaacatacacaattaattataattatgcgcatacatcaatttcattcaa 121  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18136174 aacaatccagaacatacacaattaattataattatgctcatacatcaatttcattcaa 18136117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 337 - 453
Target Start/End: Complemental strand, 17241201 - 17241085
Alignment:
Q  337 tagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggt 436  Q
    ||||||||||||||||||| |||| ||   ||  |||||| ||||||| ||||||||||  |||||||||||||||||||||||||||||| ||| || |    
T  17241201 tagttcgcttaagcgaccgacttatagagagttggggttccgctcgctgacggttcgcttgcggttcgcttgagcgaacttctgacagaatgaaattgat 17241102  T
Q  437 ttttcgctcacaggttc 453  Q
    |||||||| || |||||    
T  17241101 ttttcgcttacgggttc 17241085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 271 - 449
Target Start/End: Complemental strand, 10415301 - 10415123
Alignment:
Q  271 cccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtagg-tc 369  Q
    ||||| ||||||||||||||| |||||||| ||| | |||||| | || ||||||||||||| ||  || |||||||||||||| ||| |||| |   ||    
T  10415301 cccctagtgcacgaagcaaaa-ttcagaaa-aggttaactaagacccagttcgcttaagcgaagggcagctcgcttaagcgaccagct-acaggaaaatc 10415205  T
Q  370 tgggttcagct-cgcttacggttcgctcacg-gttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacag 449  Q
    | ||||||| | |||| |||||||||||||  ||||||||||||||| ||  ||||||||||||||||||||||||||||||    
T  10415204 taggttcaggttcgctcacggttcgctcacaagttcgcttgagcgaaatttggacagaatcaaaatggtttttcgctcacag 10415123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 271 - 449
Target Start/End: Complemental strand, 10421971 - 10421793
Alignment:
Q  271 cccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtagg-tc 369  Q
    ||||| ||||||||||||||| |||||||| ||| | |||||| | || ||||||||||||| ||  || |||||||||||||| ||| |||| |   ||    
T  10421971 cccctagtgcacgaagcaaaa-ttcagaaa-aggttaactaagacccagttcgcttaagcgaagggcagctcgcttaagcgaccagct-acaggaaaatc 10421875  T
Q  370 tgggttcagct-cgcttacggttcgctcacg-gttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacag 449  Q
    | ||||||| | |||| |||||||||||||  ||||||||||||||| ||  ||||||||||||||||||||||||||||||    
T  10421874 taggttcaggttcgctcacggttcgctcacaagttcgcttgagcgaaatttggacagaatcaaaatggtttttcgctcacag 10421793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 338 - 431
Target Start/End: Original strand, 17131147 - 17131240
Alignment:
Q  338 agttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 431  Q
    |||||||||||| |||| ||||||||||||||||||||||| |||||||||| ||||||| || |||||| |||||| |  || ||||||||||    
T  17131147 agttcgcttaagtgaccagcttacagtaggtctgggttcagttcgcttacgggtcgctcatggctcgcttaagcgaattcttggcagaatcaaa 17131240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 202 - 333
Target Start/End: Complemental strand, 13302974 - 13302844
Alignment:
Q  202 tagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaa 300  Q
    |||||||||| || ||||||||||||||||||| ||| | || |||| || || |||||||||| | | ||||||  |||||||||||||| ||||||||    
T  13302974 tagtaggatt-tgttacctatacaagggttatataagctgaaagaaacatctttgaatgctcaaaagggtcccctaatgcacgaagcaaaa-ttcagaaa 13302877  T
Q  301 gaggctgactaaggctcacttcgcttaagcgac 333  Q
    | ||||||||||||||||  |||||||||||||    
T  13302876 gtggctgactaaggctcagctcgcttaagcgac 13302844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 202 - 333
Target Start/End: Complemental strand, 13313650 - 13313520
Alignment:
Q  202 tagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaa 300  Q
    |||||||||| || ||||||||||||||||||| ||| | || |||| || ||  ||||||||| | | ||||||  |||||||||||||| ||||||||    
T  13313650 tagtaggatt-tgttacctatacaagggttatataagctgaaagaaacatctttaaatgctcaaaagggtcccctaatgcacgaagcaaaa-ttcagaaa 13313553  T
Q  301 gaggctgactaaggctcacttcgcttaagcgac 333  Q
    | ||||||||||||||||  |||||||||||||    
T  13313552 gtggctgactaaggctcagctcgcttaagcgac 13313520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 380 - 449
Target Start/End: Complemental strand, 10390104 - 10390034
Alignment:
Q  380 tcgcttacggttcgctcacg-gttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacag 449  Q
    ||||| |||||||||||||  ||||||||||||||| ||  ||||||||||||||||||||||||||||||    
T  10390104 tcgctcacggttcgctcacaagttcgcttgagcgaaatttggacagaatcaaaatggtttttcgctcacag 10390034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 395
Target Start/End: Complemental strand, 12034072 - 12034015
Alignment:
Q  338 agttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgct 395  Q
    ||||||||||||||||| |||||||||||||||||||| || |||||||||| |||||    
T  12034072 agttcgcttaagcgaccagcttacagtaggtctgggtttagttcgcttacgggtcgct 12034015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 277 - 415
Target Start/End: Complemental strand, 19235767 - 19235629
Alignment:
Q  277 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttc 376  Q
    ||||||||||||||| ||||||||  ||||||||||  |||| |||||||||||||||  ||| |||||||||||||| ||| |||  ||||   ||| |    
T  19235767 gtgcacgaagcaaaa-ttcagaaaagggctgactaacactcagttcgcttaagcgacgagtagctcgcttaagcgaccagctcacacaaggttgaggtcc 19235669  T
Q  377 -agctcgcttacggttcgctcacggttcgcttgagcgaac 415  Q
      ||||||| ||||||||||| | |||||||| |||||||    
T  19235668 tcgctcgctcacggttcgctcgcagttcgcttaagcgaac 19235629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 64 - 117
Target Start/End: Complemental strand, 18129660 - 18129607
Alignment:
Q  64 aacaatccagaacatacacaattaattataattatgcgcatacatcaatttcat 117  Q
    |||||| |||||||| ||||||||||||||||||||| | ||||||||||||||    
T  18129660 aacaattcagaacattcacaattaattataattatgctcgtacatcaatttcat 18129607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 269 - 333
Target Start/End: Complemental strand, 12034119 - 12034057
Alignment:
Q  269 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgac 333  Q
    ||||||| |||||||||||||  |||||||||  |||||||||| ||||| ||||||||||||||    
T  12034119 gtcccctagtgcacgaagcaag-gttcagaaat-ggctgactaacgctcagttcgcttaagcgac 12034057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 168; Significance: 8e-90; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 1 - 447
Target Start/End: Complemental strand, 13123961 - 13123506
Alignment:
Q  1 tgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgagaattctaacaatccagaacatacacaattaattataattatg 99  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||| | || || | |||| ||||||||||||||||| |||||||||||    
T  13123961 tgtatatctacatacaactcaactactacatatatttcatatgacttaatactcc-acaactcga-caattcagaacatacacaattatttataattatg 13123864  T
Q  100 cgcatacatcaatttcattcaata-gttata----------tattcacttgattcctcactcaatcatctccaaaattcactaacattaaccaattcgat 188  Q
    | |||||||||||  |||||   | ||||||          |||||||||  || |  || |||||| | |||| ||| ||||| |  || |||| | ||    
T  13123863 cacatacatcaatcacattcctcatgttatacatatatacgtattcacttatttacatacacaatcaacaccaacatttactaataccaatcaatccaat 13123764  T
Q  189 caccggcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcacgaagca 288  Q
    ||||||||||||||| |||| ||||| |||||| || | |||||||| ||||||||   |  || ||||||||||||||||||||||| ||||| ||| |    
T  13123763 caccggcttgttctaataggcttctgctacctacaccaaggttatactagttaaagaggaagttatagaatgctcaagaagtcccctcatgcactaagta 13123664  T
Q  289 aaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacg 388  Q
    | |||||||||| |||||||||||| ||||||||||||||||||||| ||| ||||||||||||||  |||||||||||||||||||||| |||||||||    
T  13123663 atagttcagaaa-aggctgactaagactcacttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacg 13123565  T
Q  389 gttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 447  Q
    | |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  13123564 ggtcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttcgctcac 13123506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 192 - 447
Target Start/End: Original strand, 13742921 - 13743174
Alignment:
Q  192 cggcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcacgaagcaaaa 291  Q
    ||||| |||||| |||||||| | |||||| || |||||||||| ||||||| |||||||| ||||||||||||||||||||||| |||||||| |||||    
T  13742921 cggctcgttctaataggattcggttacctacaccagggttatactagttaaaagaaatattatagaatgctcaagaagtcccctcatgcacgaaacaaaa 13743020  T
Q  292 gttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggtt 391  Q
    ||||||||   ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| |    
T  13743021 gttcagaa---ggctgactaaggctcacttcgcttaagcgacggctagttcgcttaagcgaccggcttatagtaggtctgggttcagctcgcttacgggt 13743117  T
Q  392 cgctcacggttcgcttgagcgaacttctgacagaatc-aaaatggtttttcgctcac 447  Q
    ||||||||||||||||||||||||||  ||||||||| ||||| |||||||||||||    
T  13743118 cgctcacggttcgcttgagcgaactttggacagaatcaaaaattgtttttcgctcac 13743174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 1 - 447
Target Start/End: Complemental strand, 12710890 - 12710435
Alignment:
Q  1 tgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgagaattctaacaatccagaacatacacaattaattataattatg 99  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||| | || || | |||| ||||||||||||||||| |||||||||||    
T  12710890 tgtatatctacatacaactcaactactacatatatttcatatgacttaatactcc-ataactcga-caattcagaacatacacaattatttataattatg 12710793  T
Q  100 cgcatacatcaatttcattcaata-gttata----------tattcacttgattcctcactcaatcatctccaaaattcactaacattaaccaattcgat 188  Q
    | |||||||||||  |||||   | ||||||          |||||||||  || |  || |||||| | |||| ||| ||||| |  || |||| | ||    
T  12710792 cacatacatcaatcacattcctcatgttatacatatatacgtattcacttatttacatacacaatcaacaccaacatttactaataccaatcaatccaat 12710693  T
Q  189 caccggcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcacgaagca 288  Q
    |||||||||||| || |||| ||||  |||||| || | |||||||| ||||||||   |  || ||||||||||||||||||||||| ||||| ||| |    
T  12710692 caccggcttgttataataggcttcttctacctacaccaaggttatactagttaaagaggaagttatagaatgctcaagaagtcccctcatgcactaagta 12710593  T
Q  289 aaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacg 388  Q
    | |||||||||| |||||||||||| ||||||||||||||||||||| ||| ||||||||||||||  |||||||||||||||||||||| ||||||||     
T  12710592 atagttcagaaa-aggctgactaagactcacttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttaca 12710494  T
Q  389 gttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 447  Q
    | |||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||    
T  12710493 ggtcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttggctcac 12710435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 255 - 450
Target Start/End: Original strand, 13006706 - 13006901
Alignment:
Q  255 agaatgctcaagaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgacc 354  Q
    |||| ||||||||||||||||| ||||| |||||| |||||||||| ||||||| ||||| |||||||||||||||||||| ||||||||||||||||||    
T  13006706 agaacgctcaagaagtcccctcatgcactaagcaacagttcagaaa-aggctgattaaggttcacttcgcttaagcgacggctagttcgcttaagcgacc 13006804  T
Q  355 ggcttacagtaggt-ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 450  Q
     ||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  13006805 agcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacagg 13006901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 292 - 450
Target Start/End: Complemental strand, 12591389 - 12591230
Alignment:
Q  292 gttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtagg-tctgggttcagctcgcttacggt 390  Q
    ||||||||| | ||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||| |||| ||||||||||     
T  12591389 gttcagaaaaacgctgactaaggttcacttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggatctgggatcagttcgcttacggg 12591290  T
Q  391 tcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 450  Q
    |||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||    
T  12591289 tcgctcacggttcgcttgagcgaaatttggacagaatcaaaatggtttttcgctcacagg 12591230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 315 - 448
Target Start/End: Complemental strand, 3858087 - 3857953
Alignment:
Q  315 ctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaa 414  Q
    |||| |||||||||||||||| ||| ||||||||||||||  |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  3858087 ctcagttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaa 3857988  T
Q  415 cttctgacagaatc-aaaatggtttttcgctcaca 448  Q
    |||   |||||||| ||||||||||||||||||||    
T  3857987 ctttgaacagaatcaaaaatggtttttcgctcaca 3857953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 293 - 431
Target Start/End: Original strand, 2464736 - 2464874
Alignment:
Q  293 ttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttc 392  Q
    |||||||| || || |||||  |||| |||||||||||||||| ||| ||||||||||||||  |||||||||||||||||||||| |||||||||| ||    
T  2464736 ttcagaaaaagactaactaacactcagttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtc 2464835  T
Q  393 gctcacggttcgcttgagcgaacttctgacagaatcaaa 431  Q
    |||||||||||||||| ||||||||  ||||||||||||    
T  2464836 gctcacggttcgcttgggcgaactttggacagaatcaaa 2464874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 277 - 431
Target Start/End: Original strand, 16090442 - 16090595
Alignment:
Q  277 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttc 376  Q
    |||||||||||||  ||||||||| |||||||||||  |||| |||||||||||||||| ||| ||||||||||||||  ||||||||||||||||||||    
T  16090442 gtgcacgaagcaag-gttcagaaaaaggctgactaacactcagttcgcttaagcgacggctagctcgcttaagcgaccatcttacagtaggtctgggttc 16090540  T
Q  377 agctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 431  Q
    || |||||||||| |||||||||| | |||| |||||| |  || ||||||||||    
T  16090541 agttcgcttacgggtcgctcacggcttgcttaagcgaattcttggcagaatcaaa 16090595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 220 - 453
Target Start/End: Original strand, 16676623 - 16676845
Alignment:
Q  220 tatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca 318  Q
    |||| |||||||||||||||| ||||||  || ||  ||||||||| | | ||||||  ||||||| ||||  ||||| |||| ||||||||||||   |    
T  16676623 tatataagggttatacaagttgaaggaaccatgtttcaatgctcaaaagggtcccctaatgcacgaggcaac-gttcaaaaagtggctgactaaggtcaa 16676721  T
Q  319 cttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttc 418  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||| ||||||||           | |||||||||||||||| |      
T  16676722 cttcgcttaagcgacgactagttcgcttaagcgaccggcttacagtaagtctgggttccgctcgctt-----------atggttcgcttgagcgaattct 16676810  T
Q  419 tgacagaatcaaaatggtttttcgctcacaggttc 453  Q
    |||||||||||||||||||||||||| ||||||||    
T  16676811 tgacagaatcaaaatggtttttcgcttacaggttc 16676845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 220 - 453
Target Start/End: Original strand, 17650859 - 17651081
Alignment:
Q  220 tatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca 318  Q
    |||| |||||||||||||||| ||||||  || ||  ||||||||| | | ||||||  ||||||| ||||  ||||| |||| ||||||||||||   |    
T  17650859 tatataagggttatacaagttgaaggaaccatgtttcaatgctcaaaagggtcccctaatgcacgaggcaac-gttcaaaaagtggctgactaaggtcaa 17650957  T
Q  319 cttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttc 418  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||| ||||||||           | |||||||||||||||| |      
T  17650958 cttcgcttaagcgacgactagttcgcttaagcgaccggcttacagtaagtctgggttccgctcgctt-----------atggttcgcttgagcgaattct 17651046  T
Q  419 tgacagaatcaaaatggtttttcgctcacaggttc 453  Q
    |||||||||||||||||||||||||| ||||||||    
T  17651047 tgacagaatcaaaatggtttttcgcttacaggttc 17651081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 277 - 431
Target Start/End: Complemental strand, 29181807 - 29181654
Alignment:
Q  277 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttc 376  Q
    |||||||||||||  ||||||||| || ||||||||  |||| || ||||||||||||| ||| ||||||||||||||  ||||||||||||||||||||    
T  29181807 gtgcacgaagcaag-gttcagaaaaagactgactaacactcagtttgcttaagcgacggctagctcgcttaagcgaccatcttacagtaggtctgggttc 29181709  T
Q  377 agctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 431  Q
    || ||||||| || |||||||||| |||||| ||||||||  || ||||||||||    
T  29181708 agttcgcttatgggtcgctcacggctcgcttaagcgaactcttggcagaatcaaa 29181654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 319 - 431
Target Start/End: Complemental strand, 20311709 - 20311597
Alignment:
Q  319 cttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttc 418  Q
    ||||||||||||||||| ||| ||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||  |||||||||| |||||| |      
T  20311709 cttcgcttaagcgacggctagctcgcttaagcgaccggcttgcagtaagtctgggttctgctcgcttacggttcgcttgcggttcgcttaagcgaattct 20311610  T
Q  419 tgacagaatcaaa 431  Q
    || ||||||||||    
T  20311609 tggcagaatcaaa 20311597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 228 - 453
Target Start/End: Original strand, 13678770 - 13678995
Alignment:
Q  228 ggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgct 325  Q
    |||||||||| || || |||| |||||  ||||||||| | | ||||||  ||||||| ||||| ||||| |||| |||||||||||| ||| |||||||    
T  13678770 ggttatacaaattgaaagaaacattttttaatgctcaaaaggatcccctaatgcacgaggcaaa-gttcaaaaagtggctgactaagg-tcatcttcgct 13678867  T
Q  326 taagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacaga 425  Q
    |||||||||| | |||||||||||||||||||||||||   ||  |||||   |||||| ||| ||||||  |||||||||| |||||||||||||||||    
T  13678868 taagcgacggctggttcgcttaagcgaccggcttacagagagttggggtttccctcgctaacgtttcgcttgcggttcgcttaagcgaacttctgacaga 13678967  T
Q  426 atcaaaatggtttttcgctcacaggttc 453  Q
    ||  ||||| ||||||||| || |||||    
T  13678968 atggaaatgatttttcgcttacgggttc 13678995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 13742692 - 13742803
Alignment:
Q  1 tgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgagaattctaacaatccagaacatacacaattaattataattatg 99  Q
    |||||||| ||||||||||| ||||  |||||| ||||||||||||||||||||| | || || |||||||||||||||||||||||| |||||||||||    
T  13742692 tgtatatcaacatacaactcgactattacatatgtttcatatgacttactactcc-acaactcaaacaatccagaacatacacaattatttataattatg 13742790  T
Q  100 cgcatacatcaat 112  Q
    | |||||||||||    
T  13742791 ctcatacatcaat 13742803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 289 - 395
Target Start/End: Complemental strand, 11390024 - 11389918
Alignment:
Q  289 aaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttac 387  Q
    |||||||| |||| |||||||||||| ||| ||||||||||||||||| ||| ||||||||||||||| || |||||| |||||||||| ||||||||||    
T  11390024 aaagttcaaaaagtggctgactaagg-tcatcttcgcttaagcgacggctagctcgcttaagcgaccgactcacagtaagtctgggttccgctcgcttac 11389926  T
Q  388 ggttcgct 395  Q
    ||||||||    
T  11389925 ggttcgct 11389918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 292 - 415
Target Start/End: Complemental strand, 14320316 - 14320192
Alignment:
Q  292 gttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttc-agctcgcttacggt 390  Q
    ||||||||| ||||||||||||||||| ||||||||||||| || ||| |||||||||||||||||| |||| | ||   ||| |  ||||||| || ||    
T  14320316 gttcagaaaaaggctgactaaggctcagttcgcttaagcgaagggtagctcgcttaagcgaccggctcacagaaagttgaggtcctcgctcgctcacagt 14320217  T
Q  391 tcgctcacggttcgcttgagcgaac 415  Q
    |||||||||||||||||||||||||    
T  14320216 tcgctcacggttcgcttgagcgaac 14320192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 220 - 425
Target Start/End: Original strand, 46625259 - 46625464
Alignment:
Q  220 tatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca 318  Q
    ||||| ||||| ||||||||| || |||| |||||| ||||||||| | | | |||| ||||||||| ||||| |||| | || ||||||||||| |  |    
T  46625259 tataccagggtcatacaagttgaaagaaacattttaaaatgctcaaaaggattccctagtgcacgaaacaaaa-ttcaaagagtggctgactaagaccta 46625357  T
Q  319 cttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttc 418  Q
    ||||||||||||||||| | | |||||||||||||| ||||||||   ||  | |||| ||||||| | |||| |||| |||||||||| ||||||||||    
T  46625358 cttcgcttaagcgacggctggctcgcttaagcgacctgcttacagagagttggcgttctgctcgctaatggtttgctcgcggttcgcttaagcgaacttc 46625457  T
Q  419 tgacaga 425  Q
    || ||||    
T  46625458 tggcaga 46625464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 270 - 385
Target Start/End: Complemental strand, 11383554 - 11383440
Alignment:
Q  270 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggt 368  Q
    |||||| |||||||| ||||| ||||| |||| |||||||||||| ||| ||||||||||||||||| ||| ||||||||||||| |||| |||||| ||    
T  11383554 tcccctagtgcacgaggcaaa-gttcaaaaagtggctgactaagg-tcatcttcgcttaagcgacggctagctcgcttaagcgacaggctcacagtaagt 11383457  T
Q  369 ctgggttcagctcgctt 385  Q
    |||||||| ||||||||    
T  11383456 ctgggttccgctcgctt 11383440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 338 - 431
Target Start/End: Original strand, 2966383 - 2966476
Alignment:
Q  338 agttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 431  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||| || ||| |||||| |||||| |||||| |  || ||||||||||    
T  2966383 agttcgcttaagcgaccagcttacagtaggtctgggttcagttcgcttatgggtcgttcacggctcgcttaagcgaattcttggcagaatcaaa 2966476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 338 - 431
Target Start/End: Complemental strand, 20907086 - 20906993
Alignment:
Q  338 agttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 431  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||| | |||| |||||| |||||| |||||| |  || ||||||||||    
T  20907086 agttcgcttaagcgaccagcttacagtaggtctgggttcagttcgcttatgtttcgttcacggctcgcttaagcgaattcttggcagaatcaaa 20906993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 13006494 - 13006604
Alignment:
Q  1 tgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgagaattctaacaatccagaacatacacaattaattataattatg 99  Q
    |||||||||||||||||||| || || |||||| | | ||||||||||||||||| | || || ||||||||||| | |||||||||| |||||||||||    
T  13006494 tgtatatctacatacaactcgaccactacatatgtataatatgacttactactcc-acaactcaaacaatccaga-cttacacaattatttataattatg 13006591  T
Q  100 cgcatacatcaat 112  Q
    | |||||||||||    
T  13006592 cacatacatcaat 13006604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 13318007 - 13318051
Alignment:
Q  64 aacaatccagaacatacacaattaattataattatgcgcatacat 108  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||    
T  13318007 aacaatccagaaattacacaattaatcataattatgcgcatacat 13318051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 380 - 427
Target Start/End: Original strand, 13678982 - 13679030
Alignment:
Q  380 tcgcttacgg-ttcgctcacggttcgcttgagcgaacttctgacagaat 427  Q
    |||||||||| |||||||||||||||||||||||| | |||||||||||    
T  13678982 tcgcttacgggttcgctcacggttcgcttgagcgagcgtctgacagaat 13679030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 69 - 123
Target Start/End: Complemental strand, 16475983 - 16475929
Alignment:
Q  69 tccagaacatacacaattaattataattatgcgcatacatcaatttcattcaata 123  Q
    ||||||| ||||||||||||| ||||| |||| |||||||| | |||||||||||    
T  16475983 tccagaaaatacacaattaatcataatcatgctcatacatcgagttcattcaata 16475929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 441
Target Start/End: Complemental strand, 21231582 - 21231532
Alignment:
Q  391 tcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttc 441  Q
    ||||| ||||||||||||||||||||||||  ||||| |||||| ||||||    
T  21231582 tcgctgacggttcgcttgagcgaacttctggtagaatgaaaatgatttttc 21231532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 395
Target Start/End: Complemental strand, 21231690 - 21231567
Alignment:
Q  270 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggt 368  Q
    |||||| |||||||| ||||| ||||| |||| ||||||| |||| ||| ||||||||||||||||   |||| |||||||||||| ||| |||| | ||    
T  21231690 tcccctagtgcacgaggcaaa-gttca-aaagtggctgacaaagg-tcatcttcgcttaagcgacgaccagtttgcttaagcgaccagctcacagaaagt 21231594  T
Q  369 ctgggttcagctcgcttacggttcgct 395  Q
      |||||| ||||||| ||||||||||    
T  21231593 tggggttccgctcgctgacggttcgct 21231567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 416
Target Start/End: Original strand, 13664450 - 13664487
Alignment:
Q  380 tcgcttacgg-ttcgctcacggttcgcttgagcgaact 416  Q
    |||||||||| |||||||||||||||||||||||||||    
T  13664450 tcgcttacgggttcgctcacggttcgcttgagcgaact 13664487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 354
Target Start/End: Original strand, 46625551 - 46625584
Alignment:
Q  321 tcgcttaagcgacggttagttcgcttaagcgacc 354  Q
    ||||||||||||||| ||||||||||||||||||    
T  46625551 tcgcttaagcgacgggtagttcgcttaagcgacc 46625584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 269 - 333
Target Start/End: Complemental strand, 20907133 - 20907071
Alignment:
Q  269 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgac 333  Q
    ||||||| ||||||||||||| | |||||| | ||||||||||| ||||| ||||||||||||||    
T  20907133 gtcccctagtgcacgaagcaaga-ttcagata-aggctgactaacgctcagttcgcttaagcgac 20907071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 270 - 354
Target Start/End: Original strand, 31154742 - 31154825
Alignment:
Q  270 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgacc 354  Q
    |||||| |||||||| ||||| ||||||||| ||| | |||||| | || ||||||||||||| ||  || ||||||||||||||    
T  31154742 tcccctagtgcacgaggcaaa-gttcagaaaaaggttaactaagacccagttcgcttaagcgaagggcagctcgcttaagcgacc 31154825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 165; Significance: 5e-88; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 126 - 450
Target Start/End: Complemental strand, 8046744 - 8046420
Alignment:
Q  126 tatatattcacttgattcctcactcaatcatctccaaaattcactaacattaaccaattcgatcaccggcttgttctagtaggattctgatacctataca 225  Q
    |||||||||||||| || |  || ||||||||||||| ||| |||||||  || |||| | ||| ||||||||||||| |||||||| | |||||| ||     
T  8046744 tatatattcacttgttttcatacacaatcatctccaacatttactaacaccaatcaatccaatcgccggcttgttctaataggattcggttacctacacc 8046645  T
Q  226 agggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgct 325  Q
    |||||||||| ||||||||   |  || ||||||||||||||||||||||| ||||| ||| || |||||||||| ||||||||||||||||||||||||    
T  8046644 agggttatactagttaaagaggaagttatagaatgctcaagaagtcccctcatgcactaagtaacagttcagaaaaaggctgactaaggctcacttcgct 8046545  T
Q  326 taagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacaga 425  Q
    |||||||||  ||| ||||||||||||||  |||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||  ||||||    
T  8046544 taagcgacgtctagctcgcttaagcgaccaacttatagtaggtctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacaga 8046445  T
Q  426 atcaaaatggtttttcgctcacagg 450  Q
    |||||||||||||||||||||||||    
T  8046444 atcaaaatggtttttcgctcacagg 8046420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 292 - 450
Target Start/End: Original strand, 53483013 - 53483171
Alignment:
Q  292 gttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtagg-tctgggttcagctcgcttacggt 390  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||  ||||||||||||||||| |||||||||||| |||||| |||| ||||||||||     
T  53483013 gttcagaaa-aggctgactaaggttcacttcgcttaagcgacggcaagttcgcttaagcgaccagcttacagtaggctctgggctcagttcgcttacggg 53483111  T
Q  391 tcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 450  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  53483112 tcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttcgctcacagg 53483171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 277 - 431
Target Start/End: Complemental strand, 16147529 - 16147376
Alignment:
Q  277 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttc 376  Q
    |||||||||||||  ||||||||| |||||||||||  |||| |||||||||||||||| ||| ||||||||||||||  ||||||||||||||||||||    
T  16147529 gtgcacgaagcaag-gttcagaaaaaggctgactaacactcagttcgcttaagcgacggctagctcgcttaagcgaccatcttacagtaggtctgggttc 16147431  T
Q  377 agctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 431  Q
    || |||||||||| |||||||||| |||||| |||||| |  || ||||||||||    
T  16147430 agttcgcttacgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 16147376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 269 - 431
Target Start/End: Original strand, 11847453 - 11847614
Alignment:
Q  269 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggt 368  Q
    ||||||| |||||| ||||||| |||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||  | ||||| | ||    
T  11847453 gtcccctagtgcacaaagcaaa-gttcagaaagaggctgactaaggctcagctcgcttaagcgacgggtagttcgcttaagcgaccaac-tacaggaagt 11847550  T
Q  369 ctgggttc-agctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 431  Q
     ||| ||| ||||||||||||| ||||||||||||||||| |||||| |  || ||||||||||    
T  11847551 ttggattctagctcgcttacgggtcgctcacggttcgcttaagcgaattcttggcagaatcaaa 11847614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 272 - 425
Target Start/End: Original strand, 15244566 - 15244719
Alignment:
Q  272 ccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctg 371  Q
    |||| ||||||||||||||| |||| |||| ||||||||||| |   ||||| |||||||||||||   |||||||||||||||||||||||   ||  |    
T  15244566 ccctagtgcacgaagcaaaatttcaaaaagtggctgactaagaccttcttcgattaagcgacggttgactcgcttaagcgaccggcttacagagagttgg 15244665  T
Q  372 ggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacaga 425  Q
     |||| ||||||| | || ||||||||||||||||| |||||||||||||||||    
T  15244666 cgttccgctcgctaatggctcgctcacggttcgcttaagcgaacttctgacaga 15244719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 270 - 453
Target Start/End: Original strand, 15407438 - 15407608
Alignment:
Q  270 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggt 368  Q
    |||||| |||||||| ||||| ||||| |||| ||||||||| || ||| |||||||||||||||||  ||||||||||||||||||||| |||| | ||    
T  15407438 tcccctagtgcacgaggcaaa-gttca-aaagtggctgactatgg-tcatcttcgcttaagcgacggccagttcgcttaagcgaccggctcacagaaagt 15407534  T
Q  369 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacaggttc 453  Q
    || ||||| ||           ||||| |||||||||||||||||||||||| ||||||||||||||||||||||| || |||||    
T  15407535 ctaggttccgc-----------tcgctgacggttcgcttgagcgaacttctggcagaatcaaaatggtttttcgcttacgggttc 15407608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 303 - 395
Target Start/End: Original strand, 14486052 - 14486144
Alignment:
Q  303 ggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgct 395  Q
    |||||||||||||||||||||||||||||| || | | |||||||||||||||||||||||   || ||||||| ||||||| ||||||||||    
T  14486052 ggctgactaaggctcacttcgcttaagcgaaggctggctcgcttaagcgaccggcttacagagagtttgggttccgctcgctcacggttcgct 14486144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 14555938 - 14555881
Alignment:
Q  64 aacaatccagaacatacacaattaattataattatgcgcatacatcaatttcattcaa 121  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  14555938 aacaatccagaacaaacacaattaattataattatgctcatacatcaatttcattcaa 14555881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 272 - 425
Target Start/End: Original strand, 13887138 - 13887289
Alignment:
Q  272 ccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctg 371  Q
    |||| ||||||||||||||| |||| |||| |||| |||||| |   ||||||||||||||||| | | |||||||| ||||||||||||||   ||  |    
T  13887138 ccctagtgcacgaagcaaaa-ttca-aaagtggctaactaagaccttcttcgcttaagcgacggctggctcgcttaaacgaccggcttacagagagttgg 13887235  T
Q  372 ggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacaga 425  Q
     |||| ||||||| | ||||||| |||||||||||| ||| |||||||||||||    
T  13887236 cgttctgctcgctaatggttcgcgcacggttcgcttaagcaaacttctgacaga 13887289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 272 - 425
Target Start/End: Original strand, 13887995 - 13888146
Alignment:
Q  272 ccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctg 371  Q
    |||| ||||||||||||||| |||| |||| |||| |||||| |   ||||||||||||||||| | | |||||||| ||||||||||||||   ||  |    
T  13887995 ccctagtgcacgaagcaaaa-ttca-aaagtggctaactaagaccttcttcgcttaagcgacggctggctcgcttaaacgaccggcttacagagagttgg 13888092  T
Q  372 ggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacaga 425  Q
     |||| ||||||| | ||||||| |||||||||||| ||| |||||||||||||    
T  13888093 cgttctgctcgctaatggttcgcgcacggttcgcttaagcaaacttctgacaga 13888146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 272 - 421
Target Start/End: Original strand, 15307471 - 15307620
Alignment:
Q  272 ccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctg 371  Q
    |||| ||||||||||||||  |||  |||| ||||||||||| |   |||||||||||||| || | | ||||||||||||||| |||||||   ||  |    
T  15307471 ccctagtgcacgaagcaaagtttcgaaaagtggctgactaagaccttcttcgcttaagcgatggctggctcgcttaagcgaccgacttacagagagttgg 15307570  T
Q  372 ggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctga 421  Q
     |||| ||||||| | || ||||||||||||||||| |||||||||||||    
T  15307571 cgttccgctcgctaatggctcgctcacggttcgcttaagcgaacttctga 15307620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 8046887 - 8046777
Alignment:
Q  1 tgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgagaattctaacaatccagaacatacacaattaattataattatg 99  Q
    |||||||||||||||||||| ||||  |||||||||||||||||||||||||||| | || || |  |||||| | |||||||||||| |||||||||||    
T  8046887 tgtatatctacatacaactcgactattacatatatttcatatgacttactactcc-acaactc-agtaatccaaatcatacacaattatttataattatg 8046790  T
Q  100 cgcatacatcaat 112  Q
    | || ||||||||    
T  8046789 cacacacatcaat 8046777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 202 - 265
Target Start/End: Original strand, 14485975 - 14486037
Alignment:
Q  202 tagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaa 265  Q
    |||||||||| |||||||||||||||||||||||||| | || |||| ||||||||||||||||    
T  14485975 tagtaggatt-tgatacctatacaagggttatacaagctgaaagaaacattttagaatgctcaa 14486037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 352
Target Start/End: Original strand, 27905613 - 27905695
Alignment:
Q  269 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcga 352  Q
    |||||||  |||||||||||||| ||||||||| |||||||| |||||||  |||||||||||| || ||| ||||||||||||    
T  27905613 gtcccctaatgcacgaagcaaaaattcagaaagtggctgact-aggctcagctcgcttaagcgaagggtagctcgcttaagcga 27905695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 158; Significance: 8e-84; HSPs: 2)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 126 - 447
Target Start/End: Original strand, 324 - 644
Alignment:
Q  126 tatatattcacttgattcctcactcaatcatctccaaaattcactaacattaaccaattcgatcaccggcttgttctagtaggattctgatacctataca 225  Q
    |||||||||||||| || |  || | ||||||||||| ||| |||||||  || |||| | ||||| ||||||||||| |||||||| | |||||| ||     
T  324 tatatattcacttgttttcatacaccatcatctccaacatttactaacaccaatcaatccaatcactggcttgttctaataggattcggttacctacacc 423  T
Q  226 agggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgct 325  Q
    | |||||||| ||||||||   |  || ||||||||||||||||||||||| ||||| ||| || |||||||||| |||||||||||| |||||||||||    
T  424 aaggttatactagttaaagaggaagttatagaatgctcaagaagtcccctcatgcactaagtaatagttcagaaa-aggctgactaagactcacttcgct 522  T
Q  326 taagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacaga 425  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||  ||||||    
T  523 taagcgacggctagttcgcttaagcgaccagcttacagtaggtctgggttcagttcgcttacgggtcgctcacggttcgattgagcgaactttggacaga 622  T
Q  426 atcaaaatggtttttcgctcac 447  Q
    ||||||||||||||||||||||    
T  623 atcaaaatggtttttcgctcac 644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 159 - 269
Alignment:
Q  1 tgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgagaattctaacaatccagaacatacacaattaattataattatg 99  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||| | |  || |||||||||||||||||||||||| |||||||||||    
T  159 tgtatatctacatacaactcaactattacatatatttcatatgacttactactcc-acagctc-aacaatccagaacatacacaattatttataattatg 256  T
Q  100 cgcatacatcaat 112  Q
    | || ||||||||    
T  257 cacacacatcaat 269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 157; Significance: 3e-83; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 1 - 447
Target Start/End: Original strand, 23865621 - 23866078
Alignment:
Q  1 tgtatatctacatacaactcaactaca-catatatttcatat-gacttactactccgagaattctaacaatccagaacatacacaattaattataattat 98  Q
    |||||||||||||||||||||||||   |||||||||||||| ||||||||||||||  || || |||||| ||||||||||||||||| ||||||||||    
T  23865621 tgtatatctacatacaactcaactaatgcatatatttcatattgacttactactccgt-aactc-aacaattcagaacatacacaattatttataattat 23865718  T
Q  99 gcgcatacatcaatttcattcaata-gttata----------tattcacttgattcctcactcaatcatctccaaaattcactaacattaaccaattcga 187  Q
    || |||||||||||  |||||   | ||||||          |||||||||  || |  || ||||||   |||| ||| ||||| |  || |||| | |    
T  23865719 gcacatacatcaatcacattcctcatgttatacatatacacgtattcacttatttacatacacaatcaataccaacatttactaataccaatcaatccaa 23865818  T
Q  188 tcaccggcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcacgaagc 287  Q
    |||||||||||||||| |||| ||||| |||||| || | |||||||| ||||||||   |  || ||||||||||||||||||||||| ||||| |||     
T  23865819 tcaccggcttgttctaataggcttctgctacctacaccaaggttatactagttaaagaggaagttatagaatgctcaagaagtcccctcatgcactaagt 23865918  T
Q  288 aaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttac 387  Q
    || |||||||||| |||||||||||| ||||||||||||||||||||| ||| ||||||||||||||  |||||||||||||||||||||| ||||||||    
T  23865919 aatagttcagaaaaaggctgactaagactcacttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttac 23866018  T
Q  388 ggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 447  Q
    || |||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||    
T  23866019 gggtcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttcgatcac 23866078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 340 - 450
Target Start/End: Original strand, 17053949 - 17054060
Alignment:
Q  340 ttcgcttaagcgaccggcttacagtaggt-ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggttt 438  Q
    ||||||||||||||| ||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||  |||||||| ||||||||||    
T  17053949 ttcgcttaagcgaccagcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggttt 17054048  T
Q  439 ttcgctcacagg 450  Q
    ||||||||||||    
T  17054049 ttcgctcacagg 17054060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 269 - 431
Target Start/End: Complemental strand, 24321376 - 24321216
Alignment:
Q  269 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggt 368  Q
    ||||||| ||| ||||||||| | |||||||| |||||| ||||  |||| |||||||||||||||| |||||||||||||||||| |||||||||||||    
T  24321376 gtcccctagtgtacgaagcaaga-ttcagaaa-aggctgtctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggt 24321279  T
Q  369 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 431  Q
    |||||||||| |||||||||| |||||||||| |||||| |||||| |  || ||||||||||    
T  24321278 ctgggttcagttcgcttacgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 24321216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 19902918 - 19902808
Alignment:
Q  1 tgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgagaattctaacaatccagaacatacacaattaattataattatg 99  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||| | || ||  ||||||||||||||||||||||| ||||||| |||    
T  19902918 tgtatatctacatacaactcaactactacatatatttcatatgacttaatactcc-acaactc-gacaatccagaacatacacaattatttataatcatg 19902821  T
Q  100 cgcatacatcaat 112  Q
    | |||||||||||    
T  19902820 cacatacatcaat 19902808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 270 - 453
Target Start/End: Original strand, 25111338 - 25111508
Alignment:
Q  270 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggt 368  Q
    |||||| |||||||| ||||| ||||| |||| ||||||||| || ||| |||||||||||||||||  |||||||||||||||||| || |||| | ||    
T  25111338 tcccctagtgcacgaggcaaa-gttca-aaagtggctgactatgg-tcatcttcgcttaagcgacggccagttcgcttaagcgaccgactcacagaaagt 25111434  T
Q  369 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacaggttc 453  Q
    |||||||| ||           ||||| |||||||||||||||||||||||| ||||||||||||||||||||||| || |||||    
T  25111435 ctgggttccgc-----------tcgctgacggttcgcttgagcgaacttctggcagaatcaaaatggtttttcgcttacgggttc 25111508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 319 - 453
Target Start/End: Complemental strand, 14057271 - 14057148
Alignment:
Q  319 cttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttc 418  Q
    ||||||||||||||||| ||| |||||||||||||||||| |||| | |||||||||| ||           ||||| |||||||||||||||||||||     
T  14057271 cttcgcttaagcgacggctagctcgcttaagcgaccggctcacagaaagtctgggttccgc-----------tcgctgacggttcgcttgagcgaactta 14057183  T
Q  419 tgacagaatcaaaatggtttttcgctcacaggttc 453  Q
    || |||||||||||||||||||| ||||| |||||    
T  14057182 tggcagaatcaaaatggtttttcactcacgggttc 14057148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 66 - 121
Target Start/End: Complemental strand, 19988045 - 19987990
Alignment:
Q  66 caatccagaacatacacaattaattataattatgcgcatacatcaatttcattcaa 121  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  19988045 caatccagaacatacacaattaattacaattatgctcatacatcaatttcattcaa 19987990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 228 - 395
Target Start/End: Original strand, 18613529 - 18613695
Alignment:
Q  228 ggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgct 325  Q
    ||||||||||||| || | || |||||  ||||||||||| | |||||| |||||||| ||||| ||||| |||| ||| |||||||| ||| |||||||    
T  18613529 ggttatacaagttgaaaggaacatttttaaatgctcaagaggatcccctagtgcacgaggcaaa-gttca-aaagtggccgactaagg-tcatcttcgct 18613625  T
Q  326 taagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgct 395  Q
    |||||||||| | |||||||||||||||| ||||||||   ||  |||||| ||||||| ||||||||||    
T  18613626 taagcgacggctggttcgcttaagcgacctgcttacagagagttggggttccgctcgctaacggttcgct 18613695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 21282247 - 21282300
Alignment:
Q  1 tgtatatctacatacaactcaactacacatatat-ttcatatgacttactactc 53  Q
    ||||||||||||||||||||||| | |||||||| | |||||||||||| ||||    
T  21282247 tgtatatctacatacaactcaaccatacatatatgtacatatgacttacaactc 21282300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 264
Target Start/End: Original strand, 21931018 - 21931062
Alignment:
Q  220 tatacaagggttatacaagttaaaggaaatattttagaatgctca 264  Q
    ||||||| ||||||||||||| || |||| |||||||||||||||    
T  21931018 tatacaaaggttatacaagttgaaagaaacattttagaatgctca 21931062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 152; Significance: 3e-80; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 1 - 447
Target Start/End: Complemental strand, 9622 - 9167
Alignment:
Q  1 tgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgagaattctaacaatccagaacatacacaattaattataattatg 99  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||| | || || | |||||||||||||| ||||||| ||||||| |||    
T  9622 tgtatatctacatacaactcaactactacatatatttcatatgacttaatactcc-acaactcga-caatccagaacatatacaattatttataatcatg 9525  T
Q  100 cgcatacatcaatttcattcaata-gttata----------tattcacttgattcctcactcaatcatctccaaaattcactaacattaaccaattcgat 188  Q
    | |||||||||||  ||||||  | ||||||          |||||||||  || |  || |||||| | |||| ||| |||||    || |||| |  |    
T  9524 cacatacatcaatcacattcatcatgttatacatatatacgtattcacttattttcatacacaatcaacaccaacatttactaatgccaatcaatccagt 9425  T
Q  189 caccggcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcacgaagca 288  Q
    ||||||||||||||| |||| ||||| |||||| || | |||||||| ||||||||   |  ||  |||||||||||||||||||||| ||||| ||| |    
T  9424 caccggcttgttctaataggcttctgctacctacaccaaggttatactagttaaagaggaagttacagaatgctcaagaagtcccctcatgcactaagta 9325  T
Q  289 aaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacg 388  Q
    |||||| ||||| |||||||||||| ||||||||||||||||||||| ||| ||||||||||||||  |||||||||||||||||||||| ||||||| |    
T  9324 aaagtttagaaa-aggctgactaagactcacttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttatg 9226  T
Q  389 gttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 447  Q
    | |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  9225 ggtcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttcgctcac 9167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 143; Significance: 7e-75; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 1 - 447
Target Start/End: Original strand, 110945 - 111378
Alignment:
Q  1 tgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgagaattctaacaatccagaacatacacaattaattataattatg 99  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||| | || || | ||||||||||| |||||||||| ||||||||| |    
T  110945 tgtatatctacatacaactcaactattacatatatttcatatgacttactactcc-acaactcga-caatccagaacctacacaattatttataattacg 111042  T
Q  100 cgcatacatcaatttcattcaata-gttatatat--------tcacttgattcctcactcaatcatctccaaaattcactaacattaaccaattcgatca 190  Q
    | |||||||||||  ||||| | | |||||||||        ||||||| || |  || ||||||||||||| ||| |||||||  || |||| | ||||    
T  111043 cacatacatcaatcacattccacatgttatatatatacatattcacttgttttcatacacaatcatctccaacatttactaacaccaatcaatccaatca 111142  T
Q  191 ccggcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcacgaagcaaa 290  Q
    ||||||||||||| |||||||| | |||||| || |||||||||| |||||||||| | ||| ||||||||||||||||||||||| ||||| ||| ||     
T  111143 ccggcttgttctaataggattcagttacctacaccagggttatactagttaaaggagaaattatagaatgctcaagaagtcccctcatgcactaagtaat 111242  T
Q  291 agttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggt 390  Q
    |||||||||| |||||||||||| ||||||||||||||                    ||||||  |||||||||||| ||||||||| ||||||||||     
T  111243 agttcagaaa-aggctgactaagactcacttcgcttaa--------------------gcgaccaacttacagtaggtatgggttcagttcgcttacggg 111321  T
Q  391 tcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 447  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  111322 tcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttcgctcac 111378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 302 - 431
Target Start/End: Complemental strand, 91876 - 91747
Alignment:
Q  302 aggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggt 401  Q
    ||||| |||||  |||| |||||||||||||||| ||| ||||||||||||||  |||||||||||||||||||||| |||||||||| |||||||||||    
T  91876 aggctaactaacactcagttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggt 91777  T
Q  402 tcgcttgagcgaacttctgacagaatcaaa 431  Q
    ||||||| ||||||||  ||||||||||||    
T  91776 tcgcttgggcgaactttggacagaatcaaa 91747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 302 - 431
Target Start/End: Complemental strand, 97602 - 97473
Alignment:
Q  302 aggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggt 401  Q
    ||||| |||||  |||| |||||||||||||||| ||| ||||||||||||||  |||||||||||||||||||||| |||||||||| |||||||||||    
T  97602 aggctaactaacactcagttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggt 97503  T
Q  402 tcgcttgagcgaacttctgacagaatcaaa 431  Q
    ||||||| ||||||||  ||||||||||||    
T  97502 tcgcttgggcgaactttggacagaatcaaa 97473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 141; Significance: 1e-73; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 1 - 450
Target Start/End: Original strand, 23527637 - 23528099
Alignment:
Q  1 tgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgagaattctaacaatccagaacatacacaattaattataattatg 99  Q
    |||||||||||||||||||| || || |||||| | ||||||||||||||||||| | || || || |||||||| |  ||||||||| |||||||||||    
T  23527637 tgtatatctacatacaactcgaccactacatatgtatcatatgacttactactcc-acaactcaaataatccaga-ctgacacaattatttataattatg 23527734  T
Q  100 cgcatacatcaatttcattcaata-gttatatat------------tcacttgattcctcactcaatcatctccaaaattcactaacattaacca-attc 185  Q
    | |||||||||||  ||||| | | |||||||||            ||||||| || | ||| ||| ||||||||| ||| |||||||  || || || |    
T  23527735 cacatacatcaatcacattccacatgttatatatatacatacatattcacttgctttcacacccaaacatctccaacatttactaacaccaatcatatcc 23527834  T
Q  186 gatcaccggcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcacgaa 285  Q
     | |||||| |||||||| |||||||  | |||||| || |||||||||| ||||||||   |  ||  |||| ||||||||||||||||| ||||| ||    
T  23527835 aaacaccggattgttctaataggatttggttacctacaccagggttatactagttaaagaggaagttaaagaacgctcaagaagtcccctcatgcactaa 23527934  T
Q  286 gcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggt-ctgggttcagctcgct 384  Q
    |||| |||||||||| ||||||| ||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||| |||||    
T  23527935 gcaacagttcagaaa-aggctgattaaggttcacttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggttctgggttcagttcgct 23528033  T
Q  385 tacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 450  Q
    ||||| |||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  23528034 tacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacagg 23528099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 315 - 448
Target Start/End: Complemental strand, 28890058 - 28889925
Alignment:
Q  315 ctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaa 414  Q
    |||| |||||||||||||||| ||  ||||||||||||||  |||||||||||||||||||||| |||||||||| |||||||||| ||||||| |||||    
T  28890058 ctcagttcgcttaagcgacggctatctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggctcgcttgggcgaa 28889959  T
Q  415 cttctgacagaatcaaaatggtttttcgctcaca 448  Q
    |||  ||||||| |||||||||||||||||||||    
T  28889958 ctttggacagaaacaaaatggtttttcgctcaca 28889925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 315 - 448
Target Start/End: Complemental strand, 28896762 - 28896629
Alignment:
Q  315 ctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaa 414  Q
    |||| |||||||||||||||| ||  ||||||||||||||  |||||||||||||||||||||| |||||||||| |||||||||| ||||||| |||||    
T  28896762 ctcagttcgcttaagcgacggctatctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggctcgcttgggcgaa 28896663  T
Q  415 cttctgacagaatcaaaatggtttttcgctcaca 448  Q
    |||  ||||||| |||||||||||||||||||||    
T  28896662 ctttggacagaaacaaaatggtttttcgctcaca 28896629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 315 - 448
Target Start/End: Complemental strand, 28910010 - 28909877
Alignment:
Q  315 ctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaa 414  Q
    |||| |||||||||||||||| ||  ||||||||||||||  |||||||||||||||||||||| |||||||||| |||||||||| ||||||| |||||    
T  28910010 ctcagttcgcttaagcgacggctatctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggctcgcttgggcgaa 28909911  T
Q  415 cttctgacagaatcaaaatggtttttcgctcaca 448  Q
    |||  ||||||| |||||||||||||||||||||    
T  28909910 ctttggacagaaacaaaatggtttttcgctcaca 28909877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 315 - 448
Target Start/End: Complemental strand, 28931702 - 28931569
Alignment:
Q  315 ctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaa 414  Q
    |||| |||||||||||||||| ||  ||||||||||||||  |||||||||||||||||||||| |||||||||| |||||||||| ||||||| |||||    
T  28931702 ctcagttcgcttaagcgacggctatctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggctcgcttgggcgaa 28931603  T
Q  415 cttctgacagaatcaaaatggtttttcgctcaca 448  Q
    |||  ||||||| |||||||||||||||||||||    
T  28931602 ctttggacagaaacaaaatggtttttcgctcaca 28931569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 315 - 448
Target Start/End: Complemental strand, 28946405 - 28946272
Alignment:
Q  315 ctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaa 414  Q
    |||| |||||||||||||||| ||  ||||||||||||||  |||||||||||||||||||||| |||||||||| |||||||||| ||||||| |||||    
T  28946405 ctcagttcgcttaagcgacggctatctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggctcgcttgggcgaa 28946306  T
Q  415 cttctgacagaatcaaaatggtttttcgctcaca 448  Q
    |||  ||||||| |||||||||||||||||||||    
T  28946305 ctttggacagaaacaaaatggtttttcgctcaca 28946272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 269 - 431
Target Start/End: Original strand, 19236250 - 19236410
Alignment:
Q  269 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggt 368  Q
    ||||||| ||| ||||||||| | |||||||| |||||  ||||  |||| |||||||||||||||| |||||||||||||||||| |||||||||||||    
T  19236250 gtcccctagtgtacgaagcaaga-ttcagaaa-aggctatctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggt 19236347  T
Q  369 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 431  Q
    |||||||||| ||||||| || |||||||||| |||||| |||||| |  || ||||||||||    
T  19236348 ctgggttcagttcgcttatgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 19236410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 269 - 431
Target Start/End: Original strand, 22460506 - 22460666
Alignment:
Q  269 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggt 368  Q
    ||||||| ||| ||||||||| | |||||||| |||||| ||||  |||| |||||||||||||||| |||||||||||||||||| |||||||||||||    
T  22460506 gtcccctagtgtacgaagcaaga-ttcagaaa-aggctgtctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggt 22460603  T
Q  369 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 431  Q
    |||||||||  ||||||| || || ||||||| |||||| |||||| |  || ||||||||||    
T  22460604 ctgggttcaattcgcttatgggtcactcacggctcgcttaagcgaattcttggcagaatcaaa 22460666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 269 - 431
Target Start/End: Original strand, 22467130 - 22467290
Alignment:
Q  269 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggt 368  Q
    ||||||| ||| ||||||||| | |||||||| |||||| ||||  |||| | |||||||||||||| |||||||||||| ||||| |||||||||||||    
T  22467130 gtcccctagtgtacgaagcaaga-ttcagaaa-aggctgtctaacactcagtacgcttaagcgacggctagttcgcttaaccgaccagcttacagtaggt 22467227  T
Q  369 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 431  Q
    |||||||||| ||||||| || |||||||||| |||||| |||||| |  || ||||||||||    
T  22467228 ctgggttcagttcgcttatgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 22467290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 269 - 415
Target Start/End: Original strand, 34829432 - 34829578
Alignment:
Q  269 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggt 368  Q
    ||||||| |||||||||||||| ||||||||| ||| ||||||||||||| ||||||||||||| || ||| |||||||||||||| ||| |||  ||||    
T  34829432 gtcccctagtgcacgaagcaaa-gttcagaaaaaggttgactaaggctcagttcgcttaagcgaagggtagctcgcttaagcgaccagctcacaaaaggt 34829530  T
Q  369 ctgggttc-agctcgcttacggttcgctcacggttcgcttgagcgaac 415  Q
      ||||||  |||| || ||||||||||| | ||||||||||||||||    
T  34829531 tggggttctcgctcactcacggttcgctcgcagttcgcttgagcgaac 34829578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 270 - 427
Target Start/End: Complemental strand, 18408647 - 18408491
Alignment:
Q  270 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcactt-cgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggt 368  Q
    |||||| |||||||| ||||| ||||| |||| |||||||||||| ||| || |||||||||||||| ||||| ||||||||||||||||||||| | ||    
T  18408647 tcccctagtgcacgaggcaaa-gttcaaaaagtggctgactaagg-tcattttcgcttaagcgacggctagtttgcttaagcgaccggcttacagaaagt 18408550  T
Q  369 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaat 427  Q
      |||||| ||||||| ||||||||||  ||  |||||| |||||||||||| ||||||    
T  18408549 tggggttccgctcgctaacggttcgcttgcgactcgcttaagcgaacttctggcagaat 18408491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 315 - 448
Target Start/End: Complemental strand, 28933205 - 28933070
Alignment:
Q  315 ctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtct-gggttcagctcgcttacggttcgctcacggttcgcttgagcga 413  Q
    |||| ||||||||||| |||| ||  |||||||| |||||  |||||||||||||| |||||||| |||||||||| |||||||||| ||||||  ||||    
T  28933205 ctcagttcgcttaagccacggctatctcgcttaaacgaccaacttacagtaggtctggggttcagttcgcttacgggtcgctcacggctcgctttggcga 28933106  T
Q  414 acttctgacagaatc-aaaatggtttttcgctcaca 448  Q
    ||||  ||||||| | ||||||||||||||||||||    
T  28933105 actttggacagaaacaaaaatggtttttcgctcaca 28933070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 22232493 - 22232436
Alignment:
Q  64 aacaatccagaacatacacaattaattataattatgcgcatacatcaatttcattcaa 121  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  22232493 aacaatccagaacatacacgattaattataattatgctcatacatcaatttcattcaa 22232436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 277 - 415
Target Start/End: Original strand, 20781102 - 20781240
Alignment:
Q  277 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttc 376  Q
    ||||||||||||||| |||||||| |||||||||||  || | |||||||||||||||| ||| |||||||||||||| ||| |||  ||||   ||| |    
T  20781102 gtgcacgaagcaaaa-ttcagaaaaaggctgactaacacttagttcgcttaagcgacgggtagctcgcttaagcgaccagctcacacaaggttgaggtcc 20781200  T
Q  377 -agctcgcttacggttcgctcacggttcgcttgagcgaac 415  Q
      ||||||| ||||||||||| | |||||||| |||||||    
T  20781201 tcgctcgctcacggttcgctcgcagttcgcttaagcgaac 20781240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 380 - 450
Target Start/End: Original strand, 20819618 - 20819689
Alignment:
Q  380 tcgcttacggttcgctcacg-gttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 450  Q
    ||||| |||||||||||||  ||||||||||||||| ||  |||||||||||||||||||||||||||||||    
T  20819618 tcgctcacggttcgctcacaagttcgcttgagcgaaatttggacagaatcaaaatggtttttcgctcacagg 20819689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 380 - 450
Target Start/End: Original strand, 20826718 - 20826789
Alignment:
Q  380 tcgcttacggttcgctcacg-gttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 450  Q
    ||||| |||||||||||||  ||||||||||||||| ||  |||||||||||||||||||||||||||||||    
T  20826718 tcgctcacggttcgctcacaagttcgcttgagcgaaatttggacagaatcaaaatggtttttcgctcacagg 20826789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 277 - 415
Target Start/End: Original strand, 20772327 - 20772465
Alignment:
Q  277 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttc 376  Q
    ||||||||||||||  ||||||||  ||||||||||  |||| |||||||||||||||| ||| |||||||||||||| ||| |||  ||||   ||| |    
T  20772327 gtgcacgaagcaaat-ttcagaaaagggctgactaacactcagttcgcttaagcgacgggtagctcgcttaagcgaccagctcacacaaggttgaggtcc 20772425  T
Q  377 -agctcgcttacggttcgctcacggttcgcttgagcgaac 415  Q
      ||||||| ||||||||||| | |||||||| |||||||    
T  20772426 tcgctcgctcacggttcgctcgcagttcgcttaagcgaac 20772465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 277 - 415
Target Start/End: Complemental strand, 24930627 - 24930489
Alignment:
Q  277 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttc 376  Q
    ||||||||||||||| ||||||||  ||||||||||  |||| |||||||||||||||  ||| |||||||||||||| ||| |||  ||||   ||| |    
T  24930627 gtgcacgaagcaaaa-ttcagaaaagggctgactaacactcagttcgcttaagcgacgagtagctcgcttaagcgaccagctcacacaaggttgaggtcc 24930529  T
Q  377 -agctcgcttacggttcgctcacggttcgcttgagcgaac 415  Q
      ||||||| ||||||||||| | |||||||| |||||||    
T  24930528 tcgctcgctcacggttcgctcgcagttcgcttaagcgaac 24930489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 22439370 - 22439321
Alignment:
Q  343 gcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttc 392  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| |||||    
T  22439370 gcttaagcgaccggcttacagtaagtctgggttctgctcgcttaaggttc 22439321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 136; Significance: 1e-70; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 166 - 450
Target Start/End: Original strand, 241 - 504
Alignment:
Q  166 tcactaacattaaccaattcgatcaccggcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaa 265  Q
    |||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||| | ||||||||||| || |||||||||||||||||||||    
T  241 tcactaacatcaaccaattcgatcaccagcgtgttctagtaggattctgatacctatacaaagtttatacaagttgaaagaaatattttagaatgctcaa 340  T
Q  266 gaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagta 365  Q
    || ||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||                    ||||| ||||||||| |    
T  341 gatgtccccttgtgcacgaagcaaaa-ttcagaaagaggctgactaaggttcacttcgcttaa--------------------gcgactggcttacagaa 419  T
Q  366 ggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 450  Q
     |||||||||| ||||||||| |||||| |  |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  420 agtctgggttctgctcgcttagggttcgtttgcggttcgcttaagcgaacttctgacagaatcaaaatggtttttcgctcacagg 504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 166 - 450
Target Start/End: Original strand, 7386 - 7649
Alignment:
Q  166 tcactaacattaaccaattcgatcaccggcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaa 265  Q
    |||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||| | ||||||||||| || |||||||||||||||||||||    
T  7386 tcactaacatcaaccaattcgatcaccagcgtgttctagtaggattctgatacctatacaaagtttatacaagttgaaagaaatattttagaatgctcaa 7485  T
Q  266 gaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagta 365  Q
    || ||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||                    ||||| ||||||||| |    
T  7486 gatgtccccttgtgcacgaagcaaaa-ttcagaaagaggctgactaaggttcacttcgcttaa--------------------gcgactggcttacagaa 7564  T
Q  366 ggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 450  Q
     |||||||||| ||||||||| |||||| |  |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  7565 agtctgggttctgctcgcttagggttcgtttgcggttcgcttaagcgaacttctgacagaatcaaaatggtttttcgctcacagg 7649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 129; Significance: 2e-66; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 303 - 447
Target Start/End: Complemental strand, 15121 - 14977
Alignment:
Q  303 ggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggtt 402  Q
    ||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15121 ggctgactaaggtccacttcgcttaagcgacggctagttcgcttaagcgaccggcttacagtaagtctgggttcagctcgcttacggttcgctcacggtt 15022  T
Q  403 cgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 447  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  15021 cgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 14977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 127; Significance: 2e-65; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 255 - 448
Target Start/End: Original strand, 41111214 - 41111407
Alignment:
Q  255 agaatgctcaagaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgacc 354  Q
    |||| ||||||||||||||||| ||||| |||||| |||||||||| ||||||| ||||| |||||||||||||||||||| ||||||||||||||||||    
T  41111214 agaacgctcaagaagtcccctcatgcactaagcaacagttcagaaa-aggctgattaaggttcacttcgcttaagcgacggctagttcgcttaagcgacc 41111312  T
Q  355 ggcttacagtaggt-ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcaca 448  Q
     ||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||    
T  41111313 agcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcaca 41111407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 269 - 431
Target Start/End: Original strand, 21705625 - 21705785
Alignment:
Q  269 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggt 368  Q
    ||||||| ||| ||||||||| | |||||||| |||||| ||||  |||| |||||||||||||||| |||||||||||||||||| |||||||||||||    
T  21705625 gtcccctagtgtacgaagcaaga-ttcagaaa-aggctgtctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggt 21705722  T
Q  369 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 431  Q
    |||||||||| |||||||||| |||||||||| |||||| |||||| |  || ||||||||||    
T  21705723 ctgggttcagttcgcttacgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 21705785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 269 - 431
Target Start/End: Original strand, 21710167 - 21710328
Alignment:
Q  269 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggt 368  Q
    ||||||| ||| ||||||||| | ||| |||| |||||| ||||  |||| |||||||||||||||| |||||||||||||||||| |||||||||||||    
T  21710167 gtcccctagtgtacgaagcaaga-ttcggaaaaaggctgtctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggt 21710265  T
Q  369 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 431  Q
    |||||||||| ||||||| ||||||||||||| |||||| |||||| |  || ||||||||||    
T  21710266 ctgggttcagttcgcttatggttcgctcacggctcgcttaagcgaattcttggcagaatcaaa 21710328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 269 - 431
Target Start/End: Complemental strand, 20851838 - 20851678
Alignment:
Q  269 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggt 368  Q
    ||||||| ||| ||||||||| | |||||||| |||||| ||||  |||| |||||||||||||||| |||||||||||||||||| |||||||||||||    
T  20851838 gtcccctagtgtacgaagcaaga-ttcagaaa-aggctgtctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggt 20851741  T
Q  369 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 431  Q
    |||||||||| ||||||| || |||||||||| |||||| |||||| |  || ||||||||||    
T  20851740 ctgggttcagttcgcttatgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 20851678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 293 - 431
Target Start/End: Complemental strand, 20858442 - 20858305
Alignment:
Q  293 ttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttc 392  Q
    |||||||| |||||| ||||  |||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||    
T  20858442 ttcagaaa-aggctgtctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggtctgggttcagttcgcttacgggtc 20858344  T
Q  393 gctcacggttcgcttgagcgaacttctgacagaatcaaa 431  Q
    |||||||| |||||| |||||| |  || ||||||||||    
T  20858343 gctcacggctcgcttaagcgaattcttggcagaatcaaa 20858305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 203 - 416
Target Start/End: Original strand, 19961472 - 19961684
Alignment:
Q  203 agtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaag 301  Q
    ||||||||| |||| ||||||||||||||||||||| |||| |||| |  | | ||| ||||| | | |||||| |||||||||||||| ||||||| ||    
T  19961472 agtaggatt-tgatgcctatacaagggttatacaagctaaaagaaacacgtaaaaatactcaaaagggtcccctagtgcacgaagcaaa-gttcagatag 19961569  T
Q  302 aggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttc-agctcgcttacggttcgctcacgg 400  Q
    |||||||||||||||||  |||||||||||| || ||| |||||||||||||| || ||||| | || ||| |||  ||||||| ||||||||||  |||    
T  19961570 aggctgactaaggctcatctcgcttaagcgaagggtagctcgcttaagcgaccagc-tacaggaagtttggattctcgctcgctcacggttcgcttgcgg 19961668  T
Q  401 ttcgcttgagcgaact 416  Q
    |||||| |||||||||    
T  19961669 ttcgctcgagcgaact 19961684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 270 - 395
Target Start/End: Original strand, 18712098 - 18712223
Alignment:
Q  270 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggt 368  Q
    |||||| |||||||| ||||||||||| || | |||||||||||| ||| ||||||||||||||||| |||||||||||||||||| |||||||| | ||    
T  18712098 tcccctagtgcacgaggcaaaagttcaaaaggtggctgactaagg-tcatcttcgcttaagcgacggctagttcgcttaagcgaccagcttacagaaagt 18712196  T
Q  369 ctgggttcagctcgcttacggttcgct 395  Q
      |||||| ||||||| ||||| ||||    
T  18712197 tggggttccgctcgctaacggtacgct 18712223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 20941714 - 20941657
Alignment:
Q  64 aacaatccagaacatacacaattaattataattatgcgcatacatcaatttcattcaa 121  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20941714 aacaatccagaacatacacaattaattataattatgctcatacatcaatttcattcaa 20941657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 41111002 - 41111112
Alignment:
Q  1 tgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgagaattctaacaatccagaacatacacaattaattataattatg 99  Q
    |||||||||||||||||||| || || |||||| | ||||||||||||||||||| | || || ||||||||||| | |||||||||| |||||||||||    
T  41111002 tgtatatctacatacaactcgaccactacatatgtatcatatgacttactactcc-acaactcaaacaatccaga-cttacacaattatttataattatg 41111099  T
Q  100 cgcatacatcaat 112  Q
    | |||||||||||    
T  41111100 cacatacatcaat 41111112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 220 - 425
Target Start/End: Complemental strand, 22030504 - 22030298
Alignment:
Q  220 tatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca 318  Q
    ||||||| ||||||||||||| || |||| ||| |||||||||||| | | |  ||| ||||| ||||||||| || | |||| ||||||||||| |       
T  22030504 tatacaaaggttatacaagttgaaagaaacattatagaatgctcaaaaggatttcctagtgcaagaagcaaaaattaa-aaagtggctgactaagacctt 22030406  T
Q  319 cttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgg-ttcgctcacggttcgcttgagcgaactt 417  Q
    |||||||||||||| || | | ||||||||||||| |||||||||   ||  | |||| ||||||| | || |||||||||||||||||  |||||||||    
T  22030405 cttcgcttaagcgaaggctggctcgcttaagcgactggcttacagagagttggtgttctgctcgctaagggtttcgctcacggttcgctcaagcgaactt 22030306  T
Q  418 ctgacaga 425  Q
    ||| ||||    
T  22030305 ctggcaga 22030298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 321 - 353
Target Start/End: Complemental strand, 20045414 - 20045382
Alignment:
Q  321 tcgcttaagcgacggttagttcgcttaagcgac 353  Q
    ||||||||||||||| |||||||||||||||||    
T  20045414 tcgcttaagcgacgggtagttcgcttaagcgac 20045382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 98; Significance: 5e-48; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 215 - 395
Target Start/End: Original strand, 30194 - 30374
Alignment:
Q  215 atacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaag 313  Q
    |||||||||||||||||||||||||| || |||| |||||||||||||||| | | |||||| ||||||||||||||| ||||||||| |||||||||||    
T  30194 atacctatacaagggttatacaagttgaaagaaacattttagaatgctcaaaagggtcccctagtgcacgaagcaaaa-ttcagaaagtggctgactaag 30292  T
Q  314 gctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgct 395  Q
    ||||||||||||||||||| |||| | ||||||||||||||||||||||| | || | ||||  ||||||| ||||||||||    
T  30293 gctcacttcgcttaagcgaaggttggctcgcttaagcgaccggcttacagaaagtttaggtttcgctcgctcacggttcgct 30374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 269 - 431
Target Start/End: Complemental strand, 4377 - 4217
Alignment:
Q  269 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggt 368  Q
    ||||||| ||||||||||||| | |||||||| ||||||||||| ||||| ||||||||||||| || |||||||||||||||||| |||||||||||||    
T  4377 gtcccctagtgcacgaagcaaga-ttcagaaa-aggctgactaacgctcagttcgcttaagcgatggctagttcgcttaagcgaccagcttacagtaggt 4280  T
Q  369 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 431  Q
    |||||||||| |||||||||| |||||||||| |||||| |||||| |  || ||||||||||    
T  4279 ctgggttcagttcgcttacgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 4217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 344 - 447
Target Start/End: Complemental strand, 1446 - 1343
Alignment:
Q  344 cttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgc 443  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||  |||||||||||||| |||||||||    
T  1446 cttaagcgaccagcttacagtaggtctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatcaaaattgtttttcgc 1347  T
Q  444 tcac 447  Q
    ||||    
T  1346 tcac 1343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 289 - 450
Target Start/End: Original strand, 10679 - 10829
Alignment:
Q  289 aaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacg 388  Q
    |||||||| |||| |||||||||||    |||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||| ||||||||       
T  10679 aaagttcaaaaagtggctgactaagatcaacttcgcttaagcgacggctagctcgcttaagcgaccggcttacagtaagtctgggttctgctcgctt--- 10775  T
Q  389 gttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 450  Q
            | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10776 --------agggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 10829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 79; Significance: 1e-36; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 277 - 431
Target Start/End: Complemental strand, 80189 - 80036
Alignment:
Q  277 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttc 376  Q
    |||||||||||||  ||||||||| |||||||||||  |||| |||||||||||||||| ||| ||||||||||||||  ||||||||||||||||||||    
T  80189 gtgcacgaagcaag-gttcagaaaaaggctgactaacactcagttcgcttaagcgacggctagctcgcttaagcgaccatcttacagtaggtctgggttc 80091  T
Q  377 agctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 431  Q
    || |||||||||| |||||||||| |||||| |||||| |  || ||||||||||    
T  80090 agttcgcttacgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 80036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 126 - 426
Target Start/End: Complemental strand, 82063 - 81764
Alignment:
Q  126 tatatattcacttgattcctcactcaatcatctccaaaattcactaacattaaccaattcgatcaccggcttgttctagtaggattctgatacctataca 225  Q
    |||||||||||||| || |  |||||| ||| |||||||||||||||  | |||||||||||  |||    ||||  |||||||||| | | | ||||||    
T  82063 tatatattcacttggtttcatactcaaacatatccaaaattcactaaattcaaccaattcgactaccaatgtgtttaagtaggattcag-tgcatataca 81965  T
Q  226 agggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgc 324  Q
    ||||||||||||||| || |||| |||||| ||||||||| | | | |||| ||| ||||||||||| |||| |||| ||||||||||| |  |||||||    
T  81964 agggttatacaagttgaaagaaacattttaaaatgctcaaaaggattccctggtgtacgaagcaaaa-ttcaaaaagtggctgactaagacctacttcgc 81866  T
Q  325 ttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacag 424  Q
    ||||||||||| | | ||||||||||||||| |||||||   ||   ||||  ||||||| || ||||||| ||||||||||| |||||||||||| |||    
T  81865 ttaagcgacggctggctcgcttaagcgaccgacttacagagagttgaggtttcgctcgctaacagttcgcttacggttcgcttaagcgaacttctggcag 81766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 270 - 453
Target Start/End: Original strand, 16121 - 16303
Alignment:
Q  270 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggt 368  Q
    |||||| |||||||| ||||| ||||| |||| |||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||| | ||    
T  16121 tcccctagtgcacgaggcaaa-gttcaaaaagtggctgactaagg-tcatcttcgcttaagcgacggttagctcgcttaagcgaccggcttacagaaagt 16218  T
Q  369 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacaggttc 453  Q
      |||||| ||||||| ||||||||||  ||||||| || ||||||||||||||| ||| ||| || ||||||||| || |||||    
T  16219 tggggttccgctcgctaacggttcgcttgcggttcggttaagcgaacttctgacataatgaaattgatttttcgcttacgggttc 16303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 76; Significance: 7e-35; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 64 - 214
Target Start/End: Complemental strand, 7667 - 7517
Alignment:
Q  64 aacaatccagaacatacacaattaattataattatgcgcatacatcaatttcattcaata-gttatatattcacttgattcctcactcaatcatctccaa 162  Q
    ||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||| |   ||||||||||||||||| |  ||||||||||||||||    
T  7667 aacaacccagaacatacccaattaattataattatgctcatacatcaatttcattcaacatactatatattcacttgatttcatactcaatcatctccaa 7568  T
Q  163 aattcactaacattaaccaattcgatcaccggcttgttctagtaggattctg 214  Q
    ||||||||||| | ||| ||||||||||||||  | || |||||||||||||    
T  7567 aattcactaac-tcaactaattcgatcaccggagtattttagtaggattctg 7517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 220 - 425
Target Start/End: Original strand, 1117 - 1322
Alignment:
Q  220 tatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca 318  Q
    ||||||| ||||||||||||| || |||| |||||| ||||||||| | | |||||| ||||||||||||||| |||| |||| ||||||||||| | |     
T  1117 tatacaaaggttatacaagttgaaagaaacattttaaaatgctcaaaaggatcccctagtgcacgaagcaaaa-ttcaaaaagtggctgactaagaccct 1215  T
Q  319 cttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttc 418  Q
    ||||||||||||||||| | | |||||||||||||||||| ||||   ||  || ||| ||||||| | || ||  ||||||||||||| ||||||||||    
T  1216 cttcgcttaagcgacggctggctcgcttaagcgaccggctcacagagagttgggtttccgctcgctaatggctcaatcacggttcgcttaagcgaacttc 1315  T
Q  419 tgacaga 425  Q
    |||||||    
T  1316 tgacaga 1322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 71; Significance: 6e-32; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 203 - 415
Target Start/End: Complemental strand, 493800 - 493588
Alignment:
Q  203 agtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaag 301  Q
    ||||||||| |||| |||||||||| |||||||||| |||| |||| |||| | ||| ||||| | | |||||| |||||||||||||  |||||||||     
T  493800 agtaggatt-tgatgcctatacaagagttatacaagctaaaagaaacatttaaaaatactcaaaagggtcccctagtgcacgaagcaag-gttcagaaaa 493703  T
Q  302 aggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttc-agctcgcttacggttcgctcacgg 400  Q
    ||||||||||||||||| ||||||||||||| || ||| |||||||||||||| ||  |||  ||||   |||||  ||||||| ||||||||||||| |    
T  493702 aggctgactaaggctcagttcgcttaagcgaagggtagctcgcttaagcgaccagcacacaaaaggttgaggttctcgctcgctcacggttcgctcacag 493603  T
Q  401 ttcgcttgagcgaac 415  Q
    |||||||||||||||    
T  493602 ttcgcttgagcgaac 493588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 174551 - 174440
Alignment:
Q  1 tgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgagaattctaacaatccagaacatacacaattaattataattatg 99  Q
    ||||| ||||||||||| || ||||  |||||| ||||| |||||||||| |||||  || || |||||||||||||||||||||||| |||||||||||    
T  174551 tgtatctctacatacaattcgactattacatatttttcaaatgacttactgctccgc-aactcaaacaatccagaacatacacaattatttataattatg 174453  T
Q  100 cgcatacatcaat 112  Q
    | |||||||||||    
T  174452 cacatacatcaat 174440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 363
Target Start/End: Original strand, 525062 - 525204
Alignment:
Q  220 tatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag--tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctc 317  Q
    ||||||| ||||||||||||| || |||| |||| |||||||||| || |  | |||| ||||| ||| |||||  ||| || | ||||||| |||||      
T  525062 tatacaaaggttatacaagttgaaagaaacatttcagaatgctca-gatggattccctagtgcaggaaacaaaa--tcaaaatgtggctgaccaaggcct 525158  T
Q  318 acttcgcttaagcgacggttagttcgcttaagcgaccggcttacag 363  Q
     |||||||||||||| || | ||||||||||||||||| |||||||    
T  525159 tcttcgcttaagcgaaggctggttcgcttaagcgaccgtcttacag 525204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 338 - 431
Target Start/End: Original strand, 134867 - 134960
Alignment:
Q  338 agttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 431  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||| |  |||||||||||||    
T  134867 agttcgcttaagcgaccagcttacagtaggtctgggttcagttcgcttacgggtcgctcacggttcgcttaagcgaattcttgacagaatcaaa 134960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 64; Significance: 1e-27; HSPs: 2)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 228 - 453
Target Start/End: Original strand, 663 - 888
Alignment:
Q  228 ggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgct 325  Q
    |||||||||| || || |||| |||||  ||||||||| | | ||||||  ||||||| ||||| ||||| |||| |||||||||||| ||| |||||||    
T  663 ggttatacaaattgaaagaaacattttttaatgctcaaaaggatcccctaatgcacgaggcaaa-gttcaaaaagtggctgactaagg-tcatcttcgct 760  T
Q  326 taagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacaga 425  Q
    |||||||||| | |||||||||||||||||||||||||   ||  |||||   |||||| ||| ||||||  |||||||||| |||||||||||||||||    
T  761 taagcgacggctggttcgcttaagcgaccggcttacagagagttggggtttccctcgctaacgtttcgcttgcggttcgcttaagcgaacttctgacaga 860  T
Q  426 atcaaaatggtttttcgctcacaggttc 453  Q
    ||  ||||| ||||||||| || |||||    
T  861 atggaaatgatttttcgcttacgggttc 888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 380 - 427
Target Start/End: Original strand, 875 - 923
Alignment:
Q  380 tcgcttacgg-ttcgctcacggttcgcttgagcgaacttctgacagaat 427  Q
    |||||||||| |||||||||||||||||||||||| | |||||||||||    
T  875 tcgcttacgggttcgctcacggttcgcttgagcgagcgtctgacagaat 923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 292 - 414
Target Start/End: Complemental strand, 3976 - 3854
Alignment:
Q  292 gttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggtt 391  Q
    ||||| |||| ||||||||||||   |||||||||||||||||  ||||||||||||||||||||||||||||  |||||||||| ||||  ||||||||    
T  3976 gttcaaaaagtggctgactaaggtcaacttcgcttaagcgacgtctagttcgcttaagcgaccggcttacagtgagtctgggttctgctcaattacggtt 3877  T
Q  392 cgctcacggttcgcttgagcgaa 414  Q
    ||||  |||||||||| ||||||    
T  3876 cgcttgcggttcgcttaagcgaa 3854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 220 - 425
Target Start/End: Complemental strand, 19166 - 18961
Alignment:
Q  220 tatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca 318  Q
    ||||||| ||||||| ||||| || |||| |||||| ||||||||| | | |||||| ||||||||||||||| |||| |||| ||||||||||| | |     
T  19166 tatacaaaggttatataagttgaaagaaacattttaaaatgctcaaaaggatcccctagtgcacgaagcaaaa-ttcaaaaagtggctgactaagaccct 19068  T
Q  319 cttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttc 418  Q
    ||||||||| | ||||| | | ||| ||||||||| |||| ||||   ||  |||||| ||||||| | || ||||||||||||||||| ||||||||||    
T  19067 cttcgcttaggagacggctggctcggttaagcgactggctcacagacagttggggttccgctcgctaatggctcgctcacggttcgcttaagcgaacttc 18968  T
Q  419 tgacaga 425  Q
    |||||||    
T  18967 tgacaga 18961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 251 - 415
Target Start/End: Original strand, 17497 - 17661
Alignment:
Q  251 ttttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaag 349  Q
    ||||||||||||||| | | || ||| ||||||||| ||||| ||||||||| ||||||| |||||||||||||||||||||| || | | |||||||||    
T  17497 ttttagaatgctcaaaaggctcgcctagtgcacgaaacaaaa-ttcagaaagtggctgaccaaggctcacttcgcttaagcgaaggctggctcgcttaag 17595  T
Q  350 cgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaac 415  Q
    |||||||||||||| | || ||||||  ||||||| || |||||||  ||| || |||||||||||    
T  17596 cgaccggcttacagaaagtttgggtttcgctcgctcacagttcgcttgcgggtctcttgagcgaac 17661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 61; Significance: 6e-26; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 126 - 393
Target Start/End: Original strand, 65311 - 65577
Alignment:
Q  126 tatatattcacttgattcctcactcaatcatctccaaaattcactaacattaaccaattcgatcaccggcttgttctagtaggattctgatacctataca 225  Q
    |||||||||||||| || |  |||||||||  |||||||||||||||  |||||||||||||| |||    |||| ||||||||||| | | | |||| |    
T  65311 tatatattcacttggtttcatactcaatcaaatccaaaattcactaaacttaaccaattcgattaccaatgtgttttagtaggattcag-tgcatatata 65409  T
Q  226 agggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgc 324  Q
    |  |||||||||||| || |||| |||||| |||| |||| | | |||||| |||||||| |||||| |||| |||| ||||||||||||    || |||    
T  65410 aaagttatacaagttgaaagaaacattttaaaatgttcaaaaggatcccctagtgcacgaggcaaaa-ttcaaaaagtggctgactaaggtcttctccgc 65508  T
Q  325 ttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcg 393  Q
    ||||| ||||| | |||||||||||||||||||||||||   ||  |||||| ||||||| ||||||||    
T  65509 ttaagtgacggctggttcgcttaagcgaccggcttacagagagttggggttccgctcgctaacggttcg 65577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 320 - 425
Target Start/End: Original strand, 1467 - 1572
Alignment:
Q  320 ttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttct 419  Q
    ||||||||||||| || | | |||||||||||||||||| ||||   ||  |||||| |||||||   || ||||||||||||||||| || ||||||||    
T  1467 ttcgcttaagcgaaggctggctcgcttaagcgaccggctgacagagagttggggttccgctcgctactggctcgctcacggttcgcttaagtgaacttct 1566  T
Q  420 gacaga 425  Q
    ||||||    
T  1567 gacaga 1572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 269 - 415
Target Start/End: Complemental strand, 11258 - 11112
Alignment:
Q  269 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggt 368  Q
    ||||||| |||||||||||||  ||||||||| ||||||||||||||||| ||||||||||||| || ||  |||||||||||||| ||| |||  ||||    
T  11258 gtcccctagtgcacgaagcaag-gttcagaaaaaggctgactaaggctcagttcgcttaagcgaagggtatctcgcttaagcgaccagctcacaaaaggt 11160  T
Q  369 ctgggttc-agctcgcttacggttcgctcacggttcgcttgagcgaac 415  Q
       |||||  ||||||| ||||||||||||| ||||||||||||||||    
T  11159 tgtggttctcgctcgctcacggttcgctcacagttcgcttgagcgaac 11112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 58; Significance: 4e-24; HSPs: 2)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 270 - 453
Target Start/End: Complemental strand, 752 - 581
Alignment:
Q  270 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggt 368  Q
    |||||| |||||||| ||||| ||||| |||| |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||| | ||    
T  752 tcccctagtgcacgacgcaaa-gttcaaaaagtggctgactaagg-tcatcttcgcttaagcgacggctagttcgcttaagcgaccggcttacagaaagt 655  T
Q  369 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacaggttc 453  Q
      |||||    ||||       ||||| ||||||||||||||||||||||||||||||| ||| || ||||||||| || |||||    
T  654 tggggtt----tcgc-------tcgctgacggttcgcttgagcgaacttctgacagaatgaaattgatttttcgcttacgggttc 581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 354
Target Start/End: Complemental strand, 7688 - 7605
Alignment:
Q  270 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggttagttcgcttaagcgacc 354  Q
    |||||| |||||||| ||||| ||||| |||| |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||    
T  7688 tcccctagtgcacgacgcaaa-gttcaaaaagtggctgactaagg-tcatcttcgcttaagcgacggctagttcgcttaagcgacc 7605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 271 - 395
Target Start/End: Original strand, 6861 - 6983
Alignment:
Q  271 cccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtc 369  Q
    ||||| |||||||| ||||| ||||| |||| |||||||| ||| ||| ||||||||||||||||| ||| ||||||||||||||||||||||||| |||    
T  6861 cccctagtgcacgaggcaaa-gttca-aaagtggctgactgagg-tcatcttcgcttaagcgacggctagctcgcttaagcgaccggcttacagtaagtc 6957  T
Q  370 tgggttcagctcgcttacggttcgct 395  Q
    ||||||| ||||||||||| ||||||    
T  6958 tgggttctgctcgcttacgattcgct 6983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 58; Significance: 4e-24; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 220 - 395
Target Start/End: Complemental strand, 129393 - 129217
Alignment:
Q  220 tatacaagggttatacaagttaaaggaaatattttagaa-tgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctc 317  Q
    ||||||| ||||||||||||| ||||||| |||| | || ||||||| | | |||||| ||||||||||||||| |||| |||| ||||||||||| |      
T  129393 tatacaaaggttatacaagttgaaggaaacatttcaaaaatgctcaaaaggatcccctagtgcacgaagcaaaa-ttcaaaaagtggctgactaagacct 129295  T
Q  318 acttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgct 395  Q
     ||||||||||||||||| | | |||||||||||||||||| |||| | ||  |||||| ||||||| ||||||||||    
T  129294 tcttcgcttaagcgacggctggctcgcttaagcgaccggctcacagaaagttggggttccgctcgctaacggttcgct 129217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 126 - 363
Target Start/End: Original strand, 116073 - 116308
Alignment:
Q  126 tatatattcacttgattcctcactcaatcatctccaaaattcactaacattaaccaattcgatcaccggcttgttctagtaggattctgatacctataca 225  Q
    ||||| ||||||||||| |  ||||||||||||| ||||||||||||  | ||| |||||||| |||    ||||  |||||||||| | |   |||| |    
T  116073 tatatgttcacttgatttcatactcaatcatctc-aaaattcactaaactcaactaattcgattaccaaggtgtttcagtaggattcag-tgtgtatata 116170  T
Q  226 agggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcg 323  Q
    | ||||||||| ||| || |||| |||||| ||| ||||| | | |||||| |||||||| ||||| ||||| |||  |||||||||||| ||| |||||    
T  116171 aaggttatacaggttgaaagaaacattttaaaatactcaaaaggatcccctagtgcacgaggcaaa-gttcaaaaaatggctgactaagg-tcatcttcg 116268  T
Q  324 cttaagcgacggttagttcgcttaagcgaccggcttacag 363  Q
    |||||||||||| | |||||||||||||||||||||||||    
T  116269 cttaagcgacggctggttcgcttaagcgaccggcttacag 116308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 391 - 453
Target Start/End: Original strand, 116325 - 116388
Alignment:
Q  391 tcgctcacggttcgcttgagcgaacttctgacagaat-caaaatggtttttcgctcacaggttc 453  Q
    ||||| |||||||||||||||||||||||||||||||  |||||| ||||||||| || |||||    
T  116325 tcgctaacggttcgcttgagcgaacttctgacagaatgaaaaatgatttttcgcttacgggttc 116388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 203 - 416
Target Start/End: Complemental strand, 11782 - 11569
Alignment:
Q  203 agtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaa-tgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaa 300  Q
    ||||||||| |||| ||||||||||||||||||||| |||| |||| | || | || | ||||| | | |||||| ||||| |||||||| ||||||| |    
T  11782 agtaggatt-tgatgcctatacaagggttatacaagctaaaagaaaaacttaaaaaatactcaaaagggtcccctagtgcatgaagcaaa-gttcagata 11685  T
Q  301 gaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttc-agctcgcttacggttcgctcacg 399  Q
    ||||||||||||||||||  |||||||||||| || |||||||||||||||||| || ||||| | || ||| |||  ||||||| |||| |||||  ||    
T  11684 gaggctgactaaggctcagctcgcttaagcgaagggtagttcgcttaagcgaccagc-tacaggaagtttggattctcgctcgctcacggatcgcttgcg 11586  T
Q  400 gttcgcttgagcgaact 416  Q
    ||||||| |||||||||    
T  11585 gttcgctcgagcgaact 11569  T

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Target: scaffold0031 (Bit Score: 56; Significance: 6e-23; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 220 - 425
Target Start/End: Original strand, 121200 - 121406
Alignment:
Q  220 tatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca 318  Q
    ||||||| ||||||||||||| || |||| |||||| ||||||||| | | | |||| |||||||||||||||| ||| |||| ||||||||||| |       
T  121200 tatacaaaggttatacaagttgaaagaaacattttaaaatgctcaaaaggattccctagtgcacgaagcaaaag-tcaaaaagtggctgactaagacctt 121298  T
Q  319 cttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgctta-cggttcgctcacggttcgcttgagcgaactt 417  Q
    |||||||||||||| || | | |||||||||| ||||||||||||   ||  | |||| ||||||| |  |||||||||||||||||||  |||||||||    
T  121299 cttcgcttaagcgaaggctggctcgcttaagcaaccggcttacagagagttggtgttctgctcgctaaggggttcgctcacggttcgctcaagcgaactt 121398  T
Q  418 ctgacaga 425  Q
    ||| ||||    
T  121399 ctggcaga 121406  T

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Target: scaffold0031; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 220 - 425
Target Start/End: Original strand, 132077 - 132283
Alignment:
Q  220 tatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca 318  Q
    ||||||| ||||||||||||| || |||| |||||| ||||||||| | | | |||| |||||||||||||||| ||| |||| ||||||||||| |       
T  132077 tatacaaaggttatacaagttgaaagaaacattttaaaatgctcaaaaggattccctagtgcacgaagcaaaag-tcaaaaagtggctgactaagacctt 132175  T
Q  319 cttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgctta-cggttcgctcacggttcgcttgagcgaactt 417  Q
    |||||||||||||| || | | |||||||||| ||||||||||||   ||  | |||| ||||||| |  |||||||||||||||||||  |||||||||    
T  132176 cttcgcttaagcgaaggctggctcgcttaagcaaccggcttacagagagttggtgttctgctcgctaaggggttcgctcacggttcgctcaagcgaactt 132275  T
Q  418 ctgacaga 425  Q
    ||| ||||    
T  132276 ctggcaga 132283  T

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Target: scaffold0261 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 203 - 415
Target Start/End: Complemental strand, 24342 - 24131
Alignment:
Q  203 agtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaag 301  Q
    ||||||||| |||| |||| |||||||||||||||| |||| |||| | || | ||  ||||| | | |||||| |||||||||||||| ||||||||||    
T  24342 agtaggatt-tgatgcctacacaagggttatacaagctaaaagaaacacttaaaaacactcaaaagggtcccctagtgcacgaagcaaa-gttcagaaag 24245  T
Q  302 aggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttc-agctcgcttacggttcgctcacgg 400  Q
    || ||||||||||||||  |||||||||||| || ||| |||||||||||||| ||| |||  |||| ||| |||  ||| ||| || |||||||| | |    
T  24244 agactgactaaggctcatctcgcttaagcgaaggatagctcgcttaagcgaccagctcacaaaaggt-tggattctcgcttgctcacagttcgctcgcag 24146  T
Q  401 ttcgcttgagcgaac 415  Q
    |||||||||||||||    
T  24145 ttcgcttgagcgaac 24131  T

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Target: scaffold0261; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 415
Target Start/End: Complemental strand, 24106 - 24070
Alignment:
Q  379 ctcgcttacggttcgctcacggttcgcttgagcgaac 415  Q
    ||||||||||||||||||||||||||||| |||||||    
T  24106 ctcgcttacggttcgctcacggttcgcttaagcgaac 24070  T

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Target: scaffold0077 (Bit Score: 51; Significance: 6e-20; HSPs: 3)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 305 - 395
Target Start/End: Complemental strand, 4281 - 4191
Alignment:
Q  305 ctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgct 395  Q
    ||||||||||   |||||||||||||||||  |||||||||||||||| | |||||||||| |||||||||| ||||| ||||||||||||    
T  4281 ctgactaaggtcaacttcgcttaagcgacgtctagttcgcttaagcgatcagcttacagtaagtctgggttctgctcgattacggttcgct 4191  T

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Target: scaffold0077; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 18024 - 17972
Alignment:
Q  64 aacaatccagaacatacacaattaattataattatgcgcatacatcaatttca 116  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18024 aacaatccagaacatacacaattaattataattatgctcatacatcaatttca 17972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 23657 - 23605
Alignment:
Q  64 aacaatccagaacatacacaattaattataattatgcgcatacatcaatttca 116  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23657 aacaatccagaacatacacaattaattataattatgctcatacatcaatttca 23605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 1584 - 1527
Alignment:
Q  64 aacaatccagaacatacacaattaattataattatgcgcatacatcaatttcattcaa 121  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  1584 aacaatccagaacatacacaattaattaaaattatgctcatacatcaatttcattcaa 1527  T

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Target: scaffold0124 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 289 - 395
Target Start/End: Complemental strand, 35014 - 34908
Alignment:
Q  289 aaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttac 387  Q
    |||||||| |||| |||||||||||| ||| |||||||||||||| || ||||||||||||||||||||||||||| | ||   ||||| ||||||| ||    
T  35014 aaagttcaaaaagtggctgactaagg-tcatcttcgcttaagcgatggctagttcgcttaagcgaccggcttacagaaagttgaggttccgctcgctgac 34916  T
Q  388 ggttcgct 395  Q
    ||||||||    
T  34915 ggttcgct 34908  T

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Target: scaffold0124; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 453
Target Start/End: Complemental strand, 34917 - 34861
Alignment:
Q  397 acggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacaggttc 453  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||||| || |||||    
T  34917 acggttcgcttgagcgaacttctgacagaatgaaattgatttttcgcttacgggttc 34861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 228 - 454
Target Start/End: Complemental strand, 15735 - 15521
Alignment:
Q  228 ggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgct 325  Q
    ||||||||||||| || |||| |||||  ||||||||| | | || ||| |||||||| ||||| ||||| |||| |||||||||||| ||| |||||||    
T  15735 ggttatacaagttgaaagaaacatttttaaatgctcaaaaggatctcctagtgcacgaggcaaa-gttca-aaagtggctgactaagg-tcatcttcgct 15639  T
Q  326 taagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacaga 425  Q
    |||||||||||| ||||||||||||||||| |||| ||   || ||||||    ||       ||||||| ||||||||||||||||||||||||||| |    
T  15638 taagcgacggttggttcgcttaagcgaccgtcttatagagagtttgggtt----tc-------gttcgctaacggttcgcttgagcgaacttctgacata 15550  T
Q  426 atcaaaatggtttttcgctcacaggttct 454  Q
    ||  ||||| ||||||||| || ||||||    
T  15549 atggaaatgatttttcgcttacgggttct 15521  T

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Target: scaffold0094 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 228 - 425
Target Start/End: Original strand, 51552 - 51749
Alignment:
Q  228 ggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgctt 326  Q
    ||||||||||||| || |||| |||||| ||||||||| | | | |||| |||||| |||||||| |||| |||| ||||||||||| |   ||||||||    
T  51552 ggttatacaagttgaaagaaacattttaaaatgctcaaaaggattccctagtgcacaaagcaaaa-ttcaaaaagtggctgactaagaccttcttcgctt 51650  T
Q  327 aagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacaga 425  Q
    ||||||||| | | ||||||||| |||| ||| | ||   ||   ||||  ||||||| |||||||||  ||||||||||| |||||||||||| ||||    
T  51651 aagcgacggctggctcgcttaagtgaccagctcatagagagttgaggtttcgctcgctaacggttcgcatacggttcgcttaagcgaacttctggcaga 51749  T

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Target: scaffold0034 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 269 - 387
Target Start/End: Original strand, 72631 - 72748
Alignment:
Q  269 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggt 368  Q
    |||||||  |||||||||||||| ||||||||| |||||||| |||||||  |||||||||||| || ||| |||||||||||||| ||| |||  ||||    
T  72631 gtcccctaatgcacgaagcaaaaattcagaaagtggctgact-aggctcagctcgcttaagcgaagggtagctcgcttaagcgaccagctcacaaaaggt 72729  T
Q  369 ctgggttcagctcgcttac 387  Q
      |||||  ||||||||||    
T  72730 tggggttttgctcgcttac 72748  T

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Target: scaffold0720 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 269 - 354
Target Start/End: Complemental strand, 3966 - 3882
Alignment:
Q  269 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgacc 354  Q
    ||||||| |||||||||||||  ||||| ||| ||||||||||| ||||| ||||||||||||| || ||| ||||||||||||||    
T  3966 gtcccctagtgcacgaagcaag-gttcaaaaaaaggctgactaatgctcagttcgcttaagcgaagggtagctcgcttaagcgacc 3882  T

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Target: scaffold0206 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 354
Target Start/End: Original strand, 18045 - 18121
Alignment:
Q  277 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggttagttcgcttaagcgacc 354  Q
    |||||||||||||  ||||||||| ||||||||||||||||| |||||||||||||  | ||| ||||||||||||||    
T  18045 gtgcacgaagcaag-gttcagaaaaaggctgactaaggctcagttcgcttaagcgaaaggtagctcgcttaagcgacc 18121  T

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Target: scaffold0235 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 3)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 395
Target Start/End: Complemental strand, 23332 - 23226
Alignment:
Q  289 aaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttac 387  Q
    |||||||| |||| |||||||||||| ||| ||||||||||||||||| ||| ||||||| || ||||||| |||| | ||  ||||||| |||||| ||    
T  23332 aaagttcaaaaagtggctgactaagg-tcatcttcgcttaagcgacggctagctcgcttaggcaaccggctcacagaaagttggggttcaactcgctgac 23234  T
Q  388 ggttcgct 395  Q
    ||||||||    
T  23233 ggttcgct 23226  T

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Target: scaffold0235; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 391 - 440
Target Start/End: Complemental strand, 15524 - 15475
Alignment:
Q  391 tcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggttttt 440  Q
    ||||| |||||||||||||||||||||||| |||||| ||||||||||||    
T  15524 tcgctgacggttcgcttgagcgaacttctggcagaatgaaaatggttttt 15475  T

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Target: scaffold0235; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 395
Target Start/End: Complemental strand, 15633 - 15509
Alignment:
Q  270 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggt 368  Q
    |||||| |||||||| |||||  |||| |||| |||||||||||| ||| |||||||||||||| || ||| || |||||||||| |||| |||| | ||    
T  15633 tcccctagtgcacgaggcaaat-ttcaaaaagtggctgactaagg-tcatcttcgcttaagcgatggctagctcacttaagcgactggctcacagaaagt 15536  T
Q  369 ctgggttcagctcgcttacggttcgct 395  Q
      |||||| ||||||| ||||||||||    
T  15535 tggggttccgctcgctgacggttcgct 15509  T

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Target: scaffold0107 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 395
Target Start/End: Complemental strand, 41283 - 41160
Alignment:
Q  270 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggt 368  Q
    |||||| |||||||| ||||| ||||| |||| | |||||||||| ||| ||||||||||||||||  |||||||||||||||| ||||| |||| ||||    
T  41283 tcccctagtgcacgaggcaaa-gttca-aaagtgtctgactaagg-tcatcttcgcttaagcgacgtctagttcgcttaagcgatcggctcacagaaggt 41187  T
Q  369 ctgggttcagctcgcttacggttcgct 395  Q
      |||||| ||||||| || |||||||    
T  41186 tggggttccgctcgctgacagttcgct 41160  T

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Target: scaffold0020 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 395
Target Start/End: Complemental strand, 102623 - 102499
Alignment:
Q  270 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggttagttcgcttaagcgaccggcttacagtaggt 368  Q
    |||||| |||||||| ||||  ||||| |||| ||| |||||||| ||| |||||||||||||| || | ||||||||||||||||| ||||||| | ||    
T  102623 tcccctagtgcacgaggcaag-gttcaaaaagtggccgactaagg-tcatcttcgcttaagcgatggctggttcgcttaagcgaccgacttacagaaagt 102526  T
Q  369 ctgggttcagctcgcttacggttcgct 395  Q
      |||||| ||||||| ||||||||||    
T  102525 tggggttccgctcgctgacggttcgct 102499  T

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Target: scaffold0006 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 447
Target Start/End: Original strand, 49595 - 49645
Alignment:
Q  397 acggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 447  Q
    |||||||| ||||||||||||  ||||||||||||||||||||||||||||    
T  49595 acggttcgattgagcgaactttggacagaatcaaaatggtttttcgctcac 49645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 354
Target Start/End: Original strand, 14 - 152
Alignment:
Q  216 tacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaagg 314  Q
    |||||||||||| |||||||||| |||| |||| | || | ||| || || | | || ||| |||||||| ||||| |||||||||||||||  ||||||    
T  14 tacctatacaagagttatacaagctaaaagaaacaattaaaaatacttaaaagggtctcctagtgcacgaggcaaa-gttcagaaagaggctagctaagg 112  T
Q  315 ctcacttcgcttaagcgacggttagttcgcttaagcgacc 354  Q
    ||||  |||| ||||||| || ||| ||||||||||||||    
T  113 ctcagctcgcataagcgaagggtagctcgcttaagcgacc 152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1061 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold1061
Description:

Target: scaffold1061; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 232 - 335
Target Start/End: Original strand, 1712 - 1815
Alignment:
Q  232 atacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaag 329  Q
    ||||||||| || |||| |||||| ||||||||| | | |||||| |||||||| |||||| |||| |||| |||||||||||| ||| |||||||||||    
T  1712 atacaagttgaaagaaacattttaaaatgctcaaaaggatcccctagtgcacgaggcaaaa-ttcaaaaagtggctgactaagg-tcatcttcgcttaag 1809  T
Q  330 cgacgg 335  Q
    ||||||    
T  1810 cgacgg 1815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 152548 - 152601
Alignment:
Q  1 tgtatatctacatacaactcaactacacatatat-ttcatatgacttactactc 53  Q
    ||||||||||||||||||||||| | |||||||| | |||||||||||| ||||    
T  152548 tgtatatctacatacaactcaaccatacatatatgtacatatgacttacaactc 152601  T

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Target: scaffold0535 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 6020 - 5972
Alignment:
Q  1 tgtatatctacatacaactcaactacacatatat-ttcatatgacttac 48  Q
    ||||||||||||||||||||||| | |||||||| | ||||||||||||    
T  6020 tgtatatctacatacaactcaaccatacatatatgtacatatgacttac 5972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 264
Target Start/End: Original strand, 6299 - 6343
Alignment:
Q  220 tatacaagggttatacaagttaaaggaaatattttagaatgctca 264  Q
    ||||||| ||||||||||||| || |||| |||||||||||||||    
T  6299 tatacaaaggttatacaagttgaaagaaacattttagaatgctca 6343  T

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