View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0060-INSERTION-7 (Length: 621)

Name: NF0060-INSERTION-7
Description: NF0060
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0060-INSERTION-7
NF0060-INSERTION-7
[»] chr4 (12 HSPs)
chr4 (348-535)||(47023536-47023712)
chr4 (460-519)||(20717944-20718003)
chr4 (460-509)||(30797705-30797754)
chr4 (449-519)||(12805768-12805838)
chr4 (455-519)||(22219945-22220009)
chr4 (460-519)||(12840698-12840757)
chr4 (447-514)||(13553462-13553529)
chr4 (449-516)||(27303947-27304014)
chr4 (462-516)||(10450301-10450355)
chr4 (479-519)||(15623942-15623982)
chr4 (449-494)||(24580003-24580048)
chr4 (461-510)||(51885889-51885938)
[»] chr1 (16 HSPs)
chr1 (252-343)||(1831353-1831444)
chr1 (450-520)||(23224619-23224689)
chr1 (450-519)||(50048241-50048310)
chr1 (1-49)||(1842456-1842504)
chr1 (449-519)||(34522114-34522184)
chr1 (455-517)||(17836791-17836853)
chr1 (461-519)||(27682935-27682993)
chr1 (253-292)||(17492634-17492673)
chr1 (455-517)||(30676667-30676729)
chr1 (257-293)||(9450333-9450369)
chr1 (258-292)||(5759966-5760000)
chr1 (460-510)||(11768892-11768942)
chr1 (450-519)||(9329239-9329308)
chr1 (464-509)||(23420485-23420530)
chr1 (252-292)||(1831193-1831233)
chr1 (455-519)||(9354206-9354270)
[»] chr6 (13 HSPs)
chr6 (455-519)||(15576189-15576253)
chr6 (467-519)||(13194289-13194341)
chr6 (464-519)||(13782414-13782469)
chr6 (464-519)||(13789736-13789791)
chr6 (464-519)||(13803991-13804046)
chr6 (460-519)||(17858937-17858996)
chr6 (449-519)||(6091920-6091990)
chr6 (449-507)||(15387156-15387213)
chr6 (463-519)||(6177908-6177964)
chr6 (449-508)||(15320078-15320136)
chr6 (460-519)||(22727243-22727302)
chr6 (462-508)||(8037051-8037097)
chr6 (464-521)||(17320789-17320845)
[»] chr7 (23 HSPs)
chr7 (461-519)||(18494555-18494613)
chr7 (450-519)||(7494486-7494555)
chr7 (462-519)||(21544680-21544737)
chr7 (452-519)||(7143571-7143638)
chr7 (450-519)||(9121026-9121095)
chr7 (450-519)||(24469089-24469157)
chr7 (450-519)||(24474037-24474105)
chr7 (463-519)||(4091346-4091402)
chr7 (447-514)||(9687085-9687152)
chr7 (460-519)||(14074488-14074547)
chr7 (460-519)||(14384516-14384575)
chr7 (464-509)||(2352143-2352188)
chr7 (460-509)||(7152124-7152173)
chr7 (460-519)||(3401079-3401138)
chr7 (463-514)||(9071400-9071451)
chr7 (448-519)||(21473018-21473089)
chr7 (464-511)||(22271056-22271103)
chr7 (257-291)||(33342948-33342982)
chr7 (450-519)||(7776351-7776420)
chr7 (475-519)||(7325825-7325868)
chr7 (474-522)||(20039732-20039780)
chr7 (474-522)||(20049896-20049944)
chr7 (455-515)||(20342217-20342277)
[»] scaffold0171 (2 HSPs)
scaffold0171 (450-519)||(7352-7421)
scaffold0171 (461-511)||(22574-22624)
[»] chr2 (7 HSPs)
chr2 (450-519)||(31000599-31000668)
chr2 (461-518)||(28455128-28455185)
chr2 (450-519)||(41256208-41256278)
chr2 (253-292)||(42866663-42866702)
chr2 (257-291)||(26632433-26632467)
chr2 (478-519)||(27591686-27591726)
chr2 (460-519)||(9516531-9516591)
[»] chr5 (15 HSPs)
chr5 (455-519)||(11273684-11273748)
chr5 (461-519)||(17768654-17768712)
chr5 (449-521)||(18451059-18451131)
chr5 (455-519)||(20715835-20715899)
chr5 (464-519)||(24518959-24519014)
chr5 (455-519)||(19571048-19571112)
chr5 (460-519)||(16617447-16617506)
chr5 (455-515)||(25682147-25682207)
chr5 (461-516)||(17029270-17029325)
chr5 (257-292)||(23223856-23223891)
chr5 (253-292)||(34397224-34397263)
chr5 (252-290)||(23294352-23294390)
chr5 (255-292)||(13401275-13401312)
chr5 (191-232)||(23294345-23294386)
chr5 (461-517)||(24842959-24843015)
[»] chr8 (10 HSPs)
chr8 (455-519)||(32240446-32240510)
chr8 (475-519)||(13803097-13803141)
chr8 (460-519)||(12957561-12957620)
chr8 (478-519)||(1644401-1644442)
chr8 (450-519)||(26853603-26853672)
chr8 (455-518)||(13305658-13305721)
chr8 (464-510)||(28075675-28075721)
chr8 (469-518)||(28900132-28900181)
chr8 (463-515)||(6359202-6359254)
chr8 (475-519)||(28259376-28259419)
[»] chr3 (9 HSPs)
chr3 (455-516)||(33913400-33913461)
chr3 (475-519)||(14419354-14419398)
chr3 (464-519)||(14541073-14541128)
chr3 (460-519)||(25918086-25918145)
chr3 (449-523)||(2728443-2728517)
chr3 (258-292)||(25258198-25258232)
chr3 (449-514)||(10342999-10343064)
chr3 (464-509)||(26419997-26420042)
chr3 (258-291)||(45012857-45012890)
[»] scaffold0103 (1 HSPs)
scaffold0103 (461-517)||(36494-36550)
[»] scaffold0386 (2 HSPs)
scaffold0386 (468-521)||(10551-10604)
scaffold0386 (460-514)||(7536-7590)
[»] scaffold0362 (1 HSPs)
scaffold0362 (460-517)||(9964-10021)
[»] scaffold0855 (1 HSPs)
scaffold0855 (455-513)||(2021-2079)
[»] scaffold0847 (1 HSPs)
scaffold0847 (455-513)||(2186-2244)
[»] scaffold0108 (1 HSPs)
scaffold0108 (465-509)||(9909-9953)
[»] scaffold0036 (1 HSPs)
scaffold0036 (460-488)||(27366-27394)


Alignment Details
Target: chr4 (Bit Score: 92; Significance: 2e-44; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 348 - 535
Target Start/End: Complemental strand, 47023712 - 47023536
Alignment:
Q  348 aatttaaccctgccaattctatttcaattctagttttatttttcacctctttgaaataagttttattgatttaattaccaagttgaaccgagcacaatct 447  Q
    |||| |||||||| ||||||||| ||||||||||||   ||||||| |||||||||||||||||||||||| |||||| |||||||||     |||||||    
T  47023712 aattcaaccctgc-aattctatt-caattctagttta--ttttcac-tctttgaaataagttttattgatt-aattactaagttgaacg----acaatct 47023623  T
Q  448 tttgtgaagaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatcacttagtgcgcacaatt 535  Q
     | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  47023622 ct-gtgaagaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgttcatcacttagtgcgtacaatt 47023536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 460 - 519
Target Start/End: Original strand, 20717944 - 20718003
Alignment:
Q  460 gataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    |||||||||||||| |||||||||||||||||||| || |||||||||||||||| ||||    
T  20717944 gataaacttactactttattacttgttacgatttggtgcacttgccaatttcgtctatca 20718003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 460 - 509
Target Start/End: Original strand, 30797705 - 30797754
Alignment:
Q  460 gataaacttactaccttattacttgttacgatttgatgtacttgccaatt 509  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  30797705 gataaacttactactttattacttgttacgatttgatgcacttgccaatt 30797754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 449 - 519
Target Start/End: Complemental strand, 12805838 - 12805768
Alignment:
Q  449 ttgtgaagaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    ||||| |||| |||||||||||||| |||||||||||||||||||| || | || |||||||||| |||||    
T  12805838 ttgtggagaatgataaacttactactttattacttgttacgatttggtgcatttaccaatttcgttcatca 12805768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 455 - 519
Target Start/End: Original strand, 22219945 - 22220009
Alignment:
Q  455 agaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    |||| |||||||||||||| ||||||||||||| |||||  || ||||| |||||||||||||||    
T  22219945 agaacgataaacttactactttattacttgttatgatttagtgcacttgtcaatttcgtccatca 22220009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 460 - 519
Target Start/End: Complemental strand, 12840757 - 12840698
Alignment:
Q  460 gataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    |||||||||||||| ||| ||||||||||||||   || |||||||||||||||||||||    
T  12840757 gataaacttactactttaatacttgttacgattcagtgcacttgccaatttcgtccatca 12840698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 447 - 514
Target Start/End: Complemental strand, 13553529 - 13553462
Alignment:
Q  447 ttttgtgaagaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtc 514  Q
    |||||||  ||| |||||||||||||| ||||||||| ||||||||||||  ||||| ||||||||||    
T  13553529 ttttgtgtggaacgataaacttactactttattacttattacgatttgatacacttgtcaatttcgtc 13553462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 449 - 516
Target Start/End: Original strand, 27303947 - 27304014
Alignment:
Q  449 ttgtgaagaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtcca 516  Q
    ||||||| || |||||||||||||| ||||||||| |||||||||| |  |||| |||||||||||||    
T  27303947 ttgtgaaaaacgataaacttactactttattacttattacgatttggtacacttaccaatttcgtcca 27304014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 462 - 516
Target Start/End: Complemental strand, 10450355 - 10450301
Alignment:
Q  462 taaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtcca 516  Q
    |||||||||||| |||||| ||||||||||||| || ||||||||||||| ||||    
T  10450355 taaacttactactttattatttgttacgatttggtgcacttgccaatttcatcca 10450301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 479 - 519
Target Start/End: Original strand, 15623942 - 15623982
Alignment:
Q  479 tacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    |||||||| ||||||| ||||||||||||||||||||||||    
T  15623942 tacttgtttcgatttggtgtacttgccaatttcgtccatca 15623982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 494
Target Start/End: Original strand, 24580003 - 24580048
Alignment:
Q  449 ttgtgaagaaagataaacttactaccttattacttgttacgatttg 494  Q
    ||||| |||| |||||||| ||||| ||||||||||||||||||||    
T  24580003 ttgtggagaacgataaactaactactttattacttgttacgatttg 24580048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 461 - 510
Target Start/End: Original strand, 51885889 - 51885938
Alignment:
Q  461 ataaacttactaccttattacttgttacgatttgatgtacttgccaattt 510  Q
    ||||||||||||| |||||||||| ||||||| | || ||||||||||||    
T  51885889 ataaacttactactttattacttgatacgattcggtgcacttgccaattt 51885938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 1e-27; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 252 - 343
Target Start/End: Original strand, 1831353 - 1831444
Alignment:
Q  252 gtagtgaatgagcaatttcataagtgagaagagtaattttccaaaataaatagggcatggttacttgcttaccaagggtagtaggtaatact 343  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||| ||| |||||||||||||  |||||||||||||    
T  1831353 gtagtgaatgggcaatttcataggtgagaagagtaattttccaaaataaataggtcatgcttaattgcttaccaaggacagtaggtaatact 1831444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 450 - 520
Target Start/End: Original strand, 23224619 - 23224689
Alignment:
Q  450 tgtgaagaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatcac 520  Q
    |||| |||| |||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||    
T  23224619 tgtggagaatgataaacttactaccttattacttgttacgatttgacgcacttgccaatttcgcccatcac 23224689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 450 - 519
Target Start/End: Original strand, 50048241 - 50048310
Alignment:
Q  450 tgtgaagaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    |||| |||| |||||||||||||| |||||||||||||  |||||||| |||||||||||||||||||||    
T  50048241 tgtggagaacgataaacttactactttattacttgttataatttgatgcacttgccaatttcgtccatca 50048310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 1842504 - 1842456
Alignment:
Q  1 agaatgtcccaaccaaaagaagaataagtgttgctcctactcctgcatt 49  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1842504 agaatgtcccaaccaaaagaagaataagcgttgctcctactcctgcatt 1842456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 449 - 519
Target Start/End: Original strand, 34522114 - 34522184
Alignment:
Q  449 ttgtgaagaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    ||||| |||| |||||||||||||  |||||||||||||||||||| || ||||||||||||| |||||||    
T  34522114 ttgtggagaacgataaacttactattttattacttgttacgatttggtgcacttgccaatttcttccatca 34522184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 455 - 517
Target Start/End: Complemental strand, 17836853 - 17836791
Alignment:
Q  455 agaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccat 517  Q
    |||| |||||||||||||| || |||||||||| |||||| || |||||||||||||||||||    
T  17836853 agaacgataaacttactactttcttacttgttatgatttggtgcacttgccaatttcgtccat 17836791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 461 - 519
Target Start/End: Original strand, 27682935 - 27682993
Alignment:
Q  461 ataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    ||||||||||||| ||||||||||||||| |||| || ||||| |||||||||||||||    
T  27682935 ataaacttactactttattacttgttacggtttggtgcacttgtcaatttcgtccatca 27682993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 253 - 292
Target Start/End: Complemental strand, 17492673 - 17492634
Alignment:
Q  253 tagtgaatgagcaatttcataagtgagaagagtaattttc 292  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  17492673 tagtgaatgagaaatttcataagtgagaagagtaattttc 17492634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 455 - 517
Target Start/End: Original strand, 30676667 - 30676729
Alignment:
Q  455 agaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccat 517  Q
    |||| |||||| ||||||| |||||||||||||||||||| || ||||| ||| |||||||||    
T  30676667 agaacgataaatttactactttattacttgttacgatttggtgaacttgtcaagttcgtccat 30676729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 257 - 293
Target Start/End: Original strand, 9450333 - 9450369
Alignment:
Q  257 gaatgagcaatttcataagtgagaagagtaattttcc 293  Q
    |||||||||||||||||||||||||||| ||||||||    
T  9450333 gaatgagcaatttcataagtgagaagagcaattttcc 9450369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 258 - 292
Target Start/End: Complemental strand, 5760000 - 5759966
Alignment:
Q  258 aatgagcaatttcataagtgagaagagtaattttc 292  Q
    |||||| ||||||||||||||||||||||||||||    
T  5760000 aatgagtaatttcataagtgagaagagtaattttc 5759966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 460 - 510
Target Start/End: Complemental strand, 11768942 - 11768892
Alignment:
Q  460 gataaacttactaccttattacttgttacgatttgatgtacttgccaattt 510  Q
    |||||||||||||| ||||| ||| ||||||||||||| |||||| |||||    
T  11768942 gataaacttactactttattccttattacgatttgatgcacttgcaaattt 11768892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 450 - 519
Target Start/End: Original strand, 9329239 - 9329308
Alignment:
Q  450 tgtgaagaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    |||| |||| ||||||| |||||| ||| |||||||||| ||||  ||||||  ||||||||||||||||    
T  9329239 tgtggagaacgataaacgtactactttaatacttgttacaatttagtgtactctccaatttcgtccatca 9329308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 509
Target Start/End: Complemental strand, 23420530 - 23420485
Alignment:
Q  464 aacttactaccttattacttgttacgatttgatgtacttgccaatt 509  Q
    |||||||||| |||||||||||||||||||| |  |||||||||||    
T  23420530 aacttactactttattacttgttacgatttggtacacttgccaatt 23420485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 1831233 - 1831193
Alignment:
Q  252 gtagtgaatgagcaatttcataagtgagaagagtaattttc 292  Q
    |||| |||||||||||||| |||||||||| ||||||||||    
T  1831233 gtagcgaatgagcaatttcttaagtgagaaaagtaattttc 1831193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 519
Target Start/End: Original strand, 9354206 - 9354270
Alignment:
Q  455 agaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    |||| ||||||| ||| || ||| |||||||||| ||||| ||||||  ||||||||||||||||    
T  9354206 agaacgataaacgtacaactttaatacttgttacaatttggtgtactccccaatttcgtccatca 9354270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 1e-18; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 455 - 519
Target Start/End: Original strand, 15576189 - 15576253
Alignment:
Q  455 agaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    |||| |||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  15576189 agaacgataaactgactactttattacttgttacgatttgatgcacttgccaatttcgtccatca 15576253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 467 - 519
Target Start/End: Original strand, 13194289 - 13194341
Alignment:
Q  467 ttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    ||||||| |||||||||||||||||||| || |||||||||||||||||||||    
T  13194289 ttactactttattacttgttacgatttggtgcacttgccaatttcgtccatca 13194341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 464 - 519
Target Start/End: Original strand, 13782414 - 13782469
Alignment:
Q  464 aacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    |||||||||| |||||| ||||||||||||| || ||||| |||||||||||||||    
T  13782414 aacttactactttattaattgttacgatttggtgcacttgtcaatttcgtccatca 13782469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 464 - 519
Target Start/End: Original strand, 13789736 - 13789791
Alignment:
Q  464 aacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    |||||||||| |||||| ||||||||||||| || ||||| |||||||||||||||    
T  13789736 aacttactactttattaattgttacgatttggtgcacttgtcaatttcgtccatca 13789791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 464 - 519
Target Start/End: Original strand, 13803991 - 13804046
Alignment:
Q  464 aacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    |||||||||| |||||| ||||||||||||| || ||||| |||||||||||||||    
T  13803991 aacttactactttattaattgttacgatttggtgcacttgtcaatttcgtccatca 13804046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 460 - 519
Target Start/End: Complemental strand, 17858996 - 17858937
Alignment:
Q  460 gataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    |||||||||||||| | |||||||||||| |||||||| || || |||||||||||||||    
T  17858996 gataaacttactacttaattacttgttactatttgatgcacatgtcaatttcgtccatca 17858937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 449 - 519
Target Start/End: Complemental strand, 6091990 - 6091920
Alignment:
Q  449 ttgtgaagaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    ||||| |||| ||||||||| |||| |||||| || ||||||||| ||| ||||| |||||||||||||||    
T  6091990 ttgtggagaacgataaactttctactttattattttttacgatttaatgcacttgtcaatttcgtccatca 6091920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 449 - 507
Target Start/End: Original strand, 15387156 - 15387213
Alignment:
Q  449 ttgtgaagaaagataaacttactaccttattacttgttacgatttgatgtacttgccaa 507  Q
    |||||||||| |||||||||||||| ||||| |||||||||||||| || |||||||||    
T  15387156 ttgtgaagaa-gataaacttactactttattgcttgttacgatttggtgcacttgccaa 15387213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 463 - 519
Target Start/End: Original strand, 6177908 - 6177964
Alignment:
Q  463 aaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    ||||||||||| || |||||||||||||||||||| ||||| ||||||  |||||||    
T  6177908 aaacttactactttgttacttgttacgatttgatgcacttgtcaatttgatccatca 6177964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 449 - 508
Target Start/End: Original strand, 15320078 - 15320136
Alignment:
Q  449 ttgtgaagaaagataaacttactaccttattacttgttacgatttgatgtacttgccaat 508  Q
    |||||||||| |||||||||||||| ||||| |||||||||||||| || |||| |||||    
T  15320078 ttgtgaagaa-gataaacttactactttattgcttgttacgatttggtgcactttccaat 15320136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 460 - 519
Target Start/End: Original strand, 22727243 - 22727302
Alignment:
Q  460 gataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    |||||| ||||||| |||||||||||||| ||||| || ||||| |||||| ||||||||    
T  22727243 gataaatttactactttattacttgttacaatttggtgcacttgtcaattttgtccatca 22727302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 508
Target Start/End: Original strand, 8037051 - 8037097
Alignment:
Q  462 taaacttactaccttattacttgttacgatttgatgtacttgccaat 508  Q
    |||||||||||| |||||||||||||||||||  || ||||||||||    
T  8037051 taaacttactactttattacttgttacgatttagtgcacttgccaat 8037097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 521
Target Start/End: Original strand, 17320789 - 17320845
Alignment:
Q  464 aacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatcact 521  Q
    |||| ||||| ||||||||| |||||||||| || |||||||||||| ||||||||||    
T  17320789 aactaactactttattacttattacgatttggtgcacttgccaattt-gtccatcact 17320845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 2e-17; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 461 - 519
Target Start/End: Complemental strand, 18494613 - 18494555
Alignment:
Q  461 ataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||    
T  18494613 ataaacttactaccttattacttgttacgatttggtgcacttgccaatttcgtctatca 18494555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 450 - 519
Target Start/End: Original strand, 7494486 - 7494555
Alignment:
Q  450 tgtgaagaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    |||| |||| |||||||||||||  |||||||||||||||||||| || |||||||||||||||||||||    
T  7494486 tgtggagaatgataaacttactaatttattacttgttacgatttggtgcacttgccaatttcgtccatca 7494555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 462 - 519
Target Start/End: Complemental strand, 21544737 - 21544680
Alignment:
Q  462 taaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    |||||||||||| |||||||||||||||||||| || |||||||||||||||||||||    
T  21544737 taaacttactactttattacttgttacgatttggtgcacttgccaatttcgtccatca 21544680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 452 - 519
Target Start/End: Original strand, 7143571 - 7143638
Alignment:
Q  452 tgaagaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    ||||||| ||||||||| |||| |||||||||||||||||||| || ||||| ||||||| |||||||    
T  7143571 tgaagaacgataaacttgctactttattacttgttacgatttggtgcacttgtcaatttcatccatca 7143638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 450 - 519
Target Start/End: Complemental strand, 9121095 - 9121026
Alignment:
Q  450 tgtgaagaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    |||| |||| |||||||||||||||||||||||||||||||||||  | ||||| |||||  ||||||||    
T  9121095 tgtggagaacgataaacttactaccttattacttgttacgatttggcgcacttgacaattatgtccatca 9121026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 450 - 519
Target Start/End: Complemental strand, 24469157 - 24469089
Alignment:
Q  450 tgtgaagaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    |||| |||| ||||||||||||||||||||||||||||  |||||||| ||||| |||||| ||||||||    
T  24469157 tgtggagaacgataaacttactaccttattacttgtta-tatttgatgcacttgtcaattttgtccatca 24469089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 450 - 519
Target Start/End: Complemental strand, 24474105 - 24474037
Alignment:
Q  450 tgtgaagaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    |||| |||| ||||||||||||||||||||||||||||  |||||||| ||||| |||||| ||||||||    
T  24474105 tgtggagaacgataaacttactaccttattacttgtta-tatttgatgcacttgtcaattttgtccatca 24474037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 519
Target Start/End: Complemental strand, 4091402 - 4091346
Alignment:
Q  463 aaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    ||||||||||| |||||||||||||||||||| |  ||||||||||||||| |||||    
T  4091402 aaacttactactttattacttgttacgatttggtacacttgccaatttcgttcatca 4091346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 447 - 514
Target Start/End: Complemental strand, 9687152 - 9687085
Alignment:
Q  447 ttttgtgaagaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtc 514  Q
    |||||||  ||| |||||||||||||| ||||||||| ||||||||||||  ||||| ||||||||||    
T  9687152 ttttgtgtggaacgataaacttactactttattacttattacgatttgatacacttgtcaatttcgtc 9687085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 460 - 519
Target Start/End: Original strand, 14074488 - 14074547
Alignment:
Q  460 gataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    |||||||||||||| |||||||||||||||||||  || |||| ||| ||||||||||||    
T  14074488 gataaacttactactttattacttgttacgattttgtgcactttccagtttcgtccatca 14074547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 460 - 519
Target Start/End: Original strand, 14384516 - 14384575
Alignment:
Q  460 gataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    |||||||||||||| |||||||||||||||||||  || |||| ||| ||||||||||||    
T  14384516 gataaacttactactttattacttgttacgattttgtgcactttccagtttcgtccatca 14384575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 464 - 509
Target Start/End: Complemental strand, 2352188 - 2352143
Alignment:
Q  464 aacttactaccttattacttgttacgatttgatgtacttgccaatt 509  Q
    |||||||||| ||||||||||||||||||||||| ||||| |||||    
T  2352188 aacttactactttattacttgttacgatttgatgcacttgtcaatt 2352143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 460 - 509
Target Start/End: Original strand, 7152124 - 7152173
Alignment:
Q  460 gataaacttactaccttattacttgttacgatttgatgtacttgccaatt 509  Q
    |||||||||||||| |||||||||||||||||||| || ||||| |||||    
T  7152124 gataaacttactactttattacttgttacgatttggtgcacttgtcaatt 7152173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 460 - 519
Target Start/End: Original strand, 3401079 - 3401138
Alignment:
Q  460 gataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    |||||| ||||||| |||||||||||||||||||  || ||||| |||||||||| ||||    
T  3401079 gataaaattactactttattacttgttacgattttgtgcacttgtcaatttcgtctatca 3401138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 514
Target Start/End: Original strand, 9071400 - 9071451
Alignment:
Q  463 aaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtc 514  Q
    ||||||||||| || |||||||||||||||||||| | |||| |||||||||    
T  9071400 aaacttactacttttttacttgttacgatttgatgcagttgctaatttcgtc 9071451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 519
Target Start/End: Original strand, 21473018 - 21473089
Alignment:
Q  448 tttgtgaagaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    |||||| |||| || ||||||||||| |||| |||||||| |||||| || |||||  ||||||||||||||    
T  21473018 tttgtggagaatgagaaacttactactttataacttgttatgatttggtgcacttgataatttcgtccatca 21473089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 511
Target Start/End: Complemental strand, 22271103 - 22271056
Alignment:
Q  464 aacttactaccttattacttgttacgatttgatgtacttgccaatttc 511  Q
    ||||||||||||||||||||   ||||||||||| |||||||||||||    
T  22271103 aacttactaccttattactttgcacgatttgatgcacttgccaatttc 22271056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 291
Target Start/End: Original strand, 33342948 - 33342982
Alignment:
Q  257 gaatgagcaatttcataagtgagaagagtaatttt 291  Q
    |||||||||||| ||||||||||||||||||||||    
T  33342948 gaatgagcaattccataagtgagaagagtaatttt 33342982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 450 - 519
Target Start/End: Complemental strand, 7776420 - 7776351
Alignment:
Q  450 tgtgaagaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    |||| |||| |||||||||||||| || |||||||||| |||||| || |||||| ||||| || |||||    
T  7776420 tgtggagaacgataaacttactactttgttacttgttaagatttggtgcacttgctaattttgttcatca 7776351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 7325868 - 7325825
Alignment:
Q  475 ttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    ||||||||||||||||||||||| ||||| ||| |||||||||||    
T  7325868 ttattacttgttacgatttgatgcacttgtcaa-ttcgtccatca 7325825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 474 - 522
Target Start/End: Complemental strand, 20039780 - 20039732
Alignment:
Q  474 cttattacttgttacgatttgatgtacttgccaatttcgtccatcactt 522  Q
    |||| |||||||||  ||||| ||||||||||||||| |||||||||||    
T  20039780 cttactacttgttataatttggtgtacttgccaattttgtccatcactt 20039732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 474 - 522
Target Start/End: Complemental strand, 20049944 - 20049896
Alignment:
Q  474 cttattacttgttacgatttgatgtacttgccaatttcgtccatcactt 522  Q
    |||| ||||| |||| ||||| ||||||||||||||| |||||||||||    
T  20049944 cttactacttattacaatttggtgtacttgccaattttgtccatcactt 20049896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 515
Target Start/End: Original strand, 20342217 - 20342277
Alignment:
Q  455 agaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtcc 515  Q
    |||| |||||||||| | | |||||||||||||||||| | || | |||||||||||||||    
T  20342217 agaatgataaacttattgctttattacttgttacgattcggtgcatttgccaatttcgtcc 20342277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 450 - 519
Target Start/End: Original strand, 7352 - 7421
Alignment:
Q  450 tgtgaagaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    |||| |||| |||||||||||||| |||||||||||||||||||| || ||||| |||||||||||||||    
T  7352 tgtggagaacgataaacttactactttattacttgttacgatttggtgcacttgtcaatttcgtccatca 7421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 461 - 511
Target Start/End: Original strand, 22574 - 22624
Alignment:
Q  461 ataaacttactaccttattacttgttacgatttgatgtacttgccaatttc 511  Q
    ||||| ||||||| |||||||||||||| || ||||| |||||||||||||    
T  22574 ataaatttactactttattacttgttacaatatgatgcacttgccaatttc 22624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 6e-17; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 450 - 519
Target Start/End: Original strand, 31000599 - 31000668
Alignment:
Q  450 tgtgaagaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    |||| |||| |||||||||||||| |||||||||||||| |||||||| |||||| ||||||||||||||    
T  31000599 tgtggagaatgataaacttactactttattacttgttacaatttgatgcacttgcaaatttcgtccatca 31000668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 461 - 518
Target Start/End: Complemental strand, 28455185 - 28455128
Alignment:
Q  461 ataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatc 518  Q
    ||||||||||||| ||| ||||||||| |||||| |||||||||||||||||||||||    
T  28455185 ataaacttactactttaatacttgttatgatttggtgtacttgccaatttcgtccatc 28455128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 450 - 519
Target Start/End: Complemental strand, 41256278 - 41256208
Alignment:
Q  450 tgtgaagaaagataaacttact-accttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    |||| |||| |||||||||||| || |||||| ||||||||||||| || ||||| |||||||||||||||    
T  41256278 tgtggagaacgataaacttacttactttattatttgttacgatttggtgcacttgtcaatttcgtccatca 41256208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 292
Target Start/End: Complemental strand, 42866702 - 42866663
Alignment:
Q  253 tagtgaatgagcaatttcataagtgagaagagtaattttc 292  Q
    ||||||||||||||||||||||  ||||||||||||||||    
T  42866702 tagtgaatgagcaatttcataaacgagaagagtaattttc 42866663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 291
Target Start/End: Original strand, 26632433 - 26632467
Alignment:
Q  257 gaatgagcaatttcataagtgagaagagtaatttt 291  Q
    |||||| ||||||||||||||||||||||||||||    
T  26632433 gaatgaacaatttcataagtgagaagagtaatttt 26632467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 478 - 519
Target Start/End: Original strand, 27591686 - 27591726
Alignment:
Q  478 ttacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    ||||||||||||||||| |||||||||||| |||||||||||    
T  27591686 ttacttgttacgatttggtgtacttgccaa-ttcgtccatca 27591726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 460 - 519
Target Start/End: Original strand, 9516531 - 9516591
Alignment:
Q  460 gataaacttactaccttatt-acttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    |||||||||||||| || || || |||||| |||||||| |||||||||||| ||||||||    
T  9516531 gataaacttactacattttttacgtgttacaatttgatgcacttgccaattttgtccatca 9516591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 455 - 519
Target Start/End: Complemental strand, 11273748 - 11273684
Alignment:
Q  455 agaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    |||| |||||||||||||| |||||||||||||| |||||||| |||||||||||| ||||||||    
T  11273748 agaacgataaacttactactttattacttgttacaatttgatgcacttgccaattttgtccatca 11273684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 461 - 519
Target Start/End: Original strand, 17768654 - 17768712
Alignment:
Q  461 ataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    ||||||||||||| ||||||||| |||||||||| | ||||||||||||||||||||||    
T  17768654 ataaacttactactttattacttcttacgatttggtttacttgccaatttcgtccatca 17768712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 449 - 521
Target Start/End: Complemental strand, 18451131 - 18451059
Alignment:
Q  449 ttgtgaagaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatcact 521  Q
    ||||| |||| ||||||||||| || ||||||||||||||||| || |  |||||||||||||||||||||||    
T  18451131 ttgtggagaacgataaacttacaactttattacttgttacgatctggtccacttgccaatttcgtccatcact 18451059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 455 - 519
Target Start/End: Original strand, 20715835 - 20715899
Alignment:
Q  455 agaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    |||| |||||||||||||||||||||||| |||| ||||| || ||||| |||||||||||||||    
T  20715835 agaacgataaacttactaccttattacttattacaatttggtgcacttgtcaatttcgtccatca 20715899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 464 - 519
Target Start/End: Original strand, 24518959 - 24519014
Alignment:
Q  464 aacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    |||||||||| ||||||||||||||||||||||  |||||||| ||||||||||||    
T  24518959 aacttactactttattacttgttacgatttgatacacttgccagtttcgtccatca 24519014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 455 - 519
Target Start/End: Original strand, 19571048 - 19571112
Alignment:
Q  455 agaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    |||| |||||||||||||| |||||| ||||||||||||| || |||||| ||||| ||||||||    
T  19571048 agaacgataaacttactactttattatttgttacgatttggtgcacttgcaaatttagtccatca 19571112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 460 - 519
Target Start/End: Complemental strand, 16617506 - 16617447
Alignment:
Q  460 gataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    |||||||||||||| |||||||| ||||||||||| || ||||| || ||||||||||||    
T  16617506 gataaacttactactttattactagttacgatttggtgcacttgtcagtttcgtccatca 16617447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 455 - 515
Target Start/End: Original strand, 25682147 - 25682207
Alignment:
Q  455 agaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtcc 515  Q
    |||| |||||| ||||||  |||||||||||||||||||  || |||||||||||||||||    
T  25682147 agaacgataaaattactattttattacttgttacgatttagtgcacttgccaatttcgtcc 25682207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 461 - 516
Target Start/End: Original strand, 17029270 - 17029325
Alignment:
Q  461 ataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtcca 516  Q
    ||||| ||||||  ||||| |||||||||||||| || ||||||||||||||||||    
T  17029270 ataaaattactattttatttcttgttacgatttggtgcacttgccaatttcgtcca 17029325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 292
Target Start/End: Complemental strand, 23223891 - 23223856
Alignment:
Q  257 gaatgagcaatttcataagtgagaagagtaattttc 292  Q
    |||||||||||||||||||||||||||||| |||||    
T  23223891 gaatgagcaatttcataagtgagaagagtatttttc 23223856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 292
Target Start/End: Original strand, 34397224 - 34397263
Alignment:
Q  253 tagtgaatgagcaatttcataagtgagaagagtaattttc 292  Q
    |||||||||| |||||||||| ||||||||||||||||||    
T  34397224 tagtgaatgaacaatttcatatgtgagaagagtaattttc 34397263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 252 - 290
Target Start/End: Original strand, 23294352 - 23294390
Alignment:
Q  252 gtagtgaatgagcaatttcataagtgagaagagtaattt 290  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  23294352 gtagtgaatgatcaattttataagtgagaagagtaattt 23294390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 292
Target Start/End: Complemental strand, 13401312 - 13401275
Alignment:
Q  255 gtgaatgagcaatttcataagtgagaagagtaattttc 292  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  13401312 gtgaatgagcaatttcataagttagaagagcaattttc 13401275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 232
Target Start/End: Complemental strand, 23294386 - 23294345
Alignment:
Q  191 tacttttctcacttatgaaattgttcattcactacatcaacg 232  Q
    |||| ||||||||||| |||||| ||||||||||||||||||    
T  23294386 tactcttctcacttataaaattgatcattcactacatcaacg 23294345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 461 - 517
Target Start/End: Original strand, 24842959 - 24843015
Alignment:
Q  461 ataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccat 517  Q
    ||||||||||||| ||||||||||||| |||||  |  ||||||| |||||||||||    
T  24842959 ataaacttactactttattacttgttatgatttagtaaacttgcccatttcgtccat 24843015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 455 - 519
Target Start/End: Original strand, 32240446 - 32240510
Alignment:
Q  455 agaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    |||| |||||||||||||| |||||||||||||| ||||| || |||||||||||| ||||||||    
T  32240446 agaacgataaacttactactttattacttgttacaatttggtgcacttgccaattttgtccatca 32240510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 13803141 - 13803097
Alignment:
Q  475 ttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||    
T  13803141 ttattacttgttacgatttgatgcacttgtcaatttcgtccatca 13803097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 460 - 519
Target Start/End: Original strand, 12957561 - 12957620
Alignment:
Q  460 gataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    ||||| |||||||| |||||||||||||||||||  || ||||| |||||||||||||||    
T  12957561 gataagcttactactttattacttgttacgatttagtgcacttgtcaatttcgtccatca 12957620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 478 - 519
Target Start/End: Original strand, 1644401 - 1644442
Alignment:
Q  478 ttacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    ||||||||||| ||||| ||||||||||||||||||||||||    
T  1644401 ttacttgttacaatttggtgtacttgccaatttcgtccatca 1644442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 450 - 519
Target Start/End: Original strand, 26853603 - 26853672
Alignment:
Q  450 tgtgaagaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    |||| |||| ||| |||||||||| |||||||||||||||||||| || | || |||||||| |||||||    
T  26853603 tgtggagaacgatgaacttactactttattacttgttacgatttggtgcattttccaatttcatccatca 26853672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 455 - 518
Target Start/End: Original strand, 13305658 - 13305721
Alignment:
Q  455 agaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatc 518  Q
    |||| |||||||| ||||| |||||||||||||| ||||   | ||||||||||||||||||||    
T  13305658 agaacgataaactaactactttattacttgttacaattttgcgcacttgccaatttcgtccatc 13305721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 464 - 510
Target Start/End: Original strand, 28075675 - 28075721
Alignment:
Q  464 aacttactaccttattacttgttacgatttgatgtacttgccaattt 510  Q
    |||||||||| |||||||||||||| ||||| |||||||| ||||||    
T  28075675 aacttactactttattacttgttacaatttggtgtacttgtcaattt 28075721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 469 - 518
Target Start/End: Complemental strand, 28900181 - 28900132
Alignment:
Q  469 actaccttattacttgttacgatttgatgtacttgccaatttcgtccatc 518  Q
    ||||| |||||||||||||| ||||| |||||||| ||||||||| ||||    
T  28900181 actactttattacttgttacaatttggtgtacttgtcaatttcgttcatc 28900132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 463 - 515
Target Start/End: Original strand, 6359202 - 6359254
Alignment:
Q  463 aaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtcc 515  Q
    |||||| |||| |||||| |||||| |||||| || |||||||||||||||||    
T  6359202 aaacttgctactttattaattgttatgatttggtgcacttgccaatttcgtcc 6359254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 28259419 - 28259376
Alignment:
Q  475 ttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    ||||||||||||| |||||| |||||||||||| |||||||||||    
T  28259419 ttattacttgttatgatttggtgtacttgccaa-ttcgtccatca 28259376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000004; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 455 - 516
Target Start/End: Complemental strand, 33913461 - 33913400
Alignment:
Q  455 agaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtcca 516  Q
    |||| |||||| ||||||| |||||||||||||| ||||| || ||||||||||||||||||    
T  33913461 agaacgataaatttactactttattacttgttacaatttggtgcacttgccaatttcgtcca 33913400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 14419354 - 14419398
Alignment:
Q  475 ttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    |||||||||||||||||||| || |||||||||||||||| ||||    
T  14419354 ttattacttgttacgatttggtgcacttgccaatttcgtctatca 14419398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 519
Target Start/End: Complemental strand, 14541128 - 14541073
Alignment:
Q  464 aacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    |||||||||  ||||||||| |||  ||||| ||||||||||||||||||||||||    
T  14541128 aacttactattttattacttattattatttggtgtacttgccaatttcgtccatca 14541073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 460 - 519
Target Start/End: Complemental strand, 25918145 - 25918086
Alignment:
Q  460 gataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatca 519  Q
    |||||||||||||| |||||||||||||| ||||| || ||||| ||||||  |||||||    
T  25918145 gataaacttactacgttattacttgttacaatttggtgcacttgtcaattttttccatca 25918086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 449 - 523
Target Start/End: Complemental strand, 2728517 - 2728443
Alignment:
Q  449 ttgtgaagaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccatcactta 523  Q
    ||||| |||| |||||||||||||| || ||  ||||||||||||| || | ||||| |||| ||||||||||||    
T  2728517 ttgtggagaacgataaacttactactttgtttattgttacgatttggtgcatttgcccattttgtccatcactta 2728443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 258 - 292
Target Start/End: Original strand, 25258198 - 25258232
Alignment:
Q  258 aatgagcaatttcataagtgagaagagtaattttc 292  Q
    ||||| |||||||||||||||||||||||||||||    
T  25258198 aatgaacaatttcataagtgagaagagtaattttc 25258232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 514
Target Start/End: Original strand, 10342999 - 10343064
Alignment:
Q  449 ttgtgaagaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtc 514  Q
    ||||| |||| |||||||||||||  |||||||| ||||||||||  || |||||| |||||||||    
T  10342999 ttgtggagaacgataaacttactattttattactcgttacgattttgtgcacttgctaatttcgtc 10343064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 509
Target Start/End: Original strand, 26419997 - 26420042
Alignment:
Q  464 aacttactaccttattacttgttacgatttgatgtacttgccaatt 509  Q
    |||||||||  ||||||||||||||||||||||  |||||||||||    
T  26419997 aacttactattttattacttgttacgatttgattcacttgccaatt 26420042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 291
Target Start/End: Original strand, 45012857 - 45012890
Alignment:
Q  258 aatgagcaatttcataagtgagaagagtaatttt 291  Q
    |||||||||||||| |||||||||||||||||||    
T  45012857 aatgagcaatttcacaagtgagaagagtaatttt 45012890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 461 - 517
Target Start/End: Complemental strand, 36550 - 36494
Alignment:
Q  461 ataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccat 517  Q
    ||||||||||||| ||||||||||||  |||||| || |||||||||||||||||||    
T  36550 ataaacttactactttattacttgttgtgatttggtgcacttgccaatttcgtccat 36494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 34; Significance: 0.0000000009; HSPs: 2)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 468 - 521
Target Start/End: Complemental strand, 10604 - 10551
Alignment:
Q  468 tactaccttattacttgttacgatttgatgtacttgccaatttcgtccatcact 521  Q
    |||||| ||||||||||||| |||||| || ||||| |||||||||||||||||    
T  10604 tactacattattacttgttatgatttggtgcacttgtcaatttcgtccatcact 10551  T

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Target: scaffold0386; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 460 - 514
Target Start/End: Complemental strand, 7590 - 7536
Alignment:
Q  460 gataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtc 514  Q
    |||||||||||||| ||||||||||||| |||||| || ||||| | ||||||||    
T  7590 gataaacttactactttattacttgttatgatttggtgcacttgtcgatttcgtc 7536  T

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Target: scaffold0362 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 460 - 517
Target Start/End: Original strand, 9964 - 10021
Alignment:
Q  460 gataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgtccat 517  Q
    |||||| ||||||| |||||||||||||||||||| || | ||||||||||| |||||    
T  9964 gataaatttactactttattacttgttacgatttggtgcatttgccaatttcatccat 10021  T

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Target: scaffold0855 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0855
Description:

Target: scaffold0855; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 455 - 513
Target Start/End: Complemental strand, 2079 - 2021
Alignment:
Q  455 agaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgt 513  Q
    |||| |||||| ||||||| ||| || ||||||||||||| || |||||||||||||||    
T  2079 agaacgataaatttactactttaatatttgttacgatttggtgcacttgccaatttcgt 2021  T

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Target: scaffold0847 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0847
Description:

Target: scaffold0847; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 455 - 513
Target Start/End: Complemental strand, 2244 - 2186
Alignment:
Q  455 agaaagataaacttactaccttattacttgttacgatttgatgtacttgccaatttcgt 513  Q
    |||| |||||| ||||||| ||| || ||||||||||||| || |||||||||||||||    
T  2244 agaacgataaatttactactttaatatttgttacgatttggtgcacttgccaatttcgt 2186  T

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Target: scaffold0108 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 509
Target Start/End: Original strand, 9909 - 9953
Alignment:
Q  465 acttactaccttattacttgttacgatttgatgtacttgccaatt 509  Q
    ||||||||| |||||||||||||| |||||||| |||||| ||||    
T  9909 acttactactttattacttgttacaatttgatgcacttgcgaatt 9953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 460 - 488
Target Start/End: Complemental strand, 27394 - 27366
Alignment:
Q  460 gataaacttactaccttattacttgttac 488  Q
    |||||||||||||||||||||||||||||    
T  27394 gataaacttactaccttattacttgttac 27366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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