View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0061-INSERTION-7 (Length: 246)

Name: NF0061-INSERTION-7
Description: NF0061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0061-INSERTION-7
NF0061-INSERTION-7
[»] chr7 (48 HSPs)
chr7 (12-246)||(44940879-44941112)
chr7 (149-246)||(47332353-47332449)
chr7 (149-246)||(47193500-47193597)
chr7 (149-246)||(18942559-18942656)
chr7 (149-246)||(42430621-42430718)
chr7 (149-246)||(6723458-6723555)
chr7 (149-246)||(22563722-22563819)
chr7 (149-246)||(48840240-48840337)
chr7 (147-246)||(9907796-9907895)
chr7 (149-246)||(8919724-8919821)
chr7 (149-246)||(10096964-10097060)
chr7 (149-246)||(10470525-10470621)
chr7 (149-246)||(46855260-46855357)
chr7 (171-246)||(8919529-8919604)
chr7 (147-246)||(45324892-45324991)
chr7 (149-246)||(18942313-18942410)
chr7 (149-246)||(22563968-22564065)
chr7 (147-246)||(45203583-45203682)
chr7 (148-246)||(22642104-22642202)
chr7 (149-245)||(30648221-30648317)
chr7 (180-246)||(9907736-9907802)
chr7 (149-243)||(39304988-39305082)
chr7 (180-217)||(42430590-42430627)
chr7 (161-234)||(42759031-42759104)
chr7 (149-246)||(42759205-42759302)
chr7 (180-235)||(3173566-3173621)
chr7 (180-246)||(10097054-10097119)
chr7 (149-215)||(18942530-18942596)
chr7 (180-246)||(29036389-29036454)
chr7 (180-242)||(35127545-35127607)
chr7 (172-234)||(45203668-45203730)
chr7 (180-246)||(45203831-45203897)
chr7 (180-242)||(45443283-45443345)
chr7 (149-234)||(45443192-45443277)
chr7 (152-246)||(45909939-45910029)
chr7 (149-246)||(48840026-48840122)
chr7 (151-203)||(35127458-35127510)
chr7 (149-217)||(37042994-37043062)
chr7 (180-235)||(9907687-9907742)
chr7 (148-235)||(18808116-18808203)
chr7 (147-246)||(35127700-35127799)
chr7 (180-242)||(6723402-6723464)
chr7 (149-207)||(44449234-44449292)
chr7 (172-234)||(44941098-44941160)
chr7 (172-242)||(47193444-47193514)
chr7 (149-234)||(45324577-45324661)
chr7 (181-217)||(22641950-22641986)
chr7 (146-242)||(29036200-29036296)
[»] chr2 (54 HSPs)
chr2 (149-246)||(5247932-5248029)
chr2 (149-246)||(5482889-5482986)
chr2 (149-235)||(30823642-30823728)
chr2 (149-246)||(11973937-11974034)
chr2 (149-241)||(33616007-33616099)
chr2 (149-246)||(34334547-34334644)
chr2 (149-246)||(45638077-45638174)
chr2 (149-246)||(45638323-45638420)
chr2 (149-240)||(1844500-1844591)
chr2 (149-235)||(7881936-7882022)
chr2 (149-243)||(30512968-30513062)
chr2 (150-244)||(35125575-35125669)
chr2 (172-246)||(43671446-43671520)
chr2 (149-246)||(4603739-4603836)
chr2 (149-242)||(7438437-7438530)
chr2 (162-246)||(33953467-33953551)
chr2 (149-235)||(15786996-15787082)
chr2 (149-234)||(28182143-28182227)
chr2 (149-246)||(28182388-28182485)
chr2 (149-246)||(40343691-40343787)
chr2 (150-242)||(28238450-28238542)
chr2 (180-242)||(43671291-43671353)
chr2 (149-235)||(43671397-43671483)
chr2 (149-246)||(1039135-1039232)
chr2 (149-234)||(15285811-15285896)
chr2 (149-246)||(28582399-28582496)
chr2 (149-246)||(42553690-42553786)
chr2 (149-217)||(5247992-5248060)
chr2 (172-235)||(1038972-1039035)
chr2 (180-235)||(34334638-34334693)
chr2 (180-235)||(35125419-35125474)
chr2 (161-235)||(5483086-5483160)
chr2 (180-242)||(7438338-7438400)
chr2 (180-246)||(30851263-30851328)
chr2 (165-242)||(9144150-9144227)
chr2 (177-242)||(34334737-34334802)
chr2 (149-217)||(35125359-35125427)
chr2 (149-217)||(44436436-44436504)
chr2 (180-235)||(5248081-5248136)
chr2 (180-235)||(5248168-5248223)
chr2 (147-242)||(28182333-28182427)
chr2 (180-235)||(28238716-28238771)
chr2 (147-246)||(28238765-28238862)
chr2 (180-235)||(33953202-33953257)
chr2 (180-242)||(11974098-11974160)
chr2 (180-234)||(29683625-29683679)
chr2 (180-230)||(30513169-30513219)
chr2 (180-242)||(35125517-35125579)
chr2 (180-217)||(28182234-28182271)
chr2 (172-205)||(30851244-30851277)
chr2 (149-246)||(40343750-40343847)
chr2 (149-213)||(4603464-4603528)
chr2 (149-217)||(7881634-7881702)
chr2 (180-244)||(33615787-33615851)
[»] scaffold0121 (2 HSPs)
scaffold0121 (149-244)||(23671-23766)
scaffold0121 (149-246)||(23917-24014)
[»] chr8 (74 HSPs)
chr8 (149-246)||(44728126-44728223)
chr8 (149-242)||(6121524-6121617)
chr8 (147-246)||(9117517-9117616)
chr8 (149-246)||(24469459-24469556)
chr8 (149-246)||(35435573-35435670)
chr8 (149-244)||(4157594-4157689)
chr8 (149-244)||(44318473-44318568)
chr8 (149-242)||(9779132-9779225)
chr8 (149-244)||(27702591-27702686)
chr8 (149-235)||(15315176-15315262)
chr8 (149-235)||(15495545-15495631)
chr8 (149-246)||(1043900-1043997)
chr8 (149-246)||(15891588-15891685)
chr8 (149-246)||(22444937-22445034)
chr8 (149-246)||(23275412-23275509)
chr8 (149-246)||(23403705-23403802)
chr8 (149-246)||(28463822-28463919)
chr8 (149-246)||(29276637-29276734)
chr8 (149-246)||(31827144-31827240)
chr8 (149-242)||(38507079-38507172)
chr8 (146-246)||(1691842-1691941)
chr8 (149-217)||(42691913-42691981)
chr8 (167-246)||(15300915-15300994)
chr8 (167-246)||(15481284-15481363)
chr8 (180-246)||(15891834-15891900)
chr8 (180-234)||(35236799-35236853)
chr8 (149-246)||(2250725-2250822)
chr8 (149-246)||(11482668-11482765)
chr8 (149-233)||(22780077-22780159)
chr8 (149-246)||(29457135-29457232)
chr8 (149-234)||(31826850-31826935)
chr8 (149-217)||(38507293-38507361)
chr8 (149-235)||(28463882-28463968)
chr8 (149-242)||(6121845-6121938)
chr8 (149-246)||(9117765-9117862)
chr8 (149-217)||(6954-7022)
chr8 (162-234)||(35435401-35435473)
chr8 (149-235)||(15300598-15300685)
chr8 (172-235)||(15300866-15300929)
chr8 (149-235)||(15480967-15481054)
chr8 (172-235)||(15481235-15481298)
chr8 (180-235)||(23275363-23275418)
chr8 (180-246)||(23403796-23403863)
chr8 (180-242)||(7144-7206)
chr8 (177-235)||(1043743-1043801)
chr8 (180-234)||(1691935-1691989)
chr8 (149-235)||(2251053-2251139)
chr8 (149-235)||(2257071-2257157)
chr8 (180-242)||(9779033-9779095)
chr8 (180-234)||(15315314-15315368)
chr8 (180-234)||(15495683-15495737)
chr8 (180-242)||(23403857-23403919)
chr8 (180-246)||(35435359-35435425)
chr8 (161-242)||(9117591-9117672)
chr8 (149-234)||(15891648-15891733)
chr8 (149-234)||(15891786-15891871)
chr8 (149-242)||(22444621-22444714)
chr8 (180-229)||(31827101-31827150)
chr8 (161-217)||(29276709-29276765)
chr8 (149-240)||(2257394-2257485)
chr8 (147-234)||(44318423-44318510)
chr8 (161-235)||(7026-7100)
chr8 (180-246)||(7200-7266)
chr8 (149-235)||(24043808-24043894)
chr8 (180-242)||(44728382-44728444)
chr8 (165-234)||(9778958-9779027)
chr8 (149-246)||(15315117-15315213)
chr8 (149-246)||(15495486-15495582)
chr8 (149-234)||(22444889-22444974)
chr8 (149-222)||(29276896-29276969)
chr8 (180-217)||(42692068-42692105)
chr8 (182-242)||(2250818-2250878)
chr8 (146-242)||(31618635-31618731)
chr8 (151-207)||(31618731-31618787)
[»] chr5 (39 HSPs)
chr5 (149-246)||(42092216-42092313)
chr5 (149-246)||(2802892-2802989)
chr5 (149-246)||(39804952-39805049)
chr5 (150-246)||(6641813-6641909)
chr5 (149-246)||(1737635-1737732)
chr5 (149-246)||(2796731-2796828)
chr5 (149-246)||(21250591-21250688)
chr5 (149-246)||(27319005-27319102)
chr5 (147-246)||(20429619-20429718)
chr5 (161-246)||(6642058-6642143)
chr5 (159-246)||(40807944-40808031)
chr5 (149-242)||(8942882-8942975)
chr5 (149-246)||(27495898-27495995)
chr5 (147-246)||(29440281-29440380)
chr5 (149-235)||(28574675-28574761)
chr5 (149-246)||(17849708-17849805)
chr5 (147-235)||(1069065-1069152)
chr5 (147-242)||(42092160-42092255)
chr5 (180-242)||(39805142-39805204)
chr5 (149-242)||(5361489-5361582)
chr5 (149-242)||(39805012-39805105)
chr5 (161-246)||(40807768-40807853)
chr5 (149-242)||(42092012-42092105)
chr5 (153-217)||(8943228-8943292)
chr5 (151-234)||(30004017-30004100)
chr5 (180-242)||(6642002-6642064)
chr5 (161-235)||(21250542-21250616)
chr5 (149-235)||(27318956-27319042)
chr5 (177-242)||(2796890-2796955)
chr5 (149-242)||(6641872-6641965)
chr5 (149-234)||(20429681-20429766)
chr5 (149-242)||(21250274-21250367)
chr5 (180-244)||(1069274-1069338)
chr5 (149-235)||(28571056-28571141)
chr5 (180-238)||(30004106-30004164)
chr5 (149-246)||(2803107-2803204)
chr5 (161-234)||(13626495-13626567)
chr5 (161-241)||(5360546-5360626)
chr5 (161-217)||(8943168-8943224)
[»] chr1 (49 HSPs)
chr1 (149-246)||(4974842-4974939)
chr1 (149-246)||(1102865-1102962)
chr1 (149-246)||(20492002-20492099)
chr1 (149-246)||(38823726-38823823)
chr1 (149-246)||(1695725-1695822)
chr1 (149-238)||(4965057-4965146)
chr1 (149-246)||(29987467-29987564)
chr1 (149-246)||(49113164-49113261)
chr1 (150-246)||(29386349-29386445)
chr1 (147-238)||(29386297-29386388)
chr1 (161-243)||(20491945-20492027)
chr1 (149-242)||(1695785-1695878)
chr1 (149-246)||(18088273-18088369)
chr1 (149-234)||(20491720-20491805)
chr1 (149-234)||(41810745-41810830)
chr1 (149-246)||(45721147-45721244)
chr1 (147-238)||(5739488-5739579)
chr1 (147-234)||(32712180-32712267)
chr1 (149-246)||(4764842-4764940)
chr1 (149-246)||(5277310-5277408)
chr1 (149-242)||(4974902-4974995)
chr1 (149-246)||(39834008-39834105)
chr1 (149-242)||(41810805-41810898)
chr1 (161-246)||(43142877-43142962)
chr1 (149-246)||(48074400-48074496)
chr1 (147-246)||(18087993-18088093)
chr1 (147-246)||(43142628-43142728)
chr1 (149-235)||(18088087-18088173)
chr1 (161-242)||(39834198-39834280)
chr1 (172-234)||(45721230-45721292)
chr1 (149-242)||(4964923-4965016)
chr1 (146-234)||(29386160-29386248)
chr1 (149-213)||(41810963-41811026)
chr1 (150-212)||(24025930-24025992)
chr1 (161-235)||(43142828-43142902)
chr1 (180-234)||(48074352-48074406)
chr1 (149-246)||(4765089-4765186)
chr1 (149-230)||(5739392-5739473)
chr1 (161-242)||(29987411-29987492)
chr1 (146-217)||(5277368-5277438)
chr1 (147-234)||(15615407-15615494)
chr1 (147-234)||(49588077-49588164)
chr1 (180-234)||(1102709-1102763)
chr1 (180-242)||(18030301-18030363)
chr1 (149-234)||(41524628-41524711)
chr1 (172-234)||(43142714-43142776)
chr1 (149-235)||(45721473-45721559)
chr1 (149-246)||(1102618-1102715)
chr1 (180-217)||(4764934-4764971)
[»] chr4 (66 HSPs)
chr4 (149-246)||(14336888-14336985)
chr4 (149-246)||(32751339-32751436)
chr4 (149-246)||(7632839-7632936)
chr4 (149-246)||(14966417-14966514)
chr4 (149-246)||(32751125-32751222)
chr4 (147-246)||(7633027-7633125)
chr4 (149-235)||(41511282-41511368)
chr4 (149-246)||(18598525-18598622)
chr4 (149-246)||(26553942-26554039)
chr4 (149-241)||(25154792-25154884)
chr4 (149-244)||(5322518-5322613)
chr4 (149-244)||(35778975-35779070)
chr4 (149-243)||(13846613-13846707)
chr4 (149-246)||(21956040-21956138)
chr4 (149-246)||(14336642-14336739)
chr4 (149-246)||(40289686-40289783)
chr4 (149-246)||(40998125-40998222)
chr4 (149-246)||(41898381-41898478)
chr4 (149-246)||(50523077-50523174)
chr4 (155-246)||(13870390-13870480)
chr4 (149-244)||(53856734-53856829)
chr4 (149-242)||(32557322-32557413)
chr4 (149-238)||(13864079-13864168)
chr4 (149-242)||(29031282-29031375)
chr4 (149-242)||(29043401-29043494)
chr4 (149-246)||(34979497-34979594)
chr4 (149-246)||(41898136-41898232)
chr4 (145-246)||(46429729-46429830)
chr4 (149-217)||(41898350-41898418)
chr4 (147-246)||(13858877-13858975)
chr4 (146-217)||(13870628-13870699)
chr4 (155-246)||(27389972-27390063)
chr4 (147-242)||(53856544-53856639)
chr4 (180-242)||(14336733-14336795)
chr4 (147-217)||(55358554-55358624)
chr4 (149-242)||(14336832-14336925)
chr4 (161-242)||(18598220-18598301)
chr4 (161-246)||(32557084-32557169)
chr4 (149-246)||(53856486-53856583)
chr4 (180-240)||(21956132-21956192)
chr4 (149-246)||(25363548-25363647)
chr4 (147-242)||(6111999-6112094)
chr4 (180-235)||(13846750-13846805)
chr4 (180-235)||(29031550-29031605)
chr4 (180-235)||(29043670-29043725)
chr4 (130-240)||(3253454-3253564)
chr4 (161-246)||(6112055-6112141)
chr4 (147-229)||(32557130-32557212)
chr4 (149-246)||(20421078-20421175)
chr4 (181-242)||(25154732-25154793)
chr4 (161-242)||(35778917-35778998)
chr4 (161-217)||(20421150-20421206)
chr4 (186-246)||(23159089-23159149)
chr4 (180-240)||(25363494-25363554)
chr4 (180-232)||(34979588-34979640)
chr4 (161-237)||(46429805-46429881)
chr4 (172-235)||(41898218-41898281)
chr4 (149-235)||(23159112-23159198)
chr4 (200-246)||(40289655-40289701)
chr4 (209-246)||(13864131-13864168)
chr4 (149-230)||(14966103-14966184)
chr4 (149-234)||(15631340-15631425)
chr4 (180-217)||(25154633-25154670)
chr4 (149-234)||(40289607-40289692)
chr4 (149-217)||(6111869-6111937)
chr4 (194-242)||(35778724-35778772)
[»] chr3 (54 HSPs)
chr3 (151-244)||(48517931-48518024)
chr3 (147-246)||(25147137-25147236)
chr3 (149-246)||(17580056-17580153)
chr3 (149-246)||(29777261-29777358)
chr3 (155-246)||(11871627-11871718)
chr3 (149-243)||(13657912-13658006)
chr3 (149-246)||(26997214-26997311)
chr3 (149-246)||(26997459-26997556)
chr3 (149-246)||(47220476-47220573)
chr3 (147-246)||(7515633-7515732)
chr3 (149-246)||(13712049-13712146)
chr3 (149-246)||(13712295-13712392)
chr3 (149-246)||(43122853-43122950)
chr3 (149-246)||(52211984-52212081)
chr3 (175-246)||(31324159-31324230)
chr3 (147-242)||(48382232-48382327)
chr3 (151-234)||(50293835-50293918)
chr3 (148-234)||(8112543-8112629)
chr3 (180-246)||(24097952-24098018)
chr3 (149-246)||(7515416-7515513)
chr3 (149-246)||(10820238-10820335)
chr3 (149-242)||(10820428-10820521)
chr3 (149-246)||(11218352-11218449)
chr3 (149-242)||(17579762-17579855)
chr3 (149-234)||(26997411-26997496)
chr3 (149-246)||(33623346-33623443)
chr3 (149-246)||(11218079-11218172)
chr3 (149-245)||(13658160-13658256)
chr3 (149-244)||(54924075-54924168)
chr3 (149-246)||(33623099-33623197)
chr3 (180-238)||(52211932-52211990)
chr3 (149-242)||(31324193-31324286)
chr3 (161-241)||(25147408-25147488)
chr3 (180-235)||(29777458-29777513)
chr3 (180-242)||(33623290-33623352)
chr3 (172-242)||(43122797-43122867)
chr3 (161-242)||(13712121-13712202)
chr3 (161-242)||(33623172-33623253)
chr3 (149-230)||(54923756-54923837)
chr3 (149-229)||(1771971-1772050)
chr3 (150-242)||(8112804-8112896)
chr3 (177-217)||(24098196-24098236)
chr3 (151-235)||(29231050-29231134)
chr3 (194-246)||(29777507-29777559)
chr3 (180-235)||(17580007-17580062)
chr3 (147-234)||(48381910-48381996)
chr3 (149-235)||(7515476-7515562)
chr3 (180-242)||(11218166-11218228)
chr3 (149-235)||(11218272-11218358)
chr3 (180-242)||(24098012-24098074)
chr3 (150-216)||(37148194-37148260)
chr3 (180-234)||(50293775-50293829)
chr3 (180-217)||(11871503-11871540)
chr3 (180-217)||(24098136-24098173)
[»] scaffold0016 (4 HSPs)
scaffold0016 (149-246)||(202297-202394)
scaffold0016 (180-242)||(202388-202450)
scaffold0016 (172-242)||(202487-202557)
scaffold0016 (180-246)||(202543-202609)
[»] chr6 (16 HSPs)
chr6 (149-246)||(5985793-5985890)
chr6 (149-246)||(29134927-29135024)
chr6 (149-217)||(4799578-4799646)
chr6 (151-217)||(33033177-33033243)
chr6 (149-246)||(14942268-14942365)
chr6 (149-242)||(24012504-24012597)
chr6 (172-242)||(29135010-29135080)
chr6 (149-234)||(4799334-4799419)
chr6 (149-217)||(5985853-5985921)
chr6 (149-213)||(9049782-9049846)
chr6 (149-235)||(7858641-7858727)
chr6 (165-217)||(33033220-33033271)
chr6 (180-242)||(4799524-4799586)
chr6 (180-234)||(7858779-7858832)
chr6 (180-238)||(33040935-33040993)
chr6 (149-214)||(4997662-4997727)
[»] scaffold0182 (2 HSPs)
scaffold0182 (161-242)||(23395-23476)
scaffold0182 (149-246)||(22214-22311)
[»] scaffold0220 (3 HSPs)
scaffold0220 (149-246)||(22038-22135)
scaffold0220 (149-235)||(21832-21918)
scaffold0220 (180-242)||(21982-22044)
[»] scaffold0179 (1 HSPs)
scaffold0179 (154-235)||(32422-32502)
[»] scaffold0051 (2 HSPs)
scaffold0051 (149-246)||(60712-60809)
scaffold0051 (149-245)||(60491-60587)


Alignment Details
Target: chr7 (Bit Score: 187; Significance: 1e-101; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 12 - 246
Target Start/End: Original strand, 44940879 - 44941112
Alignment:
Q  12 aagaatacataaattagtgtcgtagtcttaaatttaacaattttaccatcatcgcaaatgttcgaataatttcgtgaagacaattgtttagtattagggt 111  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  44940879 aagaatacataaattagtgtcgtagtcttaaatttaacaagtttaccatcatcgcaaatgttcgaataatttcgtgaagacaattatttcgtattagggt 44940978  T
Q  112 cataatataagataggttaaatatctttccaagaccttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcattt 211  Q
    |||||||||| ||||| ||||||||||| || |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  44940979 cataatataaaataggctaaatatcttttcaggacc-tttaagtttcatgtttgttttaaatagatcatttaagtttctaaggtttaagataagtcattt 44941077  T
Q  212 aagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||| ||||||||||||||||||||||||||||    
T  44941078 aagtttgaagtttatttcggatagatcctttaagt 44941112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 47332353 - 47332449
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||| |||| ||||||||||    
T  47332353 tttaagtttcatgtttgttttagatagatcatttaagtttctaaggtttcagataggtc-tttaagtttaaagtttgtttcgaataggtcctttaagt 47332449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 47193597 - 47193500
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||| ||||||| ||||||| |||||||||||||||||| ||||||||| |||||||||  |||||||||||||||||||||| ||||    
T  47193597 tttaagtttcatgtatgttttagatagatcttttaagtttctaaggttttagataggtcctttaagtttcgagtttatttcggatagatccttcaagt 47193500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 18942656 - 18942559
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||||||| | ||| ||| ||||||||| |||||||| ||||||||| ||||||||| |||||| |||||||||||||||||||||    
T  18942656 tttaagtttcatgtttgtttcagataaatcctttaagtttataaggtttcagataggtcctttaagtttcaagtttgtttcggatagatcctttaagt 18942559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 42430718 - 42430621
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||||||| | ||||||| |||||||||||||||||| ||||||||| |||||||||  ||||| |||||||||| ||||||||||    
T  42430718 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcggataggtcctttaagt 42430621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 6723555 - 6723458
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||||||||||||||||| | |||||||  ||||||||||||||||| |||||| || |||||||||  ||||| |||||||||| ||||||||||    
T  6723555 tttaagttttatgtttgtttcagatagatccgttaagtttctaaggttttagatagatcctttaagtttcgagtttgtttcggataggtcctttaagt 6723458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 22563722 - 22563819
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||| ||||| ||| |||||||||| ||||||||||| ||||||||| |||||||||  ||||| |||||||||| ||||||||||    
T  22563722 tttaagtttcatgtttattttagatatatcatttaaggttctaaggtttcagataggtcctttaagtttggagtttgtttcggataggtcctttaagt 22563819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 48840337 - 48840240
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||||||| | ||||||| |||||||||||||||||| | ||||||| |||||||||  ||||| |||||||||| ||||||||||    
T  48840337 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcaaataggtcctttaagtttcgagtttgtttcggataggtcctttaagt 48840240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 147 - 246
Target Start/End: Complemental strand, 9907895 - 9907796
Alignment:
Q  147 cttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||||| |||||| ||| | ||||||| ||||||||||||| |||| |||||||| ||||||||||  ||||| |||||||||| ||||||||||    
T  9907895 cttttaagtttcatgtttatttcagatagatcctttaagtttctaaagtttcagataggttatttaagtttggagtttgtttcggataggtcctttaagt 9907796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 8919821 - 8919724
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| || ||| ||| | ||||||| |||||||||||||||||| ||||| ||| ||||||||| |||||| |||| ||||||||||||||||    
T  8919821 tttaagtttcatatttatttcagatagatcttttaagtttctaaggtttcagataagtcctttaagtttgaagtttgtttcagatagatcctttaagt 8919724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 10096964 - 10097060
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||||||||||||||||| ||||||||| ||||| |||||||||||| ||||| ||| |||||||||  ||||| |||| ||||| ||||||||||    
T  10096964 tttaagttttatgtttgtttcaaatagatcctttaaatttctaaggtttcagataagtcctttaagttttgagtttgtttc-gataggtcctttaagt 10097060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 10470525 - 10470621
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||| ||||||||||||| | |||||||||||||||||||||||||| ||||||||| |||||  ||  ||||| |||||||||| ||||||||||    
T  10470525 tttaagatttatgtttgtttcagatagatcatttaagtttctaaggtttcagataggtcctttaa-attcgagtttgtttcggataggtcctttaagt 10470621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 46855357 - 46855260
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||||||||||||||||| | ||||||| ||||||||| | |||||| ||||||||| |||||||||  ||||| ||||| |||| ||||||||||    
T  46855357 tttaagttttatgtttgtttcagatagatcctttaagtttatgaggtttcagataggtcctttaagtttggagtttgtttcgaataggtcctttaagt 46855260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 8919529 - 8919604
Alignment:
Q  171 aatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||||| |||||||||||||||||| ||||||||| ||||||||| |||||| |||||||||| || |||||||    
T  8919529 aatagatcctttaagtttctaaggtttcagataggtcctttaagtttcaagtttgtttcggataggtcttttaagt 8919604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 246
Target Start/End: Complemental strand, 45324991 - 45324892
Alignment:
Q  147 cttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||||||||||||||| ||||| ||||||| ||| ||||||||| |||| ||||| ||| |||||||||  ||||| |||| ||||| ||||||||||    
T  45324991 cttttaagttttatgtttcttttagatagatcctttgagtttctaaagtttcagataagtcctttaagtttcgagtttgtttcagataggtcctttaagt 45324892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 18942313 - 18942410
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||||||| | ||||||| ||||||||||| |||||| ||||||||| ||||| |||  ||||| |||||||||| | ||||||||    
T  18942313 tttaagtttcatgtttgtttcagatagatcctttaagtttctgaggtttcagataggtcctttaaatttcgagtttgtttcggataggttctttaagt 18942410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 22564065 - 22563968
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| | |||||||| | |||| || |||||||||||||||||| ||||| ||| |||||||||  ||||| |||||||||| ||||||||||    
T  22564065 tttaagtttaacgtttgtttcagataggtcctttaagtttctaaggtttcagataagtcctttaagtttcgagtttgtttcggataggtcctttaagt 22563968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 246
Target Start/End: Original strand, 45203583 - 45203682
Alignment:
Q  147 cttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||| ||| |||||| ||| | ||||||| |||||| || |||||||| ||||| ||  |||||||||  |||||||||||||||||||||||||||    
T  45203583 cttttaaatttcatgtttatttcagatagatcctttaagattttaaggttttagataagttctttaagttttgagtttatttcggatagatcctttaagt 45203682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 246
Target Start/End: Complemental strand, 22642202 - 22642104
Alignment:
Q  148 ttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||||||| | |||||||| | | || || |||||||||||||||||| ||||| |||||||||||||  ||||| |||||||||  ||||||||||    
T  22642202 ttttaagtttcacgtttgtttcagacaggtcctttaagtttctaaggtttcagatatgtcatttaagttttgagtttgtttcggataagtcctttaagt 22642104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 245
Target Start/End: Original strand, 30648221 - 30648317
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaag 245  Q
    ||||||||| |||||| | | | ||||||| |||||||||||||||||| | ||||||| |||||||||  ||||| |||||||||  |||||||||    
T  30648221 tttaagtttcatgtttatgtcagatagatcctttaagtttctaaggtttcatataggtcctttaagtttcgagtttgtttcggataagtcctttaag 30648317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 9907802 - 9907736
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||||| |||||| || ||||||||| ||||||||||||||||  ||||||||||    
T  9907802 tttaagtttataaggtttcagatagatcctttaagtttgaagtttatttcggataagtcctttaagt 9907736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 39304988 - 39305082
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttta 243  Q
    ||||||||| | |||||||| | ||||||  ||||||||| |||||||| | |||| || |||||||||  ||||| ||||||||||||||||||    
T  39304988 tttaagtttcacgtttgtttcagatagattctttaagtttttaaggtttcatatagatcctttaagtttcgagtttgtttcggatagatccttta 39305082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 217
Target Start/End: Complemental strand, 42430627 - 42430590
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagttt 217  Q
    ||||||||||||||||||||||||||||||||||||||    
T  42430627 tttaagtttctaaggtttaagataggtcatttaagttt 42430590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 234
Target Start/End: Original strand, 42759031 - 42759104
Alignment:
Q  161 gtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    |||||||| | |||| ||||||||||||||||||||| ||||||||| |||||||||  ||||| |||| ||||    
T  42759031 gtttgtttcagataggtcatttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagata 42759104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 42759302 - 42759205
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| | |||| ||| | |||| || |||||||||||||||||| ||||||||  |||||||||  ||||| |||||||||  ||||||||||    
T  42759302 tttaagtttcacgtttatttcatataggtcttttaagtttctaaggtttcagataggttctttaagtttcgagtttgtttcggataagtcctttaagt 42759205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 3173621 - 3173566
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    |||||||||||||||||| ||||||||| |||||||||  ||||| ||||||||||    
T  3173621 tttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcggatag 3173566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 10097054 - 10097119
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||||||||||| ||| ||||| ||| ||||||||| ||||||||||| ||||| ||||||||||    
T  10097054 tttaagtttctaagatttcagataagtc-tttaagtttcaagtttatttcagataggtcctttaagt 10097119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 18942596 - 18942530
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagt 215  Q
    ||||||||| | ||||||||   ||||||| |||||||||||||| ||| |||||||||||||||||    
T  18942596 tttaagtttcaagtttgtttcggatagatcctttaagtttctaagatttcagataggtcatttaagt 18942530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 29036454 - 29036389
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||||||||||||||| ||||||||| |||||||||  ||||| ||||||||||  |||||||||    
T  29036454 tttaagtttctaaggtttcagataggtc-tttaagtttcgagtttgtttcggataggccctttaagt 29036389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 35127545 - 35127607
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||| |||||||||||| |||||||||||||||||||  ||||| |||| ||||| ||||||    
T  35127545 tttaaatttctaaggtttcagataggtcatttaagtttcgagtttgtttcagataggtccttt 35127607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 234
Target Start/End: Original strand, 45203668 - 45203730
Alignment:
Q  172 atagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    ||||||| |||||||||||||||||| ||||||||| |||||||||  ||||| |||| ||||    
T  45203668 atagatcctttaagtttctaaggtttcagataggtcttttaagtttcgagtttgtttcagata 45203730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 45203897 - 45203831
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||||||||||| ||| || |||||| ||||| |||  ||||| |||||||||||||||||||||    
T  45203897 tttaagtttctaagattttaggtaggtcctttaaatttcgagtttgtttcggatagatcctttaagt 45203831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 45443283 - 45443345
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    |||||||||||||||||| ||||||||| |||||||||  ||||| |||| ||||| ||||||    
T  45443283 tttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtccttt 45443345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 234
Target Start/End: Original strand, 45443192 - 45443277
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    ||||||||| |||| ||||| | ||| ||||||||||||| |||||||| |||||| || ||||||||   ||||| |||||||||    
T  45443192 tttaagtttcatgtctgtttcagataaatcatttaagtttttaaggtttcagatagatcctttaagttccgagtttgtttcggata 45443277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 246
Target Start/End: Complemental strand, 45910029 - 45909939
Alignment:
Q  152 aagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||| || ||||||| | ||||||| |||||||||||||||||| |||| ||||    ||||||  ||||| ||||| |||||||||||||||    
T  45910029 aagtttcatatttgtttcagatagatcctttaagtttctaaggtttcagatgggtc----aagtttcgagtttgtttcgtatagatcctttaagt 45909939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 48840026 - 48840122
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| | |||||||| | |||| || ||||| || ||||||||| ||||||||  ||||| |||  ||||| |||||||||||||||||||||    
T  48840026 tttaagtttcacgtttgtttcagataggtcctttaaatt-ctaaggtttcagataggttctttaaattttgagtttgtttcggatagatcctttaagt 48840122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 35127458 - 35127510
Alignment:
Q  151 taagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagata 203  Q
    ||||||| |||||||||| | ||||||| |||||||||||||||||| |||||    
T  35127458 taagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagata 35127510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 37042994 - 37043062
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagttt 217  Q
    ||||||||| ||||||||||   ||||||  |||||||||||||||||| |||||| || |||||||||    
T  37042994 tttaagtttcatgtttgtttaggatagatgctttaagtttctaaggtttcagatagatcctttaagttt 37043062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 9907742 - 9907687
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    |||||||||||||||||| ||||||||| |||||||||  ||||| |||| |||||    
T  9907742 tttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagatag 9907687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 18808203 - 18808116
Alignment:
Q  148 ttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    |||||||||| | |||||||||| |||| || |||| ||||||||||||| |||||| || ||||| |||  ||||| |||| |||||    
T  18808203 ttttaagtttcacgtttgttttagataggtcctttatgtttctaaggttttagatagatcctttaaatttcgagtttgtttcagatag 18808116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 246
Target Start/End: Complemental strand, 35127799 - 35127700
Alignment:
Q  147 cttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||||| | |||||||||| |||  || ||||| |||||||||| | ||||||||| ||| |||||  ||||| ||| |||| | ||||||||||    
T  35127799 cttttaagtttcacgtttgttttagatatgtcctttaaatttctaaggtatcagataggtccttttagtttcgagtttgtttaggatgggtcctttaagt 35127700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 242
Target Start/End: Complemental strand, 6723464 - 6723402
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    |||||||||||||||||| | ||||||| |||||||||  ||||| |||| ||||| ||||||    
T  6723464 tttaagtttctaaggtttcaaataggtcctttaagtttcgagtttgtttcagataggtccttt 6723402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 44449292 - 44449234
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtc 207  Q
    ||||||||||| ||||||| || |||| || ||||| |||||||||||| |||||||||    
T  44449292 tttaagttttacgtttgttctagataggtcctttaaatttctaaggttttagataggtc 44449234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 234
Target Start/End: Original strand, 44941098 - 44941160
Alignment:
Q  172 atagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    ||||||| |||||||||||||||||| |||||| || |||||||||  ||||| |||| ||||    
T  44941098 atagatcctttaagtttctaaggtttcagatagatcctttaagttttgagtttgtttcagata 44941160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 242
Target Start/End: Complemental strand, 47193514 - 47193444
Alignment:
Q  172 atagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||||| || ||||||||||||||| ||||||||| ||||||||| || ||| ||||  |||| ||||||    
T  47193514 atagatccttcaagtttctaaggttttagataggtcctttaagtttcaaatttgtttcatataggtccttt 47193444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 234
Target Start/End: Original strand, 45324577 - 45324661
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    ||||||||||| |||||||| | |||  || |||||||||||||||||| ||||| ||  ||||||||| |||||| ||| |||||    
T  45324577 tttaagttttacgtttgtttcagatatgtcgtttaagtttctaaggtttcagatatgt-ttttaagtttcaagtttgttttggata 45324661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 22641950 - 22641986
Alignment:
Q  181 ttaagtttctaaggtttaagataggtcatttaagttt 217  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  22641950 ttaagtttctaaggtttcagataggtcctttaagttt 22641986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 242
Target Start/End: Original strand, 29036200 - 29036296
Alignment:
Q  146 ccttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    |||||||||||| | |||||||| | |||| |  |||||||||||||||||| || |||||  ||| |||||  ||||| |||| ||||| ||||||    
T  29036200 ccttttaagtttgaagtttgtttaagataggttctttaagtttctaaggtttcaggtaggttctttgagtttcgagtttgtttcagataggtccttt 29036296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 3e-29; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 5247932 - 5248029
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||||||||||||||||| | ||| |||||||||||||| ||||||| ||||||||| ||||||||| |||||| |||||||||||||||||||||    
T  5247932 tttaagttttatgtttgtttcagataaatcatttaagtttcgaaggtttcagataggtcctttaagtttgaagtttgtttcggatagatcctttaagt 5248029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 5482889 - 5482986
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||||||| | ||||||| |||||||||||||||||| ||||||||  |||||||||  ||||| |||||||||||||||||||||    
T  5482889 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtgttttaagtttcgagtttgtttcggatagatcctttaagt 5482986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 235
Target Start/End: Complemental strand, 30823728 - 30823642
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    ||||||||||| |||||||||| ||||||||||||| |||||||||||| ||||||||  |||||||||  ||||||||||||||||    
T  30823728 tttaagttttacgtttgttttagatagatcatttaattttctaaggtttcagataggttctttaagtttcgagtttatttcggatag 30823642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 11973937 - 11974034
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||||||| | ||| ||| |||||||||||||||||| ||||| ||| ||||| ||| |||||| |||||||||||||||||||||    
T  11973937 tttaagtttcatgtttgtttcagataaatcctttaagtttctaaggtttcagataagtcttttaaatttgaagtttgtttcggatagatcctttaagt 11974034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 149 - 241
Target Start/End: Complemental strand, 33616099 - 33616007
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctt 241  Q
    ||||||||| |||||||||||| ||||||| |||||||||||||||||| ||||||||  |||||||||  ||||| |||||||||| |||||    
T  33616099 tttaagtttcatgtttgttttagatagatcctttaagtttctaaggtttcagataggtactttaagttttgagtttgtttcggataggtcctt 33616007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 34334547 - 34334644
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||||||| | ||||||| ||||||||| |||||||| |||||||||||||||||||  ||||| ||| |||||  ||||||||||    
T  34334547 tttaagtttcatgtttgtttcagatagatcctttaagtttttaaggtttcagataggtcatttaagtttcgagtttgtttgggatatgtcctttaagt 34334644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 45638077 - 45638174
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||||||| | |||| || ||||||||||||| |||| ||||||||| |||||||||  ||||| |||||||||| ||||||||||    
T  45638077 tttaagtttcatgtttgtttcagataggtcctttaagtttctaacgtttcagataggtcctttaagtttcgagtttgtttcggataggtcctttaagt 45638174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 45638420 - 45638323
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||||||| | ||||||| |||||||||||||||||| | ||||||| ||||||| |  ||||| |||||||||| ||||||||||    
T  45638420 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcaaataggtcctttaagtatggagtttgtttcggataggtcctttaagt 45638323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 1844591 - 1844500
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcct 240  Q
    ||||||||| |||||| ||| | ||||||| |||||||||||||||||| |||| |||| ||||||||| |||||| |||||||||| ||||    
T  1844591 tttaagtttcatgtttatttcagatagatcctttaagtttctaaggtttcagatcggtcctttaagtttgaagtttgtttcggataggtcct 1844500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 149 - 235
Target Start/End: Complemental strand, 7882022 - 7881936
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    |||||||||  ||||| ||| | |||||||||||||||||||||||||| ||||||||| |||||||||  ||||| ||||||||||    
T  7882022 tttaagtttcgtgtttttttcagatagatcatttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcggatag 7881936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 30512968 - 30513062
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttta 243  Q
    |||||||||  ||||||||| | ||||||  ||||||||||||||||||||||||| || |||||||||  ||||| |||||||||| |||||||    
T  30512968 tttaagtttcttgtttgtttcagatagattctttaagtttctaaggtttaagatagatcctttaagtttggagtttgtttcggataggtccttta 30513062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 150 - 244
Target Start/End: Complemental strand, 35125669 - 35125575
Alignment:
Q  150 ttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaa 244  Q
    |||||||| |||||| ||| | |||||||||||||||||||||||||| ||||| ||  |||||||||  ||||| |||||||||| ||||||||    
T  35125669 ttaagtttcatgtttatttcacatagatcatttaagtttctaaggtttcagataagtgctttaagtttcgagtttgtttcggataggtcctttaa 35125575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 172 - 246
Target Start/End: Complemental strand, 43671520 - 43671446
Alignment:
Q  172 atagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||| |||||||||||||||||| ||||||||| ||||||||| |||||| ||||| |||| ||||||||||    
T  43671520 atagatcctttaagtttctaaggttttagataggtcctttaagtttgaagtttgtttcgaataggtcctttaagt 43671446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 4603836 - 4603739
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||||||| | ||||||| |||||||||||||||||| | |||||||||||||||||  ||||| | || ||||  ||||||||||    
T  4603836 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcaaataggtcatttaagtttcgagtttgtatcagataagtcctttaagt 4603739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 242
Target Start/End: Complemental strand, 7438530 - 7438437
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||||||| | |||||||||| |||| || |||||||||||||||||| ||||||||| ||||| |||  ||||| |||| ||||||||||||    
T  7438530 tttaagtttcacgtttgttttagataggtcttttaagtttctaaggtttcagataggtcctttaaatttcgagtttgtttcagatagatccttt 7438437  T

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Target: chr2; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 162 - 246
Target Start/End: Complemental strand, 33953551 - 33953467
Alignment:
Q  162 tttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||| | ||||||| ||||||||||||| |||| ||||||||| |||||||||  ||||| |||||||||| ||||||||||    
T  33953551 tttgtttcagatagatcctttaagtttctaaagtttcagataggtcctttaagtttcgagtttgtttcggataggtcctttaagt 33953467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 149 - 235
Target Start/End: Complemental strand, 15787082 - 15786996
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    ||||| ||| |||||||||| ||||||||| |||||||||||||||||| ||||| ||| |||||||||  ||||| ||| ||||||    
T  15787082 tttaaatttcatgtttgtttcaaatagatcctttaagtttctaaggtttcagatatgtcctttaagtttcgagtttgtttaggatag 15786996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 234
Target Start/End: Original strand, 28182143 - 28182227
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    ||||||||||| |||||||| |||||| || ||||| |||||||||||| ||||| ||| ||||||||| |||||| |||||||||    
T  28182143 tttaagttttacgtttgtttcaaataggtc-tttaaatttctaaggttttagatatgtcctttaagtttgaagtttgtttcggata 28182227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 28182485 - 28182388
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| | |||||||| | |||| || |||||||||||||||||| ||||||||| |||||||||  ||||| |||| ||||  ||||||||||    
T  28182485 tttaagtttcacgtttgtttcagataggtcctttaagtttctaaggttttagataggtcttttaagtttggagtttgtttcagatatgtcctttaagt 28182388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 40343787 - 40343691
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||||  |||||||||| |||| |  |||||||||||||||||| ||||||||| |||||||||  ||||| |||||||||| | ||||||||    
T  40343787 tttaagttttgagtttgttttagataggtgctttaagtttctaaggtttcagataggtc-tttaagtttcgagtttgtttcggataggtgctttaagt 40343691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 28238450 - 28238542
Alignment:
Q  150 ttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    |||||||| | |||||||| | |||| || |||||||||||||||||| ||||| ||| |||||||||  ||||| |||||||||| ||||||    
T  28238450 ttaagtttcacgtttgtttcagataggtcctttaagtttctaaggttttagataagtcctttaagtttcgagtttgtttcggataggtccttt 28238542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 43671291 - 43671353
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    |||||||||||||||||| ||||||||| ||||||||| |||||| |||| ||||| ||||||    
T  43671291 tttaagtttctaaggtttcagataggtcttttaagtttcaagtttgtttcagataggtccttt 43671353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 235
Target Start/End: Complemental strand, 43671483 - 43671397
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    ||||||||| | ||||||||  ||||| || |||||||||||||||||| ||||||||||||||| |||  ||||| |||| |||||    
T  43671483 tttaagtttgaagtttgtttcgaataggtcctttaagtttctaaggtttcagataggtcatttaaatttcgagtttgtttcagatag 43671397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 1039232 - 1039135
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| | |||||||| | ||| ||  |||| ||||||||||||| ||||||||| |||||||||  ||||| |||||||||  ||||||||||    
T  1039232 tttaagtttcacgtttgtttcagataaattttttaggtttctaaggttttagataggtcctttaagtttcgagtttgtttcggatatgtcctttaagt 1039135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 234
Target Start/End: Original strand, 15285811 - 15285896
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    ||||||||| | |||||||| | |||| |||| ||||||||||||| || ||||||||| |||||||||  ||||| |||||||||    
T  15285811 tttaagtttcaggtttgtttcagataggtcatgtaagtttctaaggcttcagataggtcctttaagtttcgagtttgtttcggata 15285896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 28582399 - 28582496
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| | |||||||| | || | || |||| ||||||||||||| | ||||||| |||||||||  ||||| |||||||||| ||||||||||    
T  28582399 tttaagtttcacgtttgtttcagatgggtcctttacgtttctaaggtttcatataggtcctttaagtttcgagtttgtttcggataggtcctttaagt 28582496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 42553786 - 42553690
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |  ||||||| | |||| |||||||||||| |||||||| ||||||||| |||||||||  ||||| ||| |||||| ||||||||||    
T  42553786 tttaagtttcacatttgtttcagataggtcatttaagtttataaggtttcagataggtcctttaagtttcgagtttgttt-ggataggtcctttaagt 42553690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 5247992 - 5248060
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagttt 217  Q
    ||||||||| | ||||||||   ||||||| |||||||||||||||||| ||||||||| |||||||||    
T  5247992 tttaagtttgaagtttgtttcggatagatcctttaagtttctaaggtttcagataggtcctttaagttt 5248060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 1038972 - 1039035
Alignment:
Q  172 atagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    |||| |||||||||||| |||||||| ||||||||| |||||||||  ||||| ||||||||||    
T  1038972 ataggtcatttaagtttataaggtttcagataggtcctttaagtttccagtttgtttcggatag 1039035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 235
Target Start/End: Original strand, 34334638 - 34334693
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    |||||||||||||||||| |||||||||||||||||||  ||||| |||| |||||    
T  34334638 tttaagtttctaaggtttcagataggtcatttaagtttctagtttgtttcagatag 34334693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 235
Target Start/End: Original strand, 35125419 - 35125474
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    |||||||||||||||||| |||| ||||||||||||||  |||||||||| |||||    
T  35125419 tttaagtttctaaggtttcagatgggtcatttaagtttcgagtttatttcagatag 35125474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 5483160 - 5483086
Alignment:
Q  161 gtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    ||||||||||||||| || |||||||||||| ||||| | ||||||| |||||||||  ||||| |||| |||||    
T  5483160 gtttgttttaaataggtcctttaagtttctacggtttcatataggtcctttaagttttgagtttgtttcagatag 5483086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 7438338 - 7438400
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    |||||||||||||||||| ||||||||| |||||||||  ||||| |||| ||||| ||||||    
T  7438338 tttaagtttctaaggtttcagataggtcttttaagtttcgagtttgtttcagataggtccttt 7438400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 30851328 - 30851263
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||| |||||||||||| ||||||||| |||||||||  ||||| ||||||||||||| |||||||    
T  30851328 tttaaatttctaaggtttcagataggtcctttaagtttcgagttt-tttcggatagatcatttaagt 30851263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 242
Target Start/End: Complemental strand, 9144227 - 9144150
Alignment:
Q  165 gttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    |||| |||||| || |||||||||||| ||||| ||||||||| | |||||||  ||||| ||||||||| |||||||    
T  9144227 gtttcaaataggtcttttaagtttctatggtttcagataggtcctctaagtttcgagtttgtttcggataaatccttt 9144150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 242
Target Start/End: Complemental strand, 34334802 - 34334737
Alignment:
Q  177 tcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||||||||||||||||||| ||||| ||| ||||||||| || ||| |||| ||||| ||||||    
T  34334802 tcatttaagtttctaaggttttagatatgtcctttaagtttcaaatttgtttcagataggtccttt 34334737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 35125359 - 35125427
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagttt 217  Q
    ||||||||| |||||||||| | || | || ||||||||||||| |||| ||||||||| |||||||||    
T  35125359 tttaagtttaatgtttgtttcagatcggtcctttaagtttctaaagtttcagataggtcctttaagttt 35125427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 44436436 - 44436504
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagttt 217  Q
    ||||| ||| |||||| ||| | ||||||| |||||||||||||||||| ||||| ||| |||||||||    
T  44436436 tttaaatttcatgtttttttcagatagatcctttaagtttctaaggtttcagataagtcctttaagttt 44436504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 235
Target Start/End: Original strand, 5248081 - 5248136
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    |||||||||||||||||| ||||||||| |||||||||  ||||| |||| |||||    
T  5248081 tttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagatag 5248136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 5248223 - 5248168
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    |||||||||||||||||| ||||||||| |||||||||  ||||| |||| |||||    
T  5248223 tttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagatag 5248168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 242
Target Start/End: Complemental strand, 28182427 - 28182333
Alignment:
Q  147 cttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    |||||||||||   |||||||| | |||  || |||||||||||||||||| |||||| || |||||||||  ||||| |||| ||||||||||||    
T  28182427 cttttaagtttggagtttgtttcagatatgtcctttaagtttctaaggtttcagatagttc-tttaagtttcgagtttgtttcagatagatccttt 28182333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 28238771 - 28238716
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    |||||||||||||||||| ||||||||| |||||||||  ||||| |||| |||||    
T  28238771 tttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagatag 28238716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 246
Target Start/End: Complemental strand, 28238862 - 28238765
Alignment:
Q  147 cttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||||| |||||||||| | ||||||| ||||||||| |||| ||| ||||||||| ||| |||||  || || ||||| |||| ||||||||||    
T  28238862 cttttaagtttcatgtttgtttcagatagatc-tttaagtttttaagatttcagataggtcctttcagtttcgag-ttgtttcgcataggtcctttaagt 28238765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 235
Target Start/End: Original strand, 33953202 - 33953257
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    ||||||||||||| |||| ||||||||| |||||||||  ||||| ||||||||||    
T  33953202 tttaagtttctaaagtttcagataggtcttttaagtttcgagtttgtttcggatag 33953257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 242
Target Start/End: Complemental strand, 11974160 - 11974098
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    |||||||||||||||||| |||||| || |||||||||  ||||| |||| ||||| ||||||    
T  11974160 tttaagtttctaaggtttcagatagatcctttaagtttcgagtttgtttcagataggtccttt 11974098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 29683625 - 29683679
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    |||||||||||||||||| ||||||||| |||||||||  ||||| ||| |||||    
T  29683625 tttaagtttctaaggtttcagataggtcctttaagtttcgagtttgttttggata 29683679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 230
Target Start/End: Complemental strand, 30513219 - 30513169
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcg 230  Q
    |||||||||||||||||| ||||||||| |||||||||  ||||| |||||    
T  30513219 tttaagtttctaaggtttcagataggtcctttaagttttgagtttgtttcg 30513169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 242
Target Start/End: Complemental strand, 35125579 - 35125517
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||| |||||||||||| ||||||||| |||||||||  ||||| |||| ||||| ||||||    
T  35125579 tttaaatttctaaggtttcagataggtcttttaagtttcgagtttgtttcagataggtccttt 35125517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 217
Target Start/End: Original strand, 28182234 - 28182271
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagttt 217  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  28182234 tttaagtttctaaggttttagataggtcctttaagttt 28182271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 30851277 - 30851244
Alignment:
Q  172 atagatcatttaagtttctaaggtttaagatagg 205  Q
    |||||||||||||||||||||||||| |||||||    
T  30851277 atagatcatttaagtttctaaggtttcagatagg 30851244  T

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Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 40343847 - 40343750
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| ||||||||||    |||||| ||| | |||||||||||| ||||||||| |||||||||  ||||| |||  ||||| | ||||||||    
T  40343847 tttaagtttcatgtttgtttctggtagatccttttaatttctaaggttttagataggtcctttaagttttgagtttgttttagataggtgctttaagt 40343750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 4603464 - 4603528
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaa 213  Q
    ||||||||| | ||||||||   |||| || |||||||||||||||||| ||||||||| |||||    
T  4603464 tttaagtttcacgtttgtttcggataggtcctttaagtttctaaggttttagataggtcctttaa 4603528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 7881634 - 7881702
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagttt 217  Q
    ||||||||| | |||||||| ||||||  | ||||| |||||||||||| |||||| || |||||||||    
T  7881634 tttaagtttcacgtttgtttcaaataggccttttaaatttctaaggtttcagatagatcctttaagttt 7881702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 244
Target Start/End: Original strand, 33615787 - 33615851
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaa 244  Q
    |||||||||||||||||| | |||| || ||||| |||  ||||| |||||||||| ||||||||    
T  33615787 tttaagtttctaaggtttcatatagatcctttaaatttcgagtttgtttcggataggtcctttaa 33615851  T

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Target: scaffold0121 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 149 - 244
Target Start/End: Original strand, 23671 - 23766
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaa 244  Q
    ||||||||| |||||||||||| ||||||||||||||||| |||||||| ||||| ||||||||| |||||||||| |||||||||| ||||||||    
T  23671 tttaagtttcatgtttgttttagatagatcatttaagtttttaaggtttcagataagtcatttaaatttaaagtttgtttcggataggtcctttaa 23766  T

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Target: scaffold0121; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 24014 - 23917
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| | |||||||| | ||||||| ||||| |||||||||||| |||||| || ||| ||||| |||||| |||||||||| | ||||||||    
T  24014 tttaagtttcacgtttgtttcagatagatcctttaaatttctaaggtttcagatagatcctttcagtttcaagtttgtttcggataggttctttaagt 23917  T

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Target: chr8 (Bit Score: 62; Significance: 7e-27; HSPs: 74)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 44728126 - 44728223
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||||||| | ||||||| |||||||||||||||||| ||| ||||| ||||||||| ||||||||||||||||| ||||||||||    
T  44728126 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagacaggtcctttaagtttcaagtttatttcggataggtcctttaagt 44728223  T

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Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 242
Target Start/End: Original strand, 6121524 - 6121617
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||||||| |||||||||||| ||||||| |||||||||||||||||| ||||||||  |||||||||  ||||| |||||||||||||||||    
T  6121524 tttaagtttcatgtttgttttagatagatcctttaagtttctaaggtttcagataggttctttaagtttcgagtttgtttcggatagatccttt 6121617  T

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Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 147 - 246
Target Start/End: Original strand, 9117517 - 9117616
Alignment:
Q  147 cttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||||| |||||||||| | ||||||| |||||||||||||||||| ||||||||| |||||||||  ||||| ||| |||||| ||||||||||    
T  9117517 cttttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgttttggataggtcctttaagt 9117616  T

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Target: chr8; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 24469556 - 24469459
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||| ||| |||||||||| | ||||||| |||||||||||||||||| ||||||||| |||||||||  ||||| |||||||||| ||||||||||    
T  24469556 tttaaatttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttggagtttgtttcggataggtcctttaagt 24469459  T

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Target: chr8; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 35435670 - 35435573
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||||||| | ||||||| |||||||||||||||||| ||||||||| |||||||||  ||||| |||||||||  ||||||||||    
T  35435670 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggttttagataggtcctttaagtttcgagtttgtttcggatatgtcctttaagt 35435573  T

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Target: chr8; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 149 - 244
Target Start/End: Original strand, 4157594 - 4157689
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaa 244  Q
    ||||||||| |||||| ||| | ||||||| |||||||||||||||||| ||||||||| |||||||||  ||||| |||||||||| ||||||||    
T  4157594 tttaagtttcatgtttatttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttggagtttgtttcggataggtcctttaa 4157689  T

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Target: chr8; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 44318568 - 44318473
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaa 244  Q
    ||||||||| ||||||| || ||||||||| ||||||||||||| |||| |||||| || ||||||||| |||||| |||||||||| ||||||||    
T  44318568 tttaagtttcatgtttgcttcaaatagatcctttaagtttctaatgtttcagatagatcttttaagtttgaagtttgtttcggataggtcctttaa 44318473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 242
Target Start/End: Complemental strand, 9779225 - 9779132
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||||||| |||||||||||| |||| || ||||||||| |||||||| ||||||||| |||||||||  ||||| |||| ||||||||||||    
T  9779225 tttaagtttcatgtttgttttagataggtcctttaagtttttaaggtttcagataggtcctttaagtttcgagtttgtttcagatagatccttt 9779132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 27702686 - 27702591
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaa 244  Q
    ||||||||| |||||||||| | |||| || |||||||||||||||||| ||||||||| |||||||||  ||||| |||||||| | ||||||||    
T  27702686 tttaagtttcatgtttgtttcagatagctcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcggatcggtcctttaa 27702591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 15315176 - 15315262
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    |||||||||  |||||||||   |||| || |||||||||||||||||| |||||||||||||||||||  ||||||||||||||||    
T  15315176 tttaagtttcgtgtttgtttcggataggtcctttaagtttctaaggtttcagataggtcatttaagtttcgagtttatttcggatag 15315262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 15495545 - 15495631
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    |||||||||  |||||||||   |||| || |||||||||||||||||| |||||||||||||||||||  ||||||||||||||||    
T  15495545 tttaagtttcgtgtttgtttcggataggtcctttaagtttctaaggtttcagataggtcatttaagtttcgagtttatttcggatag 15495631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 1043997 - 1043900
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| | |||||||||  |||  ||||||||||||||||||||| ||||||||| |||||||||  ||||| |||||||||  ||||||||||    
T  1043997 tttaagtttaacgtttgttttcgataagtcatttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcggatatgtcctttaagt 1043900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 15891588 - 15891685
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| || ||||||| | ||||||| || ||||||||||||||| ||| ||||| ||||||||| |||||| |||| ||||| ||||||||||    
T  15891588 tttaagtttcatatttgtttcagatagatccttaaagtttctaaggtttcagacaggtcctttaagtttgaagtttgtttcagataggtcctttaagt 15891685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 22445034 - 22444937
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||||||| | ||| ||| |||||||||||||||||||| || |||  |||||||||  ||||| |||||||||| ||||||||||    
T  22445034 tttaagtttcatgtttgtttcagataaatcctttaagtttctaaggtttaacatgggttctttaagttttgagtttgtttcggataggtcctttaagt 22444937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 23275509 - 23275412
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| | |||||||| | |||| || |||||||||||||||||| ||||| ||| |||||||||  ||||| |||||||||| ||||||||||    
T  23275509 tttaagtttaacgtttgtttcatataggtcctttaagtttctaaggtttcagatatgtcctttaagtttcgagtttgtttcggataggtcctttaagt 23275412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 23403705 - 23403802
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| | |||||||| |||||| || ||||||||||||| |||| ||||| ||| |||||||||  ||||| |||||||||| ||||||||||    
T  23403705 tttaagtttaacgtttgtttcaaataggtcctttaagtttctaaagtttcagatatgtcctttaagtttcgagtttgtttcggataggtcctttaagt 23403802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 28463822 - 28463919
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||||||| | ||| ||| |||||||||||||||||| ||||| ||  |||||||||  ||||| |||||||||| ||||||||||    
T  28463822 tttaagtttcatgtttgtttcagataaatcctttaagtttctaaggtttcagataagtactttaagttttgagtttgtttcggataggtcctttaagt 28463919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 29276637 - 29276734
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||||||| | |||| || |||||||||||||||||| ||||||||  |||||||||  ||||| ||| |||||| ||||||||||    
T  29276637 tttaagtttcatgtttgtttcagataggtcctttaagtttctaaggtttcagataggttctttaagtttcgagtttgttttggataggtcctttaagt 29276734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 31827240 - 31827144
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||||||| | ||||||  |||||||||||||||||| ||||||||| |||||||||  ||||| ||| |||||| ||||||||||    
T  31827240 tttaagtttcatgtttgtttcagatagattttttaagtttctaaggtttcagataggtcctttaagttttgagtttgttt-ggataggtcctttaagt 31827144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 242
Target Start/End: Original strand, 38507079 - 38507172
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||||||| |||||||| | | ||||||| |||||||||||||| ||| |||||||||||||||||||  ||||| ||| |||||| ||||||    
T  38507079 tttaagtttcatgtttgtctcagatagatcctttaagtttctaagattttagataggtcatttaagtttcgagtttgttttggataggtccttt 38507172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 146 - 246
Target Start/End: Original strand, 1691842 - 1691941
Alignment:
Q  146 ccttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaag 245  Q
    ||||||||||||||| |||||||   ||||||| ||||||||||||||||||  ||||| || |||||||||  ||||||||| ||||| ||||||||||    
T  1691842 ccttttaagttttatctttgtttcggatagatc-tttaagtttctaaggtttcggatagatcctttaagtttcgagtttattttggataaatcctttaag 1691940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 42691913 - 42691981
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagttt 217  Q
    ||||||||| | || ||||||||||||||| |||||||||||||||||| ||||||||| |||||||||    
T  42691913 tttaagtttcacgtctgttttaaatagatcctttaagtttctaaggttttagataggtcctttaagttt 42691981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 167 - 246
Target Start/End: Complemental strand, 15300994 - 15300915
Alignment:
Q  167 tttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||||||||| ||||||||||||| |||| ||||||||| |||||||||  ||||| |||||||||| || |||||||    
T  15300994 tttaaatagatcctttaagtttctaaagtttcagataggtcctttaagtttcgagtttgtttcggatagttcatttaagt 15300915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 167 - 246
Target Start/End: Complemental strand, 15481363 - 15481284
Alignment:
Q  167 tttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||||||||| ||||||||||||| |||| ||||||||| |||||||||  ||||| |||||||||| || |||||||    
T  15481363 tttaaatagatcctttaagtttctaaagtttcagataggtcctttaagtttcgagtttgtttcggatagttcatttaagt 15481284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 15891900 - 15891834
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||||||||||||||| ||||||||| ||||||||| |||||| |||| ||||| ||||||||||    
T  15891900 tttaagtttctaaggtttcagataggtcctttaagtttgaagtttgtttcagataggtcctttaagt 15891834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 35236853 - 35236799
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    |||||||||||||||||| | ||||||||||||||||| ||||||||||||||||    
T  35236853 tttaagtttctaaggtttcaaataggtcatttaagtttcaagtttatttcggata 35236799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 2250725 - 2250822
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||||||||| | || || ||||||||| |||||||| ||||| ||| |||||||||  ||||| |||||||||| |||| |||||    
T  2250725 tttaagtttcatgtttgttttatacaggtcctttaagtttttaaggtttcagataagtcctttaagtttcgagtttgtttcggataggtcctgtaagt 2250822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 11482765 - 11482668
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||| ||| |||||||||||| |||||| |||||||||| |||||||| ||||| ||  ||||||||| |||||| |||| ||||| | ||||||||    
T  11482765 tttaaatttcatgtttgttttagatagattatttaagtttttaaggttttagataagttctttaagtttcaagtttgtttcagataggttctttaagt 11482668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 233
Target Start/End: Original strand, 22780077 - 22780159
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggat 233  Q
    ||||||||| |||||||||| | ||||||| |||||||||||||||||| |||||||||  ||||||||  ||||| ||||||||    
T  22780077 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtc--ttaagtttggagtttgtttcggat 22780159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 29457135 - 29457232
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||||||| | |||| || |||||||||||||| ||| ||||||||  |||||||||  ||||| |||||||||  ||||||||||    
T  29457135 tttaagtttcatgtttgtttcagataggtcttttaagtttctaagatttcagataggttctttaagtttcgagtttgtttcggatatgtcctttaagt 29457232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 234
Target Start/End: Original strand, 31826850 - 31826935
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    ||||||||| | |||| ||||| |||| || |||||||||||||||||| ||||||||| |||||||||  ||||| |||||||||    
T  31826850 tttaagtttcacgtttattttagataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcggata 31826935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 38507361 - 38507293
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagttt 217  Q
    ||||||||| | ||||||||||||||| || |||||||||||||||||| ||||||||  |||||||||    
T  38507361 tttaagtttaacgtttgttttaaataggtcgtttaagtttctaaggtttcagataggttctttaagttt 38507293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 28463882 - 28463968
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    ||||||||||  ||||||||   |||| || |||||||||||||||||| ||||||||| |||||||||  |||||||||| |||||    
T  28463882 tttaagttttgagtttgtttcggataggtcctttaagtttctaaggttttagataggtcttttaagtttcgagtttatttcagatag 28463968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 242
Target Start/End: Complemental strand, 6121938 - 6121845
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||||||| | |||||||| | |||  || |||||||||||||||||| ||||||||||| |||||||  ||||| |||| ||||| ||||||    
T  6121938 tttaagtttcacgtttgtttcagatatgtcctttaagtttctaaggttttagataggtcatataagtttcgagtttgtttcagataggtccttt 6121845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 9117862 - 9117765
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |  ||||||| | |||| || |||||||||||||| ||| ||||| ||| |||||||||  ||||| |||||||||| ||||||||||    
T  9117862 tttaagtttcacatttgtttcagataggtcctttaagtttctaagctttcagataagtcctttaagtttcgagtttgtttcggataggtcctttaagt 9117765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 6954 - 7022
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagttt 217  Q
    ||||||||| |||||||||| | ||| ||| |||||||||||||||||| | ||| |||||||||||||    
T  6954 tttaagtttcatgtttgtttcagatatatcttttaagtttctaaggtttcaaataagtcatttaagttt 7022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 234
Target Start/End: Original strand, 35435401 - 35435473
Alignment:
Q  162 tttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    ||||||| | ||||||| |||||||||||||||||| ||||||||| |||||||||  ||||| |||| ||||    
T  35435401 tttgtttcagatagatcttttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagata 35435473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 15300598 - 15300685
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcattt-aagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    ||||||||| |||||||||| | |||| || ||| |||||||||| |||| ||||||||| |||||||||  ||||| ||||||||||    
T  15300598 tttaagtttcatgtttgtttcagataggtccttttaagtttctaaagttttagataggtcctttaagtttcgagtttgtttcggatag 15300685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 15300929 - 15300866
Alignment:
Q  172 atagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    |||| ||||||||||||||||||||| ||||||||| |||||||||  ||||| |||| |||||    
T  15300929 atagttcatttaagtttctaaggtttcagataggtcctttaagttttgagtttgtttcagatag 15300866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 15480967 - 15481054
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcattt-aagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    ||||||||| |||||||||| | |||| || ||| |||||||||| |||| ||||||||| |||||||||  ||||| ||||||||||    
T  15480967 tttaagtttcatgtttgtttcagataggtccttttaagtttctaaagttttagataggtcctttaagtttcgagtttgtttcggatag 15481054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 15481298 - 15481235
Alignment:
Q  172 atagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    |||| ||||||||||||||||||||| ||||||||| |||||||||  ||||| |||| |||||    
T  15481298 atagttcatttaagtttctaaggtttcagataggtcctttaagttttgagtttgtttcagatag 15481235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 23275418 - 23275363
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    |||||||||||||||||| |||||||||||||||||||  ||||| |||| |||||    
T  23275418 tttaagtttctaaggtttcagataggtcatttaagtttcgagtttgtttcagatag 23275363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 23403796 - 23403863
Alignment:
Q  180 tttaagtttctaagg-tttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||||||||| ||| ||||||||| |||||||||  ||||| |||||||||| ||||||||||    
T  23403796 tttaagtttctaaggttttcagataggtcctttaagtttcgagtttgtttcggataggtcctttaagt 23403863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 242
Target Start/End: Complemental strand, 7206 - 7144
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    |||||||||||||||||| ||||||||| |||||||||  ||||| |||| ||||| ||||||    
T  7206 tttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtccttt 7144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 1043743 - 1043801
Alignment:
Q  177 tcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    ||||||||||||||||||||| ||||||||| |||||||||  ||||| |||| |||||    
T  1043743 tcatttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagatag 1043801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 1691935 - 1691989
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    |||||||||||||||||| |||||||||||||||||||  ||||| |||| ||||    
T  1691935 tttaagtttctaaggtttcagataggtcatttaagtttcgagtttgtttcagata 1691989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 235
Target Start/End: Complemental strand, 2251139 - 2251053
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    ||||||||||| |||||||| | |||| || ||||||||||||| |||| ||||| |||||||| ||||  ||||| |||| |||||    
T  2251139 tttaagttttacgtttgtttcagataggtcctttaagtttctaaagtttcagataagtcatttacgtttcgagtttgtttcagatag 2251053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 2257071 - 2257157
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    ||||||||||| |||||||| | |||| || ||||||||||||| |||| ||||| |||||||| ||||  ||||| |||| |||||    
T  2257071 tttaagttttacgtttgtttcagataggtcctttaagtttctaaagtttcagataagtcatttacgtttcgagtttgtttcagatag 2257157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 9779033 - 9779095
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    |||||||||||||||||| ||||||||| |||||||||  ||||| |||| ||||| ||||||    
T  9779033 tttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtccttt 9779095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 15315368 - 15315314
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    |||||||||||||||||| ||||||||| ||||||||| |||||| |||| ||||    
T  15315368 tttaagtttctaaggtttcagataggtcctttaagtttcaagtttgtttcagata 15315314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 15495737 - 15495683
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    |||||||||||||||||| ||||||||| ||||||||| |||||| |||| ||||    
T  15495737 tttaagtttctaaggtttcagataggtcctttaagtttcaagtttgtttcagata 15495683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 23403857 - 23403919
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    |||||||||||||||||| ||||||||| |||||||||  ||||| |||| ||||| ||||||    
T  23403857 tttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtccttt 23403919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 35435359 - 35435425
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||||||||||||||| ||||||||| |||||||||  | ||| |||| |||||||| |||||||    
T  35435359 tttaagtttctaaggtttcagataggtcctttaagtttcgaatttgtttcagatagatcttttaagt 35435425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 242
Target Start/End: Original strand, 9117591 - 9117672
Alignment:
Q  161 gtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    |||||||||  |||| || |||||||||||||||||| ||||| ||| |||||||||  ||||| |||| ||||| ||||||    
T  9117591 gtttgttttggataggtcctttaagtttctaaggtttcagatatgtcctttaagtttcgagtttgtttcagataggtccttt 9117672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 234
Target Start/End: Original strand, 15891648 - 15891733
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    ||||||||| | |||||||| | |||| || |||||||||||||||||| |||||| || |||||||||  ||||| |||| ||||    
T  15891648 tttaagtttgaagtttgtttcagataggtcctttaagtttctaaggttttagatagatcctttaagtttcgagtttgtttcagata 15891733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 234
Target Start/End: Complemental strand, 15891871 - 15891786
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    ||||||||| | |||||||| | |||| || |||||||||||||||||| |||||| || |||||||||  ||||| |||| ||||    
T  15891871 tttaagtttgaagtttgtttcagataggtcctttaagtttctaaggttttagatagatcctttaagtttcgagtttgtttcagata 15891786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 242
Target Start/End: Original strand, 22444621 - 22444714
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||||||| | ||||||||   |||| || ||||||||||||| |||| ||||||||  |||||||||  ||||| |||||||||| ||||||    
T  22444621 tttaagtttcacgtttgtttcggataggtcctttaagtttctaaagtttcagataggttctttaagtttcgagtttgtttcggataggtccttt 22444714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 31827150 - 31827101
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttc 229  Q
    |||||||||||||||||| ||||||||| |||||||||  ||||||||||    
T  31827150 tttaagtttctaaggtttcagataggtcctttaagtttcgagtttatttc 31827101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 29276709 - 29276765
Alignment:
Q  161 gtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagttt 217  Q
    |||||||||  |||| || |||||||||||||||||| ||||||||| |||||||||    
T  29276709 gtttgttttggataggtcctttaagtttctaaggtttcagataggtcctttaagttt 29276765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 2257485 - 2257394
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcct 240  Q
    ||||||||| |||||||||||| | || || |||||| || |||||||| ||||| ||| ||| |||||  ||||| |||||||||| ||||    
T  2257485 tttaagtttcatgtttgttttatacaggtcctttaagcttttaaggtttcagataagtcctttcagtttcgagtttgtttcggataggtcct 2257394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 234
Target Start/End: Complemental strand, 44318510 - 44318423
Alignment:
Q  147 cttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    ||||||||||| | ||||||||   |||| || ||||| |||||||||||| ||||||||| |||||||||  ||||| |||| ||||    
T  44318510 cttttaagtttgaagtttgtttcggataggtcctttaaatttctaaggtttcagataggtcctttaagtttcgagtttgtttcagata 44318423  T

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Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 7026 - 7100
Alignment:
Q  161 gtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    |||||||| |||||   |||||||||||||||||||| | ||| |||||||||||||  ||||| |||| |||||    
T  7026 gtttgtttcaaatattccatttaagtttctaaggtttcacataagtcatttaagtttcgagtttgtttcagatag 7100  T

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Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 7266 - 7200
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||||||||||||||| | ||||||| |||||||||  ||||| ||| |||||  ||||||||||    
T  7266 tttaagtttctaaggtttcaaataggtcctttaagtttcgagtttgttttggatatgtcctttaagt 7200  T

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Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 24043808 - 24043894
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    ||||||||| | ||||||||   |||| || |||||||||||||||||| | ||||||| |||||||||  ||||| |||| |||||    
T  24043808 tttaagtttgaagtttgtttcggataggtcctttaagtttctaaggtttcaaataggtcctttaagtttcgagtttgtttcagatag 24043894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 242
Target Start/End: Complemental strand, 44728444 - 44728382
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||||||| |||||||| |||||| |  |||||||||  ||||| |||||||||||||||||    
T  44728444 tttaagtttttaaggtttcagatagattctttaagtttcgagtttgtttcggatagatccttt 44728382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 234
Target Start/End: Original strand, 9778958 - 9779027
Alignment:
Q  165 gttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    |||||| ||||||| ||||||||||||| |||| ||||| ||  |||||||||  ||||| |||||||||    
T  9778958 gttttagatagatcctttaagtttctaaagtttcagataagttctttaagttttgagtttgtttcggata 9779027  T

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Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 15315117 - 15315213
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| | |||||||| | |||| || ||||| || ||||||||| ||||| ||| |||||||||   |||| |||||||||| ||||||||||    
T  15315117 tttaagtttcacgtttgtttcagataggtcctttaaatt-ctaaggtttcagataagtcctttaagtttcgtgtttgtttcggataggtcctttaagt 15315213  T

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Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 15495486 - 15495582
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| | |||||||| | |||| || ||||| || ||||||||| ||||| ||| |||||||||   |||| |||||||||| ||||||||||    
T  15495486 tttaagtttcacgtttgtttcagataggtcctttaaatt-ctaaggtttcagataagtcctttaagtttcgtgtttgtttcggataggtcctttaagt 15495582  T

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Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 234
Target Start/End: Complemental strand, 22444974 - 22444889
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    ||||||||||  ||||||||   |||| || |||||||||||||||||| ||||| ||| |||||||||  ||||| |||| ||||    
T  22444974 tttaagttttgagtttgtttcggataggtcctttaagtttctaaggtttcagataagtcctttaagtttcgagtttgtttcagata 22444889  T

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Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 29276969 - 29276896
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagt 222  Q
    ||||||||||| |||| ||| | |||  || |||||||||||||||||| |||||| || ||||||||| ||||    
T  29276969 tttaagttttacgtttatttcagatatgtcctttaagtttctaaggtttcagatagatcctttaagtttcaagt 29276896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 217
Target Start/End: Complemental strand, 42692105 - 42692068
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagttt 217  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  42692105 tttaagtttctaaggtttcagataggtcttttaagttt 42692068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 2250818 - 2250878
Alignment:
Q  182 taagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    |||||||||||||||| |||| ||||||||||||||  ||||| | || ||||| ||||||    
T  2250818 taagtttctaaggttttagatcggtcatttaagtttcgagtttgtatcagataggtccttt 2250878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 242
Target Start/End: Complemental strand, 31618731 - 31618635
Alignment:
Q  146 ccttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||||||||||   |||||||| |||| | || ||||||||||||| |||| ||||| ||| |||||||||  ||||| |||| | ||| ||||||    
T  31618731 ccttttaagtttcgagtttgtttcaaatgggtcctttaagtttctaaagttttagataagtcctttaagtttcgagtttgtttccggtaggtccttt 31618635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 31618787 - 31618731
Alignment:
Q  151 taagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtc 207  Q
    ||||||| | |||||||| | ||||||| |||||||||||||||||| | |||||||    
T  31618787 taagtttcaagtttgtttcagatagatcctttaagtttctaaggtttcaaataggtc 31618731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 7e-27; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 42092313 - 42092216
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||||||||| ||||||| |||||||||||||||||| ||||||||| ||||||||| |||||| |||||||||| || |||||||    
T  42092313 tttaagtttcatgtttgttttagatagatcctttaagtttctaaggtttcagataggtcttttaagtttgaagtttgtttcggataggtcttttaagt 42092216  T

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Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 2802892 - 2802989
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||||||| | ||||||| |||||||||||||||||| ||||||||| |||||||||  ||||| |||||||||| ||||||||||    
T  2802892 tttaagtttcatgtttgtttcagatagatcttttaagtttctaaggttttagataggtcctttaagtttggagtttgtttcggataggtcctttaagt 2802989  T

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Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 39804952 - 39805049
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||||||| | ||||||| |||||||||||||||||| |||| |||| ||||||||| |||||| |||||||||| ||||||||||    
T  39804952 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagatgggtcctttaagtttgaagtttgtttcggataggtcctttaagt 39805049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 150 - 246
Target Start/End: Original strand, 6641813 - 6641909
Alignment:
Q  150 ttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||||| |||||||||| | ||||||| |||||||||||||| ||| ||||||||| ||||||||| |||||| ||||||||||| |||||||||    
T  6641813 ttaagtttcatgtttgtttcagatagatcctttaagtttctaagatttcagataggtcctttaagtttgaagtttgtttcggatagaccctttaagt 6641909  T

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Target: chr5; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 1737732 - 1737635
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||||| ||| ||||||||||| ||||| |||||||| ||||| ||| |||||||||  ||||||||||| |||||||||||||||    
T  1737732 tttaagtttcatgtttgtcttagatagatcatttcagtttttaaggtttcagataagtcctttaagtttggagtttatttcgtatagatcctttaagt 1737635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 2796731 - 2796828
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||||||| | ||||||| |||||||||||||||||| ||||||||| |||||||||  ||||| |||||||||  ||||||||||    
T  2796731 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggttttagataggtcctttaagtttggagtttgtttcggatatgtcctttaagt 2796828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 21250688 - 21250591
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||||||| | ||||||| |||||||||||||||||| |||||||||||||||||||  ||||| ||||| |||| || |||||||    
T  21250688 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggttttagataggtcatttaagtttcgagtttgtttcgaataggtcttttaagt 21250591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 27319102 - 27319005
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||||||||||||||||| | ||||||| ||||| |||||||||||| ||||| ||| ||||||||| |||||| |||||||||| || |||||||    
T  27319102 tttaagttttatgtttgtttcagatagatcctttaaatttctaaggtttcagataagtcctttaagtttgaagtttgtttcggataggtcttttaagt 27319005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 147 - 246
Target Start/End: Original strand, 20429619 - 20429718
Alignment:
Q  147 cttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||||| |||||||||| ||||||||| |||||||||||||||||  ||||||||| |||||||||  ||||| ||| |||||  ||||||||||    
T  20429619 cttttaagtttcatgtttgtttaaaatagatcctttaagtttctaaggttgcagataggtcctttaagttttgagtttgttttggataagtcctttaagt 20429718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 246
Target Start/End: Complemental strand, 6642143 - 6642058
Alignment:
Q  161 gtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||||||| |||| || |||||||||||||||||| ||||||||| |||||||||  ||||| |||||||||| ||||||||||    
T  6642143 gtttgttttagataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcggataggtcctttaagt 6642058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 40808031 - 40807944
Alignment:
Q  159 atgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||| ||| | ||||||| ||||| |||||||||||| ||||||||| ||||||||| |||||| |||||||||| ||||||||||    
T  40808031 atgtttatttcagatagatcctttaactttctaaggtttcagataggtcctttaagtttgaagtttgtttcggataggtcctttaagt 40807944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 242
Target Start/End: Original strand, 8942882 - 8942975
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||||||| |||||||||| | |||| || |||||||||||||||||| | ||||||| |||||||||  ||||| |||||||||| ||||||    
T  8942882 tttaagtttcatgtttgtttcatataggtcctttaagtttctaaggtttcatataggtcttttaagtttcgagtttgtttcggataggtccttt 8942975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 27495898 - 27495995
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| | |||||||| | |||| || |||||||||||||||||| | ||||||| ||||||||| || ||| ||||| |||||||||||||||    
T  27495898 tttaagtttcacgtttgtttcagataggtcctttaagtttctaaggtttcaaataggtcctttaagtttgaaatttgtttcgaatagatcctttaagt 27495995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 246
Target Start/End: Complemental strand, 29440380 - 29440281
Alignment:
Q  147 cttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||||| || ||||||||| ||||||| ||||||||| |||||||| ||||| ||  |||||||||  ||||| |||||||||  ||||||||||    
T  29440380 cttttaagtttcatatttgttttagatagatcctttaagtttttaaggtttcagatatgttttttaagtttggagtttgtttcggataagtcctttaagt 29440281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 149 - 235
Target Start/End: Complemental strand, 28574761 - 28574675
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    ||||||||| || ||||||| | ||||||| |||||||||||||||||| ||||||||| |||||||||  ||||| |||| |||||    
T  28574761 tttaagtttcatatttgtttcagatagatcttttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagatag 28574675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 17849805 - 17849708
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| || ||| ||| | ||||||| ||||||||||||| |||| ||||||||| |||||||||  ||||| ||||| |||| ||||||||||    
T  17849805 tttaagtttcatatttatttcagatagatcgtttaagtttctaaagtttcagataggtcctttaagtttggagtttgtttcgaataggtcctttaagt 17849708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 235
Target Start/End: Original strand, 1069065 - 1069152
Alignment:
Q  147 cttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    ||||||| |||||||||||| | | ||||||| ||||||||||||||||||  ||| ||||||||||||||  ||||| ||||||||||    
T  1069065 cttttaaattttatgtttgtctcagatagatcctttaagtttctaaggtttcggat-ggtcatttaagtttcgagtttgtttcggatag 1069152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 242
Target Start/End: Complemental strand, 42092255 - 42092160
Alignment:
Q  147 cttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||||||||| | ||||||||   |||| || |||||||||||||||||| ||||||||| |||||||||  ||||| |||| ||||| ||||||    
T  42092255 cttttaagtttgaagtttgtttcggataggtcttttaagtttctaaggttttagataggtcctttaagtttcgagtttgtttcagataggtccttt 42092160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 242
Target Start/End: Complemental strand, 39805204 - 39805142
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    |||||||||||||||||| |||||||||||||||||||  ||||| |||| ||||| ||||||    
T  39805204 tttaagtttctaaggttttagataggtcatttaagtttcgagtttctttcagataggtccttt 39805142  T

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Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 242
Target Start/End: Complemental strand, 5361582 - 5361489
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||||||  |||||||||| | |||||||||||||||||||||||||| |||||| |  ||||| |||  ||||| |||| ||||| ||||||    
T  5361582 tttaagttgcatgtttgtttcagatagatcatttaagtttctaaggtttcagatagattctttaaatttcgagtttgtttcagataggtccttt 5361489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 242
Target Start/End: Original strand, 39805012 - 39805105
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||||||| | ||||||||   |||| || |||||||||||||||||| ||||||||| |||||||||  ||||| |||| ||||| ||||||    
T  39805012 tttaagtttgaagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtccttt 39805105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 246
Target Start/End: Original strand, 40807768 - 40807853
Alignment:
Q  161 gtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||||| | ||| ||| |||||||||||||||||| ||||| ||| |||||||||  ||||| |||||||||| || |||||||    
T  40807768 gtttgtttcagataaatcctttaagtttctaaggtttcagataagtcctttaagtttcgagtttgtttcggataggtcgtttaagt 40807853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 242
Target Start/End: Original strand, 42092012 - 42092105
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||||||| | |||||||| | |||| || |||||||||||||| ||| ||||||||| |||||||||  ||||| |||| ||||| ||||||    
T  42092012 tttaagtttcacgtttgtttcagataggtcctttaagtttctaagatttcagataggtcctttaagtttcgagtttgtttcagataggtccttt 42092105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 8943292 - 8943228
Alignment:
Q  153 agttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagttt 217  Q
    ||||| |||||||||| | ||||||| |||||||||||||||||| ||||||||  |||||||||    
T  8943292 agtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggttctttaagttt 8943228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 234
Target Start/End: Original strand, 30004017 - 30004100
Alignment:
Q  151 taagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    ||||||||| |||||||| | |||| || ||||||||| |||||||| ||||| |||||||||||||  ||||| |||| ||||    
T  30004017 taagttttacgtttgtttcagataggtcctttaagtttttaaggttttagatatgtcatttaagtttcgagtttgtttcagata 30004100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 242
Target Start/End: Complemental strand, 6642064 - 6642002
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    |||||||||||||||||| ||||||||| |||||||||  ||||| |||| ||||| ||||||    
T  6642064 tttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagatagttccttt 6642002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 21250616 - 21250542
Alignment:
Q  161 gtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    ||||||||  ||||| || |||||||||||||| ||| ||||||||| |||||||||  ||||| ||||||||||    
T  21250616 gtttgtttcgaataggtcttttaagtttctaagatttcagataggtcctttaagtttcgagtttgtttcggatag 21250542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 235
Target Start/End: Complemental strand, 27319042 - 27318956
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    ||||||||| | ||||||||   |||| || |||||||||||||||||| ||||||||| |||||||||  ||||| |||| |||||    
T  27319042 tttaagtttgaagtttgtttcggataggtcttttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagatag 27318956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 242
Target Start/End: Complemental strand, 2796955 - 2796890
Alignment:
Q  177 tcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    |||||||||||| |||||||| ||||||||| |||||||||  ||||| |||| ||||| ||||||    
T  2796955 tcatttaagtttataaggtttcagataggtcctttaagtttcgagtttgtttcagataggtccttt 2796890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 242
Target Start/End: Original strand, 6641872 - 6641965
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||||||| | ||||||||   ||||| | |||||||||||||| ||| | ||||||| |||||||||  |||||||||| ||||| ||||||    
T  6641872 tttaagtttgaagtttgtttcggatagaccctttaagtttctaagatttcacataggtcctttaagtttcgagtttatttcagataggtccttt 6641965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 234
Target Start/End: Original strand, 20429681 - 20429766
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    ||||||||||  |||||||||  |||  || |||||||||||||||||| ||||||||| |||||||||  ||||| |||| ||||    
T  20429681 tttaagttttgagtttgttttggataagtcctttaagtttctaaggtttcagataggtcttttaagtttcgagtttctttcagata 20429766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 242
Target Start/End: Original strand, 21250274 - 21250367
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||||||| | |||||||| | |||| || || ||||||||||||||| |||||| || |||| ||||  ||||| |||||||||| ||||||    
T  21250274 tttaagtttcaggtttgtttcagataggtccttaaagtttctaaggtttcagatagatcctttatgtttcgagtttgtttcggataggtccttt 21250367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 244
Target Start/End: Complemental strand, 1069338 - 1069274
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaa 244  Q
    |||||||||||||||||| ||||||||| |||||||||  ||||| |||| ||||| | ||||||    
T  1069338 tttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggttctttaa 1069274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 28571056 - 28571141
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    ||||||||| | |||||||| | |||| || |||||||||||||| ||| | ||||||| |||||||||  ||||| ||||||||||    
T  28571056 tttaagtttcacgtttgtttcagataggtcctttaagtttctaagctttcatataggtc-tttaagtttcgagtttgtttcggatag 28571141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 30004106 - 30004164
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatc 238  Q
    |||||||||||||||||| ||||||||| ||||| |||  | |||||||| ||||||||    
T  30004106 tttaagtttctaaggtttcagataggtcctttaaatttcgaatttatttcagatagatc 30004164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 2803204 - 2803107
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| | |||||||| | |||  || |||||||||||||||||| | ||| ||  |||||||||  ||||| |||||||||  ||||||||||    
T  2803204 tttaagtttcacgtttgtttcagatatgtcctttaagtttctaaggtttcatataagtgctttaagtttcgagtttgtttcggatatgtcctttaagt 2803107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 234
Target Start/End: Complemental strand, 13626567 - 13626495
Alignment:
Q  161 gtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    |||||||||  |||| ||||||||||||||||||||| ||||| ||| |||||||||  ||||| ||| |||||    
T  13626567 gtttgttttggataggtcatttaagtttctaaggtttgagatatgtc-tttaagtttcgagtttgttttggata 13626495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 241
Target Start/End: Original strand, 5360546 - 5360626
Alignment:
Q  161 gtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctt 241  Q
    |||||||||| ||||||  |||||||||||| | | | ||||| ||| ||||| ||| |||||| |||||||||| |||||    
T  5360546 gtttgttttagatagattctttaagtttctacgatgttagatatgtcctttaaattttaagtttgtttcggataggtcctt 5360626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 8943224 - 8943168
Alignment:
Q  161 gtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagttt 217  Q
    |||||||  |||||| |||||||||||| |||||||| ||||| ||| |||||||||    
T  8943224 gtttgttccaaataggtcatttaagtttataaggtttcagataagtcctttaagttt 8943168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 7e-27; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 4974842 - 4974939
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||| |||||||||||||| | ||||||| |||||||||||||||||| ||||||||| ||||||||| |||||| |||||||||| ||||||||||    
T  4974842 tttaaattttatgtttgtttcagatagatcctttaagtttctaaggttttagataggtcctttaagtttgaagtttgtttcggataggtcctttaagt 4974939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 1102962 - 1102865
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| || ||||||||| ||||| | |||||||||||||||||| ||||||||| ||||||||| |||||| |||||||||| ||||||||||    
T  1102962 tttaagtttcatatttgttttagatagaccctttaagtttctaaggtttcagataggtcttttaagtttgaagtttgtttcggataggtcctttaagt 1102865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 20492099 - 20492002
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||||||| | ||||||| |||||||||||||||||| |||||||||||||||||||  ||||| |||| ||||| ||||||||||    
T  20492099 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcatttaagtttcgagtttgtttcagataggtcctttaagt 20492002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 38823823 - 38823726
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||||||||||||||||| | ||||||| |||||||||| || |||| ||||||||| |||||||||| ||||| |||||||||| ||||||||||    
T  38823823 tttaagttttatgtttgtttcagatagatcctttaagtttccaaagtttcagataggtcctttaagtttagagtttgtttcggataggtcctttaagt 38823726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 1695725 - 1695822
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||||||||||||||||| | ||||||| |||||||||||||||||| |||| |||| ||||||||| |||||| ||||  |||| ||||||||||    
T  1695725 tttaagttttatgtttgtttcagatagatcctttaagtttctaaggtttcagattggtcctttaagtttgaagtttgtttcaaataggtcctttaagt 1695822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 149 - 238
Target Start/End: Complemental strand, 4965146 - 4965057
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatc 238  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||| ||||| |||  ||||| |||| ||||||||    
T  4965146 tttaagtttcatgtttgttttagatagatcatttaagtttctaaggtttcagataggtcttttaaattttgagtttgtttcagatagatc 4965057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 29987564 - 29987467
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||||||||||||||||| | ||| ||| |||||||||||||||||| | ||||||| ||||||||  |||||| ||||| |||| ||||||||||    
T  29987564 tttaagttttatgtttgtttcagataaatcctttaagtttctaaggtttcaaataggtcctttaagttggaagtttgtttcgaataggtcctttaagt 29987467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 49113261 - 49113164
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||| ||| | ||||||| |||||||||||||||||| ||| | ||| |||||||||  ||||| |||||||||||||||||||||    
T  49113261 tttaagtttcatgtttatttcagatagatcctttaagtttctaaggtttcagacatgtcctttaagtttcgagtttgtttcggatagatcctttaagt 49113164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 150 - 246
Target Start/End: Complemental strand, 29386445 - 29386349
Alignment:
Q  150 ttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||||| |||||||||| | ||||||||||||||||||||| |||| ||||||||| |||||||||  ||||| ||||| |||| || |||||||    
T  29386445 ttaagtttcatgtttgtttcagatagatcatttaagtttctaaagtttcagataggtcttttaagtttggagtttgtttcgaataggtcttttaagt 29386349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 238
Target Start/End: Complemental strand, 29386388 - 29386297
Alignment:
Q  147 cttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatc 238  Q
    |||||||||||   ||||||||  ||||| || |||||||||||||||||| ||||||||| |||||||||  |||||||||||||||||||    
T  29386388 cttttaagtttggagtttgtttcgaataggtcttttaagtttctaaggtttcagataggtcctttaagtttcgagtttatttcggatagatc 29386297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 20492027 - 20491945
Alignment:
Q  161 gtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttta 243  Q
    |||||||| | |||| || |||||||||||||||||| ||||||||| |||||||||  |||||||||||||||| |||||||    
T  20492027 gtttgtttcagataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttatttcggataggtccttta 20491945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 242
Target Start/End: Original strand, 1695785 - 1695878
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||||||| | |||||||| |||||| || |||||||||||||||||| ||||||||| |||||||||  ||||| |||| ||||| ||||||    
T  1695785 tttaagtttgaagtttgtttcaaataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtccttt 1695878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 18088369 - 18088273
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||||||||| ||| |||||||||||||||||| ||| | ||||||| || ||||||  ||||| |||||||||| ||||||||||    
T  18088369 tttaagtttcatgtttgttttagataaatcatttaagtttctaagatttcaaataggtc-ttcaagtttggagtttgtttcggataggtcctttaagt 18088273  T

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Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 234
Target Start/End: Original strand, 20491720 - 20491805
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    ||||||||| |||||||||||  ||||||| ||||||||| |||||||| ||||||||| |||||||||  ||||| |||||||||    
T  20491720 tttaagtttcatgtttgttttggatagatcttttaagtttttaaggtttcagataggtcctttaagtttcgagtttgtttcggata 20491805  T

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Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 234
Target Start/End: Original strand, 41810745 - 41810830
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    ||||||||| | |||||||| | |||| | ||||||||||||||||||| ||||||||| ||||||||| |||||| |||||||||    
T  41810745 tttaagtttcacgtttgtttcagataggttatttaagtttctaaggtttcagataggtcctttaagttttaagtttgtttcggata 41810830  T

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Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 45721147 - 45721244
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||||||| |  |||||| |||||||||||||||||| ||||| ||| |||||||||  || || ||||||||||||| |||||||    
T  45721147 tttaagtttcatgtttgtttcaggtagatcttttaagtttctaaggtttcagatatgtcctttaagtttcgagcttgtttcggatagatcatttaagt 45721244  T

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Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 238
Target Start/End: Complemental strand, 5739579 - 5739488
Alignment:
Q  147 cttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatc 238  Q
    ||||||||||| | |||||||| | ||||||| |||||||||||||||||| ||||||||  |||||||||  ||||| |||| ||||||||    
T  5739579 cttttaagtttcacgtttgtttcagatagatcttttaagtttctaaggtttcagataggttctttaagtttcgagtttgtttcagatagatc 5739488  T

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Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 234
Target Start/End: Original strand, 32712180 - 32712267
Alignment:
Q  147 cttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    ||||||||||| |||||||||| | ||||||| |||||||||||||| ||| ||||| ||| |||||||||  ||||| |||||||||    
T  32712180 cttttaagtttcatgtttgtttcagatagatcctttaagtttctaagatttcagataagtcctttaagtttcgagtttgtttcggata 32712267  T

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Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 4764842 - 4764940
Alignment:
Q  149 tttaagttttatgtttgttttaa-atagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||| |||| | ||||||| |||||||||||||| ||| | ||||||| |||||||||  ||||| |||||||||| ||||||||||    
T  4764842 tttaagtttcatgttttttttcagatagatcctttaagtttctaagatttcaaataggtcctttaagtttgtagtttgtttcggataggtcctttaagt 4764940  T

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Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 5277310 - 5277408
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggt-catttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||||||  ||||||||| | ||||||| ||||||||||| |||||| |||||||| | |||||||||   |||| |||||||||||||||||||||    
T  5277310 tttaagtttcctgtttgtttcagatagatcttttaagtttctgaggtttcagataggtccttttaagttttgtgtttgtttcggatagatcctttaagt 5277408  T

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Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 242
Target Start/End: Original strand, 4974902 - 4974995
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||||||| | ||||||||   |||| || |||||||||||||||||| ||||||||| |||||||||  ||||| |||| ||||||||||||    
T  4974902 tttaagtttgaagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaagttttgagtttgtttcagatagatccttt 4974995  T

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Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 39834008 - 39834105
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| | |||||||| | |||| || |||||||||||||||||| ||||| ||| |||||||||  ||||| ||| |||||| ||||||||||    
T  39834008 tttaagtttcacgtttgtttcagataggtcctttaagtttctaaggtttcagataagtcctttaagtttcgagtttgttttggataggtcctttaagt 39834105  T

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Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 242
Target Start/End: Original strand, 41810805 - 41810898
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||||||||| ||||||||   |||  ||||||||||||||||||||| ||||||||| |||||||||  ||||| |||| ||||| ||||||    
T  41810805 tttaagttttaagtttgtttcggatatgtcatttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtccttt 41810898  T

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Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 161 - 246
Target Start/End: Complemental strand, 43142962 - 43142877
Alignment:
Q  161 gtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||||||||| |||||||| |||||||||||| |||||  |||||||| |||  ||||| |||| ||||| ||||||||||    
T  43142962 gtttgttttaaataggtcatttaaatttctaaggtttcagatacatcatttaaatttcgagtttgtttcagataggtcctttaagt 43142877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 48074496 - 48074400
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||||||||||||||||| | |||| || ||||||||||||| |||||||||| ||| |||||||||  ||||| |||| ||||  ||||||||||    
T  48074496 tttaagttttatgtttgtttcagataggtcctttaagtttctaa-gtttaagataagtcctttaagtttcgagtttgtttcagatatgtcctttaagt 48074400  T

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Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 246
Target Start/End: Original strand, 18087993 - 18088093
Alignment:
Q  147 cttttaagttttatgtttgttttaaatagatcattt-aagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaag 245  Q
    ||||||||||| | |||||||| | |||| || ||| ||||||||||||||| |||||| || |||||||||  ||||| |||| |||||||||||||||    
T  18087993 cttttaagtttaacgtttgtttaagataggtccttttaagtttctaaggtttcagatagatcctttaagttttgagtttgtttcagatagatcctttaag 18088092  T
Q  246 t 246  Q
    |    
T  18088093 t 18088093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 246
Target Start/End: Original strand, 43142628 - 43142728
Alignment:
Q  147 cttttaagttttat-gtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaag 245  Q
    |||||||||||| | |||| | ||| ||||||| |||||||||||||||||| ||||| ||  |||||||||  ||||| ||||||||||||| ||||||    
T  43142628 cttttaagtttttttgtttatgttagatagatcttttaagtttctaaggtttcagatatgttttttaagtttcgagtttgtttcggatagatcttttaag 43142727  T
Q  246 t 246  Q
    |    
T  43142728 t 43142728  T

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Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 18088087 - 18088173
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    ||||||||||  |||||||| | ||||||| |||||||||||||||||| ||||||||  |||||||||  ||||| |||| |||||    
T  18088087 tttaagttttgagtttgtttcagatagatcctttaagtttctaaggtttcagataggtactttaagtttcgagtttgtttcagatag 18088173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 242
Target Start/End: Complemental strand, 39834280 - 39834198
Alignment:
Q  161 gtttgttttaaatagatcatttaagtttctaaggtttaagataggt-catttaagtttaaagtttatttcggatagatccttt 242  Q
    |||||||||| |||| ||||||||||||||||||||| |||||||| | |||||||||  ||||| |||| ||||| ||||||    
T  39834280 gtttgttttagataggtcatttaagtttctaaggtttcagataggtccttttaagtttcgagtttgtttcagataggtccttt 39834198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 234
Target Start/End: Original strand, 45721230 - 45721292
Alignment:
Q  172 atagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||  ||||| |||| ||||    
T  45721230 atagatcatttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagata 45721292  T

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Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 242
Target Start/End: Original strand, 4964923 - 4965016
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||||||||  ||||||||   |||| || |||||||||||||||||| ||||||||| ||||| ||| |||||| |||| ||||| ||||||    
T  4964923 tttaagttttgagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaaatttcaagtttgtttcagataggtccttt 4965016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 234
Target Start/End: Original strand, 29386160 - 29386248
Alignment:
Q  146 ccttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    ||||||||||||   ||||||||   |||| ||||||||||||||||||||| ||||||||| |||||||||  ||||| |||| ||||    
T  29386160 ccttttaagtttcgagtttgtttcggataggtcatttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagata 29386248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 41811026 - 41810963
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaa 213  Q
    ||||||||| |||||||||| | ||||||| |||||||||||||||||| ||||||||| |||||    
T  41811026 tttaagtttcatgtttgtttcagatagatc-tttaagtttctaaggtttcagataggtcctttaa 41810963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 150 - 212
Target Start/End: Complemental strand, 24025992 - 24025930
Alignment:
Q  150 ttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcattta 212  Q
    |||||||| |||||||||| ||||||||||||||| ||| |||||||| | |||| |||||||    
T  24025992 ttaagtttcatgtttgtttcaaatagatcatttaaatttataaggtttcatatagatcattta 24025930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 43142902 - 43142828
Alignment:
Q  161 gtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    |||||||| | |||| || |||||||||||||| ||| ||||||||| ||| |||||| ||||| ||||||||||    
T  43142902 gtttgtttcagataggtcctttaagtttctaagatttcagataggtcctttgagtttagagtttgtttcggatag 43142828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 48074406 - 48074352
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    |||||||||||||||||| |||||||||||||||||||  ||||| |||| ||||    
T  48074406 tttaagtttctaaggtttcagataggtcatttaagttttgagtttgtttcagata 48074352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 4765186 - 4765089
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| | |||||||| | |||| |  |||||||||||||||||| | ||||||  |||||||||  ||||| |||||||||  ||||||||||    
T  4765186 tttaagtttcacgtttgtttcagataggttctttaagtttctaaggttttaaataggttctttaagtttcgagtttgtttcggatatgtcctttaagt 4765089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 230
Target Start/End: Original strand, 5739392 - 5739473
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcg 230  Q
    ||||||||| | |||||||| | |||  || |||||||||||||||||| ||||||||| |||||||||  ||||| |||||    
T  5739392 tttaagtttcacgtttgtttcagatatgtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcg 5739473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 242
Target Start/End: Complemental strand, 29987492 - 29987411
Alignment:
Q  161 gtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||||||  ||||| || |||||||||||||||||| |||||| || |||||||||  ||||| |||| ||||| ||||||    
T  29987492 gtttgtttcgaataggtcctttaagtttctaaggtttcagatagatcctttaagtttcgagtttgtttcagataggtccttt 29987411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 5277368 - 5277438
Alignment:
Q  146 ccttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagttt 217  Q
    ||||||||||||| |||||||||   ||||||| |||||||||||||||||   |||||||| |||||||||    
T  5277368 ccttttaagttttgtgtttgtttcggatagatcctttaagtttctaaggttcccgataggtc-tttaagttt 5277438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 234
Target Start/End: Complemental strand, 15615494 - 15615407
Alignment:
Q  147 cttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    |||||||||||   |||||||| | |||| || |||||||||||||||||| ||||| ||| |||||||||  ||||| |||| ||||    
T  15615494 cttttaagtttcgagtttgtttcagataggtcctttaagtttctaaggtttcagatatgtcctttaagtttcgagtttgtttcagata 15615407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 234
Target Start/End: Original strand, 49588077 - 49588164
Alignment:
Q  147 cttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    |||||||||||   ||||||||   |||| || |||||||||||||||||| |||||| || ||||||||  |||||| |||||||||    
T  49588077 cttttaagtttcgagtttgtttcggataggtcctttaagtttctaaggtttcagatagatcctttaagttccaagtttgtttcggata 49588164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 1102709 - 1102763
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    |||||||||||||| ||| ||||||||| |||||||||  |||||||||| ||||    
T  1102709 tttaagtttctaagatttcagataggtcctttaagtttcgagtttatttcagata 1102763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 18030301 - 18030363
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    |||||||||||||||||| | ||||||| |||||||||  ||||| | |||||||| ||||||    
T  18030301 tttaagtttctaaggtttcaaataggtcctttaagttttgagtttgtgtcggataggtccttt 18030363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 234
Target Start/End: Original strand, 41524628 - 41524711
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    ||||| ||| |||||||||||| ||||||  ||||||||| ||||||||  |||||||  ||||| ||| |||||| |||||||||    
T  41524628 tttaattttcatgtttgttttagatagat--tttaagtttttaaggtttcggataggtattttaaatttgaagtttgtttcggata 41524711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 234
Target Start/End: Original strand, 43142714 - 43142776
Alignment:
Q  172 atagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    ||||||| |||||||||||||||| | ||||| ||| |||||||||  |||||||||| ||||    
T  43142714 atagatcttttaagtttctaaggtgtcagatatgtcctttaagtttcgagtttatttcagata 43142776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 235
Target Start/End: Complemental strand, 45721559 - 45721473
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    ||||||||| | |||||||| | |||  || |||||||||||||||||| | ||||||| |||||||||  ||||| ||||| ||||    
T  45721559 tttaagtttcacgtttgtttcagatatgtcttttaagtttctaaggtttcatataggtcctttaagtttcgagtttgtttcgtatag 45721473  T

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Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 1102618 - 1102715
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||| ||| |||||||||||| |||| || ||||| |||||||||||| ||| | ||  |||||||||  ||||| |||| |||||  |||||||||    
T  1102618 tttaaatttcatgtttgttttagataggtcctttaaatttctaaggtttcagacatgttctttaagtttcgagtttgtttcagataggccctttaagt 1102715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 217
Target Start/End: Original strand, 4764934 - 4764971
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagttt 217  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  4764934 tttaagtttctaaggtttcagataggtcctttaagttt 4764971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 14336985 - 14336888
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||||||| | ||||||| |||||||||||||||||| |||| |||| ||||||||| |||||| |||||||||| ||||||||||    
T  14336985 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagatgggtcctttaagtttgaagtttgtttcggataggtcctttaagt 14336888  T

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Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 32751436 - 32751339
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||||||||||||||||| | |||| || |||||||||||||||||| |||||| || |||||||||||||||| |||| ||||| ||||||||||    
T  32751436 tttaagttttatgtttgtttcagataggtcttttaagtttctaaggttttagatagctcctttaagtttaaagtttgtttcagataggtcctttaagt 32751339  T

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Target: chr4; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 7632839 - 7632936
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||| ||| | ||||||| |||||||||||||||||| ||||| ||| ||||||||| |||||| |||||||||| ||||||||||    
T  7632839 tttaagtttcatgtttatttcagatagatcctttaagtttctaaggtttcagataagtcctttaagtttgaagtttgtttcggataggtcctttaagt 7632936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 14966514 - 14966417
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||| |||||||||||||||| ||||||| |||||| ||||||||||| ||||||||  |||||||||  ||||| |||||||||| ||||||||||    
T  14966514 tttaaattttatgtttgttttagatagatcgtttaaggttctaaggttttagataggttctttaagtttcgagtttgtttcggataggtcctttaagt 14966417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 32751125 - 32751222
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||| ||| |||||||||| | ||||||  |||||||||||||||||| ||||||||||||||||||| |||||| |||||||||| || |||||||    
T  32751125 tttaaatttcatgtttgtttaagatagattctttaagtttctaaggtttcagataggtcatttaagtttgaagtttgtttcggataggtcttttaagt 32751222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 147 - 246
Target Start/End: Complemental strand, 7633125 - 7633027
Alignment:
Q  147 cttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||||||| | |||||| || ||| || |||||||||||||||||| ||||||||| ||||||||| |||||| |||||||||| ||||||||||    
T  7633125 cttttaagttttacgattgtttcaa-taggtcctttaagtttctaaggttttagataggtcctttaagtttcaagtttgtttcggataggtcctttaagt 7633027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 149 - 235
Target Start/End: Complemental strand, 41511368 - 41511282
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    |||||||||||||||| ||| | ||||||||||||||||||||| |||| ||||||||| ||||| ||| |||||| ||||||||||    
T  41511368 tttaagttttatgtttatttcagatagatcatttaagtttctaaagtttcagataggtcctttaaattttaagtttgtttcggatag 41511282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 18598622 - 18598525
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| | |||||||||| |||| || | |||||||||||||||| ||||||||| |||||||||  ||||| |||||||||| ||||||||||    
T  18598622 tttaagtttcaagtttgttttagataggtcctctaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcggataggtcctttaagt 18598525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 26554039 - 26553942
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||| ||| | ||||||| |||||||||||||||||| || |||||| |||||||||  ||||| |||||||||| ||||||||||    
T  26554039 tttaagtttcatgtttatttcagatagatcctttaagtttctaaggtttcagttaggtcctttaagtttcgagtttgtttcggataggtcctttaagt 26553942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 241
Target Start/End: Complemental strand, 25154884 - 25154792
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctt 241  Q
    ||||||||| |||||||||| | ||||||| |||||||||||||||||| ||| ||||| |||||| ||| ||||| |||||||||| |||||    
T  25154884 tttaagtttcatgtttgtttcagatagatcttttaagtttctaaggtttcagacaggtcctttaagattagagtttgtttcggataggtcctt 25154792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 244
Target Start/End: Original strand, 5322518 - 5322613
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaa 244  Q
    ||||||||| |||||||||| ||||||||| ||||| |||||||||||  ||||||||| |||||||||  ||||| ||| |||||| ||||||||    
T  5322518 tttaagtttcatgtttgtttaaaatagatcctttaaatttctaaggttgcagataggtcctttaagttttgagtttgttttggataggtcctttaa 5322613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 35779070 - 35778975
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaa 244  Q
    ||||||||| |||||||||||  ||||||| ||||||||| |||||||| ||||| |||||||||||||  ||||| |||| ||||| ||||||||    
T  35779070 tttaagtttcatgtttgttttcgatagatcctttaagtttttaaggtttcagataagtcatttaagtttcgagtttgtttcagataggtcctttaa 35778975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 13846613 - 13846707
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttta 243  Q
    |||||| || |||||||||| | ||||||| |||||||||||||||||| ||||||||| |||||||||  ||||| |||| ||||| |||||||    
T  13846613 tttaaggttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcttttaagtttcgagtttgtttcagataggtccttta 13846707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 21956040 - 21956138
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagttt-atttcggatagatcctttaagt 246  Q
    ||||||||| |||||||||| | ||||||| |||||||||||||||||| ||||||||| ||||| |||  |||||  |||||||||| ||||||||||    
T  21956040 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaaatttcgagtttgttttcggataggtcctttaagt 21956138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 14336642 - 14336739
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||||| |||||||| | |||| || ||||||||| ||| |||| ||||||||| |||||||||  ||||| |||||||||| ||||||||||    
T  14336642 tttaagttttacgtttgtttcagataggtcctttaagtttttaaagtttcagataggtcctttaagtttcgagtttgtttcggataggtcctttaagt 14336739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 40289783 - 40289686
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||||||| | ||||||| |||||||||||||| |||  |||||||| |||||||||  ||||| |||||||||| || |||||||    
T  40289783 tttaagtttcatgtttgtttcagatagatcctttaagtttctaagatttcggataggtcctttaagttttgagtttgtttcggataggtcatttaagt 40289686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 40998125 - 40998222
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||| ||| |||||||||||| ||||||| |||||||| |||| |||| ||||||||| |||||||||  ||||| |||| ||||| ||||||||||    
T  40998125 tttaaatttcatgtttgttttagatagatcttttaagttactaaagtttcagataggtcctttaagtttcgagtttgtttcagataggtcctttaagt 40998222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 41898478 - 41898381
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||| ||| |||||||||| | ||||||  ||| |||||||||||||| ||||||||| ||||||||| |||||| |||| |||||||| |||||||    
T  41898478 tttaaatttcatgtttgtttcatatagattctttcagtttctaaggtttcagataggtcctttaagtttcaagtttgtttcagatagatcatttaagt 41898381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 50523077 - 50523174
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| | |||||||||| |||| ||||||||||||||| |||||  ||||| |  |||||||||  ||||| |||||||||||||||||||||    
T  50523077 tttaagtttcacgtttgttttagataggtcatttaagtttctatggtttcggatagattctttaagtttcgagtttgtttcggatagatcctttaagt 50523174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 246
Target Start/End: Original strand, 13870390 - 13870480
Alignment:
Q  155 ttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||||||||||||| |||| || ||||| ||| |||||||||||||||||| ||||||||| || ||| ||||| |||| ||||||||||    
T  13870390 ttttatgtttgttttagatagttcctttaaatttttaaggtttaagataggtcctttaagtttgaa-tttgtttcgaataggtcctttaagt 13870480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 53856829 - 53856734
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaa 244  Q
    ||||||||| | |||||||| | ||||||| ||||||||||||| |||| ||||||||| ||||||| |  ||||| |||||||||| ||||||||    
T  53856829 tttaagtttcacgtttgtttcagatagatcctttaagtttctaaagtttcagataggtcctttaagtgtcgagtttgtttcggataggtcctttaa 53856734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 149 - 242
Target Start/End: Complemental strand, 32557413 - 32557322
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||||||| |||||||||| | ||||  ||||||||||| |||||||| ||||||||| |||||||||  ||||| |||||||||| ||||||    
T  32557413 tttaagtttcatgtttgtttcagatag--catttaagtttataaggttttagataggtcctttaagttttgagtttgtttcggataggtccttt 32557322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 238
Target Start/End: Complemental strand, 13864168 - 13864079
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatc 238  Q
    ||||||||||| |||| |||   |||| || |||||||||||||||||| ||||||||| ||||||||| |||||| |||| ||||||||    
T  13864168 tttaagttttaagtttatttcggataggtcctttaagtttctaaggttttagataggtcctttaagtttcaagtttgtttcagatagatc 13864079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 242
Target Start/End: Original strand, 29031282 - 29031375
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||||||| | |||||||||| |||  || |||||||||||||| ||| ||||||||| |||||||||  ||||| ||||||||| |||||||    
T  29031282 tttaagtttcacgtttgttttagataagtcttttaagtttctaagatttcagataggtcctttaagtttcgagtttgtttcggatacatccttt 29031375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 242
Target Start/End: Original strand, 29043401 - 29043494
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||||||| | |||||||||| |||  || |||||||||||||| ||| ||||||||| |||||||||  ||||| ||||||||| |||||||    
T  29043401 tttaagtttcacgtttgttttagataagtcttttaagtttctaagatttcagataggtcctttaagtttcgagtttgtttcggatacatccttt 29043494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 34979497 - 34979594
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| | |||||||| | |||| || |||||||||||||||||| ||||||||| |||||||||  ||||| ||||| |||  ||||||||||    
T  34979497 tttaagtttcacgtttgtttcagataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcgaataagtcctttaagt 34979594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 41898136 - 41898232
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| | |||||||| | || | || |||||||||||||||||| ||||||||  |||||||||  ||||| |||||||||||||||||||||    
T  41898136 tttaagtttcacgtttgtttcagatgggtcctttaagtttctaaggtttcagataggt-ttttaagtttcgagtttgtttcggatagatcctttaagt 41898232  T

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Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 246
Target Start/End: Original strand, 46429729 - 46429830
Alignment:
Q  145 accttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaa 244  Q
    ||||||||| ||| |  ||||||| | |||| ||||||||||||||||||||| ||||| | |||||||||||  ||||| ||||| ||| |||||||||    
T  46429729 accttttaaatttcacttttgtttcagataggtcatttaagtttctaaggttttagatatggcatttaagtttcgagtttgtttcgaatatatcctttaa 46429828  T
Q  245 gt 246  Q
    ||    
T  46429829 gt 46429830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 41898418 - 41898350
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagttt 217  Q
    ||||||||| | |||||||| | |||||||||||||||||||||||||| ||||| ||| |||||||||    
T  41898418 tttaagtttcaagtttgtttcagatagatcatttaagtttctaaggtttcagatatgtcctttaagttt 41898350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 246
Target Start/End: Original strand, 13858877 - 13858975
Alignment:
Q  147 cttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||||||||||||||||||||| ||||||| ||||| ||| ||| |||| | ||||||| ||||||||| || ||| ||||| || | ||||||||||    
T  13858877 cttttaagttttatgtttgttttagatagatcttttaaatttttaaagtttcatataggtcttttaagtttgaa-tttgtttcgaatcggtcctttaagt 13858975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 146 - 217
Target Start/End: Complemental strand, 13870699 - 13870628
Alignment:
Q  146 ccttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagttt 217  Q
    |||||||||||||| |||||||| |  ||| ||||||||||||||||||||| | ||||||| |||||||||    
T  13870699 ccttttaagttttacgtttgtttcatgtaggtcatttaagtttctaaggtttcatataggtcctttaagttt 13870628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 246
Target Start/End: Complemental strand, 27390063 - 27389972
Alignment:
Q  155 ttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||||||| ||| | ||||||| |||||||||||| ||||| ||||| ||  ||||| ||| |||||| |||||||||| ||||||||||    
T  27390063 ttttatgtttatttcagatagatcttttaagtttctatggtttcagataagttctttaaatttgaagtttgtttcggataggtcctttaagt 27389972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 242
Target Start/End: Original strand, 53856544 - 53856639
Alignment:
Q  147 cttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||||||||| | ||||||||| ||| | || |||||||||||||||||| ||||||||| |||||||||  ||||| |||  ||||| ||||||    
T  53856544 cttttaagtttgaagtttgttttgaattggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgttttagataggtccttt 53856639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 14336733 - 14336795
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    |||||||||||||||||| |||||||||||||||||||  ||||| |||| ||||| ||||||    
T  14336733 tttaagtttctaaggtttcagataggtcatttaagtttcgagtttctttcagataggtccttt 14336795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 55358624 - 55358554
Alignment:
Q  147 cttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagttt 217  Q
    ||||||||||| | |||||||| | ||||||| |||||||||||||||||| ||||| ||| |||||||||    
T  55358624 cttttaagtttcacgtttgtttcagatagatcctttaagtttctaaggtttcagatatgtcctttaagttt 55358554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 242
Target Start/End: Complemental strand, 14336925 - 14336832
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||||||| | ||||||||   |||| || |||||||||||||||||| ||||||||| |||||||||  ||||| |||| ||||| ||||||    
T  14336925 tttaagtttgaagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtccttt 14336832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 242
Target Start/End: Original strand, 18598220 - 18598301
Alignment:
Q  161 gtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    |||||||| | |||| || |||||||||||||||||| |||||| |||||||| |||  ||||| |||||||||| ||||||    
T  18598220 gtttgtttcagataggtcctttaagtttctaaggtttcagatagatcatttaaatttcgagtttgtttcggataggtccttt 18598301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 246
Target Start/End: Original strand, 32557084 - 32557169
Alignment:
Q  161 gtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||||||| |||| || ||||| ||||||| |||| | ||| ||| ||||| ||| |||||| |||||||||||||||||||||    
T  32557084 gtttgttttagataggtcctttaaatttctaaagtttcaaataagtcttttaaattttaagtttgtttcggatagatcctttaagt 32557169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 53856486 - 53856583
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| ||||||||||   ||| ||| |||||||||||||||||| ||||| ||| ||||||||| |||||| ||| | || | ||||||||||    
T  53856486 tttaagtttcatgtttgtttcggataaatcttttaagtttctaaggtttcagatatgtcttttaagtttgaagtttgttttgaattggtcctttaagt 53856583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 21956132 - 21956192
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcct 240  Q
    |||||||||||||||||| ||||||||| |||||||||  ||||| |||||||||| ||||    
T  21956132 tttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcggataggtcct 21956192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 25363647 - 25363548
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatca--tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||||||| | |||||||   |||||||||||||||||| |||||| || |||||||||  ||||| ||||| |||  ||||||||||    
T  25363647 tttaagtttcatgtttgtttcagatagatctcctttaagtttctaaggtttcagatagatcctttaagtttcgagtttgtttcgaatatgtcctttaagt 25363548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 242
Target Start/End: Complemental strand, 6112094 - 6111999
Alignment:
Q  147 cttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    |||||||||||   |||||||||  |||| || |||||||||||||||||| ||||||||| |||||||||  ||||| ||||  |||| ||||||    
T  6112094 cttttaagtttggagtttgttttggataggtcttttaagtttctaaggtttcagataggtcgtttaagtttcgagtttgtttcaaataggtccttt 6111999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 13846805 - 13846750
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    |||||||||||||||||| ||||||||| ||||||||| |||||| |||| |||||    
T  13846805 tttaagtttctaaggttttagataggtcctttaagtttcaagtttgtttcagatag 13846750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 29031605 - 29031550
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    |||||||||||||||||| |||||||||||||||||||  ||||| |||| |||||    
T  29031605 tttaagtttctaaggtttcagataggtcatttaagtttcgagtttgtttccgatag 29031550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 29043725 - 29043670
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    |||||||||||||||||| |||||||||||||||||||  ||||| |||| |||||    
T  29043725 tttaagtttctaaggtttcagataggtcatttaagtttcgagtttgtttccgatag 29043670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 3253564 - 3253454
Alignment:
Q  130 aaatatctttccaagaccttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttc 229  Q
    ||||| ||||||| | |||||||||||| |||||||||| |  |||||| ||||| ||||||| |||| |||||| || ||||| |||  ||||| ||||    
T  3253564 aaatacctttccaggtccttttaagtttcatgtttgtttcagttagatcctttaaatttctaatgtttcagatagatcctttaaatttggagtttgtttc 3253465  T
Q  230 ggatagatcct 240  Q
     ||||| ||||    
T  3253464 agataggtcct 3253454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 246
Target Start/End: Complemental strand, 6112141 - 6112055
Alignment:
Q  161 gtttgtttt-aaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||| |||| |||||||||||||| ||| ||||||||| |||||||||  ||||| ||| |||||| || |||||||    
T  6112141 gtttgttttcaaatggatcctttaagtttctaagcttttagataggtcttttaagtttggagtttgttttggataggtcttttaagt 6112055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 147 - 229
Target Start/End: Original strand, 32557130 - 32557212
Alignment:
Q  147 cttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttc 229  Q
    ||||||| ||||| ||||||||   ||||||| |||||||||||||||||| | ||||||| ||||| ||| |||||| ||||    
T  32557130 cttttaaattttaagtttgtttcggatagatcctttaagtttctaaggtttcatataggtcctttaaatttcaagtttgtttc 32557212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 20421078 - 20421175
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| | |||||||| | |||| || |||||||||||||  ||| | ||||||| |||||||||  ||||| |||| ||||| ||||||||||    
T  20421078 tttaagtttaacgtttgtttcagataggtcctttaagtttctaaaatttcatataggtcctttaagtttcgagtttgtttcagataggtcctttaagt 20421175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 242
Target Start/End: Complemental strand, 25154793 - 25154732
Alignment:
Q  181 ttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||||||||||||||| |||||| || ||||||||| |||||| |||| ||||| ||||||    
T  25154793 ttaagtttctaaggtttcagatagatcctttaagtttcaagtttgtttcagataggtccttt 25154732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 242
Target Start/End: Complemental strand, 35778998 - 35778917
Alignment:
Q  161 gtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    |||||||| | |||| || ||||| |||| ||||||| |||||||||||||||||||  ||||| |||| ||||| ||||||    
T  35778998 gtttgtttcagataggtcctttaaatttccaaggtttcagataggtcatttaagtttcgagtttgtttcagataggtccttt 35778917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 20421150 - 20421206
Alignment:
Q  161 gtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagttt 217  Q
    |||||||| | |||| || |||||||||||||||||| ||||||||| |||||||||    
T  20421150 gtttgtttcagataggtcctttaagtttctaaggtttcagataggtcctttaagttt 20421206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 246
Target Start/End: Original strand, 23159089 - 23159149
Alignment:
Q  186 tttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||||||||| ||||| ||| |||||||||  ||||| ||||||||||| |||||||||    
T  23159089 tttctaaggtttcagataagtcctttaagttttgagtttgtttcggatagaccctttaagt 23159149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 25363554 - 25363494
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcct 240  Q
    |||||||||||||||||| ||||||||| |||||||||  ||||| |||| ||||| ||||    
T  25363554 tttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagatagttcct 25363494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 34979588 - 34979640
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcgga 232  Q
    |||||||||||||||||| ||||||||| |||||||||  | |||||||||||    
T  34979588 tttaagtttctaaggtttcagataggtcctttaagtttcgaatttatttcgga 34979640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 237
Target Start/End: Original strand, 46429805 - 46429881
Alignment:
Q  161 gtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagat 237  Q
    ||||||||  |||| ||| |||||||||||||||||| ||||| ||| |||| |||| |||||| |||| |||||||    
T  46429805 gtttgtttcgaatatatcctttaagtttctaaggtttcagatatgtcctttaggtttcaagtttgtttcagatagat 46429881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 41898218 - 41898281
Alignment:
Q  172 atagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    ||||||| |||||||||||||||||| |||||| || |||||||||  ||||| |||| |||||    
T  41898218 atagatcctttaagtttctaaggtttcagatagatcctttaagtttcgagtttgtttcagatag 41898281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 23159112 - 23159198
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    ||||||||||  ||||||||   ||||| | |||||||||||||||||| ||||||||| ||||| |||  ||||| |||| |||||    
T  23159112 tttaagttttgagtttgtttcggatagaccctttaagtttctaaggtttcagataggtcttttaactttcgagtttgtttcagatag 23159198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Complemental strand, 40289701 - 40289655
Alignment:
Q  200 gataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||||||||||||  ||||| |||||||||| ||||||||||    
T  40289701 gataggtcatttaagttttgagtttgtttcggataggtcctttaagt 40289655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 13864168 - 13864131
Alignment:
Q  209 tttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| ||||||||||||||||| ||||||||||    
T  13864168 tttaagttttaagtttatttcggataggtcctttaagt 13864131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 230
Target Start/End: Original strand, 14966103 - 14966184
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcg 230  Q
    ||||||||| | |||||||| | |||| |||||||| |||||||||||| | ||| ||| |||||||||  ||| |||||||    
T  14966103 tttaagtttcacgtttgtttcagataggtcatttaaatttctaaggtttcaaatatgtcttttaagtttcgagtgtatttcg 14966184  T

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Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 234
Target Start/End: Original strand, 15631340 - 15631425
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    |||||||||  ||||| ||| | |||| || ||||| |||||||||||| |||||| || |||||||||  ||||| |||||||||    
T  15631340 tttaagtttcctgtttatttcagataggtcctttaaatttctaaggtttcagatagatcctttaagtttcgagtttgtttcggata 15631425  T

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Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 217
Target Start/End: Original strand, 25154633 - 25154670
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagttt 217  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  25154633 tttaagtttctaaggtttaagatagctcatttaggttt 25154670  T

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Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 234
Target Start/End: Complemental strand, 40289692 - 40289607
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    ||||||||||  ||||||||   |||| || ||||||||||||||| || | ||||||| |||||||||  |||||||||| ||||    
T  40289692 tttaagttttgagtttgtttcggataggtcctttaagtttctaaggattcatataggtcctttaagtttcgagtttatttcagata 40289607  T

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Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 6111869 - 6111937
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagttt 217  Q
    ||||||||||  ||||||||   |||| || |||||||||||||| ||| ||||||||| |||||||||    
T  6111869 tttaagttttgagtttgtttcggataggtcgtttaagtttctaagatttcagataggtcctttaagttt 6111937  T

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Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 35778724 - 35778772
Alignment:
Q  194 gtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    |||| ||||||||| |||||||||  ||||| |||||||||||||||||    
T  35778724 gtttcagataggtcctttaagtttcgagtttgtttcggatagatccttt 35778772  T

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Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 151 - 244
Target Start/End: Original strand, 48517931 - 48518024
Alignment:
Q  151 taagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaa 244  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||||| ||||||||| |||||||||  ||||| |||||||||| ||||||||    
T  48517931 taagtttcatgtttgttttagatagatcctttaagtttctaaggttttagataggtcctttaagtttcgagtttgtttcggataggtcctttaa 48518024  T

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Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 147 - 246
Target Start/End: Original strand, 25147137 - 25147236
Alignment:
Q  147 cttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||||| |||||||||| | |||||||||||||||||||||||||| ||||  ||| ||||||||| |||||| ||||||| || ||||||||||    
T  25147137 cttttaagtttcatgtttgtttcagatagatcatttaagtttctaaggtttcagatgagtcctttaagtttcaagtttgtttcggacagttcctttaagt 25147236  T

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Target: chr3; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 17580153 - 17580056
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||| |||||||||||||||| ||||||  |||||||||||||||||| ||||| ||  |||||||||  |||||||||||||||||| ||||||||    
T  17580153 tttaaattttatgtttgttttagatagattttttaagtttctaaggttttagataagttttttaagtttcgagtttatttcggatagattctttaagt 17580056  T

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Target: chr3; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 29777261 - 29777358
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||| ||||||||||||||| | ||||||| |||||||||||||||||| | ||||||| |||||||||  ||||| |||||||||| ||||||||||    
T  29777261 tttacgttttatgtttgtttcagatagatcctttaagtttctaaggtttcatataggtcctttaagtttggagtttgtttcggataggtcctttaagt 29777358  T

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Target: chr3; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 155 - 246
Target Start/End: Complemental strand, 11871718 - 11871627
Alignment:
Q  155 ttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||||||||||| | ||||||| ||||||||| |||||||| ||||||||| ||||||||| |||||| |||||||||  ||||||||||    
T  11871718 ttttatgtttgtttcagatagatcctttaagtttataaggtttcagataggtcctttaagtttgaagtttgtttcggataactcctttaagt 11871627  T

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Target: chr3; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 13657912 - 13658006
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttta 243  Q
    ||||||||| |||||||||| | |||||||||||||||||||||||||| ||||| ||| |||||||||  ||||| |||| ||||| |||||||    
T  13657912 tttaagtttcatgtttgtttcagatagatcatttaagtttctaaggtttcagataagtcctttaagtttggagtttgtttcagataggtccttta 13658006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 26997214 - 26997311
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||||||| |||||| || |||||||||||| ||||||||||| ||| |||||||||  ||||| |||||||||  ||||||||||    
T  26997214 tttaagtttcatgtttgtttcaaataggtcctttaagtttctagggtttaagatatgtcctttaagtttcgagtttgtttcggatatgtcctttaagt 26997311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 26997556 - 26997459
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||  |||||||||| | ||||||| |||||||||||||||||| ||||||||| ||||||||| | |||| ||| |||||| ||||||||||    
T  26997556 tttaagttccatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttgatgtttgttttggataggtcctttaagt 26997459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 47220573 - 47220476
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||||||| | ||||||| |||||||||||||||||| ||||| ||| ||||||||  |||||| |||||||| | ||||||||||    
T  47220573 tttaagtttcatgtttgtttaagatagatcctttaagtttctaaggttttagatatgtcctttaagttggaagtttgtttcggattggtcctttaagt 47220476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 246
Target Start/End: Complemental strand, 7515732 - 7515633
Alignment:
Q  147 cttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||| ||| | |||||||||||||||||  |||||||||||||||||| ||||| ||| |||||||||  ||||| |||||| ||| ||||||||||    
T  7515732 cttttaaatttcacgtttgttttaaatagattctttaagtttctaaggtttcagatatgtcctttaagtttcgagtttgtttcgggtaggtcctttaagt 7515633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 13712049 - 13712146
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||||||||||||||||| | ||| ||| ||||||||||||| |||| | ||||||| ||||||||  |||||| ||||| |||| ||||||||||    
T  13712049 tttaagttttatgtttgtttcagataaatcctttaagtttctaaagtttcaaataggtcctttaagttggaagtttgtttcgaataggtcctttaagt 13712146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 13712392 - 13712295
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| | |||||||| | |||| || |||||||||||||||||| ||||||||  |||||||||  ||||| |||||||||| ||||||||||    
T  13712392 tttaagtttcacgtttgtttcagataggtcctttaagtttctaaggtttcagataggttctttaagtttcgagtttgtttcggataggtcctttaagt 13712295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 43122950 - 43122853
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||| ||| | ||||||| |||||||||||||||||| ||||| ||| |||||||||  ||||| |||||||||| || |||||||    
T  43122950 tttaagtttcatgtttttttcagatagatcgtttaagtttctaaggtttcagataagtcctttaagtttgtagtttgtttcggataggtcatttaagt 43122853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 52212081 - 52211984
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||||| |   ||||||| |||||||||||||||||| ||||  |||||||||||||  ||||| |||||||||| ||||||||||    
T  52212081 tttaagtttcatgtttgtctgggatagatcctttaagtttctaaggtttcagatgagtcatttaagtttcgagtttgtttcggataggtcctttaagt 52211984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 175 - 246
Target Start/End: Original strand, 31324159 - 31324230
Alignment:
Q  175 gatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||| |||||||||||||||||| |||||||||||||||||||   |||| |||||||||| ||||||||||    
T  31324159 gatcctttaagtttctaaggttttagataggtcatttaagttttgggtttgtttcggataggtcctttaagt 31324230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 242
Target Start/End: Complemental strand, 48382327 - 48382232
Alignment:
Q  147 cttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||||||||| || ||||||| | |||||||||||||||||||||||||| ||||| ||| ||||| |||  ||||  |||||||||| ||||||    
T  48382327 cttttaagtttcatatttgtttcagatagatcatttaagtttctaaggttttagataagtcctttaactttcgagttagtttcggataggtccttt 48382232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 234
Target Start/End: Complemental strand, 50293918 - 50293835
Alignment:
Q  151 taagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    |||||||||||||||||| | ||||||| ||||||||| |||||||| ||||||||| |||||||||  ||||| ||| |||||    
T  50293918 taagttttatgtttgtttcagatagatcctttaagtttttaaggtttcagataggtcctttaagtttggagtttgttttggata 50293835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 234
Target Start/End: Original strand, 8112543 - 8112629
Alignment:
Q  148 ttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    |||||||||| |||||||||||| ||||||||||||||||| |||||||| |||| ||   ||||||||| |||||| |||| ||||    
T  8112543 ttttaagtttcatgtttgttttagatagatcatttaagtttttaaggttttagattggatctttaagtttcaagtttgtttcagata 8112629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 24097952 - 24098018
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||||||||||||||| ||||| ||| |||||||||  |||||||||||||||| ||||||||||    
T  24097952 tttaagtttctaaggtttcagataagtcctttaagtttggagtttatttcggataggtcctttaagt 24098018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 7515416 - 7515513
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| | |||||||| | |||| || ||||||||||||| |||| ||||| ||| |||||||||  ||||| |||||||||| ||||||||||    
T  7515416 tttaagtttcacgtttgtttcagataggtcctttaagtttctaaagtttcagataagtcctttaagttttgagtttgtttcggataggtcctttaagt 7515513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 10820238 - 10820335
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| | |||||||| | ||||||| |||||||||||||||||| ||||| ||  |||||||||  ||||| |||||||||| || |||||||    
T  10820238 tttaagtttcacgtttgtttcagatagatcctttaagtttctaaggtttcagatatgttctttaagtttcgagtttgtttcggataggtcttttaagt 10820335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 242
Target Start/End: Complemental strand, 10820521 - 10820428
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||||||| | |||||||||  |||| || |||||||||||||||||| ||||| ||| ||||||||| |||||| |||| ||||| ||||||    
T  10820521 tttaagtttgaagtttgttttggataggtcctttaagtttctaaggtttcagataagtcctttaagtttcaagtttgtttcagataggtccttt 10820428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 11218449 - 11218352
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||| ||| | ||||||| |||||||||||||||||| | | | ||| ||||||||| |||||| |||| ||||| ||||||||||    
T  11218449 tttaagtttcatgtttatttcagatagatcctttaagtttctaaggtttcaaacatgtcctttaagtttcaagtttgtttcagataggtcctttaagt 11218352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 242
Target Start/End: Original strand, 17579762 - 17579855
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||||||| |||||||||| | |||| |  |||||||||||||||||| ||||||||  |||||||||  ||||| |||||||||| ||||||    
T  17579762 tttaagtttcatgtttgtttcagataggttctttaagtttctaaggtttcagataggtgctttaagtttcgagtttgtttcggataggtccttt 17579855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 234
Target Start/End: Complemental strand, 26997496 - 26997411
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    ||||||||| |||||||||||  |||| || |||||||||||||||||| | |||||||||||||||||  ||||| |||| ||||    
T  26997496 tttaagtttgatgtttgttttggataggtcctttaagtttctaaggtttcaaataggtcatttaagttttgagtttgtttcagata 26997411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 33623443 - 33623346
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| | || ||||||| |||| || |||||||||||||||||| |||||| || |||||||||  ||||| |||||||||  ||||||||||    
T  33623443 tttaagtttcacgtctgttttagataggtcctttaagtttctaaggtttcagatagatcctttaagtttcgagtttgtttcggatatgtcctttaagt 33623346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 11218079 - 11218172
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||||||||||||||||| | |||| || |||||||||||||||||| ||||||||| |    ||||  ||||| ||||||||| |||||||||||    
T  11218079 tttaagttttatgtttgtttcagataggtcctttaagtttctaaggttttagataggtctt----gtttcgagtttgtttcggataaatcctttaagt 11218172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 245
Target Start/End: Complemental strand, 13658256 - 13658160
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaag 245  Q
    ||||| ||| |||||||||| | |||  || |||||||||||||||||| ||||||||| |||||||||  ||||| |||||||||  |||||||||    
T  13658256 tttaaatttaatgtttgtttcatataagtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcggataagtcctttaag 13658160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 54924168 - 54924075
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaa 244  Q
    |||||||||||||||||||||| |||  |  |||||||||||||||||| ||||||||  |||||||||  ||||| ||||| |||||| ||||||    
T  54924168 tttaagttttatgtttgttttagatacct--tttaagtttctaaggtttcagataggttctttaagtttcgagtttgtttcgaatagattctttaa 54924075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 33623099 - 33623197
Alignment:
Q  149 tttaagttttatgtttgttttaa-atagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||| |||| | ||| ||| |||||||||||||||||| ||||||||| |||| ||||  ||||| ||||| |||| ||||||||||    
T  33623099 tttaagtttcatgttttttttcagataaatcctttaagtttctaaggtttcagataggtcttttacgtttgtagtttgtttcgaataggtcctttaagt 33623197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 52211990 - 52211932
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatc 238  Q
    |||||||||||||||||| ||||||||| |||||||||  ||||| |||||||||||||    
T  52211990 tttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcggatagatc 52211932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 242
Target Start/End: Original strand, 31324193 - 31324286
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||||||||  ||||||||   |||| || |||||||||||||||||| ||||||||| |||||||||  ||||| |||| ||||| ||||||    
T  31324193 tttaagttttgggtttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtccttt 31324286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 241
Target Start/End: Complemental strand, 25147488 - 25147408
Alignment:
Q  161 gtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctt 241  Q
    |||||||| | |||| || ||||||||| |||| ||| ||||||||| |||||||||  ||||| ||||||||||||||||    
T  25147488 gtttgtttcagataggtcctttaagtttttaagatttcagataggtcttttaagtttcgagtttgtttcggatagatcctt 25147408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 29777513 - 29777458
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    |||||||||||||||||| |||||||||||||||||||  ||||| |||| |||||    
T  29777513 tttaagtttctaaggttttagataggtcatttaagtttcgagtttgtttcagatag 29777458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 242
Target Start/End: Complemental strand, 33623352 - 33623290
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    |||||||||||||| ||| |||||||||||||||||||  ||||| |||| ||||| ||||||    
T  33623352 tttaagtttctaagatttcagataggtcatttaagtttcgagtttgtttcagataggtccttt 33623290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 242
Target Start/End: Complemental strand, 43122867 - 43122797
Alignment:
Q  172 atagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    |||| ||||||||||||||||||||| ||||||||| |||||||||  ||||| ||||  |||| ||||||    
T  43122867 ataggtcatttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcatataggtccttt 43122797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 242
Target Start/End: Original strand, 13712121 - 13712202
Alignment:
Q  161 gtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||||||  ||||| || |||||||||||||||||| |||||| || |||||||||  ||||| |||| ||||| ||||||    
T  13712121 gtttgtttcgaataggtcctttaagtttctaaggtttcagatagatcctttaagtttcgagtttgtttcagataggtccttt 13712202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 242
Target Start/End: Original strand, 33623172 - 33623253
Alignment:
Q  161 gtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||||||  ||||| || |||||||||||||||||| ||||||||| |||||||||  ||||| ||||  |||| ||||||    
T  33623172 gtttgtttcgaataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcatataggtccttt 33623253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 230
Target Start/End: Original strand, 54923756 - 54923837
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcg 230  Q
    ||||||||||| |||||||||||||||||| ||||| ||| ||| |||| | ||| ||  ||||||||| |||||| |||||    
T  54923756 tttaagttttacgtttgttttaaatagatcctttaaatttttaaagtttcacataagttctttaagttttaagtttgtttcg 54923837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 229
Target Start/End: Complemental strand, 1772050 - 1771971
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttc 229  Q
    ||||||||| | |||||||| | |||| || |||||||||||||||||| ||||| ||| ||||||||| |||||| ||||    
T  1772050 tttaagtttcacgtttgtttcatataggtcctttaagtttctaaggtttcagata-gtcctttaagtttcaagtttgtttc 1771971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 8112896 - 8112804
Alignment:
Q  150 ttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    |||||||| | |||||||||| |||| || ||||| |||||||||||| ||||| ||| || ||||||  ||||| ||| |||||| ||||||    
T  8112896 ttaagtttcacgtttgttttagataggtcctttaaatttctaaggtttcagataagtccttaaagtttcgagtttgttttggataggtccttt 8112804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 24098236 - 24098196
Alignment:
Q  177 tcatttaagtttctaaggtttaagataggtcatttaagttt 217  Q
    ||||||||||||||||||||| ||||||||||||| |||||    
T  24098236 tcatttaagtttctaaggtttcagataggtcatttcagttt 24098196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 235
Target Start/End: Complemental strand, 29231134 - 29231050
Alignment:
Q  151 taagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    ||||||| | |||||||| | |||| |  ||||||||||||| |||| |||||||||||||| ||||  |||||||||| |||||    
T  29231134 taagtttgaagtttgtttcagataggttctttaagtttctaaagtttcagataggtcatttatgtttcgagtttatttcagatag 29231050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 29777559 - 29777507
Alignment:
Q  194 gtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||| |||||||||||||||||||  ||||| ||||||||| |||||||||||    
T  29777559 gtttcagataggtcatttaagtttcgagtttgtttcggatatatcctttaagt 29777507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 17580062 - 17580007
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    |||||||||||||||||| ||||||||| |||||||||  ||||| |||| |||||    
T  17580062 tttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagatag 17580007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 234
Target Start/End: Original strand, 48381910 - 48381996
Alignment:
Q  147 cttttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    ||||||||||| | |||||||| | ||||||| || |||||| |||||||| |||||| ||||||||||||  ||||| |||| ||||    
T  48381910 cttttaagtttcacgtttgtttcagatagatcctt-aagtttttaaggttttagatagatcatttaagtttcgagtttgtttcagata 48381996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 7515476 - 7515562
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    ||||||||||  ||||||||   |||| || ||||||||||||||||||  |||||||| |||||||||  ||||| |||| |||||    
T  7515476 tttaagttttgagtttgtttcggataggtcctttaagtttctaaggtttcggataggtcctttaagtttcgagtttgtttcagatag 7515562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 11218166 - 11218228
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||||||||||||||||  |||| |||||||||||||  ||||| |||| ||||| ||||||    
T  11218166 tttaagtttctaaggtttcggataagtcatttaagtttcgagtttgtttcagataggtccttt 11218228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 235
Target Start/End: Complemental strand, 11218358 - 11218272
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    ||||||||| | |||||||| | |||  || |||||||||||||||||| |||||| || ||||| |||  |||||||||| |||||    
T  11218358 tttaagtttcaagtttgtttcagataagtcctttaagtttctaaggtttcagatagatcctttaaatttcgagtttatttcagatag 11218272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 24098012 - 24098074
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    |||||||||||||||||| ||||||||| |||||||||  ||||| ||||  |||| ||||||    
T  24098012 tttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcatataggtccttt 24098074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 216
Target Start/End: Original strand, 37148194 - 37148260
Alignment:
Q  150 ttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtt 216  Q
    |||||||| ||||||||   | |||| || |||||||||||||||||| ||||||||| ||||||||    
T  37148194 ttaagtttcatgtttgtaacagataggtcctttaagtttctaaggtttcagataggtcctttaagtt 37148260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 50293829 - 50293775
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    |||||||||||||||||| ||||||||| |||||||||  ||||| |||| ||||    
T  50293829 tttaagtttctaaggtttcagataggtcctttaagttttgagtttgtttcagata 50293775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 217
Target Start/End: Original strand, 11871503 - 11871540
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagttt 217  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  11871503 tttaagtttctaaggtttcagataggtcttttaagttt 11871540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 217
Target Start/End: Complemental strand, 24098173 - 24098136
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagttt 217  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  24098173 tttaagtttctaaggtttcagataggtcctttaagttt 24098136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 54; Significance: 4e-22; HSPs: 4)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 202297 - 202394
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||||||| ||||||||| |||||||||||||| ||| ||||||||| |||||||||  ||||| |||||||||| || |||||||    
T  202297 tttaagtttcatgtttgtttcaaatagatcctttaagtttctaagatttcagataggtcctttaagtttggagtttgtttcggataggtcttttaagt 202394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 202388 - 202450
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    |||||||||||||||||| ||||||||| ||||||||| |||||| |||| ||||| ||||||    
T  202388 tttaagtttctaaggtttcagataggtcctttaagtttcaagtttgtttcagatagctccttt 202450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 242
Target Start/End: Complemental strand, 202557 - 202487
Alignment:
Q  172 atagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||||| |||||||||||||||||| ||||||||| |||||||||  ||||| |||| ||||| ||||||    
T  202557 atagatcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtccttt 202487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 202609 - 202543
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||| ||||||| |||| ||||||||| |||||||||  ||||| |||||||||||||||||||||    
T  202609 tttaaatttctaaagtttcagataggtcctttaagtttcgagtttgtttcggatagatcctttaagt 202543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 4e-22; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 5985793 - 5985890
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| | |||||||| | ||||||| |||||||||||||||||| ||||| ||| ||||||||| |||||| |||||||||| ||||||||||    
T  5985793 tttaagtttcacgtttgtttcagatagatcctttaagtttctaaggtttcagatatgtcctttaagttttaagtttgtttcggataggtcctttaagt 5985890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 29134927 - 29135024
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||||||| | ||||||| ||||||||| |||||||| | ||| ||| |||||||||  ||||| |||||||||||||||||||||    
T  29134927 tttaagtttcatgtttgtttcagatagatcctttaagtttttaaggtttcaaatatgtcctttaagtttcgagtttgtttcggatagatcctttaagt 29135024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 4799646 - 4799578
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagttt 217  Q
    ||||||||| |||||||||| | |||||||||||||||||||||||||| ||||| ||| |||||||||    
T  4799646 tttaagtttcatgtttgtttcagatagatcatttaagtttctaaggtttcagatatgtcctttaagttt 4799578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 217
Target Start/End: Original strand, 33033177 - 33033243
Alignment:
Q  151 taagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagttt 217  Q
    ||||||| | |||||||||| |||| ||||||||||||||||||||| | |||||||||||||||||    
T  33033177 taagtttcacgtttgttttagataggtcatttaagtttctaaggttttacataggtcatttaagttt 33033243  T

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Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 14942268 - 14942365
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| | |||||||||| ||||||| ||||| |||||||||||| ||||||||| |||||| ||  ||||| ||||| |||  ||||||||||    
T  14942268 tttaagtttcacgtttgttttagatagatcctttaaatttctaaggtttcagataggtcctttaagattcgagtttgtttcgtatatgtcctttaagt 14942365  T

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Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 242
Target Start/End: Complemental strand, 24012597 - 24012504
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||||||| | |||||||| | ||||||| |||||||||||||||||| ||||||||| ||||| |||  ||||| |||| ||||| ||||||    
T  24012597 tttaagtttcacgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaaatttcgagtttgtttcagataggtccttt 24012504  T

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Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 242
Target Start/End: Original strand, 29135010 - 29135080
Alignment:
Q  172 atagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    ||||||| ||||||||||||| |||| ||||||||||||||| ||| |||||| |||| ||||| ||||||    
T  29135010 atagatcctttaagtttctaaagtttcagataggtcatttaaatttcaagtttttttcagataggtccttt 29135080  T

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Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 234
Target Start/End: Original strand, 4799334 - 4799419
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    ||||||||| | |||||||| | ||||||| ||||||||||||| |||| ||||| ||| |||||||||  ||||| |||||||||    
T  4799334 tttaagtttcacgtttgtttcagatagatcctttaagtttctaaagtttcagatatgtcctttaagttttgagtttgtttcggata 4799419  T

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Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 5985853 - 5985921
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagttt 217  Q
    ||||||||||| ||||||||   |||| || |||||||||||||||||| ||||||||| |||||||||    
T  5985853 tttaagttttaagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaagttt 5985921  T

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Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 9049846 - 9049782
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaa 213  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||||||  |||||||| |||||    
T  9049846 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcggataggtcctttaa 9049782  T

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Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 7858641 - 7858727
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    ||||||||| | ||||||||   |||| || |||||||||||||||||| ||||  ||||||||||||| |||||| |||| |||||    
T  7858641 tttaagtttgaagtttgtttcggatagttcctttaagtttctaaggtttcagatgagtcatttaagtttcaagtttgtttcagatag 7858727  T

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Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 33033220 - 33033271
Alignment:
Q  165 gttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagttt 217  Q
    |||||| |||| ||||||||||||||||||||| ||||||||| |||||||||    
T  33033220 gttttacataggtcatttaagtttctaaggttttagataggtc-tttaagttt 33033271  T

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Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 242
Target Start/End: Complemental strand, 4799586 - 4799524
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    |||||||||||||||||| ||||||||| ||||| |||  ||||| |||| ||||| ||||||    
T  4799586 tttaagtttctaaggtttcagataggtcctttaaatttcgagtttgtttcagataggtccttt 4799524  T

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Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 7858832 - 7858779
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggata 234  Q
    |||||||||||||||||| ||||||||| |||||||||| ||||| |||| ||||    
T  7858832 tttaagtttctaaggtttcagataggtc-tttaagtttagagtttgtttctgata 7858779  T

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Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 33040993 - 33040935
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatc 238  Q
    |||||||||||||||||| |||||| || |||||||||  ||||| |||| ||||||||    
T  33040993 tttaagtttctaaggtttcagatagttcttttaagtttcgagtttgtttcagatagatc 33040935  T

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Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 4997662 - 4997727
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaag 214  Q
    ||||||||| | |||||||||||||| ||| ||||||||| |||||||| | |||| || ||||||    
T  4997662 tttaagtttcacgtttgttttaaataaatcctttaagtttttaaggtttcatatagatcttttaag 4997727  T

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Target: scaffold0182 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 161 - 242
Target Start/End: Complemental strand, 23476 - 23395
Alignment:
Q  161 gtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    |||||||| ||||||||| |||||||||||||| ||| ||||||||| |||||||||  ||||| |||||||||| ||||||    
T  23476 gtttgtttcaaatagatcctttaagtttctaagatttcagataggtcctttaagtttggagtttgtttcggataggtccttt 23395  T

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Target: scaffold0182; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 22214 - 22311
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| || ||||||| | ||||||| ||||||||||||||  || |||||| || ||||||| |  ||||| |||||||||| ||||||||||    
T  22214 tttaagtttcatatttgtttcagatagatcctttaagtttctaagtcttcagatagttcctttaagtatggagtttgtttcggataggtcctttaagt 22311  T

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Target: scaffold0220 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 3)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 22135 - 22038
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    ||||||||| |||||| | ||| || || | ||||||||||||| |||| |||||||||||||||||||  ||||| ||||| |||| ||||||||||    
T  22135 tttaagtttcatgtttatcttagattgaccctttaagtttctaaagtttcagataggtcatttaagtttcgagtttgtttcgtataggtcctttaagt 22038  T

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Target: scaffold0220; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 21832 - 21918
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    ||||||||| | ||||||||   |||| || |||||||||||| ||||| |||||||||||||||||||  ||||| ||||||||||    
T  21832 tttaagtttcacgtttgtttcggataggtcctttaagtttctacggtttcagataggtcatttaagtttcgagtttgtttcggatag 21918  T

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Target: scaffold0220; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 242
Target Start/End: Complemental strand, 22044 - 21982
Alignment:
Q  180 tttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatccttt 242  Q
    |||||||||||||||||| |||||| || ||||| |||  ||||| |||| ||||||||||||    
T  22044 tttaagtttctaaggtttcagatagatcctttaaatttcgagtttgtttcagatagatccttt 21982  T

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Target: scaffold0179 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 235
Target Start/End: Complemental strand, 32502 - 32422
Alignment:
Q  154 gttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatag 235  Q
    |||| |||||||||| | ||||||| |||||||||||||||||| ||||| ||||||||||||| |||||| |||| |||||    
T  32502 gtttcatgtttgtttcagatagatc-tttaagtttctaaggtttcagatatgtcatttaagtttgaagtttgtttcagatag 32422  T

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Target: scaffold0051 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 60809 - 60712
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaagt 246  Q
    |||||||||||| ||||||| | ||||||||||||||||||||||||||  |||||||| |||| ||||  ||||| ||||  |||  ||||||||||    
T  60809 tttaagttttatatttgtttcagatagatcatttaagtttctaaggtttcggataggtcctttatgtttggagtttgtttcaaataagtcctttaagt 60712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 245
Target Start/End: Original strand, 60491 - 60587
Alignment:
Q  149 tttaagttttatgtttgttttaaatagatcatttaagtttctaaggtttaagataggtcatttaagtttaaagtttatttcggatagatcctttaag 245  Q
    ||||||||| | |||||||| | |||| |  |||||||||||||||||| ||||||||| |||||||||  ||||| ||||| |||  |||||||||    
T  60491 tttaagtttcacgtttgtttcagataggtactttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcgaatatgtcctttaag 60587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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