View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0061_low_6 (Length: 266)
Name: NF0061_low_6
Description: NF0061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0061_low_6 |
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Alignment Details
Target: chr4 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 13 - 247
Target Start/End: Original strand, 1869349 - 1869582
Alignment:
| Q |
13 |
ctaaccgtcatactgaaacttatgtgggtttcaccactttacatgaaatacatttctaaattgtagtatccacactaaatttcatgcgataagaaagtga |
112 |
Q |
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| T |
1869349 |
ctaaccgtcatgttgaaacttatgtgggtctcatcactttacgtgggatacatttctaaattatagtatccacactaaatttcatgcgataagaaagtga |
1869448 |
T |
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| Q |
113 |
ctgttagagagtgttaagaaagagagtgtttccgatattcctatataaatagccgttatcaatccgcatatgttttttaaaagaaaaatgagactctttt |
212 |
Q |
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|| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1869449 |
ctattagagagtgttaagaaagagagtgtttccgatattcctatataaa-agccgttatcaatccgcatatgttttttaaaagaaaaatgagactctttt |
1869547 |
T |
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| Q |
213 |
agagcattatgtaccttacaaatgatgatgatgtc |
247 |
Q |
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| T |
1869548 |
agagcattatgtaccttacaaatgatggtgatgtc |
1869582 |
T |
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